data_C8N
#
_chem_comp.id C8N
_chem_comp.name
"[(3~{S})-3-carboxy-7-(naphthalen-1-ylmethyl)-5-oxidanylidene-2,3-dihydro-[1,3]thiazolo[3,2-a]pyridin-8-yl]-dimethyl-azanium"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H21 N2 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2017-11-20
_chem_comp.pdbx_modified_date 2018-04-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 381.468
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code C8N
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6EV0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C8N O01 O1 O 0 1 N N N N N N 43.150 -6.660 46.095 -4.775 2.907 -0.470 O01 C8N 1
C8N C02 C1 C 0 1 N N N N N N 42.735 -7.784 46.428 -3.693 2.115 -0.533 C02 C8N 2
C8N O03 O2 O 0 1 N N N N N N 42.025 -8.536 45.734 -2.984 2.138 -1.510 O03 C8N 3
C8N C04 C2 C 0 1 N N S N N N 43.108 -8.321 47.805 -3.363 1.198 0.617 C04 C8N 4
C8N C05 C3 C 0 1 N N N N N N 44.548 -7.969 48.159 -4.512 0.210 0.804 C05 C8N 5
C8N S06 S1 S 0 1 N N N N N N 44.576 -7.670 49.951 -3.737 -1.419 0.592 S06 C8N 6
C8N C07 C4 C 0 1 N N N N N N 42.853 -7.341 50.015 -2.099 -0.816 0.296 C07 C8N 7
C8N C08 C5 C 0 1 N N N N N N 42.107 -6.755 51.026 -0.943 -1.537 0.043 C08 C8N 8
C8N N09 N1 N 1 1 N N N N N N 42.746 -6.323 52.231 -0.992 -2.934 0.000 N09 C8N 9
C8N C10 C6 C 0 1 N N N N N N 43.010 -7.374 53.210 -0.709 -3.392 -1.367 C10 C8N 10
C8N C11 C7 C 0 1 N N N N N N 43.913 -5.455 52.050 0.012 -3.487 0.919 C11 C8N 11
C8N C12 C8 C 0 1 N N N N N N 40.686 -6.588 50.848 0.263 -0.881 -0.168 C12 C8N 12
C8N C13 C9 C 0 1 N N N N N N 39.937 -5.940 51.995 1.526 -1.656 -0.442 C13 C8N 13
C8N C14 C10 C 0 1 Y N N N N N 39.208 -6.960 52.863 2.633 -0.700 -0.805 C14 C8N 14
C8N C15 C11 C 0 1 Y N N N N N 38.193 -7.706 52.336 2.989 -0.527 -2.107 C15 C8N 15
C8N C16 C12 C 0 1 Y N N N N N 37.466 -8.673 53.073 4.010 0.352 -2.461 C16 C8N 16
C8N C17 C13 C 0 1 Y N N N N N 37.777 -8.895 54.398 4.682 1.064 -1.515 C17 C8N 17
C8N C18 C14 C 0 1 Y N N N N N 38.818 -8.155 55.002 4.344 0.911 -0.160 C18 C8N 18
C8N C19 C15 C 0 1 Y N N N N N 39.162 -8.360 56.361 5.015 1.628 0.845 C19 C8N 19
C8N C20 C16 C 0 1 Y N N N N N 40.181 -7.627 56.934 4.660 1.455 2.148 C20 C8N 20
C8N C21 C17 C 0 1 Y N N N N N 40.891 -6.669 56.178 3.639 0.576 2.502 C21 C8N 21
C8N C22 C18 C 0 1 Y N N N N N 40.571 -6.455 54.855 2.967 -0.135 1.556 C22 C8N 22
C8N C23 C19 C 0 1 Y N N N N N 39.527 -7.191 54.231 3.301 0.022 0.200 C23 C8N 23
C8N C24 C20 C 0 1 N N N N N N 40.059 -6.992 49.709 0.277 0.498 -0.119 C24 C8N 24
C8N C25 C21 C 0 1 N N N N N N 40.832 -7.608 48.640 -0.903 1.190 0.137 C25 C8N 25
