data_CKS
#
_chem_comp.id CKS
_chem_comp.name
N-(3-fluoro-2-{2-[(2S,5R)-5-methyl-1-(phenylsulfonyl)piperazin-2-yl]ethyl}phenyl)-3,3-bis(4-fluorophenyl)propanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C34 H34 F3 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-09-27
_chem_comp.pdbx_modified_date 2017-12-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 621.712
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CKS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6B3C
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CKS C2 C1 C 0 1 N N S N N N -15.596 20.692 -5.463 3.778 0.297 -1.216 C2 CKS 1
CKS C7 C2 C 0 1 Y N N N N N -20.249 19.478 -6.315 1.926 -1.786 1.464 C7 CKS 2
CKS C9 C3 C 0 1 Y N N N N N -20.246 17.927 -8.142 0.894 -3.933 1.227 C9 CKS 3
CKS C10 C4 C 0 1 Y N N N N N -19.021 18.412 -8.564 2.091 -4.460 0.780 C10 CKS 4
CKS C11 C5 C 0 1 Y N N N N N -18.399 19.432 -7.863 3.204 -3.648 0.669 C11 CKS 5
CKS C12 C6 C 0 1 N N N N N N -14.866 22.985 -4.661 2.020 1.958 -0.591 C12 CKS 6
CKS C13 C7 C 0 1 Y N N N N N -14.014 23.761 -3.679 1.393 2.708 0.556 C13 CKS 7
CKS C15 C8 C 0 1 Y N N N N N -12.147 25.202 -3.153 -0.394 2.978 2.141 C15 CKS 8
CKS C18 C9 C 0 1 Y N N N N N -14.320 23.751 -2.321 2.021 3.824 1.080 C18 CKS 9
CKS N19 N1 N 0 1 N N N N N N -12.501 24.589 -5.439 -0.460 1.160 0.552 N19 CKS 10
CKS C20 C10 C 0 1 N N N N N N -11.321 24.032 -5.863 -1.784 0.989 0.738 C20 CKS 11
CKS C22 C11 C 0 1 N N N N N N -11.039 24.303 -7.318 -2.448 -0.289 0.295 C22 CKS 12
CKS C8 C12 C 0 1 Y N N N N N -20.862 18.458 -7.023 0.811 -2.596 1.569 C8 CKS 13
CKS C16 C13 C 0 1 Y N N N N N -12.461 25.165 -1.803 0.241 4.088 2.664 C16 CKS 14
CKS C26 C14 C 0 1 Y N N N N N -13.319 23.368 -9.116 -5.382 1.810 0.420 C26 CKS 15
CKS C30 C15 C 0 1 Y N N N N N -12.714 21.206 -8.271 -4.387 0.912 -1.564 C30 CKS 16
CKS C31 C16 C 0 1 Y N N N N N -10.396 24.081 -10.324 -5.312 -2.223 1.252 C31 CKS 17
CKS C35 C17 C 0 1 Y N N N N N -9.338 22.027 -9.672 -4.442 -2.090 -0.975 C35 CKS 18
CKS C17 C18 C 0 1 Y N N N N N -13.556 24.437 -1.394 1.445 4.513 2.134 C17 CKS 19
CKS C27 C19 C 0 1 Y N N N N N -14.554 22.895 -9.498 -5.971 2.812 -0.327 C27 CKS 20
CKS C29 C20 C 0 1 Y N N N N N -13.953 20.730 -8.642 -4.970 1.916 -2.313 C29 CKS 21
CKS C32 C21 C 0 1 Y N N N N N -9.666 24.097 -11.499 -5.905 -3.434 0.949 C32 CKS 22
