data_CLA
#
_chem_comp.id CLA
_chem_comp.name "CHLOROPHYLL A"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C55 H72 Mg N4 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2021-06-25
_chem_comp.pdbx_ambiguous_flag Y
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 893.489
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CLA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1JB0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CLA MG MG MG 0 0 N N N N N N 72.794 131.018 77.144 6.551 -0.444 -0.020 MG CLA 1
CLA CHA CHA C 0 1 N N N N N N 73.260 130.256 73.757 4.542 2.043 -0.379 CHA CLA 2
CLA CHB CHB C 0 1 N N N N N N 75.448 133.099 76.995 5.599 -0.751 2.954 CHB CLA 3
CLA CHC CHC C 0 1 N N N N N N 71.903 132.500 80.188 8.633 -2.819 0.324 CHC CLA 4
CLA CHD CHD C 0 1 N N N N N N 69.718 129.450 76.997 7.654 -0.075 -3.004 CHD CLA 5
CLA NA "N A" N 0 1 N N N N N N 74.173 131.612 75.567 4.849 -0.079 0.745 NA CLA 6
CLA C1A C1A C 0 1 N N N N N N 74.226 131.081 74.289 4.093 0.981 0.410 C1A CLA 7
CLA C2A C2A C 0 1 N N S N N N 75.451 131.585 73.569 2.796 0.843 1.170 C2A CLA 8
CLA C3A C3A C 0 1 N N S N N N 76.142 132.454 74.620 3.128 -0.282 2.196 C3A CLA 9
CLA C4A C4A C 0 1 N N N N N N 75.224 132.392 75.813 4.627 -0.411 2.027 C4A CLA 10
CLA CMA CMA C 0 1 N N N N N N 77.504 131.851 74.982 2.771 0.151 3.619 CMA CLA 11
CLA CAA CAA C 0 1 N N N N N N 75.049 132.427 72.305 1.663 0.411 0.238 CAA CLA 12
CLA CBA CBA C 0 1 N N N N N N 75.008 133.895 72.462 0.342 0.401 1.011 CBA CLA 13
CLA CGA CGA C 0 1 N N N N N N 73.928 134.544 71.716 -0.774 -0.024 0.093 CGA CLA 14
CLA O1A O1A O 0 1 N N N N N N 72.827 134.606 72.213 -0.538 -0.292 -1.062 O1A CLA 15
CLA O2A O2A O 0 1 N N N N N N 74.133 135.091 70.509 -2.031 -0.105 0.557 O2A CLA 16
CLA NB "N B" N 0 1 Y N N N N N 73.537 132.567 78.352 7.505 -1.039 1.506 NB CLA 17
CLA C1B C1B C 0 1 Y N N N N N 74.701 133.205 78.103 6.966 -1.004 2.779 C1B CLA 18
CLA C2B C2B C 0 1 Y N N N N N 74.993 134.121 79.191 8.062 -1.328 3.561 C2B CLA 19
CLA C3B C3B C 0 1 Y N N N N N 74.004 133.997 80.113 9.039 -1.926 2.734 C3B CLA 20
CLA C4B C4B C 0 1 Y N N N N N 73.077 132.961 79.599 8.492 -2.008 1.439 C4B CLA 21
CLA CMB CMB C 0 1 N N N N N N 76.165 135.065 79.200 8.191 -1.083 5.042 CMB CLA 22
CLA CAB CAB C 0 1 N N N N N N 74.035 134.977 81.249 10.378 -2.378 3.149 CAB CLA 23
CLA CBB CBB C 0 1 N N N N N N 73.422 134.812 82.347 11.170 -1.564 3.840 CBB CLA 24
CLA NC "N C" N 0 1 N N N N N N 71.074 131.010 78.367 7.173 -1.728 -1.271 NC CLA 25
CLA C1C C1C C 0 1 N N N N N N 70.972 131.582 79.612 7.945 -2.763 -0.913 C1C CLA 26
CLA C2C C2C C 0 1 N N N N N N 69.756 131.098 80.250 7.964 -3.536 -2.092 C2C CLA 27
CLA C3C C3C C 0 1 N N N N N N 69.138 130.234 79.370 7.669 -2.671 -3.128 C3C CLA 28
CLA C4C C4C C 0 1 N N N N N N 69.979 130.187 78.167 7.473 -1.400 -2.541 C4C CLA 29
CLA CMC CMC C 0 1 N N N N N N 69.263 131.521 81.612 8.249 -5.012 -2.201 CMC CLA 30
CLA CAC CAC C 0 1 N N N N N N 67.877 129.437 79.571 7.576 -3.014 -4.593 CAC CLA 31
CLA CBC CBC C 0 1 N N N N N N 66.748 129.956 78.658 6.118 -3.298 -4.958 CBC CLA 32
CLA ND "N D" N 0 1 N N R N N N 71.660 130.096 75.722 6.760 1.087 -1.121 ND CLA 33
CLA C1D C1D C 0 1 N N N N N N 70.506 129.417 75.821 7.290 1.123 -2.388 C1D CLA 34
