data_BEO
#
_chem_comp.id BEO
_chem_comp.name "BUTENOIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C4 H6 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 86.089
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BEO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1LFO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BEO C1 C1 C 0 1 N N N N N N 33.238 37.042 26.196 0.015 0.000 -0.996 C1 BEO 1
BEO O1 O1 O 0 1 N N N N N N 33.475 36.268 27.119 1.215 0.000 -1.188 O1 BEO 2
BEO O2 O2 O 0 1 N N N N N N 32.251 37.762 26.239 -0.835 0.000 -2.042 O2 BEO 3
BEO C2 C2 C 0 1 N N N N N N 34.165 37.100 24.986 -0.508 0.000 0.376 C2 BEO 4
BEO C3 C3 C 0 1 N N N N N N 35.215 36.005 24.993 0.331 0.000 1.409 C3 BEO 5
BEO C4 C4 C 0 1 N N N N N N 35.575 35.605 23.574 -0.205 0.000 2.817 C4 BEO 6
BEO HO2 HO2 H 0 1 N N N N N N 32.067 38.360 25.524 -0.490 0.000 -2.945 HO2 BEO 7
BEO H2 H2 H 0 1 N N N N N N 34.084 37.856 24.187 -1.574 0.000 0.547 H2 BEO 8
BEO H3 H3 H 0 1 N N N N N N 35.654 35.561 25.902 1.397 0.000 1.238 H3 BEO 9
BEO H41 1H4 H 0 1 N N N N N N 36.346 34.800 23.579 0.625 0.000 3.523 H41 BEO 10
BEO H42 2H4 H 0 1 N N N N N N 34.674 35.312 22.984 -0.815 0.890 2.973 H42 BEO 11
BEO H43 3H4 H 0 1 N N N N N N 35.894 36.482 22.964 -0.815 -0.890 2.973 H43 BEO 12
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BEO C1 O1 DOUB N N 1
BEO C1 O2 SING N N 2
BEO C1 C2 SING N N 3
BEO O2 HO2 SING N N 4
BEO C2 C3 DOUB N E 5
BEO C2 H2 SING N N 6
BEO C3 C4 SING N N 7
BEO C3 H3 SING N N 8
BEO C4 H41 SING N N 9
BEO C4 H42 SING N N 10
BEO C4 H43 SING N N 11
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BEO SMILES ACDLabs 10.04 O=C(O)/C=C/C
BEO SMILES_CANONICAL CACTVS 3.341 C/C=C/C(O)=O
BEO SMILES CACTVS 3.341 CC=CC(O)=O
BEO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC=CC(=O)O
BEO SMILES "OpenEye OEToolkits" 1.5.0 CC=CC(=O)O
BEO InChI InChI 1.03 InChI=1S/C4H6O2/c1-2-3-4(5)6/h2-3H,1H3,(H,5,6)/b3-2+
BEO InChIKey InChI 1.03 LDHQCZJRKDOVOX-NSCUHMNNSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BEO "SYSTEMATIC NAME" ACDLabs 10.04 "(2E)-but-2-enoic acid"
BEO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "but-2-enoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BEO 'Create component' 1999-07-08 PDBJ
BEO 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id BEO
_pdbe_chem_comp_drugbank_details.drugbank_id DB02074
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Butenoic Acid'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 107-93-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id BEO
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02074
_pdbe_chem_comp_drugbank_classification.parent 'Straight chain fatty acids'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Fatty Acyls'
_pdbe_chem_comp_drugbank_classification.superclass 'Lipids and lipid-like molecules'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as straight chain fatty acids. These are fatty acids with a straight aliphatic chain.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
BEO C1 C 5.104 -0.090 1
BEO O1 O 3.805 0.660 2
BEO O2 O 5.104 -1.590 3
BEO C2 C 6.404 0.660 4
