data_BOB
#
_chem_comp.id BOB
_chem_comp.name
"(S)-2-amino-5-((R)-1-(carboxymethylamino)-3-((3S,4R)-1,4-dihydroxynonan-3-ylthio)-1-oxopropan-2-ylamino)-5-oxopentanoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H35 N3 O8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms L-gamma-glutamyl-S-[(1S,2R)-2-hydroxy-1-(2-hydroxyethyl)heptyl]-L-cysteinylglycine
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2009-08-12
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 465.562
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BOB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3IK7
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BOB C1 C1 C 0 1 N N N N N N 25.070 51.326 62.167 6.947 2.675 -0.405 C1 BOB 1
BOB N1 N1 N 0 1 N N N N N N 26.148 49.779 60.630 5.575 2.296 -2.374 N1 BOB 2
BOB C2 C2 C 0 1 N N N N N N 29.680 50.370 68.043 0.986 -2.503 -0.340 C2 BOB 3
BOB N2 N2 N 0 1 N N N N N N 28.603 51.209 66.079 1.407 -0.117 -0.214 N2 BOB 4
BOB O2 O2 O 0 1 N N N N N N 28.524 50.364 68.721 1.641 -2.464 -1.360 O2 BOB 5
BOB C3 C3 C 0 1 N N N N N N 31.106 47.328 69.520 0.025 -6.058 -0.000 C3 BOB 6
BOB N3 N3 N 0 1 N N N N N N 30.631 49.537 68.465 0.471 -3.674 0.085 N3 BOB 7
BOB O11 O11 O 0 1 N N N N N N 25.183 52.194 61.288 7.875 2.243 -1.048 O11 BOB 8
BOB O12 O12 O 0 1 N N N N N N 24.300 51.461 63.158 7.171 3.282 0.771 O12 BOB 9
BOB O31 O31 O 0 1 N N N N N N 31.435 46.757 70.593 0.102 -7.289 -0.530 O31 BOB 10
BOB O32 O32 O 0 1 N N N N N N 31.281 46.836 68.384 -0.588 -5.879 1.026 O32 BOB 11
BOB C40 C40 C 0 1 N N S N N N 31.087 55.064 65.412 -2.836 0.771 1.371 C40 BOB 12
BOB C42 C42 C 0 1 N N R N N N 32.258 54.238 64.813 -3.209 1.099 -0.076 C42 BOB 13
BOB C43 C43 C 0 1 N N N N N N 33.692 54.589 65.248 -4.723 1.291 -0.182 C43 BOB 14
BOB C44 C44 C 0 1 N N N N N N 34.103 54.094 66.641 -5.110 1.496 -1.648 C44 BOB 15
BOB C45 C45 C 0 1 N N N N N N 35.407 53.295 66.649 -6.624 1.688 -1.754 C45 BOB 16
BOB C46 C46 C 0 1 N N N N N N 36.619 54.101 67.126 -7.011 1.893 -3.220 C46 BOB 17
BOB C47 C47 C 0 1 N N N N N N 37.740 54.060 66.108 -8.525 2.086 -3.326 C47 BOB 18
BOB C54 C54 C 0 1 N N N N N N 31.418 56.123 66.498 -3.269 1.921 2.282 C54 BOB 19
BOB C55 C55 C 0 1 N N N N N N 31.673 57.537 65.937 -3.020 1.536 3.742 C55 BOB 20
BOB O56 O56 O 0 1 N N N N N N 31.533 58.581 66.931 -3.533 2.559 4.598 O56 BOB 21
BOB O60 O60 O 0 1 N N N N N N 32.027 52.840 65.038 -2.546 2.300 -0.478 O60 BOB 22
BOB CA1 CA1 C 0 1 N N S N N N 25.916 50.093 62.030 5.540 2.536 -0.925 CA1 BOB 23
BOB CA2 CA2 C 0 1 N N R N N N 29.861 51.268 66.838 0.749 -1.244 0.452 CA2 BOB 24
