data_CTP
#
_chem_comp.id CTP
_chem_comp.name "CYTIDINE-5'-TRIPHOSPHATE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H16 N3 O14 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 483.156
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CTP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1COZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CTP N1 N1 N 0 1 N N N N N N 20.107 27.298 -15.711 0.558 0.502 -4.978 N1 CTP 1
CTP C2 C2 C 0 1 N N N N N N 20.400 28.612 -15.921 1.196 -0.671 -4.818 C2 CTP 2
CTP N3 N3 N 0 1 N N N N N N 19.652 29.419 -16.652 2.313 -0.944 -5.492 N3 CTP 3
CTP C4 C4 C 0 1 N N N N N N 18.536 28.956 -17.236 2.825 -0.061 -6.340 C4 CTP 4
CTP C5 C5 C 0 1 N N N N N N 18.168 27.630 -17.087 2.184 1.180 -6.526 C5 CTP 5
CTP C6 C6 C 0 1 N N N N N N 18.991 26.834 -16.312 1.046 1.440 -5.838 C6 CTP 6
CTP O2 O2 O 0 1 N N N N N N 21.413 29.148 -15.430 0.745 -1.498 -4.044 O2 CTP 7
CTP N4 N4 N 0 1 N N N N N N 17.815 29.821 -17.955 3.979 -0.354 -7.029 N4 CTP 8
CTP "C1'" C1* C 0 1 N N R N N N 20.951 26.458 -14.809 -0.667 0.774 -4.224 "C1'" CTP 9
CTP "C2'" C2* C 0 1 N N R N N N 20.230 26.218 -13.493 -1.737 -0.296 -4.533 "C2'" CTP 10
CTP "O2'" O2* O 0 1 N N N N N N 20.486 27.319 -12.637 -2.665 0.181 -5.509 "O2'" CTP 11
CTP "C3'" C3* C 0 1 N N S N N N 20.811 24.924 -13.001 -2.445 -0.520 -3.176 "C3'" CTP 12
CTP "C4'" C4* C 0 1 N N R N N N 21.374 24.253 -14.250 -1.721 0.444 -2.211 "C4'" CTP 13
CTP "O4'" O4* O 0 1 N N N N N N 21.143 25.152 -15.338 -0.421 0.654 -2.805 "O4'" CTP 14
CTP "O3'" O3* O 0 1 N N N N N N 21.938 25.098 -12.135 -3.831 -0.184 -3.272 "O3'" CTP 15
CTP "C5'" C5* C 0 1 N N N N N N 20.602 22.972 -14.404 -1.576 -0.192 -0.827 "C5'" CTP 16
CTP "O5'" O5* O 0 1 N N N N N N 19.850 23.024 -15.587 -0.841 0.686 0.026 "O5'" CTP 17
CTP PA PA P 0 1 N N S N N N 18.245 22.678 -15.700 -0.727 -0.042 1.457 PA CTP 18
CTP O1A O1A O 0 1 N N N N N N 17.617 22.840 -14.289 -0.021 -1.333 1.298 O1A CTP 19
CTP O2A O2A O 0 1 N N N N N N 18.200 21.196 -16.124 -2.203 -0.307 2.043 O2A CTP 20
CTP O3A O3A O 0 1 N N N N N N 17.590 23.724 -16.820 0.093 0.896 2.475 O3A CTP 21
CTP PB PB P 0 1 N N R N N N 16.067 24.321 -16.587 0.168 0.109 3.877 PB CTP 22
CTP O1B O1B O 0 1 N N N N N N 15.747 25.193 -17.853 0.860 -1.183 3.681 O1B CTP 23
CTP O2B O2B O 0 1 N N N N N N 16.022 25.196 -15.292 -1.323 -0.157 4.423 O2B CTP 24
CTP O3B O3B O 0 1 N N N N N N 14.953 23.081 -16.573 0.980 0.996 4.948 O3B CTP 25
CTP PG PG P 0 1 N N N N N N 13.491 23.267 -15.820 1.016 0.153 6.319 PG CTP 26
CTP O1G O1G O 0 1 N N N N N N 13.785 23.498 -14.293 1.695 -1.140 6.085 O1G CTP 27
CTP O2G O2G O 0 1 N N N N N N 12.717 21.918 -16.047 1.817 0.986 7.440 O2G CTP 28
CTP O3G O3G O 0 1 N N N N N N 12.752 24.515 -16.422 -0.489 -0.113 6.824 O3G CTP 29
CTP H5 H5 H 0 1 N N N N N N 17.259 27.225 -17.564 2.588 1.908 -7.212 H5 CTP 30
CTP H6 H6 H 0 1 N N N N N N 18.743 25.769 -16.165 0.534 2.382 -5.967 H6 CTP 31