BEO C3 C 7.702 -0.090 5
BEO C4 C 9.002 0.660 6
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
BEO C1 O1 DOUBLE NONE 1
BEO C1 O2 SINGLE NONE 2
BEO C1 C2 SINGLE ENDUPRIGHT 3
BEO C2 C3 DOUBLE NONE 4
BEO C3 C4 SINGLE ENDUPRIGHT 5
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id BEO
_pdbe_chem_comp_rdkit_properties.exactmw 86.037
_pdbe_chem_comp_rdkit_properties.amw 86.090
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 6
_pdbe_chem_comp_rdkit_properties.NumAtoms 12
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.250
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 44.617
_pdbe_chem_comp_rdkit_properties.tpsa 37.300
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.647
_pdbe_chem_comp_rdkit_properties.CrippenMR 22.450
_pdbe_chem_comp_rdkit_properties.chi0v 2.816
_pdbe_chem_comp_rdkit_properties.chi1v 1.158
_pdbe_chem_comp_rdkit_properties.chi2v 0.165
_pdbe_chem_comp_rdkit_properties.chi3v 0.165
_pdbe_chem_comp_rdkit_properties.chi4v 0.051
_pdbe_chem_comp_rdkit_properties.chi0n 8.816
_pdbe_chem_comp_rdkit_properties.chi1n 4.066
_pdbe_chem_comp_rdkit_properties.chi2n 0.165
_pdbe_chem_comp_rdkit_properties.chi3n 0.165
_pdbe_chem_comp_rdkit_properties.chi4n 0.051
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.790
_pdbe_chem_comp_rdkit_properties.kappa1 0.886
_pdbe_chem_comp_rdkit_properties.kappa2 2.448
_pdbe_chem_comp_rdkit_properties.kappa3 3.210
_pdbe_chem_comp_rdkit_properties.Phi 0.361
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
BEO UniChem ChEMBL CHEMBL1213528
BEO UniChem DrugBank DB02074
BEO UniChem PDBe BEO
BEO UniChem 'KEGG LIGAND' C01771
BEO UniChem ChEBI 41131
BEO UniChem ZINC ZINC000000901132
BEO UniChem eMolecules 478849
BEO UniChem fdasrs YW5WZZ4O5Q
BEO UniChem SureChEMBL SCHEMBL22033
BEO UniChem HMDB HMDB0010720
BEO UniChem 'PubChem TPHARMA' 15170392
BEO UniChem PubChem 637090
BEO UniChem NMRShiftDB 10016780
BEO UniChem ACTor 107-93-7
BEO UniChem ACTor 15105-17-6
BEO UniChem ACTor 3724-65-0
BEO UniChem ACTor 39382-27-9
BEO UniChem Nikkaji J367K
BEO UniChem BindingDb 50427207
BEO UniChem 'EPA CompTox Dashboard' DTXSID30880973
BEO UniChem LipidMaps LMFA01030195
BEO UniChem MetaboLights MTBLC41131
BEO UniChem BRENDA 101628
BEO UniChem BRENDA 114829
BEO UniChem BRENDA 145258
BEO UniChem BRENDA 18541
BEO UniChem BRENDA 207290
BEO UniChem BRENDA 2836
BEO UniChem BRENDA 29205
BEO UniChem BRENDA 31014
BEO UniChem BRENDA 48880
BEO UniChem BRENDA 7172
BEO UniChem BRENDA 93308
BEO UniChem ChemicalBook CB6145402
BEO UniChem ChemicalBook CB9145403
BEO UniChem MedChemExpress HY-Y1644
BEO UniChem 'Probes And Drugs' PD008576
BEO UniChem Nikkaji J109.464E
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
BEO C1 -1.777 -0.269 0.089 ETKDGv3 1
BEO O1 -2.698 -0.962 -0.419 ETKDGv3 2
BEO O2 -2.077 0.647 1.095 ETKDGv3 3
BEO C2 -0.396 -0.438 -0.389 ETKDGv3 4
BEO C3 0.620 0.268 0.112 ETKDGv3 5
BEO C4 2.013 0.074 -0.394 ETKDGv3 6
BEO HO2 -3.027 0.764 1.424 ETKDGv3 7
BEO H2 -0.208 -1.163 -1.173 ETKDGv3 8
BEO H3 0.452 0.997 0.897 ETKDGv3 9
BEO H41 2.334 -0.976 -0.228 ETKDGv3 10
BEO H42 2.058 0.307 -1.479 ETKDGv3 11
BEO H43 2.707 0.750 0.148 ETKDGv3 12
#