data_BXM
#
_chem_comp.id BXM
_chem_comp.name
4-tert-butyl-N-[2-methyl-3-(1-methyl-5-{[5-(morpholine-4-carbonyl)pyridin-2-yl]amino}-6-oxo-1,6-dihydropyridin-3-yl)phenyl]benzamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C34 H37 N5 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-09-01
_chem_comp.pdbx_modified_date 2018-09-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 579.689
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BXM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6AUB
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BXM C1 C1 C 0 1 Y N N N N N -43.645 19.341 9.111 1.029 3.416 -0.104 C1 BXM 1
BXM C11 C2 C 0 1 N N N N N N -43.044 18.021 9.464 -0.443 3.359 -0.279 C11 BXM 2
BXM C12 C3 C 0 1 N N N N N N -42.336 17.849 10.723 -1.258 2.823 0.743 C12 BXM 3
BXM C13 C4 C 0 1 N N N N N N -41.775 16.674 11.125 -2.611 2.780 0.561 C13 BXM 4
BXM C14 C5 C 0 1 N N N N N N -41.875 15.468 10.275 -3.163 3.272 -0.644 C14 BXM 5
BXM C17 C6 C 0 1 N N N N N N -43.132 16.872 8.713 -1.015 3.828 -1.425 C17 BXM 6
BXM C2 C7 C 0 1 Y N N N N N -43.614 19.889 7.802 1.792 2.257 -0.221 C2 BXM 7
BXM C21 C8 C 0 1 N N N N N N -44.878 21.207 5.124 5.093 1.042 0.512 C21 BXM 8
BXM C23 C9 C 0 1 Y N N N N N -44.643 21.655 3.773 5.948 -0.149 0.326 C23 BXM 9
BXM C24 C10 C 0 1 Y N N N N N -45.596 21.691 2.750 7.145 -0.270 1.034 C24 BXM 10
BXM C26 C11 C 0 1 Y N N N N N -45.261 22.121 1.469 7.938 -1.385 0.856 C26 BXM 11
BXM C28 C12 C 0 1 Y N N N N N -43.946 22.525 1.112 7.550 -2.381 -0.022 C28 BXM 12
BXM C29 C13 C 0 1 Y N N N N N -43.005 22.482 2.143 6.365 -2.266 -0.727 C29 BXM 13
BXM C3 C14 C 0 1 N N N N N N -42.925 19.129 6.665 1.125 0.941 -0.526 C3 BXM 14
BXM C31 C15 C 0 1 Y N N N N N -43.343 22.049 3.434 5.559 -1.160 -0.554 C31 BXM 15
BXM C33 C16 C 0 1 N N N N N N -43.558 23.035 -0.263 8.422 -3.595 -0.212 C33 BXM 16
BXM C34 C17 C 0 1 N N N N N N -44.685 22.757 -1.268 9.796 -3.161 -0.726 C34 BXM 17
BXM C38 C18 C 0 1 N N N N N N -43.354 24.551 -0.205 8.583 -4.321 1.125 C38 BXM 18
BXM C4 C19 C 0 1 Y N N N N N -44.198 21.153 7.504 3.167 2.318 -0.056 C4 BXM 19
BXM C42 C20 C 0 1 N N N N N N -42.236 22.422 -0.799 7.771 -4.536 -1.228 C42 BXM 20
BXM C46 C21 C 0 1 Y N N N N N -40.841 17.190 13.362 -4.279 1.188 1.269 C46 BXM 21
BXM C49 C22 C 0 1 Y N N N N N -40.778 19.246 14.439 -5.923 -0.270 1.971 C49 BXM 22
BXM C5 C23 C 0 1 Y N N N N N -44.819 21.895 8.498 3.780 3.533 0.225 C5 BXM 23