CLA C2D C2D C 0 1 N N N N N N 70.194 128.732 74.614 7.088 2.453 -2.757 C2D CLA 35
CLA C3D C3D C 0 1 N N N N N N 71.260 129.020 73.756 6.061 3.010 -1.974 C3D CLA 36
CLA C4D C4D C 0 1 N N N N N N 72.137 129.847 74.465 5.792 2.030 -1.032 C4D CLA 37
CLA CMD CMD C 0 1 N N N N N N 68.964 127.853 74.306 7.853 3.181 -3.831 CMD CLA 38
CLA CAD CAD C 0 1 N N N N N N 71.845 128.770 72.463 5.056 4.033 -1.676 CAD CLA 39
CLA OBD OBD O 0 1 N N N N N N 71.435 128.110 71.493 5.050 5.176 -2.085 OBD CLA 40
CLA CBD CBD C 0 1 N N R N N N 73.233 129.465 72.442 4.015 3.394 -0.753 CBD CLA 41
CLA CGD CGD C 0 1 N N N N N N 74.312 128.363 72.426 3.836 4.238 0.483 CGD CLA 42
CLA O1D O1D O 0 1 N N N N N N 74.532 127.700 73.414 4.109 3.784 1.569 O1D CLA 43
CLA O2D O2D O 0 1 N N N N N N 74.970 128.145 71.305 3.371 5.493 0.378 O2D CLA 44
CLA CED CED C 0 1 N N N N N N 75.536 126.852 71.036 3.223 6.247 1.610 CED CLA 45
CLA C1 C1 C 0 1 N N N N N N 73.028 135.816 69.842 -3.056 -0.522 -0.384 C1 CLA 46
CLA C2 C2 C 0 1 N N N N N N 72.239 134.795 69.017 -4.392 -0.555 0.312 C2 CLA 47
CLA C3 C3 C 0 1 N N N N N N 72.651 133.940 68.062 -5.201 -1.569 0.129 C3 CLA 48
CLA C4 C4 C 0 1 N N N N N N 74.104 133.887 67.566 -4.853 -2.639 -0.873 C4 CLA 49
CLA C5 C5 C 0 1 N N N N N N 71.735 132.948 67.319 -6.480 -1.665 0.920 C5 CLA 50
CLA C6 C6 C 0 1 N N N N N N 70.419 132.608 68.026 -7.630 -1.071 0.105 C6 CLA 51
CLA C7 C7 C 0 1 N N N N N N 70.617 131.890 69.338 -8.929 -1.169 0.909 C7 CLA 52
CLA C8 C8 C 0 1 N N R N N N 69.463 132.155 70.320 -10.079 -0.575 0.094 C8 CLA 53
CLA C9 C9 C 0 1 N N N N N N 69.900 131.877 71.753 -9.840 0.923 -0.108 C9 CLA 54
CLA C10 C10 C 0 1 N N N N N N 68.305 131.263 69.936 -11.396 -0.785 0.844 C10 CLA 55
CLA C11 C11 C 0 1 N N N N N N 66.894 131.816 70.018 -12.560 -0.303 -0.026 C11 CLA 56
CLA C12 C12 C 0 1 N N N N N N 66.082 130.778 69.215 -13.877 -0.513 0.724 C12 CLA 57
CLA C13 C13 C 0 1 N N R N N N 64.762 130.213 69.787 -15.041 -0.032 -0.146 C13 CLA 58
CLA C14 C14 C 0 1 N N N N N N 63.621 131.230 69.688 -14.930 1.480 -0.354 C14 CLA 59
CLA C15 C15 C 0 1 N N N N N N 64.973 129.736 71.247 -16.365 -0.355 0.550 C15 CLA 60
CLA C16 C16 C 0 1 N N N N N N 65.922 128.565 71.486 -17.528 0.012 -0.373 C16 CLA 61
CLA C17 C17 C 0 1 N N N N N N 65.405 127.211 71.051 -18.852 -0.311 0.322 C17 CLA 62
CLA C18 C18 C 0 1 N N N N N N 65.636 126.115 72.098 -20.016 0.057 -0.601 C18 CLA 63
CLA C19 C19 C 0 1 N N N N N N 64.480 126.014 73.076 -19.983 -0.836 -1.843 C19 CLA 64
CLA C20 C20 C 0 1 N N N N N N 65.840 124.785 71.406 -21.339 -0.149 0.140 C20 CLA 65
CLA HHB HHB H 0 1 N N N N N N 76.376 133.652 77.021 5.248 -0.833 3.971 HHB CLA 66
CLA HHC HHC H 0 1 N N N N N N 71.674 132.872 81.176 9.372 -3.602 0.409 HHC CLA 67
CLA HHD HHD H 0 1 N N N N N N 68.823 128.846 76.996 8.140 0.022 -3.964 HHD CLA 68
CLA H2A H2A H 0 1 N N N N N N 76.101 130.749 73.272 2.546 1.772 1.682 H2A CLA 69
CLA H3A H3A H 0 1 N N N N N N 76.256 133.487 74.260 2.624 -1.212 1.934 H3A CLA 70
CLA HMA1 HMA1 H 0 0 N N N N N N 77.995 132.481 75.738 1.705 0.371 3.676 HMA1 CLA 71
CLA HMA2 HMA2 H 0 0 N N N N N N 77.361 130.838 75.386 3.013 -0.653 4.315 HMA2 CLA 72
CLA HMA3 HMA3 H 0 0 N N N N N N 78.134 131.801 74.081 3.341 1.042 3.882 HMA3 CLA 73