C8N O26 O3 O 0 1 N N N N N N 40.304 -7.988 47.595 -0.879 2.410 0.178 O26 C8N 26
C8N N27 N2 N 0 1 N N N N N N 42.231 -7.758 48.846 -2.087 0.539 0.344 N27 C8N 27
C8N H1 H1 H 0 1 N N N N N N 42.842 -6.455 45.220 -4.946 3.478 -1.232 H1 C8N 28
C8N H041 H2 H 0 0 N N N N N N 43.005 -9.416 47.795 -3.261 1.795 1.524 H041 C8N 29
C8N H052 H3 H 0 0 N N N N N N 45.218 -8.803 47.902 -4.936 0.304 1.804 H052 C8N 30
C8N H051 H4 H 0 0 N N N N N N 44.863 -7.065 47.617 -5.279 0.369 0.047 H051 C8N 31
C8N H101 H5 H 0 0 N N N N N N 43.500 -6.938 54.093 0.369 -3.465 -1.510 H101 C8N 32
C8N H103 H6 H 0 0 N N N N N N 42.061 -7.842 53.511 -1.163 -4.370 -1.524 H103 C8N 33
C8N H102 H7 H 0 0 N N N N N N 43.668 -8.134 52.763 -1.123 -2.680 -2.081 H102 C8N 34
C8N H112 H8 H 0 0 N N N N N N 44.325 -5.184 53.033 0.101 -2.840 1.792 H112 C8N 35
C8N H113 H9 H 0 0 N N N N N N 44.679 -5.987 51.466 -0.295 -4.484 1.235 H113 C8N 36
C8N H111 H10 H 0 0 N N N N N N 43.612 -4.543 51.514 0.975 -3.547 0.412 H111 C8N 37
C8N H132 H11 H 0 0 N N N N N N 40.656 -5.392 52.622 1.808 -2.218 0.448 H132 C8N 38
C8N H131 H12 H 0 0 N N N N N N 39.199 -5.236 51.582 1.357 -2.346 -1.269 H131 C8N 39
C8N H151 H13 H 0 0 N N N N N N 37.930 -7.550 51.300 2.472 -1.080 -2.877 H151 C8N 40
C8N H161 H14 H 0 0 N N N N N N 36.673 -9.233 52.600 4.273 0.471 -3.502 H161 C8N 41
C8N H171 H15 H 0 0 N N N N N N 37.229 -9.629 54.970 5.472 1.741 -1.805 H171 C8N 42
C8N H191 H16 H 0 0 N N N N N N 38.626 -9.091 56.949 5.809 2.313 0.585 H191 C8N 43
C8N H201 H17 H 0 0 N N N N N N 40.438 -7.788 57.971 5.178 2.007 2.918 H201 C8N 44
C8N H211 H18 H 0 0 N N N N N N 41.687 -6.102 56.638 3.378 0.456 3.543 H211 C8N 45
C8N H221 H19 H 0 0 N N N N N N 41.120 -5.720 54.285 2.178 -0.814 1.845 H221 C8N 46
C8N H241 H20 H 0 0 N N N N N N 38.993 -6.856 49.599 1.199 1.038 -0.278 H241 C8N 47
C8N H091 H21 H 0 0 N N N N N N 42.070 -5.736 52.677 -1.910 -3.247 0.277 H091 C8N 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C8N O03 C02 DOUB N N 1
C8N O01 C02 SING N N 2
C8N C02 C04 SING N N 3
C8N O26 C25 DOUB N N 4
C8N C04 C05 SING N N 5
C8N C04 N27 SING N N 6
C8N C05 S06 SING N N 7
C8N C25 N27 SING N N 8
C8N C25 C24 SING N N 9
C8N N27 C07 SING N N 10
C8N C24 C12 DOUB N N 11
C8N S06 C07 SING N N 12
C8N C07 C08 DOUB N N 13
C8N C12 C08 SING N N 14
C8N C12 C13 SING N N 15
C8N C08 N09 SING N N 16
C8N C13 C14 SING N N 17
C8N C11 N09 SING N N 18
C8N N09 C10 SING N N 19
C8N C15 C14 DOUB Y N 20
C8N C15 C16 SING Y N 21
C8N C14 C23 SING Y N 22
C8N C16 C17 DOUB Y N 23
C8N C23 C22 DOUB Y N 24
