data_CU9
#
_chem_comp.id CU9
_chem_comp.name "6,6',7',12'-tetramethoxy-2,2,2',2'-tetramethyltubocuraran-2,2'-diium"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C40 H48 N2 O6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms metocurine
_chem_comp.pdbx_formal_charge 2
_chem_comp.pdbx_initial_date 2010-10-29
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 652.819
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CU9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3PEO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CU9 N1 N1 N 1 1 N N N N N N -40.881 -42.053 10.596 -5.297 3.021 -0.656 N1 CU9 1
CU9 C2 C2 C 0 1 N N N N N N -41.858 -42.764 11.465 -5.982 2.815 0.621 C2 CU9 2
CU9 C3 C3 C 0 1 N N N N N N -42.645 -41.961 12.497 -6.203 1.341 0.914 C3 CU9 3
CU9 C4 C4 C 0 1 Y N N N N N -42.505 -40.468 12.324 -5.097 0.463 0.396 C4 CU9 4
CU9 C5 C5 C 0 1 Y N N N N N -41.873 -39.884 11.217 -4.037 0.970 -0.329 C5 CU9 5
CU9 C6 C6 C 0 1 N N S N N N -41.309 -40.717 10.099 -3.946 2.451 -0.596 C6 CU9 6
CU9 C7 C7 C 0 1 Y N N N N N -43.026 -39.692 13.351 -5.151 -0.897 0.658 C7 CU9 7
CU9 C8 C8 C 0 1 Y N N N N N -42.955 -38.303 13.292 -4.170 -1.742 0.180 C8 CU9 8
CU9 C9 C9 C 0 1 Y N N N N N -42.349 -37.719 12.200 -3.109 -1.238 -0.586 C9 CU9 9
CU9 C10 C10 C 0 1 Y N N N N N -41.794 -38.471 11.169 -3.053 0.128 -0.827 C10 CU9 10
CU9 O11 O11 O 0 1 N N N N N N -42.287 -36.364 12.232 -2.222 -2.090 -1.069 O11 CU9 11
CU9 C12 C12 C 0 1 Y N N N N N -41.699 -35.555 11.292 -1.013 -2.570 -0.813 C12 CU9 12
CU9 C13 C13 C 0 1 Y N N N N N -40.480 -35.056 11.669 -0.929 -3.899 -0.360 C13 CU9 13
CU9 C14 C14 C 0 1 Y N N N N N -39.757 -34.205 10.831 0.300 -4.465 -0.097 C14 CU9 14
CU9 C15 C15 C 0 1 Y N N N N N -40.309 -33.901 9.593 1.457 -3.731 -0.303 C15 CU9 15
CU9 C16 C16 C 0 1 Y N N N N N -41.576 -34.411 9.207 1.390 -2.429 -0.747 C16 CU9 16
CU9 C17 C17 C 0 1 Y N N N N N -42.289 -35.262 10.056 0.156 -1.844 -0.973 C17 CU9 17
CU9 C18 C18 C 0 1 N N N N N N -42.137 -34.061 7.862 2.628 -1.628 -1.036 C18 CU9 18
CU9 C19 C19 C 0 1 N N R N N N -43.530 -33.412 7.796 3.540 -1.411 0.165 C19 CU9 19
CU9 N20 N20 N 1 1 N N N N N N -43.436 -31.915 7.710 4.595 -2.370 0.330 N20 CU9 20
CU9 C21 C21 C 0 1 N N N N N N -42.824 -31.492 6.410 5.936 -1.839 0.589 C21 CU9 21
CU9 C22 C22 C 0 1 N N N N N N -43.623 -31.898 5.159 6.315 -0.820 -0.496 C22 CU9 22
CU9 C23 C23 C 0 1 Y N N N N N -44.235 -33.292 5.344 5.339 0.323 -0.302 C23 CU9 23
CU9 C24 C24 C 0 1 Y N N N N N -44.220 -33.984 6.588 4.045 0.009 0.031 C24 CU9 24
CU9 C25 C25 C 0 1 Y N N N N N -44.906 -33.852 4.271 5.751 1.627 -0.458 C25 CU9 25
CU9 C26 C26 C 0 1 Y N N N N N -45.519 -35.107 4.356 4.857 2.667 -0.238 C26 CU9 26