CLA HAA1 HAA1 H 0 0 N N N N N N 75.774 132.199 71.510 1.591 1.110 -0.595 HAA1 CLA 74
CLA HAA2 HAA2 H 0 0 N N N N N N 74.047 132.099 71.993 1.867 -0.589 -0.144 HAA2 CLA 75
CLA HBA1 HBA1 H 0 0 N N N N N N 74.878 134.125 73.530 0.414 -0.298 1.844 HBA1 CLA 76
CLA HBA2 HBA2 H 0 0 N N N N N N 75.966 134.307 72.112 0.138 1.401 1.393 HBA2 CLA 77
CLA HMB1 HMB1 H 0 0 N N N N N N 75.877 136.013 78.721 7.814 -1.949 5.587 HMB1 CLA 78
CLA HMB2 HMB2 H 0 0 N N N N N N 76.473 135.258 80.238 9.239 -0.923 5.294 HMB2 CLA 79
CLA HMB3 HMB3 H 0 0 N N N N N N 77.003 134.615 78.647 7.612 -0.201 5.316 HMB3 CLA 80
CLA HAB HAB H 0 1 N N N N N N 74.616 135.879 81.124 10.717 -3.371 2.892 HAB CLA 81
CLA HBB1 HBB1 H 0 0 N N N N N N 73.490 135.562 83.121 12.152 -1.896 4.144 HBB1 CLA 82
CLA HBB2 HBB2 H 0 0 N N N N N N 72.832 133.922 82.507 10.832 -0.571 4.097 HBB2 CLA 83
CLA HMC1 HMC1 H 0 0 N N N N N N 68.323 130.998 81.841 7.317 -5.570 -2.111 HMC1 CLA 84
CLA HMC2 HMC2 H 0 0 N N N N N N 70.018 131.266 82.370 8.708 -5.224 -3.167 HMC2 CLA 85
CLA HMC3 HMC3 H 0 0 N N N N N N 69.089 132.607 81.618 8.930 -5.310 -1.403 HMC3 CLA 86
CLA HAC1 HAC1 H 0 0 N N N N N N 68.076 128.382 79.333 7.943 -2.176 -5.186 HAC1 CLA 87
CLA HAC2 HAC2 H 0 0 N N N N N N 67.560 129.523 80.621 8.182 -3.897 -4.798 HAC2 CLA 88
CLA HBC1 HBC1 H 0 0 N N N N N N 65.839 129.359 78.823 6.051 -3.546 -6.018 HBC1 CLA 89
CLA HBC2 HBC2 H 0 0 N N N N N N 66.542 131.011 78.893 5.752 -4.136 -4.365 HBC2 CLA 90
CLA HBC3 HBC3 H 0 0 N N N N N N 67.058 129.869 77.606 5.513 -2.415 -4.753 HBC3 CLA 91
CLA HMD1 HMD1 H 0 0 N N N N N N 69.033 127.473 73.276 7.344 3.058 -4.787 HMD1 CLA 92
CLA HMD2 HMD2 H 0 0 N N N N N N 68.934 127.006 75.007 7.908 4.241 -3.583 HMD2 CLA 93
CLA HMD3 HMD3 H 0 0 N N N N N N 68.048 128.453 74.415 8.861 2.772 -3.901 HMD3 CLA 94
CLA HBD HBD H 0 1 N N N N N N 73.330 130.131 71.572 3.065 3.292 -1.276 HBD CLA 95
CLA HED1 HED1 H 0 0 N N N N N N 76.041 126.868 70.059 2.526 5.731 2.270 HED1 CLA 96
CLA HED2 HED2 H 0 0 N N N N N N 76.264 126.600 71.821 4.193 6.333 2.101 HED2 CLA 97
CLA HED3 HED3 H 0 0 N N N N N N 74.736 126.097 71.022 2.841 7.242 1.383 HED3 CLA 98
CLA H11 H11 H 0 1 N N N N N N 72.372 136.277 70.596 -3.095 0.184 -1.214 H11 CLA 99
CLA H12 H12 H 0 1 N N N N N N 73.435 136.597 69.183 -2.819 -1.516 -0.763 H12 CLA 100
CLA H2 H2 H 0 1 N N N N N N 71.182 134.754 69.237 -4.684 0.258 0.961 H2 CLA 101
CLA H41 H41 H 0 1 N N N N N N 74.199 133.115 66.788 -4.201 -3.377 -0.405 H41 CLA 102
CLA H42 H42 H 0 1 N N N N N N 74.384 134.865 67.147 -5.765 -3.126 -1.217 H42 CLA 103
CLA H43 H43 H 0 1 N N N N N N 74.770 133.644 68.407 -4.340 -2.188 -1.723 H43 CLA 104
CLA H51 H51 H 0 1 N N N N N N 71.490 133.382 66.338 -6.693 -2.711 1.140 H51 CLA 105
CLA H52 H52 H 0 1 N N N N N N 72.295 132.012 67.176 -6.372 -1.112 1.854 H52 CLA 106
CLA H61 H61 H 0 1 N N N N N N 69.874 133.544 68.218 -7.417 -0.025 -0.115 H61 CLA 107
CLA H62 H62 H 0 1 N N N N N N 69.822 131.965 67.363 -7.738 -1.624 -0.828 H62 CLA 108
CLA H71 H71 H 0 1 N N N N N N 70.678 130.809 69.145 -9.142 -2.215 1.129 H71 CLA 109
CLA H72 H72 H 0 1 N N N N N N 71.557 132.235 69.793 -8.821 -0.616 1.842 H72 CLA 110
CLA H8 H8 H 0 1 N N N N N N 69.155 133.208 70.234 -10.130 -1.069 -0.876 H8 CLA 111
