data_CEQ
#
_chem_comp.id CEQ
_chem_comp.name ETHYL-TRIMETHYL-SILANE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C5 H14 Si"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2000-09-29
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 102.250
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CEQ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1FV2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CEQ SI1 SI1 SI 0 0 N N N N N N 12.205 -7.364 -9.091 0.000 0.003 -0.392 SI1 CEQ 1
CEQ C2 C2 C 0 1 N N N N N N 11.744 -6.890 -10.761 -0.012 1.157 -1.855 C2 CEQ 2
CEQ C3 C3 C 0 1 N N N N N N 10.721 -7.868 -8.227 1.532 -1.054 -0.449 C3 CEQ 3
CEQ C4 C4 C 0 1 N N N N N N 13.309 -8.767 -9.174 -1.509 -1.087 -0.449 C4 CEQ 4
CEQ C5 C5 C 0 1 N N N N N N 12.980 -6.015 -8.211 -0.010 0.997 1.182 C5 CEQ 5
CEQ C6 C6 C 0 1 N N N N N N 14.519 -6.093 -8.215 -0.000 0.049 2.383 C6 CEQ 6
CEQ H21 1H2 H 0 1 N N N N N N 12.668 -6.576 -11.299 -0.006 0.575 -2.777 H21 CEQ 7
CEQ H22 2H2 H 0 1 N N N N N N 11.184 -7.691 -11.297 -0.909 1.775 -1.822 H22 CEQ 8
CEQ H23 3H2 H 0 1 N N N N N N 10.947 -6.110 -10.783 0.870 1.795 -1.822 H23 CEQ 9
CEQ H31 1H3 H 0 1 N N N N N N 11.007 -8.162 -7.190 2.415 -0.416 -0.416 H31 CEQ 10
CEQ H32 2H3 H 0 1 N N N N N N 9.924 -7.088 -8.249 1.540 -1.729 0.406 H32 CEQ 11
CEQ H33 3H3 H 0 1 N N N N N N 10.161 -8.669 -8.763 1.539 -1.636 -1.371 H33 CEQ 12
CEQ H41 1H4 H 0 1 N N N N N N 13.595 -9.061 -8.137 -2.406 -0.468 -0.416 H41 CEQ 13
CEQ H42 2H4 H 0 1 N N N N N N 12.876 -9.615 -9.753 -1.503 -1.669 -1.371 H42 CEQ 14
CEQ H43 3H4 H 0 1 N N N N N N 14.195 -8.573 -9.821 -1.502 -1.762 0.406 H43 CEQ 15
CEQ H51 1H5 H 0 1 N N N N N N 12.631 -5.031 -8.605 -0.907 1.615 1.216 H51 CEQ 16
CEQ H52 2H5 H 0 1 N N N N N N 12.588 -5.944 -7.169 0.872 1.635 1.216 H52 CEQ 17
CEQ H61 1H6 H 0 1 N N N N N N 15.002 -5.251 -7.666 -0.006 0.630 3.305 H61 CEQ 18
CEQ H62 2H6 H 0 1 N N N N N N 14.867 -7.076 -7.821 -0.883 -0.588 2.350 H62 CEQ 19
CEQ H63 3H6 H 0 1 N N N N N N 14.910 -6.163 -9.256 0.896 -0.569 2.350 H63 CEQ 20
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CEQ SI1 C2 SING N N 1
CEQ SI1 C3 SING N N 2
CEQ SI1 C4 SING N N 3
CEQ SI1 C5 SING N N 4
CEQ C2 H21 SING N N 5
CEQ C2 H22 SING N N 6
CEQ C2 H23 SING N N 7
CEQ C3 H31 SING N N 8
CEQ C3 H32 SING N N 9
CEQ C3 H33 SING N N 10
CEQ C4 H41 SING N N 11
CEQ C4 H42 SING N N 12
CEQ C4 H43 SING N N 13
CEQ C5 C6 SING N N 14
CEQ C5 H51 SING N N 15
CEQ C5 H52 SING N N 16
CEQ C6 H61 SING N N 17
CEQ C6 H62 SING N N 18
CEQ C6 H63 SING N N 19
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CEQ SMILES ACDLabs 10.04 CC[Si](C)(C)C
CEQ SMILES_CANONICAL CACTVS 3.341 CC[Si](C)(C)C
CEQ SMILES CACTVS 3.341 CC[Si](C)(C)C
CEQ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC[Si](C)(C)C
CEQ SMILES "OpenEye OEToolkits" 1.5.0 CC[Si](C)(C)C
CEQ InChI InChI 1.03 InChI=1S/C5H14Si/c1-5-6(2,3)4/h5H2,1-4H3
CEQ InChIKey InChI 1.03 UKAJDOBPPOAZSS-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CEQ "SYSTEMATIC NAME" ACDLabs 10.04 ethyl(trimethyl)silane
CEQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 ethyl-trimethyl-silane
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CEQ 'Create component' 2000-09-29 RCSB
CEQ 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id CEQ
_pdbe_chem_comp_drugbank_details.drugbank_id DB02265
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Ethyl-Trimethyl-Silane
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 3439-38-1
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id CEQ
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02265
_pdbe_chem_comp_drugbank_classification.parent 'Hydrocarbon derivatives'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class ?