CU9 C27 C27 C 0 1 Y N N N N N -45.495 -35.788 5.555 3.553 2.370 0.147 C27 CU9 27
CU9 C28 C28 C 0 1 Y N N N N N -44.865 -35.236 6.671 3.145 1.058 0.285 C28 CU9 28
CU9 O29 O29 O 0 1 N N N N N N -44.864 -35.942 7.867 1.919 0.711 0.665 O29 CU9 29
CU9 C30 C30 C 0 1 Y N N N N N -44.261 -37.137 8.100 0.734 1.305 0.574 C30 CU9 30
CU9 C31 C31 C 0 1 Y N N N N N -44.839 -38.011 9.026 -0.016 1.431 1.746 C31 CU9 31
CU9 C32 C32 C 0 1 Y N N N N N -44.205 -39.235 9.275 -1.253 2.033 1.719 C32 CU9 32
CU9 C33 C33 C 0 1 Y N N N N N -43.023 -39.569 8.639 -1.749 2.512 0.526 C33 CU9 33
CU9 C34 C34 C 0 1 Y N N N N N -42.441 -38.674 7.719 -1.012 2.405 -0.640 C34 CU9 34
CU9 C35 C35 C 0 1 Y N N N N N -43.073 -37.470 7.424 0.227 1.794 -0.619 C35 CU9 35
CU9 C36 C36 C 0 1 N N N N N N -42.311 -40.882 8.909 -3.114 3.151 0.474 C36 CU9 36
CU9 O37 O37 O 0 1 N N N N N N -43.458 -37.490 14.318 -4.236 -3.073 0.451 O37 CU9 37
CU9 C38 C38 C 0 1 N N N N N N -44.148 -38.055 15.469 -5.345 -3.522 1.234 C38 CU9 38
CU9 O39 O39 O 0 1 N N N N N N -40.114 -35.439 12.924 -2.062 -4.632 -0.186 O39 CU9 39
CU9 O40 O40 O 0 1 N N N N N N -46.187 -35.717 3.287 5.249 3.960 -0.389 O40 CU9 40
CU9 C41 C41 C 0 1 N N N N N N -46.287 -35.115 1.970 6.605 4.185 -0.779 C41 CU9 41
CU9 O42 O42 O 0 1 N N N N N N -46.119 -37.028 5.560 2.681 3.383 0.405 O42 CU9 42
CU9 C43 C43 C 0 1 N N N N N N -39.659 -41.977 11.396 -6.054 2.383 -1.746 C43 CU9 43
CU9 C44 C44 C 0 1 N N N N N N -44.784 -31.376 8.023 4.256 -3.172 1.539 C44 CU9 44
CU9 C45 C45 C 0 1 N N N N N N -42.625 -31.342 8.791 4.717 -3.319 -0.780 C45 CU9 45
CU9 C46 C46 C 0 1 N N N N N N -47.178 -37.404 6.434 2.716 3.951 1.716 C46 CU9 46
CU9 C47 C47 C 0 1 N N N N N N -40.585 -42.928 9.433 -5.227 4.463 -0.949 C47 CU9 47
CU9 C48 C48 C 0 1 N N N N N N -38.784 -35.323 13.430 -1.903 -5.975 0.276 C48 CU9 48
CU9 H2 H2 H 0 1 N N N N N N -42.600 -43.219 10.792 -5.407 3.273 1.429 H2 CU9 49
CU9 H2A H2A H 0 1 N N N N N N -41.286 -43.517 12.026 -6.954 3.323 0.583 H2A CU9 50
CU9 H3 H3 H 0 1 N N N N N N -43.709 -42.221 12.396 -6.277 1.208 1.999 H3 CU9 51
CU9 H3A H3A H 0 1 N N N N N N -42.273 -42.228 13.497 -7.147 1.016 0.468 H3A CU9 52
CU9 H6 H6 H 0 1 N N N N N N -40.431 -40.175 9.717 -3.474 2.591 -1.572 H6 CU9 53
CU9 H7 H7 H 0 1 N N N N N N -43.490 -40.170 14.202 -5.971 -1.296 1.235 H7 CU9 54
CU9 H10 H10 H 0 1 N N N N N N -41.307 -37.981 10.339 -2.241 0.531 -1.412 H10 CU9 55
CU9 H14 H14 H 0 1 N N N N N N -38.804 -33.798 11.134 0.364 -5.479 0.270 H14 CU9 56
CU9 H15 H15 H 0 1 N N N N N N -39.764 -33.265 8.912 2.404 -4.211 -0.117 H15 CU9 57
CU9 H17 H17 H 0 1 N N N N N N -43.247 -35.673 9.773 0.103 -0.807 -1.266 H17 CU9 58
