data_BX3
#
_chem_comp.id BX3
_chem_comp.name "(+)-2-[4-[(-1-ACETIMIDOYL-4-PIPERIDINYL)OXY]-3-(7-AMIDINO-2-NAPHTHYL)PROPIONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H30 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms BX5633
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 458.552
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BX3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1MTV
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BX3 N1 N1 N 0 1 N N N N N N 46.382 18.230 54.974 -3.900 0.988 -7.005 N1 BX3 1
BX3 C2 C2 C 0 1 N N N N N N 45.587 17.937 54.001 -2.885 0.503 -7.661 C2 BX3 2
BX3 N3 N3 N 0 1 N N N N N N 45.120 16.771 53.755 -2.918 0.448 -9.038 N3 BX3 3
BX3 C4 C4 C 0 1 Y N N N N N 45.194 19.070 53.082 -1.696 0.011 -6.929 C4 BX3 4
BX3 C5 C5 C 0 1 Y N N N N N 44.657 18.831 51.796 -0.604 -0.509 -7.643 C5 BX3 5
BX3 C6 C6 C 0 1 Y N N N N N 44.257 19.894 50.975 0.497 -0.966 -6.994 C6 BX3 6
BX3 C7 C7 C 0 1 Y N N N N N 44.406 21.222 51.430 0.556 -0.921 -5.590 C7 BX3 7
BX3 C8 C8 C 0 1 Y N N N N N 44.948 21.480 52.715 -0.539 -0.396 -4.858 C8 BX3 8
BX3 C9 C9 C 0 1 Y N N N N N 45.346 20.401 53.538 -1.669 0.070 -5.547 C9 BX3 9
BX3 C10 C10 C 0 1 Y N N N N N 44.020 22.309 50.627 1.685 -1.387 -4.896 C10 BX3 10
BX3 C11 C11 C 0 1 Y N N N N N 44.184 23.624 51.089 1.713 -1.331 -3.536 C11 BX3 11
BX3 C12 C12 C 0 1 Y N N N N N 45.087 22.799 53.159 -0.476 -0.359 -3.454 C12 BX3 12
BX3 C13 C13 C 0 1 Y N N N N N 44.729 23.872 52.353 0.636 -0.815 -2.817 C13 BX3 13
BX3 C14 C14 C 0 1 N N N N N N 44.925 25.275 52.948 0.702 -0.768 -1.312 C14 BX3 14
BX3 C15 C15 C 0 1 N N S N N N 43.764 26.281 52.630 1.310 0.564 -0.870 C15 BX3 15
BX3 C16 C16 C 0 1 Y N N N N N 42.440 25.895 53.280 1.377 0.611 0.634 C16 BX3 16
BX3 C17 C17 C 0 1 Y N N N N N 42.322 25.477 54.614 0.703 1.602 1.323 C17 BX3 17
BX3 C18 C18 C 0 1 Y N N N N N 41.057 25.096 55.114 0.762 1.647 2.703 C18 BX3 18
BX3 C19 C19 C 0 1 Y N N N N N 39.907 25.163 54.262 1.499 0.698 3.396 C19 BX3 19
BX3 C20 C20 C 0 1 Y N N N N N 40.047 25.588 52.919 2.178 -0.291 2.701 C20 BX3 20
BX3 C21 C21 C 0 1 Y N N N N N 41.311 25.939 52.450 2.111 -0.336 1.322 C21 BX3 21
BX3 C22 C22 C 0 1 N N N N N N 44.087 27.726 52.956 2.700 0.695 -1.439 C22 BX3 22
BX3 O23 O23 O 0 1 N N N N N N 43.423 28.603 52.338 3.647 0.815 -0.698 O23 BX3 23