BXM C50 C24 C 0 1 Y N N N N N -40.228 18.774 15.632 -5.940 -0.898 0.724 C50 BXM 24
BXM C51 C25 C 0 1 Y N N N N N -40.004 17.386 15.608 -5.070 -0.444 -0.279 C51 BXM 25
BXM C52 C26 C 0 1 Y N N N N N -40.296 16.616 14.509 -4.242 0.608 0.002 C52 BXM 26
BXM C60 C27 C 0 1 N N N N N N -42.670 14.437 8.158 -2.948 4.287 -2.841 C60 BXM 27
BXM C7 C28 C 0 1 Y N N N N N -44.874 21.397 9.795 3.022 4.683 0.342 C7 BXM 28
BXM C71 C29 C 0 1 N N N N N N -39.873 19.593 16.832 -6.859 -2.023 0.465 C71 BXM 29
BXM C81 C30 C 0 1 N N N N N N -36.592 17.960 18.027 -4.525 -4.569 -0.360 C81 BXM 30
BXM C82 C31 C 0 1 N N N N N N -37.484 18.659 16.992 -5.052 -3.178 -0.730 C82 BXM 31
BXM C84 C32 C 0 1 N N N N N N -38.153 20.308 18.687 -7.380 -4.148 -0.647 C84 BXM 32
BXM C85 C33 C 0 1 N N N N N N -37.210 19.490 19.659 -6.740 -5.492 -0.281 C85 BXM 33
BXM C9 C34 C 0 1 Y N N N N N -44.306 20.146 10.083 1.653 4.632 0.173 C9 BXM 34
BXM N16 N1 N 0 1 N N N N N N -42.567 15.629 9.047 -2.360 3.776 -1.600 N16 BXM 35
BXM N19 N2 N 0 1 N N N N N N -44.113 21.611 6.204 3.938 1.156 -0.173 N19 BXM 36
BXM N47 N3 N 0 1 N N N N N N -41.091 16.385 12.283 -3.443 2.254 1.557 N47 BXM 37
BXM N48 N4 N 0 1 Y N N N N N -41.077 18.539 13.348 -5.107 0.737 2.201 N48 BXM 38
BXM N83 N5 N 0 1 N N N N N N -38.582 19.542 17.482 -6.447 -3.073 -0.273 N83 BXM 39
BXM O15 O1 O 0 1 N N N N N N -41.383 14.374 10.577 -4.370 3.239 -0.818 O15 BXM 40
BXM O22 O2 O 0 1 N N N N N N -45.790 20.394 5.314 5.431 1.919 1.283 O22 BXM 41
BXM O72 O3 O 0 1 N N N N N N -40.727 20.350 17.279 -7.987 -2.004 0.919 O72 BXM 42
BXM O86 O4 O 0 1 N N N N N N -36.135 18.868 18.985 -5.430 -5.561 -0.851 O86 BXM 43
BXM H1 H1 H 0 1 N N N N N N -42.250 18.703 11.378 -0.817 2.452 1.656 H1 BXM 44
BXM H2 H2 H 0 1 N N N N N N -43.683 16.930 7.786 -0.390 4.237 -2.205 H2 BXM 45
BXM H3 H3 H 0 1 N N N N N N -46.609 21.380 2.957 7.449 0.507 1.720 H3 BXM 46
BXM H4 H4 H 0 1 N N N N N N -46.033 22.149 0.714 8.864 -1.480 1.404 H4 BXM 47
BXM H5 H5 H 0 1 N N N N N N -41.990 22.790 1.941 6.068 -3.047 -1.412 H5 BXM 48
BXM H6 H6 H 0 1 N N N N N N -41.865 19.420 6.618 1.077 0.800 -1.606 H6 BXM 49
BXM H7 H7 H 0 1 N N N N N N -43.000 18.047 6.849 1.699 0.130 -0.079 H7 BXM 50
BXM H8 H8 H 0 1 N N N N N N -43.415 19.374 5.711 0.115 0.941 -0.115 H8 BXM 51
BXM H9 H9 H 0 1 N N N N N N -42.574 22.019 4.192 4.635 -1.072 -1.105 H9 BXM 52