CLA H91 H91 H 0 1 N N N N N N 69.061 132.073 72.437 -8.902 1.072 -0.642 H91 CLA 112
CLA H92 H92 H 0 1 N N N N N N 70.210 130.826 71.844 -10.660 1.346 -0.689 H92 CLA 113
CLA H93 H93 H 0 1 N N N N N N 70.745 132.532 72.012 -9.789 1.417 0.862 H93 CLA 114
CLA H101 H101 H 0 0 N N N N N N 68.469 130.951 68.894 -11.523 -1.844 1.066 H101 CLA 115
CLA H102 H102 H 0 0 N N N N N N 68.345 130.382 70.593 -11.379 -0.218 1.774 H102 CLA 116
CLA H111 H111 H 0 0 N N N N N N 66.548 131.871 71.061 -12.433 0.756 -0.248 H111 CLA 117
CLA H112 H112 H 0 0 N N N N N N 66.830 132.813 69.558 -12.577 -0.871 -0.956 H112 CLA 118
CLA H121 H121 H 0 0 N N N N N N 65.835 131.246 68.251 -14.004 -1.573 0.946 H121 CLA 119
CLA H122 H122 H 0 0 N N N N N N 66.747 129.918 69.045 -13.860 0.054 1.654 H122 CLA 120
CLA H13 H13 H 0 1 N N N N N N 64.485 129.335 69.185 -15.005 -0.535 -1.112 H13 CLA 121
CLA H141 H141 H 0 0 N N N N N N 62.702 130.792 70.104 -14.965 1.984 0.612 H141 CLA 122
CLA H142 H142 H 0 0 N N N N N N 63.886 132.134 70.256 -13.987 1.710 -0.850 H142 CLA 123
CLA H143 H143 H 0 0 N N N N N N 63.456 131.495 68.633 -15.759 1.823 -0.974 H143 CLA 124
CLA H151 H151 H 0 0 N N N N N N 65.359 130.593 71.819 -16.404 -1.420 0.778 H151 CLA 125
CLA H152 H152 H 0 0 N N N N N N 63.988 129.445 71.642 -16.439 0.218 1.474 H152 CLA 126
CLA H161 H161 H 0 0 N N N N N N 66.853 128.765 70.936 -17.488 1.077 -0.602 H161 CLA 127
CLA H162 H162 H 0 0 N N N N N N 66.136 128.516 72.564 -17.454 -0.561 -1.298 H162 CLA 128
CLA H171 H171 H 0 0 N N N N N N 64.324 127.293 70.862 -18.892 -1.376 0.551 H171 CLA 129
CLA H172 H172 H 0 0 N N N N N N 65.919 126.922 70.122 -18.927 0.262 1.246 H172 CLA 130
CLA H18 H18 H 0 1 N N N N N N 66.549 126.361 72.660 -19.926 1.101 -0.900 H18 CLA 131
CLA H191 H191 H 0 0 N N N N N N 64.686 125.218 73.807 -20.073 -1.880 -1.543 H191 CLA 132
CLA H192 H192 H 0 0 N N N N N N 64.360 126.973 73.602 -20.812 -0.574 -2.501 H192 CLA 133
CLA H193 H193 H 0 0 N N N N N N 63.556 125.778 72.528 -19.041 -0.689 -2.371 H193 CLA 134
CLA H201 H201 H 0 0 N N N N N N 66.005 124.001 72.159 -21.362 0.486 1.025 H201 CLA 135
CLA H202 H202 H 0 0 N N N N N N 64.947 124.540 70.812 -22.168 0.112 -0.517 H202 CLA 136
CLA H203 H203 H 0 0 N N N N N N 66.716 124.847 70.743 -21.429 -1.193 0.440 H203 CLA 137
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CLA MG NA SING N N 1
CLA MG NB SING N N 2
CLA MG NC SING N N 3
CLA MG ND SING N N 4
CLA CHA C1A SING N N 5
CLA CHA C4D DOUB N N 6
CLA CHA CBD SING N N 7
CLA CHB C4A DOUB N N 8
CLA CHB C1B SING N N 9
CLA CHB HHB SING N N 10
CLA CHC C4B SING N N 11
CLA CHC C1C DOUB N N 12
CLA CHC HHC SING N N 13
CLA CHD C4C SING N N 14
CLA CHD C1D DOUB N N 15
CLA CHD HHD SING N N 16
CLA NA C1A DOUB N N 17
CLA NA C4A SING N N 18
CLA C1A C2A SING N N 19
CLA C2A C3A SING N N 20
CLA C2A CAA SING N N 21
CLA C2A H2A SING N N 22
CLA C3A C4A SING N N 23
CLA C3A CMA SING N N 24
CLA C3A H3A SING N N 25
CLA CMA HMA1 SING N N 26
CLA CMA HMA2 SING N N 27
CLA CMA HMA3 SING N N 28
CLA CAA CBA SING N N 29
CLA CAA HAA1 SING N N 30
CLA CAA HAA2 SING N N 31
CLA CBA CGA SING N N 32
CLA CBA HBA1 SING N N 33
CLA CBA HBA2 SING N N 34
CLA CGA O1A DOUB N N 35
CLA CGA O2A SING N N 36
CLA O2A C1 SING N N 37