BX3 O24 O24 O 0 1 N N N N N N 45.001 27.997 53.771 2.885 0.679 -2.768 O24 BX3 24
BX3 O25 O25 O 0 1 N N N N N N 38.606 24.801 54.667 1.559 0.740 4.753 O25 BX3 25
BX3 C26 C26 C 0 1 N N N N N N 38.208 24.873 56.022 0.434 0.004 5.239 C26 BX3 26
BX3 C27 C27 C 0 1 N N N N N N 37.854 26.354 56.279 -0.778 0.931 5.337 C27 BX3 27
BX3 N28 N28 N 0 1 N N N N N N 36.400 25.559 58.147 -1.638 -0.536 7.086 N28 BX3 28
BX3 C29 C29 C 0 1 N N N N N N 36.638 24.138 57.776 -0.436 -1.380 7.126 C29 BX3 29
BX3 C30 C30 C 0 1 N N N N N N 36.917 24.045 56.249 0.757 -0.563 6.623 C30 BX3 30
BX3 C31 C31 C 0 1 N N N N N N 35.287 25.929 58.764 -2.416 -0.375 8.202 C31 BX3 31
BX3 N32 N32 N 0 1 N N N N N N 34.220 25.209 58.907 -3.534 0.270 8.123 N32 BX3 32
BX3 C33 C33 C 0 1 N N N N N N 35.110 27.313 59.394 -1.970 -0.951 9.521 C33 BX3 33
BX3 C34 C34 C 0 1 N N N N N N 37.486 26.511 57.784 -1.993 0.126 5.824 C34 BX3 34
BX3 HN1 HN1 H 0 1 N N N N N N 46.896 17.801 54.204 -4.679 1.310 -7.484 HN1 BX3 35
BX3 HN31 1HN3 H 0 0 N N N N N N 44.491 16.539 52.985 -3.697 0.770 -9.518 HN31 BX3 36
BX3 HN32 2HN3 H 0 0 N N N N N N 44.665 16.451 54.610 -2.162 0.087 -9.527 HN32 BX3 37
BX3 H5 H5 H 0 1 N N N N N N 44.548 17.797 51.426 -0.642 -0.547 -8.722 H5 BX3 38
BX3 H6 H6 H 0 1 N N N N N N 43.828 19.687 49.979 1.329 -1.364 -7.557 H6 BX3 39
BX3 H9 H9 H 0 1 N N N N N N 45.774 20.597 54.535 -2.510 0.472 -5.002 H9 BX3 40
BX3 H10 H10 H 0 1 N N N N N N 43.586 22.129 49.629 2.528 -1.789 -5.439 H10 BX3 41
BX3 H11 H11 H 0 1 N N N N N N 43.881 24.471 50.451 2.582 -1.690 -3.007 H11 BX3 42
BX3 H12 H12 H 0 1 N N N N N N 45.487 22.997 54.167 -1.305 0.033 -2.884 H12 BX3 43
BX3 H141 1H14 H 0 0 N N N N N N 45.093 25.210 54.048 1.322 -1.588 -0.950 H141 BX3 44
BX3 H142 2H14 H 0 0 N N N N N N 45.905 25.699 52.629 -0.302 -0.863 -0.901 H142 BX3 45
BX3 H15 H15 H 0 1 N N N N N N 43.652 26.204 51.523 0.690 1.384 -1.233 H15 BX3 46
BX3 H17 H17 H 0 1 N N N N N N 43.213 25.448 55.262 0.130 2.341 0.783 H17 BX3 47
BX3 H18 H18 H 0 1 N N N N N N 40.968 24.750 56.157 0.236 2.422 3.241 H18 BX3 48
BX3 H20 H20 H 0 1 N N N N N N 39.177 25.645 52.242 2.752 -1.032 3.239 H20 BX3 49
BX3 H21 H21 H 0 1 N N N N N N 41.420 26.258 51.399 2.635 -1.110 0.781 H21 BX3 50
BX3 HO4 HO4 H 0 1 N N N N N N 45.203 28.902 53.975 3.777 0.764 -3.133 HO4 BX3 51
BX3 H26 H26 H 0 1 N N N N N N 39.014 24.486 56.688 0.212 -0.813 4.554 H26 BX3 52