C8N C23 C18 SING Y N 25
C8N C17 C18 SING Y N 26
C8N C22 C21 SING Y N 27
C8N C18 C19 DOUB Y N 28
C8N C21 C20 DOUB Y N 29
C8N C19 C20 SING Y N 30
C8N O01 H1 SING N N 31
C8N C04 H041 SING N N 32
C8N C05 H052 SING N N 33
C8N C05 H051 SING N N 34
C8N C10 H101 SING N N 35
C8N C10 H103 SING N N 36
C8N C10 H102 SING N N 37
C8N C11 H112 SING N N 38
C8N C11 H113 SING N N 39
C8N C11 H111 SING N N 40
C8N C13 H132 SING N N 41
C8N C13 H131 SING N N 42
C8N C15 H151 SING N N 43
C8N C16 H161 SING N N 44
C8N C17 H171 SING N N 45
C8N C19 H191 SING N N 46
C8N C20 H201 SING N N 47
C8N C21 H211 SING N N 48
C8N C22 H221 SING N N 49
C8N C24 H241 SING N N 50
C8N N09 H091 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C8N InChI InChI 1.03 InChI=1S/C21H20N2O3S/c1-22(2)19-15(10-14-8-5-7-13-6-3-4-9-16(13)14)11-18(24)23-17(21(25)26)12-27-20(19)23/h3-9,11,17H,10,12H2,1-2H3,(H,25,26)/p+1/t17-/m1/s1
C8N InChIKey InChI 1.03 BCEJXMPUFHXHBT-QGZVFWFLSA-O
C8N SMILES_CANONICAL CACTVS 3.385 C[NH+](C)C1=C2SC[C@@H](N2C(=O)C=C1Cc3cccc4ccccc34)C(O)=O
C8N SMILES CACTVS 3.385 C[NH+](C)C1=C2SC[CH](N2C(=O)C=C1Cc3cccc4ccccc34)C(O)=O
C8N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C[NH+](C)C1=C2N([C@H](CS2)C(=O)O)C(=O)C=C1Cc3cccc4c3cccc4
C8N SMILES "OpenEye OEToolkits" 2.0.6 C[NH+](C)C1=C2N(C(CS2)C(=O)O)C(=O)C=C1Cc3cccc4c3cccc4
#
_pdbx_chem_comp_identifier.comp_id C8N
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
"[(3~{S})-3-carboxy-7-(naphthalen-1-ylmethyl)-5-oxidanylidene-2,3-dihydro-[1,3]thiazolo[3,2-a]pyridin-8-yl]-dimethyl-azanium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C8N 'Create component' 2017-11-20 EBI
C8N 'Modify charge' 2017-11-29 EBI
C8N 'Initial release' 2018-05-02 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
C8N O01 O 4.446 -1.485 1
C8N C02 C 4.912 -2.911 2
C8N O03 O 3.910 -4.028 3
C8N C04 C 6.380 -3.220 4
C8N C05 C 6.987 -4.582 5
C8N S06 S 8.470 -4.428 6
C8N C07 C 8.784 -2.970 7
C8N C08 C 10.083 -2.220 8
C8N N09 N 11.382 -2.970 9
C8N C10 C 10.632 -4.269 10
C8N C11 C 12.681 -3.720 11
C8N C12 C 10.083 -0.720 12
C8N C13 C 11.382 0.030 13
C8N C14 C 11.382 1.530 14
C8N C15 C 10.083 2.280 15
C8N C16 C 10.083 3.780 16
C8N C17 C 11.382 4.530 17
C8N C18 C 12.681 3.780 18
C8N C19 C 14.022 4.582 19
C8N C20 C 15.381 3.811 20
C8N C21 C 15.381 2.249 21
C8N C22 C 14.022 1.478 22
C8N C23 C 12.681 2.280 23
C8N C24 C 8.784 0.030 24
C8N C25 C 7.485 -0.720 25
C8N O26 O 6.186 0.030 26
C8N N27 N 7.485 -2.220 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
C8N O03 C02 DOUBLE NONE 1
C8N O01 C02 SINGLE NONE 2