BXM H10 H10 H 0 1 N N N N N N -45.625 23.189 -0.894 10.427 -4.040 -0.863 H10 BXM 53
BXM H11 H11 H 0 1 N N N N N N -44.432 23.212 -2.237 9.681 -2.644 -1.678 H11 BXM 54
BXM H12 H12 H 0 1 N N N N N N -44.805 21.671 -1.393 10.259 -2.491 -0.002 H12 BXM 55
BXM H13 H13 H 0 1 N N N N N N -42.550 24.786 0.508 7.604 -4.630 1.492 H13 BXM 56
BXM H14 H14 H 0 1 N N N N N N -43.078 24.922 -1.203 9.214 -5.199 0.988 H14 BXM 57
BXM H15 H15 H 0 1 N N N N N N -44.287 25.034 0.121 9.047 -3.651 1.849 H15 BXM 58
BXM H16 H16 H 0 1 N N N N N N -41.424 22.618 -0.083 6.792 -4.845 -0.862 H16 BXM 59
BXM H17 H17 H 0 1 N N N N N N -42.360 21.336 -0.925 7.656 -4.019 -2.180 H17 BXM 60
BXM H18 H18 H 0 1 N N N N N N -41.988 22.878 -1.769 8.402 -5.415 -1.365 H18 BXM 61
BXM H19 H19 H 0 1 N N N N N N -40.985 20.305 14.394 -6.589 -0.610 2.751 H19 BXM 62
BXM H20 H20 H 0 1 N N N N N N -45.257 22.854 8.266 4.852 3.580 0.353 H20 BXM 63
BXM H21 H21 H 0 1 N N N N N N -39.588 16.909 16.483 -5.060 -0.910 -1.254 H21 BXM 64
BXM H22 H22 H 0 1 N N N N N N -40.101 15.554 14.534 -3.566 0.987 -0.752 H22 BXM 65
BXM H23 H23 H 0 1 N N N N N N -42.155 13.585 8.626 -3.002 3.483 -3.575 H23 BXM 66
BXM H24 H24 H 0 1 N N N N N N -43.730 14.185 8.003 -3.951 4.664 -2.639 H24 BXM 67
BXM H25 H25 H 0 1 N N N N N N -42.201 14.661 7.188 -2.328 5.094 -3.231 H25 BXM 68
BXM H26 H26 H 0 1 N N N N N N -45.351 21.970 10.577 3.503 5.625 0.560 H26 BXM 69
BXM H27 H27 H 0 1 N N N N N N -37.172 17.170 18.527 -3.543 -4.717 -0.809 H27 BXM 70
BXM H28 H28 H 0 1 N N N N N N -35.728 17.512 17.514 -4.446 -4.652 0.724 H28 BXM 71
BXM H29 H29 H 0 1 N N N N N N -37.948 17.873 16.379 -4.448 -2.414 -0.241 H29 BXM 72
BXM H30 H30 H 0 1 N N N N N N -36.828 19.276 16.361 -5.009 -3.044 -1.811 H30 BXM 73
BXM H31 H31 H 0 1 N N N N N N -37.612 21.206 18.353 -7.571 -4.113 -1.719 H31 BXM 74
BXM H32 H32 H 0 1 N N N N N N -39.052 20.608 19.246 -8.317 -4.028 -0.103 H32 BXM 75
BXM H33 H33 H 0 1 N N N N N N -36.801 20.178 20.413 -6.669 -5.579 0.803 H33 BXM 76
BXM H34 H34 H 0 1 N N N N N N -37.808 18.713 20.158 -7.351 -6.305 -0.672 H34 BXM 77
BXM H35 H35 H 0 1 N N N N N N -44.374 19.774 11.095 1.064 5.533 0.261 H35 BXM 78
BXM H36 H36 H 0 1 N N N N N N -43.423 22.312 6.023 3.641 0.433 -0.747 H36 BXM 79
BXM H37 H37 H 0 1 N N N N N N -40.725 15.457 12.346 -3.433 2.636 2.448 H37 BXM 80
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BXM C34 C33 SING N N 1