BX3 H271 1H27 H 0 0 N N N N N N 38.662 27.051 55.958 -0.566 1.736 6.041 H271 BX3 53
BX3 H272 2H27 H 0 0 N N N N N N 37.054 26.729 55.599 -0.993 1.354 4.355 H272 BX3 54
BX3 H291 1H29 H 0 0 N N N N N N 37.449 23.673 58.382 -0.252 -1.704 8.151 H291 BX3 55
BX3 H292 2H29 H 0 0 N N N N N N 35.801 23.472 58.094 -0.579 -2.251 6.486 H292 BX3 56
BX3 H301 1H30 H 0 0 N N N N N N 36.058 24.365 55.613 0.955 0.255 7.315 H301 BX3 57
BX3 H302 2H30 H 0 0 N N N N N N 36.978 23.000 55.864 1.635 -1.205 6.558 H302 BX3 58
BX3 HN3 HN3 H 0 1 N N N N N N 33.308 25.653 58.794 -3.788 0.700 7.292 HN3 BX3 59
BX3 H331 1H33 H 0 0 N N N N N N 34.173 27.624 59.913 -2.712 -0.724 10.286 H331 BX3 60
BX3 H332 2H33 H 0 0 N N N N N N 35.954 27.467 60.105 -1.863 -2.032 9.428 H332 BX3 61
BX3 H333 3H33 H 0 0 N N N N N N 35.322 28.070 58.604 -1.012 -0.514 9.803 H333 BX3 62
BX3 H341 1H34 H 0 0 N N N N N N 38.376 26.399 58.445 -2.261 -0.619 5.075 H341 BX3 63
BX3 H342 2H34 H 0 0 N N N N N N 37.221 27.563 58.041 -2.834 0.799 5.990 H342 BX3 64
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BX3 N1 C2 DOUB N N 1
BX3 N1 HN1 SING N N 2
BX3 C2 N3 SING N N 3
BX3 C2 C4 SING N N 4
BX3 N3 HN31 SING N N 5
BX3 N3 HN32 SING N N 6
BX3 C4 C5 DOUB Y N 7
BX3 C4 C9 SING Y N 8
BX3 C5 C6 SING Y N 9
BX3 C5 H5 SING N N 10
BX3 C6 C7 DOUB Y N 11
BX3 C6 H6 SING N N 12
BX3 C7 C8 SING Y N 13
BX3 C7 C10 SING Y N 14
BX3 C8 C9 DOUB Y N 15
BX3 C8 C12 SING Y N 16
BX3 C9 H9 SING N N 17
BX3 C10 C11 DOUB Y N 18
BX3 C10 H10 SING N N 19
BX3 C11 C13 SING Y N 20
BX3 C11 H11 SING N N 21
BX3 C12 C13 DOUB Y N 22
BX3 C12 H12 SING N N 23
BX3 C13 C14 SING N N 24
BX3 C14 C15 SING N N 25
BX3 C14 H141 SING N N 26
BX3 C14 H142 SING N N 27
BX3 C15 C16 SING N N 28
BX3 C15 C22 SING N N 29
BX3 C15 H15 SING N N 30
BX3 C16 C17 DOUB Y N 31
BX3 C16 C21 SING Y N 32
BX3 C17 C18 SING Y N 33
BX3 C17 H17 SING N N 34
BX3 C18 C19 DOUB Y N 35
BX3 C18 H18 SING N N 36
BX3 C19 C20 SING Y N 37
BX3 C19 O25 SING N N 38
BX3 C20 C21 DOUB Y N 39
BX3 C20 H20 SING N N 40
BX3 C21 H21 SING N N 41
BX3 C22 O23 DOUB N N 42
BX3 C22 O24 SING N N 43
BX3 O24 HO4 SING N N 44
BX3 O25 C26 SING N N 45
BX3 C26 C27 SING N N 46
BX3 C26 C30 SING N N 47
BX3 C26 H26 SING N N 48
BX3 C27 C34 SING N N 49
BX3 C27 H271 SING N N 50
BX3 C27 H272 SING N N 51
BX3 N28 C29 SING N N 52
BX3 N28 C31 SING N N 53