CTP HN41 1HN4 H 0 0 N N N N N N 16.966 29.469 -18.398 4.420 -1.207 -6.896 HN41 CTP 32
CTP HN42 2HN4 H 0 0 N N N N N N 18.411 30.253 -18.660 4.349 0.291 -7.651 HN42 CTP 33
CTP "H1'" H1* H 0 1 N N N N N N 21.915 27.005 -14.692 -1.045 1.768 -4.461 "H1'" CTP 34
CTP "H2'" H2* H 0 1 N N N N N N 19.119 26.140 -13.562 -1.265 -1.217 -4.874 "H2'" CTP 35
CTP "HO2'" *HO2 H 0 0 N N N N N N 20.035 27.169 -11.814 -3.339 -0.504 -5.613 "HO2'" CTP 36
CTP "H3'" H3* H 0 1 N N N N N N 20.021 24.366 -12.445 -2.325 -1.552 -2.847 "H3'" CTP 37
CTP "H4'" H4* H 0 1 N N N N N N 22.464 24.026 -14.203 -2.262 1.387 -2.139 "H4'" CTP 38
CTP "HO3'" *HO3 H 0 0 N N N N N N 22.305 24.279 -11.823 -4.229 -0.817 -3.885 "HO3'" CTP 39
CTP "H5'1" 1H5* H 0 0 N N N N N N 21.260 22.073 -14.361 -2.565 -0.368 -0.403 "H5'1" CTP 40
CTP "H5'2" 2H5* H 0 0 N N N N N N 19.971 22.748 -13.511 -1.045 -1.140 -0.917 "H5'2" CTP 41
CTP HOA2 2HOA H 0 0 N N N N N N 17.273 20.996 -16.189 -2.628 0.557 2.131 HOA2 CTP 42
CTP HOB2 2HOB H 0 0 N N N N N N 15.146 25.539 -15.158 -1.738 0.708 4.537 HOB2 CTP 43
CTP HOG2 2HOG H 0 0 N N N N N N 11.877 22.024 -15.614 1.815 0.447 8.243 HOG2 CTP 44
CTP HOG3 3HOG H 0 0 N N N N N N 11.912 24.621 -15.989 -0.895 0.752 6.964 HOG3 CTP 45
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CTP N1 C2 SING N N 1
CTP N1 C6 SING N N 2
CTP N1 "C1'" SING N N 3
CTP C2 N3 SING N N 4
CTP C2 O2 DOUB N N 5
CTP N3 C4 DOUB N N 6
CTP C4 C5 SING N N 7
CTP C4 N4 SING N N 8
CTP C5 C6 DOUB N N 9
CTP C5 H5 SING N N 10
CTP C6 H6 SING N N 11
CTP N4 HN41 SING N N 12
CTP N4 HN42 SING N N 13
CTP "C1'" "C2'" SING N N 14
CTP "C1'" "O4'" SING N N 15
CTP "C1'" "H1'" SING N N 16
CTP "C2'" "O2'" SING N N 17
CTP "C2'" "C3'" SING N N 18
CTP "C2'" "H2'" SING N N 19
CTP "O2'" "HO2'" SING N N 20
CTP "C3'" "C4'" SING N N 21
CTP "C3'" "O3'" SING N N 22
CTP "C3'" "H3'" SING N N 23
CTP "C4'" "O4'" SING N N 24
CTP "C4'" "C5'" SING N N 25
CTP "C4'" "H4'" SING N N 26
CTP "O3'" "HO3'" SING N N 27
CTP "C5'" "O5'" SING N N 28
CTP "C5'" "H5'1" SING N N 29
CTP "C5'" "H5'2" SING N N 30
CTP "O5'" PA SING N N 31
CTP PA O1A DOUB N N 32
CTP PA O2A SING N N 33
CTP PA O3A SING N N 34
CTP O2A HOA2 SING N N 35
CTP O3A PB SING N N 36
CTP PB O1B DOUB N N 37
CTP PB O2B SING N N 38
CTP PB O3B SING N N 39
CTP O2B HOB2 SING N N 40
CTP O3B PG SING N N 41
CTP PG O1G DOUB N N 42
CTP PG O2G SING N N 43
CTP PG O3G SING N N 44
CTP O2G HOG2 SING N N 45
CTP O3G HOG3 SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CTP SMILES ACDLabs 10.04 O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC2OC(N1C(=O)N=C(N)C=C1)C(O)C2O
CTP SMILES_CANONICAL CACTVS 3.341 NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O
CTP SMILES CACTVS 3.341 NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]2O
CTP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O
CTP SMILES "OpenEye OEToolkits" 1.5.0 C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