BXM C42 C33 SING N N 2
BXM C33 C38 SING N N 3
BXM C33 C28 SING N N 4
BXM C28 C26 DOUB Y N 5
BXM C28 C29 SING Y N 6
BXM C26 C24 SING Y N 7
BXM C29 C31 DOUB Y N 8
BXM C24 C23 DOUB Y N 9
BXM C31 C23 SING Y N 10
BXM C23 C21 SING N N 11
BXM C21 O22 DOUB N N 12
BXM C21 N19 SING N N 13
BXM N19 C4 SING N N 14
BXM C3 C2 SING N N 15
BXM C4 C2 DOUB Y N 16
BXM C4 C5 SING Y N 17
BXM C2 C1 SING Y N 18
BXM C60 N16 SING N N 19
BXM C5 C7 DOUB Y N 20
BXM C17 N16 SING N N 21
BXM C17 C11 DOUB N N 22
BXM N16 C14 SING N N 23
BXM C1 C11 SING N N 24
BXM C1 C9 DOUB Y N 25
BXM C11 C12 SING N N 26
BXM C7 C9 SING Y N 27
BXM C14 O15 DOUB N N 28
BXM C14 C13 SING N N 29
BXM C12 C13 DOUB N N 30
BXM C13 N47 SING N N 31
BXM N47 C46 SING N N 32
BXM N48 C46 DOUB Y N 33
BXM N48 C49 SING Y N 34
BXM C46 C52 SING Y N 35
BXM C49 C50 DOUB Y N 36
BXM C52 C51 DOUB Y N 37
BXM C51 C50 SING Y N 38
BXM C50 C71 SING N N 39
BXM C71 O72 DOUB N N 40
BXM C71 N83 SING N N 41
BXM C82 N83 SING N N 42
BXM C82 C81 SING N N 43
BXM N83 C84 SING N N 44
BXM C81 O86 SING N N 45
BXM C84 C85 SING N N 46
BXM O86 C85 SING N N 47
BXM C12 H1 SING N N 48
BXM C17 H2 SING N N 49
BXM C24 H3 SING N N 50
BXM C26 H4 SING N N 51
BXM C29 H5 SING N N 52
BXM C3 H6 SING N N 53
BXM C3 H7 SING N N 54
BXM C3 H8 SING N N 55
BXM C31 H9 SING N N 56
BXM C34 H10 SING N N 57
BXM C34 H11 SING N N 58
BXM C34 H12 SING N N 59
BXM C38 H13 SING N N 60
BXM C38 H14 SING N N 61
BXM C38 H15 SING N N 62
BXM C42 H16 SING N N 63
BXM C42 H17 SING N N 64
BXM C42 H18 SING N N 65
BXM C49 H19 SING N N 66
BXM C5 H20 SING N N 67
BXM C51 H21 SING N N 68
BXM C52 H22 SING N N 69
BXM C60 H23 SING N N 70
BXM C60 H24 SING N N 71
BXM C60 H25 SING N N 72
BXM C7 H26 SING N N 73
BXM C81 H27 SING N N 74
BXM C81 H28 SING N N 75
BXM C82 H29 SING N N 76
BXM C82 H30 SING N N 77
BXM C84 H31 SING N N 78
BXM C84 H32 SING N N 79
BXM C85 H33 SING N N 80
BXM C85 H34 SING N N 81
BXM C9 H35 SING N N 82
BXM N19 H36 SING N N 83
BXM N47 H37 SING N N 84
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BXM SMILES ACDLabs 12.01 c4(C=3C=C(Nc1ccc(cn1)C(=O)N2CCOCC2)C(=O)N(C=3)C)cccc(c4C)NC(=O)c5ccc(cc5)C(C)(C)C
BXM InChI InChI 1.03 InChI=1S/C34H37N5O4/c1-22-27(7-6-8-28(22)37-31(40)23-9-12-26(13-10-23)34(2,3)4)25-19-29(33(42)38(5)21-25)36-30-14-11-24(20-35-30)32(41)39-15-17-43-18-16-39/h6-14,19-21H,15-18H2,1-5H3,(H,35,36)(H,37,40)
BXM InChIKey InChI 1.03 WHRCWROQSJHEBV-UHFFFAOYSA-N