CKS C34 C22 C 0 1 Y N N N N N -8.608 22.032 -10.847 -5.038 -3.298 -1.282 C34 CKS 23
CKS C25 C23 C 0 1 Y N N N N N -12.393 22.531 -8.505 -4.588 0.862 -0.198 C25 CKS 24
CKS C24 C24 C 0 1 Y N N N N N -10.224 23.055 -9.405 -4.583 -1.550 0.289 C24 CKS 25
CKS C14 C25 C 0 1 Y N N N N N -12.908 24.505 -4.080 0.181 2.284 1.084 C14 CKS 26
CKS C28 C26 C 0 1 Y N N N N N -14.858 21.572 -9.250 -5.766 2.866 -1.695 C28 CKS 27
CKS C33 C27 C 0 1 Y N N N N N -8.781 23.067 -11.745 -5.768 -3.974 -0.319 C33 CKS 28
CKS C6 C28 C 0 1 Y N N N N N -19.018 19.950 -6.740 3.122 -2.311 1.011 C6 CKS 29
CKS C38 C29 C 0 1 N N N N N N -17.408 19.555 -3.969 5.577 -1.422 -1.642 C38 CKS 30
CKS C1 C30 C 0 1 N N N N N N -15.044 19.308 -5.746 4.664 1.327 -1.925 C1 CKS 31
CKS C C31 C 0 1 N N R N N N -16.719 18.227 -4.157 6.392 -0.325 -2.335 C CKS 32
CKS C39 C32 C 0 1 N N N N N N -17.490 17.390 -5.146 7.271 -0.949 -3.420 C39 CKS 33
CKS C4 C33 C 0 1 N N N N N N -14.595 21.473 -4.607 3.049 0.964 -0.048 C4 CKS 34
CKS C23 C34 C 0 1 N N N N N N -11.026 23.000 -8.124 -3.942 -0.227 0.619 C23 CKS 35
CKS N3 N2 N 0 1 N N N N N N -16.941 20.702 -4.794 4.635 -0.786 -0.709 N3 CKS 36
CKS N N3 N 0 1 N N N N N N -15.303 18.421 -4.581 5.477 0.650 -2.944 N CKS 37
CKS O21 O1 O 0 1 N N N N N N -10.550 23.408 -5.148 -2.441 1.864 1.262 O21 CKS 38
CKS O O2 O 0 1 N N N N N N -17.662 22.170 -6.802 4.266 -0.111 1.635 O CKS 39
CKS O5 O3 O 0 1 N N N N N N -19.286 21.732 -4.926 5.669 -2.109 1.099 O5 CKS 40
CKS F37 F1 F 0 1 N N N N N N -16.063 21.090 -9.606 -6.342 3.845 -2.427 F37 CKS 41
CKS F36 F2 F 0 1 N N N N N N -8.075 23.089 -12.890 -6.347 -5.158 -0.616 F36 CKS 42
CKS F F3 F 0 1 N N N N N N -15.368 23.053 -1.865 3.198 4.241 0.564 F CKS 43
CKS S S1 S 0 1 N N N N N N -18.232 21.268 -5.816 4.541 -1.276 0.870 S CKS 44
CKS H1 H1 H 0 1 N N N N N N -15.692 21.218 -6.424 3.051 -0.110 -1.918 H1 CKS 45
CKS H2 H2 H 0 1 N N N N N N -20.725 19.900 -5.442 1.861 -0.741 1.731 H2 CKS 46
CKS H3 H3 H 0 1 N N N N N N -20.724 17.129 -8.690 0.023 -4.567 1.309 H3 CKS 47
CKS H4 H4 H 0 1 N N N N N N -18.549 17.995 -9.441 2.156 -5.504 0.513 H4 CKS 48
CKS H5 H5 H 0 1 N N N N N N -17.444 19.817 -8.189 4.140 -4.059 0.320 H5 CKS 49
CKS H6 H6 H 0 1 N N N N N N -14.651 23.346 -5.677 1.247 1.419 -1.138 H6 CKS 50
CKS H7 H7 H 0 1 N N N N N N -15.926 23.162 -4.426 2.514 2.663 -1.260 H7 CKS 51