CTP InChI InChI 1.03 InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
CTP InChIKey InChI 1.03 PCDQPRRSZKQHHS-XVFCMESISA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CTP "SYSTEMATIC NAME" ACDLabs 10.04 "cytidine 5'-(tetrahydrogen triphosphate)"
CTP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl (hydroxy-phosphonooxy-phosphoryl) hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CTP 'Create component' 1999-07-08 RCSB
CTP 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id CTP
_pdbe_chem_comp_drugbank_details.drugbank_id DB02431
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "Cytidine-5'-Triphosphate"
_pdbe_chem_comp_drugbank_details.description
'Cytidine 5'-(tetrahydrogen triphosphate). A cytosine nucleotide containing three phosphate groups esterified to the sugar moiety. [PubChem]'
_pdbe_chem_comp_drugbank_details.cas_number 65-47-4
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id CTP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02431
_pdbe_chem_comp_drugbank_classification.parent 'Pentose phosphates'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as pentose phosphates. These are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
CTP DB02431 '3-deoxy-manno-octulosonate cytidylyltransferase' 'Escherichia coli' P42216 unknown 1
CTP DB02431 'Uridine-cytidine kinase 2' Humans Q9BZX2 unknown 2
CTP DB02431 '2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase' 'Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)' Q9X1B3 unknown 3
CTP DB02431 'Glycerol-3-phosphate cytidylyltransferase' 'Bacillus subtilis (strain 168)' P27623 unknown 4
CTP DB02431 '2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase' 'Escherichia coli (strain K12)' Q46893 unknown 5
CTP DB02431 'Coenzyme A biosynthesis bifunctional protein CoaBC' 'Escherichia coli (strain K12)' P0ABQ0 unknown 6
CTP DB02431 'CCA-adding enzyme' 'Geobacillus stearothermophilus' Q7SIB1 unknown 7
CTP DB02431 'Glucose-1-phosphate cytidylyltransferase' 'Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)' P26396 unknown 8
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CTP N1 N 6.331 2.220 1
CTP C2 C 7.630 2.970 2
CTP N3 N 7.630 4.470 3
CTP C4 C 6.331 5.220 4
CTP C5 C 5.032 4.470 5
CTP C6 C 5.032 2.970 6
CTP O2 O 8.929 2.220 7
CTP N4 N 6.331 6.720 8
CTP "C1'" C 6.331 0.720 9
CTP "C2'" C 5.118 -0.161 10
CTP "O2'" O 3.691 0.302 11
CTP "C3'" C 5.581 -1.588 12
CTP "C4'" C 7.081 -1.588 13
CTP "O4'" O 7.545 -0.161 14
CTP "O3'" O 4.699 -2.801 15
CTP "C5'" C 7.963 -2.801 16
CTP "O5'" O 9.455 -2.645 17
CTP PA P 10.336 -3.858 18
CTP O1A O 11.550 -2.977 19
CTP O2A O 9.123 -4.740 20
CTP O3A O 11.218 -5.072 21
CTP PB P 12.710 -4.915 22
CTP O1B O 12.867 -6.407 23
CTP O2B O 12.553 -3.423 24
CTP O3B O 14.202 -4.758 25
CTP PG P 15.083 -5.972 26
CTP O1G O 15.965 -7.185 27
CTP O2G O 16.297 -5.090 28
CTP O3G O 13.870 -6.853 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CTP N1 C2 SINGLE NONE 1