CU9 H18 H18 H 0 1 N N N N N N -41.436 -33.347 7.405 3.119 -1.987 -1.923 H18 CU9 59
CU9 H18A H18A H 0 0 N N N N N N -42.201 -35.001 7.294 2.262 -0.616 -1.336 H18A CU9 60
CU9 H19 H19 H 0 1 N N N N N N -44.100 -33.629 8.711 2.909 -1.414 1.074 H19 CU9 61
CU9 H21 H21 H 0 1 N N N N N N -42.747 -30.395 6.417 5.957 -1.360 1.569 H21 CU9 62
CU9 H21A H21A H 0 0 N N N N N N -41.831 -31.959 6.339 6.651 -2.665 0.583 H21A CU9 63
CU9 H22 H22 H 0 1 N N N N N N -44.430 -31.169 4.994 7.334 -0.468 -0.323 H22 CU9 64
CU9 H22A H22A H 0 0 N N N N N N -42.950 -31.912 4.289 6.216 -1.232 -1.493 H22A CU9 65
CU9 H25 H25 H 0 1 N N N N N N -44.958 -33.305 3.341 6.769 1.843 -0.751 H25 CU9 66
CU9 H31 H31 H 0 1 N N N N N N -45.753 -37.748 9.537 0.377 1.051 2.678 H31 CU9 67
CU9 H32 H32 H 0 1 N N N N N N -44.646 -39.929 9.975 -1.827 2.127 2.627 H32 CU9 68
CU9 H34 H34 H 0 1 N N N N N N -41.504 -38.923 7.243 -1.405 2.803 -1.566 H34 CU9 69
CU9 H35 H35 H 0 1 N N N N N N -42.657 -36.800 6.686 0.802 1.694 -1.532 H35 CU9 70
CU9 H36 H36 H 0 1 N N N N N N -41.757 -41.186 8.008 -2.984 4.205 0.232 H36 CU9 71
CU9 H36A H36A H 0 0 N N N N N N -43.054 -41.652 9.165 -3.590 3.047 1.445 H36A CU9 72
CU9 H38 H38 H 0 1 N N N N N N -44.457 -37.245 16.146 -5.276 -4.600 1.376 H38 CU9 73
CU9 H38A H38A H 0 0 N N N N N N -45.037 -38.607 15.129 -5.329 -3.026 2.204 H38A CU9 74
CU9 H38B H38B H 0 0 N N N N N N -43.472 -38.740 16.002 -6.274 -3.282 0.718 H38B CU9 75
CU9 H41 H41 H 0 1 N N N N N N -46.856 -35.781 1.304 6.786 5.256 -0.864 H41 CU9 76
CU9 H41A H41A H 0 0 N N N N N N -46.803 -34.147 2.048 7.274 3.762 -0.030 H41A CU9 77
CU9 H41B H41B H 0 0 N N N N N N -45.278 -34.961 1.560 6.790 3.708 -1.742 H41B CU9 78
CU9 H43 H43 H 0 1 N N N N N N -38.876 -41.460 10.822 -7.050 2.821 -1.801 H43 CU9 79
CU9 H43A H43A H 0 0 N N N N N N -39.862 -41.421 12.323 -5.534 2.543 -2.691 H43A CU9 80
CU9 H43B H43B H 0 0 N N N N N N -39.320 -42.993 11.645 -6.137 1.314 -1.554 H43B CU9 81
CU9 H44 H44 H 0 1 N N N N N N -44.761 -30.277 7.971 3.299 -3.670 1.388 H44 CU9 82
CU9 H44A H44A H 0 0 N N N N N N -45.511 -31.762 7.294 5.032 -3.919 1.708 H44A CU9 83
CU9 H44B H44B H 0 0 N N N N N N -45.078 -31.689 9.036 4.191 -2.513 2.405 H44B CU9 84
CU9 H45 H45 H 0 1 N N N N N N -42.588 -30.248 8.682 5.035 -2.789 -1.678 H45 CU9 85
CU9 H45A H45A H 0 0 N N N N N N -43.074 -31.599 9.762 5.455 -4.080 -0.527 H45A CU9 86
CU9 H45B H45B H 0 0 N N N N N N -41.605 -31.750 8.739 3.752 -3.793 -0.960 H45B CU9 87
CU9 H46 H46 H 0 1 N N N N N N -47.481 -38.439 6.219 1.919 4.689 1.813 H46 CU9 88
CU9 H46A H46A H 0 0 N N N N N N -46.836 -37.331 7.477 2.575 3.164 2.457 H46A CU9 89
CU9 H46B H46B H 0 0 N N N N N N -48.035 -36.732 6.281 3.679 4.434 1.877 H46B CU9 90