CKS H8 H8 H 0 1 N N N N N N -11.299 25.781 -3.487 -1.334 2.648 2.556 H8 CKS 52
CKS H9 H9 H 0 1 N N N N N N -13.085 25.063 -6.098 0.048 0.504 0.050 H9 CKS 53
CKS H10 H10 H 0 1 N N N N N N -10.058 24.793 -7.410 -2.314 -0.414 -0.780 H10 CKS 54
CKS H11 H11 H 0 1 N N N N N N -11.819 24.967 -7.719 -1.997 -1.133 0.818 H11 CKS 55
CKS H12 H12 H 0 1 N N N N N N -21.820 18.077 -6.702 -0.125 -2.185 1.917 H12 CKS 56
CKS H13 H13 H 0 1 N N N N N N -11.857 25.698 -1.084 -0.205 4.625 3.489 H13 CKS 57
CKS H14 H14 H 0 1 N N N N N N -13.066 24.403 -9.293 -5.538 1.770 1.488 H14 CKS 58
CKS H15 H15 H 0 1 N N N N N N -11.998 20.548 -7.800 -3.766 0.171 -2.046 H15 CKS 59
CKS H16 H16 H 0 1 N N N N N N -11.104 24.871 -10.121 -5.423 -1.800 2.240 H16 CKS 60
CKS H17 H17 H 0 1 N N N N N N -9.216 21.221 -8.964 -3.872 -1.563 -1.727 H17 CKS 61
CKS H18 H18 H 0 1 N N N N N N -13.819 24.402 -0.347 1.937 5.384 2.542 H18 CKS 62
CKS H19 H19 H 0 1 N N N N N N -15.269 23.545 -9.981 -6.592 3.553 0.156 H19 CKS 63
CKS H20 H20 H 0 1 N N N N N N -14.214 19.699 -8.456 -4.806 1.961 -3.379 H20 CKS 64
CKS H21 H21 H 0 1 N N N N N N -9.786 24.901 -12.211 -6.475 -3.960 1.701 H21 CKS 65
CKS H22 H22 H 0 1 N N N N N N -7.910 21.235 -11.060 -4.928 -3.720 -2.270 H22 CKS 66
CKS H23 H23 H 0 1 N N N N N N -17.288 19.840 -2.913 5.025 -1.994 -2.388 H23 CKS 67
CKS H24 H24 H 0 1 N N N N N N -18.475 19.405 -4.190 6.247 -2.086 -1.095 H24 CKS 68
CKS H25 H25 H 0 1 N N N N N N -15.535 18.893 -6.639 4.037 2.080 -2.402 H25 CKS 69
CKS H26 H26 H 0 1 N N N N N N -13.960 19.375 -5.922 5.319 1.806 -1.197 H26 CKS 70
CKS H27 H27 H 0 1 N N N N N N -16.721 17.702 -3.191 7.023 0.178 -1.601 H27 CKS 71
CKS H28 H28 H 0 1 N N N N N N -18.526 17.271 -4.797 6.640 -1.451 -4.154 H28 CKS 72
CKS H29 H29 H 0 1 N N N N N N -17.488 17.887 -6.127 7.851 -0.168 -3.913 H29 CKS 73
CKS H30 H30 H 0 1 N N N N N N -17.018 16.401 -5.236 7.948 -1.674 -2.968 H30 CKS 74
CKS H31 H31 H 0 1 N N N N N N -14.675 21.133 -3.564 2.541 0.204 0.545 H31 CKS 75
CKS H32 H32 H 0 1 N N N N N N -13.578 21.279 -4.979 3.769 1.492 0.577 H32 CKS 76
CKS H33 H33 H 0 1 N N N N N N -10.574 22.227 -7.485 -4.075 -0.013 1.680 H33 CKS 77
CKS H34 H34 H 0 1 N N N N N N -14.932 17.519 -4.804 4.893 0.211 -3.640 H34 CKS 78
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CKS F36 C33 SING N N 1
CKS C33 C32 DOUB Y N 2
CKS C33 C34 SING Y N 3