CLA NB C1B SING Y N 38
CLA NB C4B SING Y N 39
CLA C1B C2B DOUB Y N 40
CLA C2B C3B SING Y N 41
CLA C2B CMB SING N N 42
CLA C3B C4B DOUB Y N 43
CLA C3B CAB SING N N 44
CLA CMB HMB1 SING N N 45
CLA CMB HMB2 SING N N 46
CLA CMB HMB3 SING N N 47
CLA CAB CBB DOUB N N 48
CLA CAB HAB SING N N 49
CLA CBB HBB1 SING N N 50
CLA CBB HBB2 SING N N 51
CLA NC C1C SING N N 52
CLA NC C4C DOUB N N 53
CLA C1C C2C SING N N 54
CLA C2C C3C DOUB N N 55
CLA C2C CMC SING N N 56
CLA C3C C4C SING N N 57
CLA C3C CAC SING N N 58
CLA CMC HMC1 SING N N 59
CLA CMC HMC2 SING N N 60
CLA CMC HMC3 SING N N 61
CLA CAC CBC SING N N 62
CLA CAC HAC1 SING N N 63
CLA CAC HAC2 SING N N 64
CLA CBC HBC1 SING N N 65
CLA CBC HBC2 SING N N 66
CLA CBC HBC3 SING N N 67
CLA ND C1D SING N N 68
CLA ND C4D SING N N 69
CLA C1D C2D SING N N 70
CLA C2D C3D DOUB N N 71
CLA C2D CMD SING N N 72
CLA C3D C4D SING N N 73
CLA C3D CAD SING N N 74
CLA CMD HMD1 SING N N 75
CLA CMD HMD2 SING N N 76
CLA CMD HMD3 SING N N 77
CLA CAD OBD DOUB N N 78
CLA CAD CBD SING N N 79
CLA CBD CGD SING N N 80
CLA CBD HBD SING N N 81
CLA CGD O1D DOUB N N 82
CLA CGD O2D SING N N 83
CLA O2D CED SING N N 84
CLA CED HED1 SING N N 85
CLA CED HED2 SING N N 86
CLA CED HED3 SING N N 87
CLA C1 C2 SING N N 88
CLA C1 H11 SING N N 89
CLA C1 H12 SING N N 90
CLA C2 C3 DOUB N E 91
CLA C2 H2 SING N N 92
CLA C3 C4 SING N N 93
CLA C3 C5 SING N N 94
CLA C4 H41 SING N N 95
CLA C4 H42 SING N N 96
CLA C4 H43 SING N N 97
CLA C5 C6 SING N N 98
CLA C5 H51 SING N N 99
CLA C5 H52 SING N N 100
CLA C6 C7 SING N N 101
CLA C6 H61 SING N N 102
CLA C6 H62 SING N N 103
CLA C7 C8 SING N N 104
CLA C7 H71 SING N N 105
CLA C7 H72 SING N N 106
CLA C8 C9 SING N N 107
CLA C8 C10 SING N N 108
CLA C8 H8 SING N N 109
CLA C9 H91 SING N N 110
CLA C9 H92 SING N N 111
CLA C9 H93 SING N N 112
CLA C10 C11 SING N N 113
CLA C10 H101 SING N N 114
CLA C10 H102 SING N N 115
CLA C11 C12 SING N N 116
CLA C11 H111 SING N N 117
CLA C11 H112 SING N N 118
CLA C12 C13 SING N N 119
CLA C12 H121 SING N N 120
CLA C12 H122 SING N N 121
CLA C13 C14 SING N N 122
CLA C13 C15 SING N N 123
CLA C13 H13 SING N N 124
CLA C14 H141 SING N N 125
CLA C14 H142 SING N N 126
CLA C14 H143 SING N N 127
CLA C15 C16 SING N N 128
CLA C15 H151 SING N N 129
CLA C15 H152 SING N N 130
CLA C16 C17 SING N N 131
CLA C16 H161 SING N N 132
CLA C16 H162 SING N N 133
CLA C17 C18 SING N N 134
CLA C17 H171 SING N N 135
CLA C17 H172 SING N N 136
CLA C18 C19 SING N N 137
CLA C18 C20 SING N N 138
CLA C18 H18 SING N N 139
CLA C19 H191 SING N N 140
CLA C19 H192 SING N N 141
CLA C19 H193 SING N N 142
CLA C20 H201 SING N N 143
CLA C20 H202 SING N N 144
CLA C20 H203 SING N N 145
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CLA SMILES ACDLabs 12.01 O=C(OC)C1C(=O)C2=C(C)C3=CC=4C(CC)=C(C)C5=Cc6c(C=C)c(C)c7C=C8C(C)C(CCC(=O)OC\C=C(/C)CCCC(C)CCCC(C)CCCC(C)C)C=9C1=C2N3[Mg](n76)(N5=4)N8=9
CLA InChI InChI 1.03 InChI=1S/C55H73N4O5.Mg/c1-13-39-35(8)42-28-44-37(10)41(24-25-48(60)64-27-26-34(7)23-17-22-33(6)21-16-20-32(5)19-15-18-31(3)4)52(58-44)50-51(55(62)63-12)54(61)49-38(11)45(59-53(49)50)30-47-40(14-2)36(9)43(57-47)29-46(39)56-42;/h13,26,28-33,37,41,51H,1,14-25,27H2,2-12H3,(H-,56,57,58,59,61);/q-1;+2/p-1/b34-26+;/t32-,33-,37+,41+,51-;/m1./s1