BOB CA3 CA3 C 0 1 N N N N N N 30.439 48.669 69.629 0.702 -4.899 -0.685 CA3 BOB 25
BOB CB1 CB1 C 0 1 N N N N N N 27.264 50.318 62.718 4.852 1.359 -0.230 CB1 BOB 26
BOB CB2 CB2 C 0 1 N N N N N N 30.161 52.731 67.241 -0.755 -0.974 0.543 CB2 BOB 27
BOB CD1 CD1 C 0 1 N N N N N N 28.525 50.868 64.797 2.710 0.136 0.020 CD1 BOB 28
BOB OE1 OE1 O 0 1 N N N N N N 29.629 50.594 64.095 3.338 -0.569 0.781 OE1 BOB 29
BOB CG1 CG1 C 0 1 N N N N N N 27.157 50.807 64.162 3.387 1.295 -0.665 CG1 BOB 30
BOB SG2 SG2 S 0 1 N N N N N N 29.803 53.958 65.995 -1.041 0.542 1.496 SG2 BOB 31
BOB HN1 HN1 H 0 1 N N N N N N 26.712 48.956 60.561 5.966 3.088 -2.862 HN1 BOB 32
BOB HN1A HN1A H 0 0 N N N N N N 25.272 49.621 60.174 6.084 1.452 -2.588 HN1A BOB 33
BOB HN2 HN2 H 0 1 N N N N N N 27.755 51.439 66.556 0.905 0.447 -0.823 HN2 BOB 34
BOB HN3 HN3 H 0 1 N N N N N N 31.501 49.504 67.973 -0.053 -3.705 0.901 HN3 BOB 35
BOB HO12 HO12 H 0 0 N N N N N N 23.855 52.299 63.102 8.091 3.351 1.062 HO12 BOB 36
BOB HO31 HO31 H 0 0 N N N N N N 31.827 45.914 70.396 -0.348 -8.000 -0.055 HO31 BOB 37
BOB H40 H40 H 0 1 N N N N N N 30.755 55.683 64.565 -3.341 -0.146 1.677 H40 BOB 38
BOB H42 H42 H 0 1 N N N N N N 32.236 54.515 63.749 -2.900 0.279 -0.726 H42 BOB 39
BOB H43 H43 H 0 1 N N N N N N 34.379 54.133 64.520 -5.229 0.408 0.208 H43 BOB 40
BOB H43A H43A H 0 0 N N N N N N 33.778 55.686 65.249 -5.019 2.166 0.397 H43A BOB 41
BOB H44 H44 H 0 1 N N N N N N 34.236 54.972 67.290 -4.603 2.379 -2.038 H44 BOB 42
BOB H44A H44A H 0 0 N N N N N N 33.302 53.444 67.023 -4.813 0.621 -2.228 H44A BOB 43
BOB H45 H45 H 0 1 N N N N N N 35.278 52.438 67.327 -7.130 0.805 -1.364 H45 BOB 44
BOB H45A H45A H 0 0 N N N N N N 35.606 52.955 65.622 -6.920 2.563 -1.174 H45A BOB 45
BOB H46 H46 H 0 1 N N N N N N 36.314 55.147 67.278 -6.504 2.776 -3.610 H46 BOB 46
BOB H46A H46A H 0 0 N N N N N N 36.981 53.673 68.072 -6.714 1.019 -3.799 H46A BOB 47
BOB H47 H47 H 0 1 N N N N N N 38.594 54.646 66.478 -9.031 1.203 -2.936 H47 BOB 48
BOB H47A H47A H 0 0 N N N N N N 38.053 53.017 65.949 -8.821 2.960 -2.746 H47A BOB 49
BOB H47B H47B H 0 0 N N N N N N 37.387 54.486 65.157 -8.800 2.231 -4.370 H47B BOB 50
BOB H54 H54 H 0 1 N N N N N N 30.564 56.180 67.189 -2.693 2.814 2.039 H54 BOB 51
BOB H54A H54A H 0 0 N N N N N N 32.327 55.797 67.025 -4.330 2.122 2.135 H54A BOB 52
BOB H55 H55 H 0 1 N N N N N N 32.700 57.571 65.545 -3.523 0.594 3.960 H55 BOB 53
BOB H55A H55A H 0 0 N N N N N N 30.944 57.726 65.135 -1.949 1.424 3.911 H55A BOB 54
BOB HO56 HO56 H 0 0 N N N N N N 31.701 59.426 66.530 -3.410 2.381 5.541 HO56 BOB 55