BX3 N28 C34 SING N N 54
BX3 C29 C30 SING N N 55
BX3 C29 H291 SING N N 56
BX3 C29 H292 SING N N 57
BX3 C30 H301 SING N N 58
BX3 C30 H302 SING N N 59
BX3 C31 N32 DOUB N N 60
BX3 C31 C33 SING N N 61
BX3 N32 HN3 SING N N 62
BX3 C33 H331 SING N N 63
BX3 C33 H332 SING N N 64
BX3 C33 H333 SING N N 65
BX3 C34 H341 SING N N 66
BX3 C34 H342 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BX3 SMILES ACDLabs 10.04 O=C(O)C(c2ccc(OC1CCN(C(=[N@H])C)CC1)cc2)Cc4cc3cc(C(=[N@H])N)ccc3cc4
BX3 SMILES_CANONICAL CACTVS 3.341 CC(=N)N1CCC(CC1)Oc2ccc(cc2)[C@H](Cc3ccc4ccc(cc4c3)C(N)=N)C(O)=O
BX3 SMILES CACTVS 3.341 CC(=N)N1CCC(CC1)Oc2ccc(cc2)[CH](Cc3ccc4ccc(cc4c3)C(N)=N)C(O)=O
BX3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC(=N)N1CCC(CC1)Oc2ccc(cc2)[C@H](Cc3ccc4ccc(cc4c3)C(=N)N)C(=O)O
BX3 SMILES "OpenEye OEToolkits" 1.5.0 CC(=N)N1CCC(CC1)Oc2ccc(cc2)C(Cc3ccc4ccc(cc4c3)C(=N)N)C(=O)O
BX3 InChI InChI 1.03 InChI=1S/C27H30N4O3/c1-17(28)31-12-10-24(11-13-31)34-23-8-6-20(7-9-23)25(27(32)33)15-18-2-3-19-4-5-21(26(29)30)16-22(19)14-18/h2-9,14,16,24-25,28H,10-13,15H2,1H3,(H3,29,30)(H,32,33)/b28-17+/t25-/m0/s1
BX3 InChIKey InChI 1.03 FZLDAJVXFYWRCX-ISAGNRBTSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BX3 "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-3-(7-carbamimidoylnaphthalen-2-yl)-2-[4-({1-[(1E)-ethanimidoyl]piperidin-4-yl}oxy)phenyl]propanoic acid"
BX3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-3-(7-carbamimidoylnaphthalen-2-yl)-2-[4-(1-ethanimidoylpiperidin-4-yl)oxyphenyl]propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BX3 'Create component' 1999-07-08 EBI
BX3 'Modify descriptor' 2011-06-04 RCSB
BX3 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id BX3
_pdbx_chem_comp_synonyms.name BX5633
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id BX3
_pdbe_chem_comp_synonyms.name BX5633
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
BX3 N1 N 9.629 -1.934 1
BX3 C2 C 9.628 -0.434 2
BX3 N3 N 10.927 0.318 3
BX3 C4 C 8.329 0.315 4
BX3 C5 C 8.327 1.816 5
BX3 C6 C 7.028 2.564 6
BX3 C7 C 5.729 1.813 7
BX3 C8 C 5.731 0.313 8
BX3 C9 C 7.030 -0.435 9
BX3 C10 C 4.430 2.562 10
BX3 C11 C 3.131 1.811 11
BX3 C12 C 4.432 -0.437 12
BX3 C13 C 3.133 0.311 13
BX3 C14 C 1.834 -0.440 14
BX3 C15 C 0.535 0.309 15
BX3 C16 C -0.764 -0.442 16
BX3 C17 C -2.063 0.307 17
BX3 C18 C -3.362 -0.444 18