CLA InChIKey InChI 1.03 ATNHDLDRLWWWCB-AENOIHSZSA-M
CLA SMILES_CANONICAL CACTVS 3.385 CCC1=C(C)C2=Cc3n4[Mg][N@@]5C(=CC1=N2)C(=C6C(=O)[C@H](C(=O)OC)C(=C56)C7=NC(=Cc4c(C)c3C=C)[C@@H](C)[C@@H]7CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C
CLA SMILES CACTVS 3.385 CCC1=C(C)C2=Cc3n4[Mg][N]5C(=CC1=N2)C(=C6C(=O)[CH](C(=O)OC)C(=C56)C7=NC(=Cc4c(C)c3C=C)[CH](C)[CH]7CCC(=O)OCC=C(C)CCC[CH](C)CCC[CH](C)CCCC(C)C)C
CLA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCC1=C(C2=Cc3c(c(c4n3[Mg]56[N]2=C1C=C7N5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C=C)C
CLA SMILES "OpenEye OEToolkits" 2.0.7 CCC1=C(C2=Cc3c(c(c4n3[Mg]56[N]2=C1C=C7N5C8=C(C(C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)C(C9CCC(=O)OCC=C(C)CCCC(C)CCCC(C)CCCC(C)C)C)C)C=C)C
#
_pdbx_chem_comp_identifier.comp_id CLA
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
"[methyl 9-ethenyl-14-ethyl-4,8,13,18-tetramethyl-20-oxo-3-{3-oxo-3-[(3,7,11,15-tetramethylhexadec-2-en-1-yl)oxy]propyl}phorbine-21-carboxylatato(2-)-kappa~4~N~23~,N~24~,N~25~,N~26~]magnesium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CLA 'Create component' 1999-07-08 ?
CLA 'Other modification' 2012-07-18 RCSB
CLA 'Other modification' 2021-06-25 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id CLA
_pdbe_chem_comp_drugbank_details.drugbank_id DB02133
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Chlorophyll A'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 479-61-8
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id CLA
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02133
_pdbe_chem_comp_drugbank_classification.parent Chlorins
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Tetrapyrroles and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as chlorins. These are large heterocyclic aromatic ring systems consisting, at the core, of three pyrroles and one pyrroline coupled through four methine linkages.'
#
_pdbe_chem_comp_drugbank_targets.comp_id CLA
_pdbe_chem_comp_drugbank_targets.drugbank_id DB02133
_pdbe_chem_comp_drugbank_targets.name 'Beta-lactamase 2'
_pdbe_chem_comp_drugbank_targets.organism 'Bacillus cereus'
_pdbe_chem_comp_drugbank_targets.uniprot_id P04190
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CLA MG Mg 9.919 -0.179 1
CLA CHA C 12.585 -2.603 2
CLA CHB C 12.537 2.374 3
CLA CHC C 7.366 2.374 4
CLA CHD C 7.414 -2.603 5
CLA NA N 12.149 -0.139 6
CLA C1A C 13.019 -1.203 7
CLA C2A C 14.374 -0.815 8
CLA C3A C 14.374 0.634 9
CLA C4A C 12.971 1.022 10
CLA CMA C 15.567 1.543 11
CLA CAA C 15.572 -1.718 12
CLA CBA C 16.952 -1.132 13
CLA CGA C 18.150 -2.035 14
CLA O1A O 17.967 -3.524 15
CLA O2A O 19.531 -1.449 16
CLA NB N 9.927 1.843 17
CLA C1B C 11.136 2.811 18
CLA C2B C 10.652 4.163 19
CLA C3B C 9.203 4.163 20
CLA C4B C 8.766 2.762 21
CLA CMB C 11.515 5.389 22
CLA CAB C 8.313 5.371 23
CLA CBB C 8.915 6.745 24
CLA NC N 7.799 -0.139 25
CLA C1C C 6.978 0.974 26
CLA C2C C 5.577 0.586 27
CLA C3C C 5.577 -0.863 28
CLA C4C C 6.978 -1.251 29
CLA CMC C 4.383 1.494 30
CLA CAC C 4.383 -1.771 31
CLA CBC C 3.000 -1.192 32
CLA ND N 9.976 -2.121 33
CLA C1D C 8.815 -3.039 34
CLA C2D C 9.251 -4.392 35
CLA C3D C 10.700 -4.392 36
CLA C4D C 11.136 -2.991 37
CLA CMD C 8.368 -5.604 38