BOB HO60 HO60 H 0 0 N N N N N N 32.744 52.337 64.671 -2.774 3.072 0.057 HO60 BOB 56
BOB HA1 HA1 H 0 1 N N N N N N 25.383 49.254 62.501 4.986 3.452 -0.722 HA1 BOB 57
BOB HA2 HA2 H 0 1 N N N N N N 30.720 50.924 66.243 1.158 -1.362 1.455 HA2 BOB 58
BOB HA3 HA3 H 0 1 N N N N N N 29.359 48.500 69.749 1.773 -5.091 -0.750 HA3 BOB 59
BOB HA3A HA3A H 0 0 N N N N N N 30.858 49.184 70.506 0.293 -4.780 -1.688 HA3A BOB 60
BOB HB1 HB1 H 0 1 N N N N N N 27.805 49.360 62.724 5.354 0.431 -0.505 HB1 BOB 61
BOB HB1A HB1A H 0 0 N N N N N N 27.815 51.077 62.143 4.905 1.495 0.850 HB1A BOB 62
BOB HB2 HB2 H 0 1 N N N N N N 29.546 52.965 68.123 -1.164 -0.856 -0.460 HB2 BOB 63
BOB HB2A HB2A H 0 0 N N N N N N 31.234 52.797 67.473 -1.245 -1.813 1.038 HB2A BOB 64
BOB HG1 HG1 H 0 1 N N N N N N 26.709 51.811 64.171 2.885 2.223 -0.391 HG1 BOB 65
BOB HG1A HG1A H 0 0 N N N N N N 26.524 50.112 64.733 3.335 1.160 -1.746 HG1A BOB 66
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BOB O11 C1 DOUB N N 1
BOB CA1 C1 SING N N 2
BOB C1 O12 SING N N 3
BOB N1 CA1 SING N N 4
BOB N1 HN1 SING N N 5
BOB N1 HN1A SING N N 6
BOB CA2 C2 SING N N 7
BOB C2 N3 SING N N 8
BOB C2 O2 DOUB N N 9
BOB CD1 N2 SING N N 10
BOB N2 CA2 SING N N 11
BOB N2 HN2 SING N N 12
BOB O32 C3 DOUB N N 13
BOB C3 CA3 SING N N 14
BOB C3 O31 SING N N 15
BOB N3 CA3 SING N N 16
BOB N3 HN3 SING N N 17
BOB O12 HO12 SING N N 18
BOB O31 HO31 SING N N 19
BOB C42 C40 SING N N 20
BOB C40 SG2 SING N N 21
BOB C40 C54 SING N N 22
BOB C40 H40 SING N N 23
BOB C42 O60 SING N N 24
BOB C42 C43 SING N N 25
BOB C42 H42 SING N N 26
BOB C43 C44 SING N N 27
BOB C43 H43 SING N N 28
BOB C43 H43A SING N N 29
BOB C44 C45 SING N N 30
BOB C44 H44 SING N N 31
BOB C44 H44A SING N N 32
BOB C45 C46 SING N N 33
BOB C45 H45 SING N N 34
BOB C45 H45A SING N N 35
BOB C47 C46 SING N N 36
BOB C46 H46 SING N N 37
BOB C46 H46A SING N N 38
BOB C47 H47 SING N N 39
BOB C47 H47A SING N N 40
BOB C47 H47B SING N N 41
BOB C55 C54 SING N N 42
BOB C54 H54 SING N N 43
BOB C54 H54A SING N N 44
BOB C55 O56 SING N N 45
BOB C55 H55 SING N N 46
BOB C55 H55A SING N N 47
BOB O56 HO56 SING N N 48
BOB O60 HO60 SING N N 49
BOB CA1 CB1 SING N N 50
BOB CA1 HA1 SING N N 51
BOB CA2 CB2 SING N N 52
BOB CA2 HA2 SING N N 53
BOB CA3 HA3 SING N N 54
BOB CA3 HA3A SING N N 55
BOB CB1 CG1 SING N N 56
BOB CB1 HB1 SING N N 57
BOB CB1 HB1A SING N N 58
BOB SG2 CB2 SING N N 59
BOB CB2 HB2 SING N N 60
BOB CB2 HB2A SING N N 61
BOB OE1 CD1 DOUB N N 62
BOB CG1 CD1 SING N N 63
BOB CG1 HG1 SING N N 64
BOB CG1 HG1A SING N N 65
