data_CO3
#
_chem_comp.id CO3
_chem_comp.name "CARBONATE ION"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAI
_chem_comp.formula "C O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge -2
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 60.009
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CO3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1LAM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CO3 C C C 0 1 N N N N N N 68.020 55.946 15.793 0.000 0.000 -0.001 C CO3 1
CO3 O1 O1 O 0 1 N N N N N N 69.142 56.162 15.240 -1.302 0.018 0.000 O1 CO3 2
CO3 O2 O2 O -1 1 N N N N N N 66.966 55.576 15.146 0.666 1.118 0.000 O2 CO3 3
CO3 O3 O3 O -1 1 N N N N N N 67.976 56.128 17.054 0.635 -1.136 0.000 O3 CO3 4
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CO3 C O1 DOUB N N 1
CO3 C O2 SING N N 2
CO3 C O3 SING N N 3
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CO3 SMILES ACDLabs 10.04 "[O-]C([O-])=O"
CO3 SMILES_CANONICAL CACTVS 3.341 "[O-]C([O-])=O"
CO3 SMILES CACTVS 3.341 "[O-]C([O-])=O"
CO3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C(=O)([O-])[O-]
CO3 SMILES "OpenEye OEToolkits" 1.5.0 C(=O)([O-])[O-]
CO3 InChI InChI 1.03 InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
CO3 InChIKey InChI 1.03 BVKZGUZCCUSVTD-UHFFFAOYSA-L
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CO3 "SYSTEMATIC NAME" ACDLabs 10.04 carbonate
CO3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 carbonate
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CO3 'Create component' 1999-07-08 RCSB
CO3 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id CO3
_pdbe_chem_comp_drugbank_details.drugbank_id DB14531
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Carbonate ion'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 3812-32-6
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id CO3
_pdbe_chem_comp_synonyms.name Carbonate
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CO3 C C 4.299 0.375 1
CO3 O1 O 5.598 1.125 2
CO3 O2 O 3.000 1.125 3
CO3 O3 O 4.299 -1.125 4
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CO3 C O1 DOUBLE NONE 1
CO3 C O2 SINGLE NONE 2
CO3 C O3 SINGLE NONE 3
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id CO3
_pdbe_chem_comp_rdkit_properties.exactmw 59.986
_pdbe_chem_comp_rdkit_properties.amw 60.008
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 4
_pdbe_chem_comp_rdkit_properties.NumAtoms 4
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 22.489
_pdbe_chem_comp_rdkit_properties.tpsa 63.190
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.447
_pdbe_chem_comp_rdkit_properties.CrippenMR 5.396
_pdbe_chem_comp_rdkit_properties.chi0v 1.725
_pdbe_chem_comp_rdkit_properties.chi1v 0.612
_pdbe_chem_comp_rdkit_properties.chi2v 0
_pdbe_chem_comp_rdkit_properties.chi3v 0
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 1.725
_pdbe_chem_comp_rdkit_properties.chi1n 0.612
_pdbe_chem_comp_rdkit_properties.chi2n 0
_pdbe_chem_comp_rdkit_properties.chi3n 0
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.730
_pdbe_chem_comp_rdkit_properties.kappa1 3.270
_pdbe_chem_comp_rdkit_properties.kappa2 0.711
_pdbe_chem_comp_rdkit_properties.kappa3 0.174
_pdbe_chem_comp_rdkit_properties.Phi 0.581
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CO3 UniChem DrugBank DB14531
CO3 UniChem PDBe CO3
CO3 UniChem ChEBI 41609
CO3 UniChem fdasrs 7UJQ5OPE7D
CO3 UniChem 'PubChem TPHARMA' 15320990
CO3 UniChem ACTor 3812-32-6
CO3 UniChem BindingDb 26987
CO3 UniChem 'EPA CompTox Dashboard' DTXSID70872973
CO3 UniChem MetaboLights MTBLC41609
CO3 UniChem BRENDA 10616
CO3 UniChem BRENDA 2953
CO3 UniChem rxnorm 'CARBONATE ION'
CO3 UniChem 'Probes And Drugs' PD094518
CO3 UniChem Nikkaji J216.002A
CO3 UniChem PubChem 19660
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CO3 C -0.001 0.032 -0.008 ETKDGv3 1
CO3 O1 -0.049 1.251 -0.314 ETKDGv3 2
CO3 O2 1.226 -0.596 0.150 ETKDGv3 3
CO3 O3 -1.176 -0.686 0.172 ETKDGv3 4
#