CKS C32 C31 SING Y N 4
CKS C34 C35 DOUB Y N 5
CKS C31 C24 DOUB Y N 6
CKS C35 C24 SING Y N 7
CKS F37 C28 SING N N 8
CKS C27 C28 DOUB Y N 9
CKS C27 C26 SING Y N 10
CKS C24 C23 SING N N 11
CKS C28 C29 SING Y N 12
CKS C26 C25 DOUB Y N 13
CKS C29 C30 DOUB Y N 14
CKS C10 C9 DOUB Y N 15
CKS C10 C11 SING Y N 16
CKS C25 C30 SING Y N 17
CKS C25 C23 SING N N 18
CKS C9 C8 SING Y N 19
CKS C23 C22 SING N N 20
CKS C11 C6 DOUB Y N 21
CKS C22 C20 SING N N 22
CKS C8 C7 DOUB Y N 23
CKS O S DOUB N N 24
CKS C6 C7 SING Y N 25
CKS C6 S SING N N 26
CKS C20 N19 SING N N 27
CKS C20 O21 DOUB N N 28
CKS S O5 DOUB N N 29
CKS S N3 SING N N 30
CKS C1 C2 SING N N 31
CKS C1 N SING N N 32
CKS C2 N3 SING N N 33
CKS C2 C4 SING N N 34
CKS N19 C14 SING N N 35
CKS C39 C SING N N 36
CKS N3 C38 SING N N 37
CKS C12 C4 SING N N 38
CKS C12 C13 SING N N 39
CKS N C SING N N 40
CKS C C38 SING N N 41
CKS C14 C13 DOUB Y N 42
CKS C14 C15 SING Y N 43
CKS C13 C18 SING Y N 44
CKS C15 C16 DOUB Y N 45
CKS C18 F SING N N 46
CKS C18 C17 DOUB Y N 47
CKS C16 C17 SING Y N 48
CKS C2 H1 SING N N 49
CKS C7 H2 SING N N 50
CKS C9 H3 SING N N 51
CKS C10 H4 SING N N 52
CKS C11 H5 SING N N 53
CKS C12 H6 SING N N 54
CKS C12 H7 SING N N 55
CKS C15 H8 SING N N 56
CKS N19 H9 SING N N 57
CKS C22 H10 SING N N 58
CKS C22 H11 SING N N 59
CKS C8 H12 SING N N 60
CKS C16 H13 SING N N 61
CKS C26 H14 SING N N 62
CKS C30 H15 SING N N 63
CKS C31 H16 SING N N 64
CKS C35 H17 SING N N 65
CKS C17 H18 SING N N 66
CKS C27 H19 SING N N 67
CKS C29 H20 SING N N 68
CKS C32 H21 SING N N 69
CKS C34 H22 SING N N 70
CKS C38 H23 SING N N 71
CKS C38 H24 SING N N 72
CKS C1 H25 SING N N 73
CKS C1 H26 SING N N 74
CKS C H27 SING N N 75
CKS C39 H28 SING N N 76
CKS C39 H29 SING N N 77
CKS C39 H30 SING N N 78
CKS C4 H31 SING N N 79
CKS C4 H32 SING N N 80
CKS C23 H33 SING N N 81
CKS N H34 SING N N 82
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CKS SMILES ACDLabs 12.01 C1(N(CC(C)NC1)S(c2ccccc2)(=O)=O)CCc3c(F)cccc3NC(=O)CC(c4ccc(cc4)F)c5ccc(cc5)F
CKS InChI InChI 1.03 InChI=1S/C34H34F3N3O3S/c1-23-22-40(44(42,43)29-6-3-2-4-7-29)28(21-38-23)18-19-30-32(37)8-5-9-33(30)39-34(41)20-31(24-10-14-26(35)15-11-24)25-12-16-27(36)17-13-25/h2-17,23,28,31,38H,18-22H2,1H3,(H,39,41)/t23-,28+/m1/s1
CKS InChIKey InChI 1.03 WYXLVNGAPMCPRL-LXFBAYGMSA-N