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BOB SMILES ACDLabs 11.02 O=C(NC(C(=O)NCC(=O)O)CSC(C(O)CCCCC)CCO)CCC(C(=O)O)N
BOB SMILES_CANONICAL CACTVS 3.352 CCCCC[C@@H](O)[C@H](CCO)SC[C@H](NC(=O)CC[C@H](N)C(O)=O)C(=O)NCC(O)=O
BOB SMILES CACTVS 3.352 CCCCC[CH](O)[CH](CCO)SC[CH](NC(=O)CC[CH](N)C(O)=O)C(=O)NCC(O)=O
BOB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 CCCCC[C@H]([C@H](CCO)SC[C@@H](C(=O)NCC(=O)O)NC(=O)CC[C@@H](C(=O)O)N)O
BOB SMILES "OpenEye OEToolkits" 1.7.0 CCCCCC(C(CCO)SCC(C(=O)NCC(=O)O)NC(=O)CCC(C(=O)O)N)O
BOB InChI InChI 1.03 InChI=1S/C19H35N3O8S/c1-2-3-4-5-14(24)15(8-9-23)31-11-13(18(28)21-10-17(26)27)22-16(25)7-6-12(20)19(29)30/h12-15,23-24H,2-11,20H2,1H3,(H,21,28)(H,22,25)(H,26,27)(H,29,30)/t12-,13-,14+,15-/m0/s1
BOB InChIKey InChI 1.03 CLEVVMDJDMEQKG-XQLPTFJDSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BOB "SYSTEMATIC NAME" ACDLabs 11.02 L-gamma-glutamyl-S-[(3S,4R)-1,4-dihydroxynonan-3-yl]-L-cysteinylglycine
BOB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S)-2-azanyl-5-[[(2R)-1-(carboxymethylamino)-3-[(3S,4R)-1,4-dihydroxynonan-3-yl]sulfanyl-1-oxo-propan-2-yl]amino]-5-oxo-pentanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BOB 'Create component' 2009-08-12 RCSB
BOB 'Modify descriptor' 2011-06-04 RCSB
BOB 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id BOB
_pdbx_chem_comp_synonyms.name L-gamma-glutamyl-S-[(1S,2R)-2-hydroxy-1-(2-hydroxyethyl)heptyl]-L-cysteinylglycine
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id BOB
_pdbe_chem_comp_synonyms.name 'L-gamma-glutamyl-S-[(1S,2R)-2-hydroxy-1-(2-hydroxyethyl)heptyl]-L-cysteinylglycine'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
BOB C1 C 5.104 3.893 1
BOB N1 N 6.404 6.143 2
BOB C2 C 14.198 4.643 3
BOB N2 N 11.600 4.643 4
BOB O2 O 14.198 6.143 5
BOB C3 C 18.095 3.893 6
BOB N3 N 15.497 3.893 7
BOB O11 O 3.805 4.643 8
BOB O12 O 5.104 2.393 9
BOB O31 O 18.095 2.393 10
BOB O32 O 19.394 4.643 11
BOB C40 C 11.600 0.142 12
BOB C42 C 10.301 -0.608 13
BOB C43 C 10.301 -2.107 14
BOB C44 C 9.002 -2.857 15
BOB C45 C 9.002 -4.357 16
BOB C46 C 7.702 -5.107 17
BOB C47 C 7.702 -6.607 18
BOB C54 C 12.899 -0.608 19
BOB C55 C 12.899 -2.107 20
BOB O56 O 14.198 -2.857 21
BOB O60 O 9.002 0.142 22
BOB CA1 C 6.404 4.643 23
BOB CA2 C 12.899 3.893 24
BOB CA3 C 16.796 4.643 25
BOB CB1 C 7.702 3.893 26
BOB CB2 C 12.899 2.393 27
BOB CD1 C 10.301 3.893 28
BOB OE1 O 10.301 2.393 29
BOB CG1 C 9.002 4.643 30
BOB SG2 S 11.600 1.643 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
BOB O11 C1 DOUBLE NONE 1
BOB CA1 C1 SINGLE NONE 2