BXM SMILES_CANONICAL CACTVS 3.385 CN1C=C(C=C(Nc2ccc(cn2)C(=O)N3CCOCC3)C1=O)c4cccc(NC(=O)c5ccc(cc5)C(C)(C)C)c4C
BXM SMILES CACTVS 3.385 CN1C=C(C=C(Nc2ccc(cn2)C(=O)N3CCOCC3)C1=O)c4cccc(NC(=O)c5ccc(cc5)C(C)(C)C)c4C
BXM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 Cc1c(cccc1NC(=O)c2ccc(cc2)C(C)(C)C)C3=CN(C(=O)C(=C3)Nc4ccc(cn4)C(=O)N5CCOCC5)C
BXM SMILES "OpenEye OEToolkits" 2.0.6 Cc1c(cccc1NC(=O)c2ccc(cc2)C(C)(C)C)C3=CN(C(=O)C(=C3)Nc4ccc(cn4)C(=O)N5CCOCC5)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BXM "SYSTEMATIC NAME" ACDLabs 12.01 4-tert-butyl-N-[2-methyl-3-(1-methyl-5-{[5-(morpholine-4-carbonyl)pyridin-2-yl]amino}-6-oxo-1,6-dihydropyridin-3-yl)phenyl]benzamide
BXM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 4-~{tert}-butyl-~{N}-[2-methyl-3-[1-methyl-5-[(5-morpholin-4-ylcarbonylpyridin-2-yl)amino]-6-oxidanylidene-pyridin-3-yl]phenyl]benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BXM 'Create component' 2017-09-01 RCSB
BXM 'Initial release' 2018-09-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
BXM C1 C 12.093 -2.250 1
BXM C11 C 10.794 -3.000 2
BXM C12 C 9.495 -2.250 3
BXM C13 C 8.196 -3.000 4
BXM C14 C 8.196 -4.500 5
BXM C17 C 10.794 -4.500 6
BXM C2 C 13.392 -3.000 7
BXM C21 C 17.290 -2.250 8
BXM C23 C 18.588 -3.000 9
BXM C24 C 19.887 -2.250 10
BXM C26 C 21.187 -3.000 11
BXM C28 C 21.187 -4.500 12
BXM C29 C 19.887 -5.250 13
BXM C3 C 13.392 -4.500 14
BXM C31 C 18.588 -4.500 15
BXM C33 C 22.486 -5.250 16
BXM C34 C 23.785 -6.000 17
BXM C38 C 21.736 -6.549 18
BXM C4 C 14.691 -2.250 19
BXM C42 C 23.236 -3.951 20
BXM C46 C 6.897 -0.750 21
BXM C49 C 8.196 1.500 22
BXM C5 C 14.691 -0.750 23
BXM C50 C 6.897 2.250 24
BXM C51 C 5.598 1.500 25
BXM C52 C 5.598 0.000 26
BXM C60 C 9.495 -6.750 27
BXM C7 C 13.392 0.000 28
BXM C71 C 6.897 3.750 29
BXM C81 C 3.000 4.500 30
BXM C82 C 4.299 3.750 31
BXM C84 C 5.598 6.000 32
BXM C85 C 4.299 6.750 33
BXM C9 C 12.093 -0.750 34
BXM N16 N 9.495 -5.250 35
BXM N19 N 15.990 -3.000 36
BXM N47 N 6.897 -2.250 37
BXM N48 N 8.196 0.000 38
BXM N83 N 5.598 4.500 39
BXM O15 O 6.897 -5.250 40
BXM O22 O 17.290 -0.750 41
BXM O72 O 8.196 4.500 42
BXM O86 O 3.000 6.000 43
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
BXM C34 C33 SINGLE NONE 1
BXM C42 C33 SINGLE NONE 2
BXM C33 C38 SINGLE NONE 3
BXM C33 C28 SINGLE NONE 4
BXM C28 C26 SINGLE NONE 5