CKS SMILES_CANONICAL CACTVS 3.385 C[C@@H]1CN([C@@H](CCc2c(F)cccc2NC(=O)CC(c3ccc(F)cc3)c4ccc(F)cc4)CN1)[S](=O)(=O)c5ccccc5
CKS SMILES CACTVS 3.385 C[CH]1CN([CH](CCc2c(F)cccc2NC(=O)CC(c3ccc(F)cc3)c4ccc(F)cc4)CN1)[S](=O)(=O)c5ccccc5
CKS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C[C@@H]1CN([C@H](CN1)CCc2c(cccc2F)NC(=O)CC(c3ccc(cc3)F)c4ccc(cc4)F)S(=O)(=O)c5ccccc5
CKS SMILES "OpenEye OEToolkits" 2.0.6 CC1CN(C(CN1)CCc2c(cccc2F)NC(=O)CC(c3ccc(cc3)F)c4ccc(cc4)F)S(=O)(=O)c5ccccc5
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CKS "SYSTEMATIC NAME" ACDLabs 12.01 N-(3-fluoro-2-{2-[(2S,5R)-5-methyl-1-(phenylsulfonyl)piperazin-2-yl]ethyl}phenyl)-3,3-bis(4-fluorophenyl)propanamide
CKS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[3-fluoranyl-2-[2-[(2~{S},5~{R})-5-methyl-1-(phenylsulfonyl)piperazin-2-yl]ethyl]phenyl]-3,3-bis(4-fluorophenyl)propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CKS 'Create component' 2017-09-27 RCSB
CKS 'Initial release' 2018-01-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CKS C2 C 12.093 3.285 1
CKS C7 C 14.691 -1.215 2
CKS C9 C 13.392 -3.465 3
CKS C10 C 12.093 -2.715 4
CKS C11 C 12.093 -1.215 5
CKS C12 C 9.495 3.285 6
CKS C13 C 8.196 2.535 7
CKS C15 C 6.897 0.285 8
CKS C18 C 6.897 3.285 9
CKS N19 N 9.495 0.285 10
CKS C20 C 9.495 -1.215 11
CKS C22 C 8.196 -1.965 12
CKS C8 C 14.691 -2.715 13
CKS C16 C 5.598 1.035 14
CKS C26 C 9.495 -5.715 15
CKS C30 C 10.794 -3.465 16
CKS C31 C 5.598 -3.465 17
CKS C35 C 6.897 -5.715 18
CKS C17 C 5.598 2.535 19
CKS C27 C 10.794 -6.465 20
CKS C29 C 12.093 -4.215 21
CKS C32 C 4.299 -4.215 22
CKS C34 C 5.598 -6.465 23
CKS C25 C 9.495 -4.215 24
CKS C24 C 6.897 -4.215 25
CKS C14 C 8.196 1.035 26
CKS C28 C 12.093 -5.715 27
CKS C33 C 4.299 -5.715 28
CKS C6 C 13.392 -0.465 29
CKS C38 C 14.691 3.285 30
CKS C1 C 12.093 4.785 31
CKS C C 14.691 4.785 32
CKS C39 C 15.990 5.535 33
CKS C4 C 10.794 2.535 34
CKS C23 C 8.196 -3.465 35
CKS N3 N 13.392 2.535 36
CKS N N 13.392 5.535 37
CKS O21 O 10.794 -1.965 38
CKS O O 14.892 1.035 39
CKS O5 O 11.892 1.035 40
CKS F37 F 13.392 -6.465 41
CKS F36 F 3.000 -6.465 42
CKS F F 6.897 4.785 43
CKS S S 13.392 1.035 44
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CKS F36 C33 SINGLE NONE 1
CKS C33 C32 SINGLE NONE 2
CKS C33 C34 DOUBLE NONE 3
CKS C32 C31 DOUBLE NONE 4
CKS C34 C35 SINGLE NONE 5
CKS C31 C24 SINGLE NONE 6
CKS C35 C24 DOUBLE NONE 7