CLA CAD C 11.911 -5.249 39
CLA OBD O 12.017 -6.745 40
CLA CBD C 13.393 -3.848 41
CLA CGD C 14.882 -4.026 42
CLA O1D O 15.781 -2.825 43
CLA O2D O 15.473 -5.404 44
CLA CED C 16.962 -5.582 45
CLA C1 C 20.729 -2.352 46
CLA C2 C 22.110 -1.767 47
CLA C3 C 23.307 -2.670 48
CLA C4 C 23.124 -4.158 49
CLA C5 C 24.688 -2.084 50
CLA C6 C 25.886 -2.987 51
CLA C7 C 27.267 -2.401 52
CLA C8 C 28.465 -3.304 53
CLA C9 C 28.281 -4.793 54
CLA C10 C 29.846 -2.718 55
CLA C11 C 31.043 -3.621 56
CLA C12 C 32.424 -3.035 57
CLA C13 C 33.622 -3.938 58
CLA C14 C 33.439 -5.427 59
CLA C15 C 35.003 -3.353 60
CLA C16 C 36.200 -4.256 61
CLA C17 C 37.581 -3.670 62
CLA C18 C 38.779 -4.573 63
CLA C19 C 40.160 -3.987 64
CLA C20 C 38.596 -6.062 65
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CLA MG NA SINGLE NONE 1
CLA MG NB SINGLE BEGINWEDGE 2
CLA MG NC SINGLE NONE 3
CLA MG ND SINGLE NONE 4
CLA CHA C1A SINGLE NONE 5
CLA CHA C4D DOUBLE NONE 6
CLA CHA CBD SINGLE NONE 7
CLA CHB C4A DOUBLE NONE 8
CLA CHB C1B SINGLE NONE 9
CLA CHC C4B SINGLE NONE 10
CLA CHC C1C DOUBLE NONE 11
CLA CHD C4C SINGLE NONE 12
CLA CHD C1D DOUBLE NONE 13
CLA NA C1A DOUBLE NONE 14
CLA NA C4A SINGLE NONE 15
CLA C1A C2A SINGLE NONE 16
CLA C2A C3A SINGLE NONE 17
CLA C2A CAA SINGLE BEGINDASH 18
CLA C3A C4A SINGLE NONE 19
CLA C3A CMA SINGLE BEGINWEDGE 20
CLA CAA CBA SINGLE NONE 21
CLA CBA CGA SINGLE NONE 22
CLA CGA O1A DOUBLE NONE 23
CLA CGA O2A SINGLE NONE 24
CLA O2A C1 SINGLE NONE 25
CLA NB C1B SINGLE NONE 26
CLA NB C4B SINGLE NONE 27
CLA C1B C2B DOUBLE NONE 28
CLA C2B C3B SINGLE NONE 29
CLA C2B CMB SINGLE NONE 30
CLA C3B C4B DOUBLE NONE 31
CLA C3B CAB SINGLE NONE 32
CLA CAB CBB DOUBLE NONE 33
CLA NC C1C SINGLE NONE 34
CLA NC C4C DOUBLE NONE 35
CLA C1C C2C SINGLE NONE 36
CLA C2C C3C DOUBLE NONE 37
CLA C2C CMC SINGLE NONE 38
CLA C3C C4C SINGLE NONE 39
CLA C3C CAC SINGLE NONE 40
CLA CAC CBC SINGLE NONE 41
CLA ND C1D SINGLE NONE 42
CLA ND C4D SINGLE NONE 43
CLA C1D C2D SINGLE NONE 44
CLA C2D C3D DOUBLE NONE 45
CLA C2D CMD SINGLE NONE 46
CLA C3D C4D SINGLE NONE 47
CLA C3D CAD SINGLE NONE 48
CLA CAD OBD DOUBLE NONE 49
CLA CAD CBD SINGLE NONE 50
CLA CBD CGD SINGLE BEGINWEDGE 51
CLA CGD O1D DOUBLE NONE 52
CLA CGD O2D SINGLE NONE 53
CLA O2D CED SINGLE NONE 54
CLA C1 C2 SINGLE ENDUPRIGHT 55
CLA C2 C3 DOUBLE NONE 56
CLA C3 C4 SINGLE ENDDOWNRIGHT 57
CLA C3 C5 SINGLE ENDUPRIGHT 58
CLA C5 C6 SINGLE NONE 59
CLA C6 C7 SINGLE NONE 60
CLA C7 C8 SINGLE NONE 61
CLA C8 C9 SINGLE BEGINWEDGE 62
CLA C8 C10 SINGLE NONE 63
CLA C10 C11 SINGLE NONE 64
CLA C11 C12 SINGLE NONE 65
CLA C12 C13 SINGLE NONE 66
CLA C13 C14 SINGLE BEGINWEDGE 67
CLA C13 C15 SINGLE NONE 68
CLA C15 C16 SINGLE NONE 69
CLA C16 C17 SINGLE NONE 70
CLA C17 C18 SINGLE NONE 71
CLA C18 C19 SINGLE NONE 72
CLA C18 C20 SINGLE NONE 73
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CLA MurckoScaffold S1 scaffold 'O=C1CC2=c3c1cc1n3[Mg@@-2]34n5c(ccc5C=C5CCC2=[N+]53)C=C2C=CC(=[N+]24)C=1' 'InChI=1S/C22H15N4O.Mg/c27-21-11-18-20-6-5-16(25-20)8-14-2-1-12(23-14)7-13-3-4-15(24-13)9-17-10-19(21)22(18)26-17;/h1-4,7-10H,5-6,11H2,(H-,23,24,25,26,27);/q-1;+2/p-1' JQZXFDVZJQFAHW-UHFFFAOYSA-M
CLA porphin-like F1 fragment C1~C~C2~C~C3~C~C~C(~C~C4~C~C~C(~C~C5~C~C~C(~C~C~1~N~2)~N~5)~N~4)~N~3 ? ?