CTP N1 C6 SINGLE NONE 2
CTP "C1'" N1 SINGLE BEGINDASH 3
CTP C2 N3 SINGLE NONE 4
CTP C2 O2 DOUBLE NONE 5
CTP N3 C4 DOUBLE NONE 6
CTP C4 C5 SINGLE NONE 7
CTP C4 N4 SINGLE NONE 8
CTP C5 C6 DOUBLE NONE 9
CTP "C1'" "C2'" SINGLE NONE 10
CTP "C1'" "O4'" SINGLE NONE 11
CTP "C2'" "O2'" SINGLE BEGINWEDGE 12
CTP "C2'" "C3'" SINGLE NONE 13
CTP "C3'" "C4'" SINGLE NONE 14
CTP "C3'" "O3'" SINGLE BEGINWEDGE 15
CTP "C4'" "O4'" SINGLE NONE 16
CTP "C4'" "C5'" SINGLE BEGINDASH 17
CTP "C5'" "O5'" SINGLE NONE 18
CTP "O5'" PA SINGLE NONE 19
CTP PA O1A DOUBLE NONE 20
CTP PA O2A SINGLE BEGINDASH 21
CTP PA O3A SINGLE NONE 22
CTP O3A PB SINGLE NONE 23
CTP PB O1B DOUBLE NONE 24
CTP PB O2B SINGLE BEGINWEDGE 25
CTP PB O3B SINGLE NONE 26
CTP O3B PG SINGLE NONE 27
CTP PG O1G DOUBLE NONE 28
CTP PG O2G SINGLE NONE 29
CTP PG O3G SINGLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CTP MurckoScaffold S1 scaffold 'O=c1ncccn1[C@H]1CCCO1' InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1 AKXKPKRAUWTVBW-SSDOTTSWSA-N
CTP phosphate F1 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
CTP pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
CTP ribose F3 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CTP N1 S1 1
CTP C2 S1 1
CTP N3 S1 1
CTP C4 S1 1
CTP C5 S1 1
CTP C6 S1 1
CTP O2 S1 1
CTP "C1'" S1 1
CTP "C2'" S1 1
CTP "C3'" S1 1
CTP "C4'" S1 1
CTP "O4'" S1 1
CTP "O5'" F1 1
CTP PA F1 1
CTP O1A F1 1
CTP O2A F1 1
CTP O3A F1 1
CTP O3A F1 2
CTP PB F1 2
CTP O1B F1 2
CTP O2B F1 2
CTP O3B F1 2
CTP O3B F1 3
CTP PG F1 3
CTP O1G F1 3
CTP O2G F1 3
CTP O3G F1 3
CTP C5 F2 1
CTP C4 F2 1
CTP N3 F2 1
CTP C2 F2 1
CTP N1 F2 1
CTP C6 F2 1
CTP "C2'" F3 1
CTP "C3'" F3 1
CTP "C4'" F3 1
CTP "O4'" F3 1
CTP "C1'" F3 1
CTP "C5'" F3 1
CTP "O5'" F3 1
CTP "O3'" F3 1
CTP "O2'" F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id CTP
_pdbe_chem_comp_rdkit_properties.exactmw 482.985
_pdbe_chem_comp_rdkit_properties.amw 483.156
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 15
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 17
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 45
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 20
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.556
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 183.385
_pdbe_chem_comp_rdkit_properties.tpsa 270.420
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.693
_pdbe_chem_comp_rdkit_properties.CrippenMR 87.934
_pdbe_chem_comp_rdkit_properties.chi0v 15.582
_pdbe_chem_comp_rdkit_properties.chi1v 10.639
_pdbe_chem_comp_rdkit_properties.chi2v 5.846
_pdbe_chem_comp_rdkit_properties.chi3v 5.846
_pdbe_chem_comp_rdkit_properties.chi4v 4.113
_pdbe_chem_comp_rdkit_properties.chi0n 28.899
_pdbe_chem_comp_rdkit_properties.chi1n 13.601
_pdbe_chem_comp_rdkit_properties.chi2n 2.331
_pdbe_chem_comp_rdkit_properties.chi3n 2.331
_pdbe_chem_comp_rdkit_properties.chi4n 1.438