BOB C1 O12 SINGLE NONE 3
BOB CA1 N1 SINGLE BEGINWEDGE 4
BOB CA2 C2 SINGLE NONE 5
BOB C2 N3 SINGLE NONE 6
BOB C2 O2 DOUBLE NONE 7
BOB CD1 N2 SINGLE NONE 8
BOB N2 CA2 SINGLE NONE 9
BOB O32 C3 DOUBLE NONE 10
BOB C3 CA3 SINGLE NONE 11
BOB C3 O31 SINGLE NONE 12
BOB N3 CA3 SINGLE NONE 13
BOB C42 C40 SINGLE NONE 14
BOB C40 SG2 SINGLE NONE 15
BOB C40 C54 SINGLE BEGINWEDGE 16
BOB C42 O60 SINGLE BEGINWEDGE 17
BOB C42 C43 SINGLE NONE 18
BOB C43 C44 SINGLE NONE 19
BOB C44 C45 SINGLE NONE 20
BOB C45 C46 SINGLE NONE 21
BOB C47 C46 SINGLE NONE 22
BOB C55 C54 SINGLE NONE 23
BOB C55 O56 SINGLE NONE 24
BOB CA1 CB1 SINGLE NONE 25
BOB CA2 CB2 SINGLE BEGINDASH 26
BOB CB1 CG1 SINGLE NONE 27
BOB SG2 CB2 SINGLE NONE 28
BOB OE1 CD1 DOUBLE NONE 29
BOB CG1 CD1 SINGLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
BOB amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
BOB peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
BOB N2 F1 1
BOB CD1 F1 1
BOB OE1 F1 1
BOB CG1 F1 1
BOB N3 F1 2
BOB C2 F1 2
BOB O2 F1 2
BOB CA2 F1 2
BOB O2 F2 1
BOB C2 F2 1
BOB CA2 F2 1
BOB N2 F2 1
BOB O11 F2 2
BOB C1 F2 2
BOB CA1 F2 2
BOB N1 F2 2
BOB O32 F2 3
BOB C3 F2 3
BOB CA3 F2 3
BOB N3 F2 3
#
_pdbe_chem_comp_rdkit_properties.comp_id BOB
_pdbe_chem_comp_rdkit_properties.exactmw 465.214
_pdbe_chem_comp_rdkit_properties.amw 465.569
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 22
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 66
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.789
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 235.447
_pdbe_chem_comp_rdkit_properties.tpsa 199.280
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.710
_pdbe_chem_comp_rdkit_properties.CrippenMR 115.519
_pdbe_chem_comp_rdkit_properties.chi0v 15.332
_pdbe_chem_comp_rdkit_properties.chi1v 7.726
_pdbe_chem_comp_rdkit_properties.chi2v 2.854
_pdbe_chem_comp_rdkit_properties.chi3v 2.854
_pdbe_chem_comp_rdkit_properties.chi4v 1.575
_pdbe_chem_comp_rdkit_properties.chi0n 49.516
_pdbe_chem_comp_rdkit_properties.chi1n 23.831
_pdbe_chem_comp_rdkit_properties.chi2n 2.067
_pdbe_chem_comp_rdkit_properties.chi3n 2.067
_pdbe_chem_comp_rdkit_properties.chi4n 1.007
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.890
_pdbe_chem_comp_rdkit_properties.kappa1 5.775
_pdbe_chem_comp_rdkit_properties.kappa2 16.759
_pdbe_chem_comp_rdkit_properties.kappa3 13.915
_pdbe_chem_comp_rdkit_properties.Phi 3.122
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
BOB UniChem PDBe BOB
BOB UniChem ZINC ZINC000058661127
BOB UniChem PubChem 46173031
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