BX3 C19 C -3.361 -1.944 19
BX3 C20 C -2.061 -2.693 20
BX3 C21 C -0.763 -1.942 21
BX3 C22 C 0.533 1.809 22
BX3 O23 O 1.832 2.560 23
BX3 O24 O -0.766 2.558 24
BX3 O25 O -4.659 -2.695 25
BX3 C26 C -5.959 -1.946 26
BX3 C27 C -5.960 -0.446 27
BX3 N28 N -8.558 -0.448 28
BX3 C29 C -8.557 -1.948 29
BX3 C30 C -7.257 -2.697 30
BX3 C31 C -9.857 0.301 31
BX3 N32 N -9.859 1.801 32
BX3 C33 C -11.156 -0.450 33
BX3 C34 C -7.259 0.303 34
BX3 HN1 H 10.929 -2.682 35
BX3 HN3 H -11.158 2.550 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
BX3 N1 C2 DOUBLE NONE 1
BX3 C2 N3 SINGLE ENDDOWNRIGHT 2
BX3 C2 C4 SINGLE ENDUPRIGHT 3
BX3 C4 C5 DOUBLE NONE 4
BX3 C4 C9 SINGLE NONE 5
BX3 C5 C6 SINGLE NONE 6
BX3 C6 C7 DOUBLE NONE 7
BX3 C7 C8 SINGLE NONE 8
BX3 C7 C10 SINGLE NONE 9
BX3 C8 C9 DOUBLE NONE 10
BX3 C8 C12 SINGLE NONE 11
BX3 C10 C11 DOUBLE NONE 12
BX3 C11 C13 SINGLE NONE 13
BX3 C12 C13 DOUBLE NONE 14
BX3 C13 C14 SINGLE NONE 15
BX3 C15 C14 SINGLE BEGINWEDGE 16
BX3 C15 C16 SINGLE NONE 17
BX3 C15 C22 SINGLE NONE 18
BX3 C16 C17 DOUBLE NONE 19
BX3 C16 C21 SINGLE NONE 20
BX3 C17 C18 SINGLE NONE 21
BX3 C18 C19 DOUBLE NONE 22
BX3 C19 C20 SINGLE NONE 23
BX3 C19 O25 SINGLE NONE 24
BX3 C20 C21 DOUBLE NONE 25
BX3 C22 O23 DOUBLE NONE 26
BX3 C22 O24 SINGLE NONE 27
BX3 O25 C26 SINGLE NONE 28
BX3 C26 C27 SINGLE NONE 29
BX3 C26 C30 SINGLE NONE 30
BX3 C27 C34 SINGLE NONE 31
BX3 N28 C29 SINGLE NONE 32
BX3 N28 C31 SINGLE ENDUPRIGHT 33
BX3 N28 C34 SINGLE NONE 34
BX3 C29 C30 SINGLE NONE 35
BX3 C31 N32 DOUBLE NONE 36
BX3 C31 C33 SINGLE ENDUPRIGHT 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
BX3 MurckoScaffold S1 scaffold c1ccc2cc(CCc3ccc(OC4CCNCC4)cc3)ccc2c1 InChI=1S/C23H25NO/c1-2-4-21-17-19(7-10-20(21)3-1)6-5-18-8-11-22(12-9-18)25-23-13-15-24-16-14-23/h1-4,7-12,17,23-24H,5-6,13-16H2 FBELCHKGAMRABU-UHFFFAOYSA-N
BX3 napthalene F1 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
BX3 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
BX3 Z2856434918 F3 fragment CCOc1ccc(CC(=O)O)cc1 InChI=1S/C10H12O3/c1-2-13-9-5-3-8(4-6-9)7-10(11)12/h3-6H,2,7H2,1H3,(H,11,12) ZVVWZNFSMIFGEP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
BX3 C4 S1 1
BX3 C5 S1 1
BX3 C6 S1 1
BX3 C7 S1 1
BX3 C8 S1 1
BX3 C9 S1 1
BX3 C10 S1 1
BX3 C11 S1 1
BX3 C12 S1 1
BX3 C13 S1 1
BX3 C14 S1 1
BX3 C15 S1 1
BX3 C16 S1 1
BX3 C17 S1 1
BX3 C18 S1 1