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.030
_pdbe_chem_comp_rdkit_properties.kappa1 10.060
_pdbe_chem_comp_rdkit_properties.kappa2 8.607
_pdbe_chem_comp_rdkit_properties.kappa3 6.734
_pdbe_chem_comp_rdkit_properties.Phi 2.986
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CTP UniChem ChEMBL CHEMBL223533
CTP UniChem DrugBank DB02431
CTP UniChem PDBe CTP
CTP UniChem 'Guide to Pharmacology' 1741
CTP UniChem 'KEGG LIGAND' C00063
CTP UniChem ChEBI 17677
CTP UniChem ZINC ZINC000003861746
CTP UniChem eMolecules 30152009
CTP UniChem fdasrs K0118UX80T
CTP UniChem HMDB HMDB0000082
CTP UniChem 'PubChem TPHARMA' 14859169
CTP UniChem NMRShiftDB 60020633
CTP UniChem BindingDb 50454133
CTP UniChem MetaboLights MTBLC17677
CTP UniChem BRENDA 118756
CTP UniChem BRENDA 127865
CTP UniChem BRENDA 60
CTP UniChem BRENDA 91797
CTP UniChem ChemicalBook CB4120553
CTP UniChem ChemicalBook CB6344397
CTP UniChem 'Probes And Drugs' PD047754
CTP UniChem 'EPA CompTox Dashboard' DTXSID70889324
CTP UniChem SureChEMBL SCHEMBL104629
CTP UniChem 'PubChem TPHARMA' 135655796
CTP UniChem PubChem 6176
CTP UniChem Nikkaji J213.552C
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CTP N1 -3.696 0.253 0.319 ETKDGv3 1
CTP C2 -3.286 0.176 -1.061 ETKDGv3 2
CTP N3 -4.242 0.439 -2.091 ETKDGv3 3
CTP C4 -5.481 0.721 -1.810 ETKDGv3 4
CTP C5 -5.938 0.770 -0.404 ETKDGv3 5
CTP C6 -5.079 0.540 0.594 ETKDGv3 6
CTP O2 -2.104 -0.126 -1.372 ETKDGv3 7
CTP N4 -6.404 0.977 -2.867 ETKDGv3 8
CTP "C1'" -2.778 -0.042 1.430 ETKDGv3 9
CTP "C2'" -2.507 -1.552 1.532 ETKDGv3 10
CTP "O2'" -2.997 -2.058 2.749 ETKDGv3 11
CTP "C3'" -0.994 -1.647 1.470 ETKDGv3 12
CTP "C4'" -0.553 -0.215 1.739 ETKDGv3 13
CTP "O4'" -1.556 0.639 1.246 ETKDGv3 14
CTP "O3'" -0.466 -2.520 2.435 ETKDGv3 15
CTP "C5'" 0.796 0.120 1.094 ETKDGv3 16
CTP "O5'" 0.682 0.075 -0.310 ETKDGv3 17
CTP PA 2.214 0.402 -0.981 ETKDGv3 18
CTP O1A 2.082 0.397 -2.488 ETKDGv3 19
CTP O2A 3.298 -0.814 -0.513 ETKDGv3 20
CTP O3A 2.735 1.938 -0.462 ETKDGv3 21
CTP PB 4.391 2.074 -0.831 ETKDGv3 22
CTP O1B 4.811 3.505 -0.580 ETKDGv3 23
CTP O2B 4.658 1.700 -2.464 ETKDGv3 24
CTP O3B 5.275 1.045 0.200 ETKDGv3 25
CTP PG 6.851 0.907 -0.427 ETKDGv3 26
CTP O1G 6.835 0.054 -1.675 ETKDGv3 27
CTP O2G 7.827 0.158 0.734 ETKDGv3 28
CTP O3G 7.501 2.430 -0.788 ETKDGv3 29
CTP H5 -6.974 0.989 -0.180 ETKDGv3 30
CTP H6 -5.438 0.574 1.616 ETKDGv3 31
CTP HN41 -6.091 0.942 -3.863 ETKDGv3 32
CTP HN42 -7.402 1.202 -2.660 ETKDGv3 33
CTP "H1'" -3.218 0.327 2.385 ETKDGv3 34
CTP "H2'" -2.950 -2.119 0.679 ETKDGv3 35
CTP "HO2'" -3.983 -2.120 2.649 ETKDGv3 36
CTP "H3'" -0.684 -1.965 0.446 ETKDGv3 37
CTP "H4'" -0.461 -0.053 2.839 ETKDGv3 38
CTP "HO3'" -0.643 -3.440 2.107 ETKDGv3 39
CTP "H5'1" 1.551 -0.612 1.462 ETKDGv3 40
CTP "H5'2" 1.088 1.142 1.426 ETKDGv3 41
CTP HOA2 2.865 -1.660 -0.792 ETKDGv3 42
CTP HOB2 4.146 2.382 -2.967 ETKDGv3 43
CTP HOG2 8.738 0.169 0.345 ETKDGv3 44
CTP HOG3 7.581 2.883 0.089 ETKDGv3 45
#