_pdbe_chem_comp_drugbank_classification.superclass 'Hydrocarbon derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as hydrocarbon derivatives. These are derivatives of hydrocarbons obtained by substituting one or more carbon atoms by an heteroatom. They contain at least one carbon atom and heteroatom.'
#
_pdbe_chem_comp_drugbank_targets.comp_id CEQ
_pdbe_chem_comp_drugbank_targets.drugbank_id DB02265
_pdbe_chem_comp_drugbank_targets.name 'Tetanus toxin'
_pdbe_chem_comp_drugbank_targets.organism 'Clostridium tetani (strain Massachusetts / E88)'
_pdbe_chem_comp_drugbank_targets.uniprot_id P04958
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CEQ SI1 Si 4.299 0.000 1
CEQ C2 C 3.000 -0.750 2
CEQ C3 C 3.549 1.299 3
CEQ C4 C 5.049 -1.299 4
CEQ C5 C 5.598 0.750 5
CEQ C6 C 6.897 0.000 6
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CEQ SI1 C2 SINGLE NONE 1
CEQ SI1 C3 SINGLE NONE 2
CEQ SI1 C4 SINGLE NONE 3
CEQ SI1 C5 SINGLE NONE 4
CEQ C5 C6 SINGLE NONE 5
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id CEQ
_pdbe_chem_comp_rdkit_properties.exactmw 102.086
_pdbe_chem_comp_rdkit_properties.amw 102.253
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 0
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 0
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 6
_pdbe_chem_comp_rdkit_properties.NumAtoms 20
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 61.250
_pdbe_chem_comp_rdkit_properties.tpsa 0
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.345
_pdbe_chem_comp_rdkit_properties.CrippenMR 33.827
_pdbe_chem_comp_rdkit_properties.chi0v 4
_pdbe_chem_comp_rdkit_properties.chi1v 3.250
_pdbe_chem_comp_rdkit_properties.chi2v 0.562
_pdbe_chem_comp_rdkit_properties.chi3v 0.562
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 17
_pdbe_chem_comp_rdkit_properties.chi1n 8.250
_pdbe_chem_comp_rdkit_properties.chi2n 0.188
_pdbe_chem_comp_rdkit_properties.chi3n 0.188
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.217
_pdbe_chem_comp_rdkit_properties.kappa1 0.458
_pdbe_chem_comp_rdkit_properties.kappa2 1.781
_pdbe_chem_comp_rdkit_properties.kappa3 4.217
_pdbe_chem_comp_rdkit_properties.Phi 0.136
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CEQ UniChem DrugBank DB02265
CEQ UniChem PDBe CEQ
CEQ UniChem ChEBI 48788
CEQ UniChem ZINC ZINC000169748472
CEQ UniChem fdasrs O72DFI3IWO
CEQ UniChem ACTor 3439-38-1
CEQ UniChem Nikkaji J95.393H
CEQ UniChem ChemicalBook CB6204149
CEQ UniChem 'Probes And Drugs' PD008091
CEQ UniChem 'EPA CompTox Dashboard' DTXSID00187961
CEQ UniChem SureChEMBL SCHEMBL152107
CEQ UniChem 'PubChem TPHARMA' 15946273
CEQ UniChem PubChem 137936
CEQ UniChem Nikkaji J3.192.068J
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CEQ SI1 -0.445 0.105 0.134 ETKDGv3 1
CEQ C2 -1.138 -0.650 -1.429 ETKDGv3 2
CEQ C3 -0.393 -1.189 1.480 ETKDGv3 3
CEQ C4 -1.558 1.502 0.678 ETKDGv3 4
CEQ C5 1.274 0.790 -0.180 ETKDGv3 5
CEQ C6 2.242 -0.297 -0.629 ETKDGv3 6
CEQ H21 -1.127 0.107 -2.240 ETKDGv3 7
CEQ H22 -0.521 -1.522 -1.726 ETKDGv3 8
CEQ H23 -2.180 -0.982 -1.246 ETKDGv3 9
CEQ H31 0.214 -2.054 1.142 ETKDGv3 10
CEQ H32 0.060 -0.753 2.394 ETKDGv3 11
CEQ H33 -1.424 -1.529 1.704 ETKDGv3 12
CEQ H41 -2.579 1.109 0.866 ETKDGv3 13
CEQ H42 -1.600 2.273 -0.119 ETKDGv3 14
CEQ H43 -1.157 1.952 1.609 ETKDGv3 15
CEQ H51 1.648 1.254 0.757 ETKDGv3 16
CEQ H52 1.208 1.574 -0.964 ETKDGv3 17
CEQ H61 2.338 -1.080 0.152 ETKDGv3 18
CEQ H62 3.243 0.150 -0.803 ETKDGv3 19
CEQ H63 1.895 -0.759 -1.577 ETKDGv3 20
#