CLA 1-pyrroline F2 fragment C1=NCCC1 InChI=1S/C4H7N/c1-2-4-5-3-1/h3H,1-2,4H2 ZVJHJDDKYZXRJI-UHFFFAOYSA-N
CLA pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CLA MG S1 1
CLA CHA S1 1
CLA CHB S1 1
CLA CHC S1 1
CLA CHD S1 1
CLA NA S1 1
CLA C1A S1 1
CLA C2A S1 1
CLA C3A S1 1
CLA C4A S1 1
CLA NB S1 1
CLA C1B S1 1
CLA C2B S1 1
CLA C3B S1 1
CLA C4B S1 1
CLA NC S1 1
CLA C1C S1 1
CLA C2C S1 1
CLA C3C S1 1
CLA C4C S1 1
CLA ND S1 1
CLA C1D S1 1
CLA C2D S1 1
CLA C3D S1 1
CLA C4D S1 1
CLA CAD S1 1
CLA OBD S1 1
CLA CBD S1 1
CLA C2A F1 1
CLA C3A F1 1
CLA C4A F1 1
CLA CHB F1 1
CLA C1B F1 1
CLA NB F1 1
CLA C4B F1 1
CLA C3B F1 1
CLA C2B F1 1
CLA CHC F1 1
CLA C1C F1 1
CLA NC F1 1
CLA C4C F1 1
CLA CHD F1 1
CLA C1D F1 1
CLA ND F1 1
CLA C4D F1 1
CLA CHA F1 1
CLA C1A F1 1
CLA NA F1 1
CLA C3D F1 1
CLA C2D F1 1
CLA C3C F1 1
CLA C2C F1 1
CLA C4A F2 1
CLA NA F2 1
CLA C1A F2 1
CLA C2A F2 1
CLA C3A F2 1
CLA C1B F3 1
CLA C2B F3 1
CLA C3B F3 1
CLA C4B F3 1
CLA NB F3 1
CLA C1D F3 2
CLA C2D F3 2
CLA C3D F3 2
CLA C4D F3 2
CLA ND F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id CLA
_pdbe_chem_comp_rdkit_properties.exactmw 892.535
_pdbe_chem_comp_rdkit_properties.amw 893.509
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 31
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 65
_pdbe_chem_comp_rdkit_properties.NumAtoms 137
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.545
_pdbe_chem_comp_rdkit_properties.NumRings 9
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 7
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 8
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 6
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 1
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 492.458
_pdbe_chem_comp_rdkit_properties.tpsa 85.550
_pdbe_chem_comp_rdkit_properties.CrippenClogP 11.128
_pdbe_chem_comp_rdkit_properties.CrippenMR 261.361
_pdbe_chem_comp_rdkit_properties.chi0v 33.451
_pdbe_chem_comp_rdkit_properties.chi1v 20.512
_pdbe_chem_comp_rdkit_properties.chi2v 16.844
_pdbe_chem_comp_rdkit_properties.chi3v 16.844
_pdbe_chem_comp_rdkit_properties.chi4v 16.046
_pdbe_chem_comp_rdkit_properties.chi0n 104.037
_pdbe_chem_comp_rdkit_properties.chi1n 53.983
_pdbe_chem_comp_rdkit_properties.chi2n 10.920
_pdbe_chem_comp_rdkit_properties.chi3n 10.920
_pdbe_chem_comp_rdkit_properties.chi4n 8.900
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.284
_pdbe_chem_comp_rdkit_properties.kappa1 10.935
_pdbe_chem_comp_rdkit_properties.kappa2 17.419
_pdbe_chem_comp_rdkit_properties.kappa3 6.826
_pdbe_chem_comp_rdkit_properties.Phi 2.930
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CLA UniChem DrugBank DB02133
CLA UniChem PDBe CLA
CLA UniChem ChEBI 18230
CLA UniChem eMolecules 26750366
CLA UniChem eMolecules 29479434
CLA UniChem fdasrs YF5Q9EJC8Y
CLA UniChem SureChEMBL SCHEMBL38371
CLA UniChem HMDB HMDB0038578
CLA UniChem 'EPA CompTox Dashboard' DTXSID90889346
CLA UniChem BRENDA 119119
CLA UniChem BRENDA 214577
CLA UniChem BRENDA 2647
CLA UniChem ChemicalBook CB5471362
CLA UniChem 'Probes And Drugs' PD126914
CLA UniChem PubChem 16667503
CLA UniChem PubChem 12085802
#