C8N C04 C02 SINGLE BEGINDASH 3
C8N O26 C25 DOUBLE NONE 4
C8N C04 C05 SINGLE NONE 5
C8N C04 N27 SINGLE NONE 6
C8N C05 S06 SINGLE NONE 7
C8N C25 N27 SINGLE NONE 8
C8N C25 C24 SINGLE NONE 9
C8N N27 C07 SINGLE NONE 10
C8N C24 C12 DOUBLE NONE 11
C8N S06 C07 SINGLE NONE 12
C8N C07 C08 DOUBLE NONE 13
C8N C12 C08 SINGLE NONE 14
C8N C12 C13 SINGLE NONE 15
C8N C08 N09 SINGLE NONE 16
C8N C13 C14 SINGLE NONE 17
C8N C11 N09 SINGLE NONE 18
C8N N09 C10 SINGLE NONE 19
C8N C15 C14 DOUBLE NONE 20
C8N C15 C16 SINGLE NONE 21
C8N C14 C23 SINGLE NONE 22
C8N C16 C17 DOUBLE NONE 23
C8N C23 C22 DOUBLE NONE 24
C8N C23 C18 SINGLE NONE 25
C8N C17 C18 SINGLE NONE 26
C8N C22 C21 SINGLE NONE 27
C8N C18 C19 DOUBLE NONE 28
C8N C21 C20 DOUBLE NONE 29
C8N C19 C20 SINGLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
C8N MurckoScaffold S1 scaffold O=c1cc(Cc2cccc3ccccc23)cc2n1CCS2 InChI=1S/C18H15NOS/c20-17-11-13(12-18-19(17)8-9-21-18)10-15-6-3-5-14-4-1-2-7-16(14)15/h1-7,11-12H,8-10H2 IGUVKGFHYIBVJV-UHFFFAOYSA-N
C8N napthalene F1 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
C8N peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
C8N phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
C8N pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
C8N C04 S1 1
C8N C05 S1 1
C8N S06 S1 1
C8N C07 S1 1
C8N C08 S1 1
C8N C12 S1 1
C8N C13 S1 1
C8N C14 S1 1
C8N C15 S1 1
C8N C16 S1 1
C8N C17 S1 1
C8N C18 S1 1
C8N C19 S1 1
C8N C20 S1 1
C8N C21 S1 1
C8N C22 S1 1
C8N C23 S1 1
C8N C24 S1 1
C8N C25 S1 1
C8N O26 S1 1
C8N N27 S1 1
C8N C15 F1 1
C8N C16 F1 1
C8N C17 F1 1
C8N C18 F1 1
C8N C23 F1 1
C8N C14 F1 1
C8N C22 F1 1
C8N C21 F1 1
C8N C20 F1 1
C8N C19 F1 1
C8N O03 F2 1
C8N C02 F2 1
C8N C04 F2 1
C8N N27 F2 1
C8N C14 F3 1
C8N C15 F3 1
C8N C16 F3 1
C8N C17 F3 1
C8N C18 F3 1
C8N C23 F3 1
C8N C18 F3 2
C8N C23 F3 2
C8N C22 F3 2
C8N C21 F3 2
C8N C20 F3 2
C8N C19 F3 2
C8N C07 F4 1
C8N C08 F4 1
C8N C12 F4 1
C8N C24 F4 1
C8N C25 F4 1
C8N N27 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id C8N
_pdbe_chem_comp_rdkit_properties.exactmw 381.127
_pdbe_chem_comp_rdkit_properties.amw 381.477
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.238
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 190.433
_pdbe_chem_comp_rdkit_properties.tpsa 63.740
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.973
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.440
_pdbe_chem_comp_rdkit_properties.chi0v 13.844
_pdbe_chem_comp_rdkit_properties.chi1v 7.929
_pdbe_chem_comp_rdkit_properties.chi2v 4.390
_pdbe_chem_comp_rdkit_properties.chi3v 4.390