CKS F37 C28 SINGLE NONE 8
CKS C27 C28 SINGLE NONE 9
CKS C27 C26 DOUBLE NONE 10
CKS C24 C23 SINGLE NONE 11
CKS C28 C29 DOUBLE NONE 12
CKS C26 C25 SINGLE NONE 13
CKS C29 C30 SINGLE NONE 14
CKS C10 C9 DOUBLE NONE 15
CKS C10 C11 SINGLE NONE 16
CKS C25 C30 DOUBLE NONE 17
CKS C25 C23 SINGLE NONE 18
CKS C9 C8 SINGLE NONE 19
CKS C23 C22 SINGLE NONE 20
CKS C11 C6 DOUBLE NONE 21
CKS C22 C20 SINGLE NONE 22
CKS C8 C7 DOUBLE NONE 23
CKS O S DOUBLE NONE 24
CKS C6 C7 SINGLE NONE 25
CKS C6 S SINGLE NONE 26
CKS C20 N19 SINGLE NONE 27
CKS C20 O21 DOUBLE NONE 28
CKS S O5 DOUBLE NONE 29
CKS S N3 SINGLE NONE 30
CKS C1 C2 SINGLE NONE 31
CKS C1 N SINGLE NONE 32
CKS C2 N3 SINGLE NONE 33
CKS C2 C4 SINGLE BEGINWEDGE 34
CKS N19 C14 SINGLE NONE 35
CKS C C39 SINGLE BEGINDASH 36
CKS N3 C38 SINGLE NONE 37
CKS C12 C4 SINGLE NONE 38
CKS C12 C13 SINGLE NONE 39
CKS N C SINGLE NONE 40
CKS C C38 SINGLE NONE 41
CKS C14 C13 SINGLE NONE 42
CKS C14 C15 DOUBLE NONE 43
CKS C13 C18 DOUBLE NONE 44
CKS C15 C16 SINGLE NONE 45
CKS C18 F SINGLE NONE 46
CKS C18 C17 SINGLE NONE 47
CKS C16 C17 DOUBLE NONE 48
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CKS MurckoScaffold S1 scaffold 'O=C(CC(c1ccccc1)c1ccccc1)Nc1ccccc1CC[C@H]1CNCCN1S(=O)(=O)c1ccccc1' InChI=1S/C33H35N3O3S/c37-33(24-31(26-12-4-1-5-13-26)27-14-6-2-7-15-27)35-32-19-11-10-16-28(32)20-21-29-25-34-22-23-36(29)40(38,39)30-17-8-3-9-18-30/h1-19,29,31,34H,20-25H2,(H,35,37)/t29-/m0/s1 VVKNMIBWRGAPIP-LJAQVGFWSA-N
CKS amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
CKS phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
CKS piperazine F3 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CKS C2 S1 1
CKS C7 S1 1
CKS C9 S1 1
CKS C10 S1 1
CKS C11 S1 1
CKS C12 S1 1
CKS C13 S1 1
CKS C15 S1 1
CKS C18 S1 1
CKS N19 S1 1
CKS C20 S1 1
CKS C22 S1 1
CKS C8 S1 1
CKS C16 S1 1
CKS C26 S1 1
CKS C30 S1 1
CKS C31 S1 1
CKS C35 S1 1
CKS C17 S1 1
CKS C27 S1 1
CKS C29 S1 1
CKS C32 S1 1
CKS C34 S1 1
CKS C25 S1 1
CKS C24 S1 1
CKS C14 S1 1
CKS C28 S1 1
CKS C33 S1 1
CKS C6 S1 1
CKS C38 S1 1
CKS C1 S1 1
CKS C S1 1
CKS C4 S1 1
CKS C23 S1 1
CKS N3 S1 1
CKS N S1 1
CKS O21 S1 1
CKS O S1 1
CKS O5 S1 1
CKS S S1 1
CKS N19 F1 1
CKS C20 F1 1
CKS O21 F1 1
CKS C22 F1 1
CKS C7 F2 1
CKS C8 F2 1
CKS C9 F2 1
CKS C10 F2 1
CKS C11 F2 1
CKS C6 F2 1
CKS C13 F2 2
CKS C14 F2 2
CKS C15 F2 2
CKS C16 F2 2