BX3 C19 S1 1
BX3 C20 S1 1
BX3 C21 S1 1
BX3 O25 S1 1
BX3 C26 S1 1
BX3 C27 S1 1
BX3 N28 S1 1
BX3 C29 S1 1
BX3 C30 S1 1
BX3 C34 S1 1
BX3 C4 F1 1
BX3 C5 F1 1
BX3 C6 F1 1
BX3 C7 F1 1
BX3 C8 F1 1
BX3 C9 F1 1
BX3 C12 F1 1
BX3 C13 F1 1
BX3 C11 F1 1
BX3 C10 F1 1
BX3 C4 F2 1
BX3 C5 F2 1
BX3 C6 F2 1
BX3 C7 F2 1
BX3 C8 F2 1
BX3 C9 F2 1
BX3 C7 F2 2
BX3 C8 F2 2
BX3 C12 F2 2
BX3 C13 F2 2
BX3 C11 F2 2
BX3 C10 F2 2
BX3 C16 F2 3
BX3 C17 F2 3
BX3 C18 F2 3
BX3 C19 F2 3
BX3 C20 F2 3
BX3 C21 F2 3
BX3 C27 F3 1
BX3 C26 F3 1
BX3 O25 F3 1
BX3 C19 F3 1
BX3 C18 F3 1
BX3 C17 F3 1
BX3 C16 F3 1
BX3 C15 F3 1
BX3 C22 F3 1
BX3 O23 F3 1
BX3 O24 F3 1
BX3 C21 F3 1
BX3 C20 F3 1
BX3 C30 F3 2
BX3 C26 F3 2
BX3 O25 F3 2
BX3 C19 F3 2
BX3 C18 F3 2
BX3 C17 F3 2
BX3 C16 F3 2
BX3 C15 F3 2
BX3 C22 F3 2
BX3 O23 F3 2
BX3 O24 F3 2
BX3 C21 F3 2
BX3 C20 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id BX3
_pdbe_chem_comp_rdkit_properties.exactmw 458.232
_pdbe_chem_comp_rdkit_properties.amw 458.562
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34
_pdbe_chem_comp_rdkit_properties.NumAtoms 64
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.296
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 241.186
_pdbe_chem_comp_rdkit_properties.tpsa 123.490
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.320
_pdbe_chem_comp_rdkit_properties.CrippenMR 130.497
_pdbe_chem_comp_rdkit_properties.chi0v 16.514
_pdbe_chem_comp_rdkit_properties.chi1v 8.908
_pdbe_chem_comp_rdkit_properties.chi2v 3.883
_pdbe_chem_comp_rdkit_properties.chi3v 3.883
_pdbe_chem_comp_rdkit_properties.chi4v 2.399
_pdbe_chem_comp_rdkit_properties.chi0n 46.514
_pdbe_chem_comp_rdkit_properties.chi1n 23.605
_pdbe_chem_comp_rdkit_properties.chi2n 3.883
_pdbe_chem_comp_rdkit_properties.chi3n 3.883
_pdbe_chem_comp_rdkit_properties.chi4n 2.399
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.870
_pdbe_chem_comp_rdkit_properties.kappa1 6.415
_pdbe_chem_comp_rdkit_properties.kappa2 9.951
_pdbe_chem_comp_rdkit_properties.kappa3 5.364
_pdbe_chem_comp_rdkit_properties.Phi 1.877
#
_pdbe_chem_comp_external_mappings.comp_id BX3
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id BX3
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
BX3 N1 9.922 2.716 -0.754 ETKDGv3 1
BX3 C2 8.820 2.389 -1.356 ETKDGv3 2
BX3 N3 8.364 3.172 -2.466 ETKDGv3 3
BX3 C4 8.051 1.206 -0.895 ETKDGv3 4