BXM C28 C29 DOUBLE NONE 6
BXM C26 C24 DOUBLE NONE 7
BXM C29 C31 SINGLE NONE 8
BXM C24 C23 SINGLE NONE 9
BXM C31 C23 DOUBLE NONE 10
BXM C23 C21 SINGLE NONE 11
BXM C21 O22 DOUBLE NONE 12
BXM C21 N19 SINGLE NONE 13
BXM N19 C4 SINGLE NONE 14
BXM C3 C2 SINGLE NONE 15
BXM C4 C2 DOUBLE NONE 16
BXM C4 C5 SINGLE NONE 17
BXM C2 C1 SINGLE NONE 18
BXM C60 N16 SINGLE NONE 19
BXM C5 C7 DOUBLE NONE 20
BXM C17 N16 SINGLE NONE 21
BXM C17 C11 DOUBLE NONE 22
BXM N16 C14 SINGLE NONE 23
BXM C1 C11 SINGLE NONE 24
BXM C1 C9 DOUBLE NONE 25
BXM C11 C12 SINGLE NONE 26
BXM C7 C9 SINGLE NONE 27
BXM C14 O15 DOUBLE NONE 28
BXM C14 C13 SINGLE NONE 29
BXM C12 C13 DOUBLE NONE 30
BXM C13 N47 SINGLE NONE 31
BXM N47 C46 SINGLE NONE 32
BXM N48 C46 SINGLE NONE 33
BXM N48 C49 DOUBLE NONE 34
BXM C46 C52 DOUBLE NONE 35
BXM C49 C50 SINGLE NONE 36
BXM C52 C51 SINGLE NONE 37
BXM C51 C50 DOUBLE NONE 38
BXM C50 C71 SINGLE NONE 39
BXM C71 O72 DOUBLE NONE 40
BXM C71 N83 SINGLE NONE 41
BXM C82 N83 SINGLE NONE 42
BXM C82 C81 SINGLE NONE 43
BXM N83 C84 SINGLE NONE 44
BXM C81 O86 SINGLE NONE 45
BXM C84 C85 SINGLE NONE 46
BXM O86 C85 SINGLE NONE 47
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
BXM MurckoScaffold S1 scaffold 'O=C(Nc1cccc(-c2c[nH]c(=O)c(Nc3ccc(C(=O)N4CCOCC4)cn3)c2)c1)c1ccccc1' InChI=1S/C28H25N5O4/c34-26(19-5-2-1-3-6-19)31-23-8-4-7-20(15-23)22-16-24(27(35)30-18-22)32-25-10-9-21(17-29-25)28(36)33-11-13-37-14-12-33/h1-10,15-18H,11-14H2,(H,29,32)(H,30,35)(H,31,34) ORUFLPKUUHCJCO-UHFFFAOYSA-N
BXM amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
BXM phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
BXM pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
BXM C1 S1 1
BXM C11 S1 1
BXM C12 S1 1
BXM C13 S1 1
BXM C14 S1 1
BXM C17 S1 1
BXM C2 S1 1
BXM C21 S1 1
BXM C23 S1 1
BXM C24 S1 1
BXM C26 S1 1
BXM C28 S1 1
BXM C29 S1 1
BXM C31 S1 1
BXM C4 S1 1
BXM C46 S1 1
BXM C49 S1 1
BXM C5 S1 1
BXM C50 S1 1
BXM C51 S1 1
BXM C52 S1 1
BXM C7 S1 1
BXM C71 S1 1
BXM C81 S1 1
BXM C82 S1 1
BXM C84 S1 1
BXM C85 S1 1
BXM C9 S1 1
BXM N16 S1 1
BXM N19 S1 1
BXM N47 S1 1
BXM N48 S1 1
BXM N83 S1 1
BXM O15 S1 1
BXM O22 S1 1
BXM O72 S1 1
BXM O86 S1 1
BXM N19 F1 1
BXM C21 F1 1
BXM O22 F1 1
BXM C23 F1 1
BXM N83 F1 2
BXM C71 F1 2
BXM O72 F1 2
BXM C50 F1 2
BXM C1 F2 1
BXM C2 F2 1
BXM C4 F2 1
BXM C5 F2 1
BXM C7 F2 1
BXM C9 F2 1
BXM C23 F2 2
BXM C24 F2 2
BXM C26 F2 2
BXM C28 F2 2
BXM C29 F2 2
BXM C31 F2 2