_pdbe_chem_comp_rdkit_properties.chi4v 3.352
_pdbe_chem_comp_rdkit_properties.chi0n 34.027
_pdbe_chem_comp_rdkit_properties.chi1n 17.468
_pdbe_chem_comp_rdkit_properties.chi2n 3.525
_pdbe_chem_comp_rdkit_properties.chi3n 3.525
_pdbe_chem_comp_rdkit_properties.chi4n 2.429
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.570
_pdbe_chem_comp_rdkit_properties.kappa1 5.718
_pdbe_chem_comp_rdkit_properties.kappa2 6.868
_pdbe_chem_comp_rdkit_properties.kappa3 3.047
_pdbe_chem_comp_rdkit_properties.Phi 1.454
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
C8N UniChem PDBe C8N
C8N UniChem PubChem 137349064
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
C8N O01 -4.347 2.394 -1.422 ETKDGv3 1
C8N C02 -4.186 2.673 -0.067 ETKDGv3 2
C8N O03 -4.593 3.769 0.401 ETKDGv3 3
C8N C04 -3.559 1.652 0.843 ETKDGv3 4
C8N C05 -4.544 0.502 1.108 ETKDGv3 5
C8N S06 -3.600 -1.038 1.348 ETKDGv3 6
C8N C07 -2.272 -0.346 0.371 ETKDGv3 7
C8N C08 -1.268 -1.047 -0.233 ETKDGv3 8
C8N N09 -1.286 -2.508 -0.335 ETKDGv3 9
C8N C10 -2.548 -3.051 -0.881 ETKDGv3 10
C8N C11 -0.916 -3.147 0.939 ETKDGv3 11
C8N C12 -0.090 -0.267 -0.793 ETKDGv3 12
C8N C13 1.170 -0.990 -1.262 ETKDGv3 13
C8N C14 2.443 -0.168 -1.150 ETKDGv3 14
C8N C15 3.051 0.259 -2.275 ETKDGv3 15
C8N C16 4.284 1.075 -2.244 ETKDGv3 16
C8N C17 4.857 1.437 -1.093 ETKDGv3 17
C8N C18 4.264 1.028 0.192 ETKDGv3 18
C8N C19 4.822 1.390 1.358 ETKDGv3 19
C8N C20 4.207 0.973 2.632 ETKDGv3 20
C8N C21 3.092 0.234 2.628 ETKDGv3 21
C8N C22 2.472 -0.169 1.350 ETKDGv3 22
C8N C23 3.024 0.203 0.177 ETKDGv3 23
C8N C24 -0.156 1.078 -0.895 ETKDGv3 24
C8N C25 -1.290 1.812 -0.340 ETKDGv3 25
C8N O26 -1.308 3.072 -0.371 ETKDGv3 26
C8N N27 -2.357 1.069 0.254 ETKDGv3 27
C8N H1 -4.776 3.069 -2.043 ETKDGv3 28
C8N H041 -3.283 2.127 1.811 ETKDGv3 29
C8N H052 -5.223 0.344 0.241 ETKDGv3 30
C8N H051 -5.159 0.713 2.008 ETKDGv3 31
C8N H101 -3.295 -3.263 -0.089 ETKDGv3 32
C8N H103 -2.358 -4.021 -1.394 ETKDGv3 33
C8N H102 -2.990 -2.359 -1.632 ETKDGv3 34
C8N H112 -0.814 -4.246 0.801 ETKDGv3 35
C8N H113 0.062 -2.761 1.298 ETKDGv3 36
C8N H111 -1.675 -2.967 1.727 ETKDGv3 37
C8N H132 1.004 -1.333 -2.306 ETKDGv3 38
C8N H131 1.346 -1.900 -0.653 ETKDGv3 39
C8N H151 2.638 0.012 -3.245 ETKDGv3 40
C8N H161 4.729 1.385 -3.180 ETKDGv3 41
C8N H171 5.759 2.036 -1.113 ETKDGv3 42
C8N H191 5.724 1.991 1.378 ETKDGv3 43
C8N H201 4.660 1.268 3.570 ETKDGv3 44
C8N H211 2.641 -0.070 3.564 ETKDGv3 45
C8N H221 1.570 -0.762 1.390 ETKDGv3 46
C8N H241 0.646 1.653 -1.341 ETKDGv3 47
C8N H091 -0.571 -2.806 -1.034 ETKDGv3 48
#