BX3 C5 8.665 0.198 -0.241 ETKDGv3 5
BX3 C6 7.901 -0.984 0.212 ETKDGv3 6
BX3 C7 6.583 -1.058 -0.020 ETKDGv3 7
BX3 C8 5.892 0.047 -0.722 ETKDGv3 8
BX3 C9 6.584 1.120 -1.134 ETKDGv3 9
BX3 C10 5.785 -2.217 0.419 ETKDGv3 10
BX3 C11 4.468 -2.257 0.184 ETKDGv3 11
BX3 C12 4.436 -0.064 -0.939 ETKDGv3 12
BX3 C13 3.762 -1.152 -0.521 ETKDGv3 13
BX3 C14 2.268 -1.237 -0.719 ETKDGv3 14
BX3 C15 1.504 -0.453 0.371 ETKDGv3 15
BX3 C16 0.028 -0.336 0.041 ETKDGv3 16
BX3 C17 -0.748 -1.426 -0.123 ETKDGv3 17
BX3 C18 -2.185 -1.286 -0.439 ETKDGv3 18
BX3 C19 -2.739 -0.063 -0.560 ETKDGv3 19
BX3 C20 -1.889 1.132 -0.382 ETKDGv3 20
BX3 C21 -0.587 1.008 -0.097 ETKDGv3 21
BX3 C22 1.692 -1.050 1.741 ETKDGv3 22
BX3 O23 1.489 -2.278 1.941 ETKDGv3 23
BX3 O24 2.071 -0.232 2.801 ETKDGv3 24
BX3 O25 -4.097 0.138 -0.859 ETKDGv3 25
BX3 C26 -5.105 -0.877 -0.932 ETKDGv3 26
BX3 C27 -6.351 -0.303 -1.618 ETKDGv3 27
BX3 N28 -7.237 0.339 0.597 ETKDGv3 28
BX3 C29 -6.117 -0.283 1.320 ETKDGv3 29
BX3 C30 -5.473 -1.386 0.473 ETKDGv3 30
BX3 C31 -8.418 0.781 1.302 ETKDGv3 31
BX3 N32 -9.537 0.906 0.659 ETKDGv3 32
BX3 C33 -8.387 1.032 2.785 ETKDGv3 33
BX3 C34 -6.993 0.805 -0.777 ETKDGv3 34
BX3 HN1 10.490 3.540 -1.054 ETKDGv3 35
BX3 HN31 8.870 4.041 -2.746 ETKDGv3 36
BX3 HN32 7.571 2.856 -3.066 ETKDGv3 37
BX3 H5 9.730 0.224 -0.050 ETKDGv3 38
BX3 H6 8.419 -1.783 0.728 ETKDGv3 39
BX3 H9 6.065 1.937 -1.619 ETKDGv3 40
BX3 H10 6.259 -3.042 0.937 ETKDGv3 41
BX3 H11 3.903 -3.118 0.519 ETKDGv3 42
BX3 H12 3.908 0.743 -1.436 ETKDGv3 43
BX3 H141 1.952 -2.302 -0.728 ETKDGv3 44
BX3 H142 2.010 -0.823 -1.719 ETKDGv3 45
BX3 H15 1.934 0.573 0.397 ETKDGv3 46
BX3 H17 -0.336 -2.422 -0.026 ETKDGv3 47
BX3 H18 -2.764 -2.187 -0.570 ETKDGv3 48
BX3 H20 -2.325 2.118 -0.480 ETKDGv3 49
BX3 H21 0.014 1.899 0.031 ETKDGv3 50
BX3 HO4 2.197 -0.612 3.732 ETKDGv3 51
BX3 H26 -4.744 -1.723 -1.556 ETKDGv3 52
BX3 H271 -6.074 0.104 -2.615 ETKDGv3 53
BX3 H272 -7.094 -1.116 -1.778 ETKDGv3 54
BX3 H291 -6.465 -0.746 2.267 ETKDGv3 55
BX3 H292 -5.361 0.494 1.568 ETKDGv3 56
BX3 H301 -6.187 -2.234 0.378 ETKDGv3 57
BX3 H302 -4.572 -1.768 0.996 ETKDGv3 58
BX3 HN3 -10.423 1.198 1.131 ETKDGv3 59
BX3 H331 -8.562 0.080 3.328 ETKDGv3 60
BX3 H332 -9.171 1.762 3.078 ETKDGv3 61
BX3 H333 -7.404 1.454 3.083 ETKDGv3 62
BX3 H341 -6.323 1.691 -0.748 ETKDGv3 63
BX3 H342 -7.938 1.115 -1.273 ETKDGv3 64
#