BOB C1 -5.773 1.492 4.914 ETKDGv3 1
BOB N1 -6.150 -0.750 4.031 ETKDGv3 2
BOB C2 -0.983 2.602 -0.304 ETKDGv3 3
BOB N2 -1.894 1.884 1.856 ETKDGv3 4
BOB O2 -0.845 3.827 -0.569 ETKDGv3 5
BOB C3 -2.138 1.044 -3.559 ETKDGv3 6
BOB N3 -1.471 1.709 -1.317 ETKDGv3 7
BOB O11 -5.374 2.198 5.879 ETKDGv3 8
BOB O12 -6.728 1.997 4.036 ETKDGv3 9
BOB O31 -1.136 0.273 -4.139 ETKDGv3 10
BOB O32 -3.349 0.753 -3.749 ETKDGv3 11
BOB C40 1.993 0.960 -1.078 ETKDGv3 12
BOB C42 2.875 -0.301 -1.310 ETKDGv3 13
BOB C43 2.404 -1.511 -0.463 ETKDGv3 14
BOB C44 3.183 -2.807 -0.751 ETKDGv3 15
BOB C45 4.664 -2.709 -0.344 ETKDGv3 16
BOB C46 5.374 -4.071 -0.374 ETKDGv3 17
BOB C47 5.551 -4.613 -1.792 ETKDGv3 18
BOB C54 2.487 2.198 -1.864 ETKDGv3 19
BOB C55 2.234 2.141 -3.379 ETKDGv3 20
BOB O56 3.356 1.624 -4.040 ETKDGv3 21
BOB O60 2.894 -0.655 -2.670 ETKDGv3 22
BOB CA1 -5.180 0.127 4.689 ETKDGv3 23
BOB CA2 -0.661 2.121 1.092 ETKDGv3 24
BOB CA3 -1.773 2.187 -2.666 ETKDGv3 25
BOB CB1 -3.875 0.217 3.872 ETKDGv3 26
BOB CB2 0.301 0.917 1.137 ETKDGv3 27
BOB CD1 -2.780 0.762 1.702 ETKDGv3 28
BOB OE1 -2.453 -0.232 1.001 ETKDGv3 29
BOB CG1 -4.083 0.736 2.441 ETKDGv3 30
BOB SG2 2.011 1.423 0.707 ETKDGv3 31
BOB HN1 -5.731 -1.705 3.953 ETKDGv3 32
BOB HN1A -6.982 -0.850 4.658 ETKDGv3 33
BOB HN2 -2.169 2.620 2.547 ETKDGv3 34
BOB HN3 -1.574 0.694 -1.103 ETKDGv3 35
BOB HO12 -7.120 2.922 4.170 ETKDGv3 36
BOB HO31 -1.365 -0.517 -4.731 ETKDGv3 37
BOB H40 0.960 0.734 -1.407 ETKDGv3 38
BOB H42 3.913 -0.044 -1.008 ETKDGv3 39
BOB H43 2.493 -1.285 0.621 ETKDGv3 40
BOB H43A 1.329 -1.703 -0.673 ETKDGv3 41
BOB H44 3.098 -3.063 -1.828 ETKDGv3 42
BOB H44A 2.703 -3.627 -0.174 ETKDGv3 43
BOB H45 5.200 -2.003 -1.014 ETKDGv3 44
BOB H45A 4.730 -2.310 0.692 ETKDGv3 45
BOB H46 6.381 -3.952 0.082 ETKDGv3 46
BOB H46A 4.813 -4.809 0.240 ETKDGv3 47
BOB H47 6.166 -5.537 -1.760 ETKDGv3 48
BOB H47A 4.568 -4.867 -2.241 ETKDGv3 49
BOB H47B 6.068 -3.866 -2.432 ETKDGv3 50
BOB H54 1.939 3.086 -1.480 ETKDGv3 51
BOB H54A 3.566 2.377 -1.662 ETKDGv3 52
BOB H55 1.334 1.529 -3.609 ETKDGv3 53
BOB H55A 2.046 3.173 -3.750 ETKDGv3 54
BOB HO56 3.118 1.590 -5.003 ETKDGv3 55
BOB HO60 1.964 -0.888 -2.931 ETKDGv3 56
BOB HA1 -4.928 -0.307 5.684 ETKDGv3 57
BOB HA2 -0.129 2.955 1.603 ETKDGv3 58
BOB HA3 -2.611 2.915 -2.622 ETKDGv3 59
BOB HA3A -0.882 2.701 -3.086 ETKDGv3 60
BOB HB1 -3.414 -0.795 3.828 ETKDGv3 61
BOB HB1A -3.159 0.882 4.405 ETKDGv3 62
BOB HB2 0.335 0.537 2.180 ETKDGv3 63
BOB HB2A -0.037 0.075 0.504 ETKDGv3 64
BOB HG1 -4.799 0.081 1.897 ETKDGv3 65
BOB HG1A -4.506 1.762 2.461 ETKDGv3 66
#