CKS C17 F2 2
CKS C18 F2 2
CKS C26 F2 3
CKS C27 F2 3
CKS C28 F2 3
CKS C29 F2 3
CKS C30 F2 3
CKS C25 F2 3
CKS C31 F2 4
CKS C32 F2 4
CKS C33 F2 4
CKS C34 F2 4
CKS C35 F2 4
CKS C24 F2 4
CKS N3 F3 1
CKS C2 F3 1
CKS C1 F3 1
CKS N F3 1
CKS C F3 1
CKS C38 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id CKS
_pdbe_chem_comp_rdkit_properties.exactmw 621.227
_pdbe_chem_comp_rdkit_properties.amw 621.725
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 44
_pdbe_chem_comp_rdkit_properties.NumAtoms 78
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.265
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 303.410
_pdbe_chem_comp_rdkit_properties.tpsa 78.510
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.596
_pdbe_chem_comp_rdkit_properties.CrippenMR 163.145
_pdbe_chem_comp_rdkit_properties.chi0v 21.925
_pdbe_chem_comp_rdkit_properties.chi1v 12.773
_pdbe_chem_comp_rdkit_properties.chi2v 6.384
_pdbe_chem_comp_rdkit_properties.chi3v 6.384
_pdbe_chem_comp_rdkit_properties.chi4v 4.150
_pdbe_chem_comp_rdkit_properties.chi0n 55.109
_pdbe_chem_comp_rdkit_properties.chi1n 28.227
_pdbe_chem_comp_rdkit_properties.chi2n 4.909
_pdbe_chem_comp_rdkit_properties.chi3n 4.909
_pdbe_chem_comp_rdkit_properties.chi4n 3.074
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.990
_pdbe_chem_comp_rdkit_properties.kappa1 10.005
_pdbe_chem_comp_rdkit_properties.kappa2 13.755
_pdbe_chem_comp_rdkit_properties.kappa3 7.377
_pdbe_chem_comp_rdkit_properties.Phi 3.128
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CKS UniChem ChEMBL CHEMBL4159254
CKS UniChem PDBe CKS
CKS UniChem SureChEMBL SCHEMBL16439536
CKS UniChem PubChem 117852957
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CKS C2 1.939 0.519 0.429 ETKDGv3 1
CKS C7 5.695 1.735 -1.686 ETKDGv3 2
CKS C9 4.944 2.630 -3.829 ETKDGv3 3
CKS C10 3.943 1.744 -3.892 ETKDGv3 4
CKS C11 3.752 0.763 -2.803 ETKDGv3 5
CKS C12 1.138 -1.028 2.297 ETKDGv3 6
CKS C13 0.005 -1.271 3.267 ETKDGv3 7
CKS C15 -2.306 -1.995 3.672 ETKDGv3 8
CKS C18 0.130 -0.892 4.556 ETKDGv3 9
CKS N19 -1.473 -2.195 1.406 ETKDGv3 10
CKS C20 -2.358 -3.216 0.920 ETKDGv3 11
CKS C22 -2.832 -3.176 -0.506 ETKDGv3 12
CKS C8 5.864 2.624 -2.672 ETKDGv3 13
CKS C16 -2.140 -1.605 5.084 ETKDGv3 14
CKS C26 -2.363 -0.148 -1.435 ETKDGv3 15
CKS C30 -3.800 0.056 0.530 ETKDGv3 16
CKS C31 -6.106 -1.861 -2.075 ETKDGv3 17