BXM C14 F3 1
BXM C13 F3 1
BXM C12 F3 1
BXM C11 F3 1
BXM C17 F3 1
BXM N16 F3 1
BXM C46 F3 2
BXM C52 F3 2
BXM C51 F3 2
BXM C50 F3 2
BXM C49 F3 2
BXM N48 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id BXM
_pdbe_chem_comp_rdkit_properties.exactmw 579.285
_pdbe_chem_comp_rdkit_properties.amw 579.701
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 43
_pdbe_chem_comp_rdkit_properties.NumAtoms 80
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.294
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 303.183
_pdbe_chem_comp_rdkit_properties.tpsa 105.560
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.681
_pdbe_chem_comp_rdkit_properties.CrippenMR 164.443
_pdbe_chem_comp_rdkit_properties.chi0v 20.869
_pdbe_chem_comp_rdkit_properties.chi1v 11.204
_pdbe_chem_comp_rdkit_properties.chi2v 5.030
_pdbe_chem_comp_rdkit_properties.chi3v 5.030
_pdbe_chem_comp_rdkit_properties.chi4v 3.042
_pdbe_chem_comp_rdkit_properties.chi0n 57.869
_pdbe_chem_comp_rdkit_properties.chi1n 29.598
_pdbe_chem_comp_rdkit_properties.chi2n 5.030
_pdbe_chem_comp_rdkit_properties.chi3n 5.030
_pdbe_chem_comp_rdkit_properties.chi4n 3.042
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.760
_pdbe_chem_comp_rdkit_properties.kappa1 8.446
_pdbe_chem_comp_rdkit_properties.kappa2 12.229
_pdbe_chem_comp_rdkit_properties.kappa3 6.674
_pdbe_chem_comp_rdkit_properties.Phi 2.402
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
BXM UniChem ChEMBL CHEMBL1973138
BXM UniChem PDBe BXM
BXM UniChem ZINC ZINC000063539615
BXM UniChem SureChEMBL SCHEMBL102343
BXM UniChem 'PubChem TPHARMA' 99346615
BXM UniChem PubChem 46894109
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
BXM C1 0.756 -1.503 -0.999 ETKDGv3 1
BXM C11 -0.385 -0.566 -0.873 ETKDGv3 2
BXM C12 -1.600 -0.989 -0.135 ETKDGv3 3
BXM C13 -2.659 -0.180 -0.001 ETKDGv3 4
BXM C14 -2.585 1.188 -0.559 ETKDGv3 5
BXM C17 -0.333 0.647 -1.448 ETKDGv3 6
BXM C2 2.140 -1.122 -0.557 ETKDGv3 7
BXM C21 5.198 -0.488 -1.015 ETKDGv3 8
BXM C23 6.491 -0.025 -0.459 ETKDGv3 9
BXM C24 7.358 0.872 -1.260 ETKDGv3 10
BXM C26 8.523 1.314 -0.771 ETKDGv3 11
BXM C28 8.981 0.920 0.597 ETKDGv3 12
BXM C29 8.175 0.109 1.317 ETKDGv3 13
BXM C3 2.361 0.163 0.208 ETKDGv3 14
BXM C31 6.889 -0.375 0.775 ETKDGv3 15
BXM C33 10.317 1.409 1.193 ETKDGv3 16
BXM C34 11.101 2.323 0.222 ETKDGv3 17
BXM C38 11.214 0.196 1.524 ETKDGv3 18
BXM C4 3.171 -1.966 -0.818 ETKDGv3 19