CKS C35 -4.037 -2.544 -3.178 ETKDGv3 18
CKS C17 -0.985 -1.083 5.503 ETKDGv3 19
CKS C27 -1.858 1.076 -1.237 ETKDGv3 20
CKS C29 -3.241 1.407 0.742 ETKDGv3 21
CKS C32 -6.778 -1.899 -3.232 ETKDGv3 22
CKS C34 -4.785 -2.589 -4.451 ETKDGv3 23
CKS C25 -3.391 -0.699 -0.509 ETKDGv3 24
CKS C24 -4.662 -2.214 -2.027 ETKDGv3 25
CKS C14 -1.290 -1.863 2.797 ETKDGv3 26
CKS C28 -2.320 1.893 -0.098 ETKDGv3 27
CKS C33 -6.087 -2.285 -4.478 ETKDGv3 28
CKS C6 4.580 0.760 -1.746 ETKDGv3 29
CKS C38 3.986 1.435 1.551 ETKDGv3 30
CKS C1 1.717 1.890 -0.272 ETKDGv3 31
CKS C 3.421 2.813 1.142 ETKDGv3 32
CKS C39 4.498 3.899 1.254 ETKDGv3 33
CKS C4 0.994 0.353 1.637 ETKDGv3 34
CKS C23 -3.932 -2.105 -0.698 ETKDGv3 35
CKS N3 3.341 0.299 0.853 ETKDGv3 36
CKS N 2.905 2.749 -0.226 ETKDGv3 37
CKS O21 -2.743 -4.146 1.678 ETKDGv3 38
CKS O 3.695 -1.628 -0.950 ETKDGv3 39
CKS O5 5.679 -0.755 0.145 ETKDGv3 40
CKS F37 -1.809 3.133 0.096 ETKDGv3 41
CKS F36 -6.772 -2.324 -5.647 ETKDGv3 42
CKS F 1.274 -0.317 5.008 ETKDGv3 43
CKS S 4.338 -0.376 -0.420 ETKDGv3 44
CKS H1 1.640 -0.271 -0.296 ETKDGv3 45
CKS H2 6.371 1.737 -0.842 ETKDGv3 46
CKS H3 5.084 3.351 -4.624 ETKDGv3 47
CKS H4 3.268 1.747 -4.738 ETKDGv3 48
CKS H5 2.927 0.065 -2.863 ETKDGv3 49
CKS H6 2.118 -1.092 2.819 ETKDGv3 50
CKS H7 1.153 -1.830 1.528 ETKDGv3 51
CKS H8 -3.276 -2.353 3.354 ETKDGv3 52
CKS H9 -0.956 -1.640 0.689 ETKDGv3 53
CKS H10 -3.237 -4.175 -0.781 ETKDGv3 54
CKS H11 -1.959 -2.976 -1.162 ETKDGv3 55
CKS H12 6.674 3.340 -2.625 ETKDGv3 56
CKS H13 -2.961 -1.733 5.777 ETKDGv3 57
CKS H14 -2.006 -0.736 -2.269 ETKDGv3 58
CKS H15 -4.533 -0.317 1.234 ETKDGv3 59
CKS H16 -6.623 -1.568 -1.170 ETKDGv3 60
CKS H17 -2.982 -2.778 -3.201 ETKDGv3 61
CKS H18 -0.868 -0.789 6.538 ETKDGv3 62
CKS H19 -1.108 1.468 -1.911 ETKDGv3 63
CKS H20 -3.578 2.001 1.582 ETKDGv3 64
CKS H21 -7.829 -1.641 -3.257 ETKDGv3 65
CKS H22 -4.273 -2.868 -5.364 ETKDGv3 66
CKS H23 5.088 1.407 1.405 ETKDGv3 67
CKS H24 3.831 1.304 2.644 ETKDGv3 68
CKS H25 1.459 1.713 -1.339 ETKDGv3 69
CKS H26 0.849 2.432 0.167 ETKDGv3 70
CKS H27 2.599 3.093 1.842 ETKDGv3 71
CKS H28 4.916 3.919 2.283 ETKDGv3 72
CKS H29 5.321 3.710 0.532 ETKDGv3 73
CKS H30 4.059 4.896 1.038 ETKDGv3 74
CKS H31 -0.053 0.488 1.290 ETKDGv3 75
CKS H32 1.198 1.140 2.395 ETKDGv3 76
CKS H33 -4.693 -2.314 0.090 ETKDGv3 77
CKS H34 2.607 3.707 -0.526 ETKDGv3 78
#