BXM C42 10.047 2.216 2.482 ETKDGv3 20
BXM C46 -5.170 -0.381 0.359 ETKDGv3 21
BXM C49 -7.452 -0.252 1.086 ETKDGv3 22
BXM C5 2.903 -3.294 -1.412 ETKDGv3 23
BXM C50 -7.879 -0.002 -0.312 ETKDGv3 24
BXM C51 -6.936 0.046 -1.268 ETKDGv3 25
BXM C52 -5.518 -0.170 -0.923 ETKDGv3 26
BXM C60 -1.322 2.910 -1.901 ETKDGv3 27
BXM C7 1.661 -3.652 -1.743 ETKDGv3 28
BXM C71 -9.307 0.220 -0.636 ETKDGv3 29
BXM C81 -11.160 -1.888 1.873 ETKDGv3 30
BXM C82 -10.423 -1.694 0.545 ETKDGv3 31
BXM C84 -11.561 0.533 0.413 ETKDGv3 32
BXM C85 -12.217 0.170 1.749 ETKDGv3 33
BXM C9 0.544 -2.715 -1.540 ETKDGv3 34
BXM N16 -1.437 1.564 -1.339 ETKDGv3 35
BXM N19 4.527 -1.639 -0.476 ETKDGv3 36
BXM N47 -3.807 -0.629 0.740 ETKDGv3 37
BXM N48 -6.194 -0.428 1.368 ETKDGv3 38
BXM N83 -10.346 -0.264 0.231 ETKDGv3 39
BXM O15 -3.500 2.024 -0.324 ETKDGv3 40
BXM O22 4.691 0.125 -1.994 ETKDGv3 41
BXM O72 -9.620 0.864 -1.676 ETKDGv3 42
BXM O86 -12.413 -1.228 1.852 ETKDGv3 43
BXM H1 -1.630 -1.981 0.301 ETKDGv3 44
BXM H2 0.548 0.939 -2.008 ETKDGv3 45
BXM H3 7.056 1.172 -2.255 ETKDGv3 46
BXM H4 9.114 1.962 -1.400 ETKDGv3 47
BXM H5 8.446 -0.208 2.315 ETKDGv3 48
BXM H6 2.578 0.990 -0.499 ETKDGv3 49
BXM H7 3.198 0.067 0.930 ETKDGv3 50
BXM H8 1.463 0.425 0.805 ETKDGv3 51
BXM H9 6.271 -0.997 1.409 ETKDGv3 52
BXM H10 11.351 1.782 -0.716 ETKDGv3 53
BXM H11 12.058 2.655 0.680 ETKDGv3 54
BXM H12 10.516 3.235 -0.024 ETKDGv3 55
BXM H13 11.383 -0.419 0.614 ETKDGv3 56
BXM H14 12.202 0.530 1.909 ETKDGv3 57
BXM H15 10.757 -0.450 2.302 ETKDGv3 58
BXM H16 9.579 1.586 3.267 ETKDGv3 59
BXM H17 9.368 3.070 2.269 ETKDGv3 60
BXM H18 10.995 2.619 2.901 ETKDGv3 61
BXM H19 -8.180 -0.280 1.886 ETKDGv3 62
BXM H20 3.721 -3.984 -1.579 ETKDGv3 63
BXM H21 -7.198 0.226 -2.303 ETKDGv3 64
BXM H22 -4.780 -0.173 -1.715 ETKDGv3 65
BXM H23 -0.578 2.931 -2.726 ETKDGv3 66
BXM H24 -1.004 3.617 -1.107 ETKDGv3 67
BXM H25 -2.298 3.238 -2.317 ETKDGv3 68
BXM H26 1.474 -4.625 -2.179 ETKDGv3 69
BXM H27 -10.533 -1.532 2.722 ETKDGv3 70
BXM H28 -11.334 -2.973 2.028 ETKDGv3 71
BXM H29 -9.411 -2.146 0.618 ETKDGv3 72
BXM H30 -10.977 -2.215 -0.265 ETKDGv3 73
BXM H31 -11.315 1.618 0.413 ETKDGv3 74
BXM H32 -12.267 0.324 -0.420 ETKDGv3 75
BXM H33 -11.607 0.553 2.599 ETKDGv3 76
BXM H34 -13.207 0.670 1.807 ETKDGv3 77
BXM H35 -0.446 -3.010 -1.866 ETKDGv3 78
BXM H36 5.103 -2.383 -0.022 ETKDGv3 79
BXM H37 -3.645 -1.199 1.601 ETKDGv3 80
#