CU9 H47 H47 H 0 1 N N N N N N -39.863 -42.427 8.771 -4.677 4.969 -0.155 H47 CU9 91
CU9 H47A H47A H 0 0 N N N N N N -40.159 -43.878 9.788 -4.716 4.617 -1.899 H47A CU9 92
CU9 H47B H47B H 0 0 N N N N N N -41.514 -43.127 8.879 -6.236 4.871 -1.008 H47B CU9 93
CU9 H48 H48 H 0 1 N N N N N N -38.750 -35.699 14.463 -1.298 -6.535 -0.437 H48 CU9 94
CU9 H48A H48A H 0 0 N N N N N N -38.100 -35.913 12.802 -1.407 -5.968 1.247 H48A CU9 95
CU9 H48B H48B H 0 0 N N N N N N -38.477 -34.267 13.414 -2.881 -6.445 0.371 H48B CU9 96
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CU9 N1 C2 SING N N 1
CU9 N1 C6 SING N N 2
CU9 N1 C43 SING N N 3
CU9 N1 C47 SING N N 4
CU9 C2 C3 SING N N 5
CU9 C3 C4 SING N N 6
CU9 C4 C5 DOUB Y N 7
CU9 C4 C7 SING Y N 8
CU9 C5 C6 SING N N 9
CU9 C5 C10 SING Y N 10
CU9 C6 C36 SING N N 11
CU9 C7 C8 DOUB Y N 12
CU9 C8 C9 SING Y N 13
CU9 C8 O37 SING N N 14
CU9 C9 C10 DOUB Y N 15
CU9 C9 O11 SING N N 16
CU9 O11 C12 SING N N 17
CU9 C12 C13 DOUB Y N 18
CU9 C12 C17 SING Y N 19
CU9 C13 C14 SING Y N 20
CU9 C13 O39 SING N N 21
CU9 C14 C15 DOUB Y N 22
CU9 C15 C16 SING Y N 23
CU9 C16 C17 DOUB Y N 24
CU9 C16 C18 SING N N 25
CU9 C18 C19 SING N N 26
CU9 C19 N20 SING N N 27
CU9 C19 C24 SING N N 28
CU9 N20 C21 SING N N 29
CU9 N20 C44 SING N N 30
CU9 N20 C45 SING N N 31
CU9 C21 C22 SING N N 32
CU9 C22 C23 SING N N 33
CU9 C23 C24 DOUB Y N 34
CU9 C23 C25 SING Y N 35
CU9 C24 C28 SING Y N 36
CU9 C25 C26 DOUB Y N 37
CU9 C26 C27 SING Y N 38
CU9 C26 O40 SING N N 39
CU9 C27 C28 DOUB Y N 40
CU9 C27 O42 SING N N 41
CU9 C28 O29 SING N N 42
CU9 O29 C30 SING N N 43
CU9 C30 C31 DOUB Y N 44
CU9 C30 C35 SING Y N 45
CU9 C31 C32 SING Y N 46
CU9 C32 C33 DOUB Y N 47
CU9 C33 C34 SING Y N 48
CU9 C33 C36 SING N N 49
CU9 C34 C35 DOUB Y N 50
CU9 O37 C38 SING N N 51
CU9 O39 C48 SING N N 52
CU9 O40 C41 SING N N 53
CU9 O42 C46 SING N N 54
CU9 C2 H2 SING N N 55
CU9 C2 H2A SING N N 56
CU9 C3 H3 SING N N 57
CU9 C3 H3A SING N N 58
CU9 C6 H6 SING N N 59
CU9 C7 H7 SING N N 60
CU9 C10 H10 SING N N 61
CU9 C14 H14 SING N N 62
CU9 C15 H15 SING N N 63
CU9 C17 H17 SING N N 64
CU9 C18 H18 SING N N 65
CU9 C18 H18A SING N N 66
CU9 C19 H19 SING N N 67
CU9 C21 H21 SING N N 68
CU9 C21 H21A SING N N 69
CU9 C22 H22 SING N N 70
CU9 C22 H22A SING N N 71
CU9 C25 H25 SING N N 72
CU9 C31 H31 SING N N 73
CU9 C32 H32 SING N N 74
CU9 C34 H34 SING N N 75
CU9 C35 H35 SING N N 76
CU9 C36 H36 SING N N 77
CU9 C36 H36A SING N N 78
CU9 C38 H38 SING N N 79
CU9 C38 H38A SING N N 80
CU9 C38 H38B SING N N 81
CU9 C41 H41 SING N N 82
CU9 C41 H41A SING N N 83
CU9 C41 H41B SING N N 84
CU9 C43 H43 SING N N 85
CU9 C43 H43A SING N N 86
CU9 C43 H43B SING N N 87
CU9 C44 H44 SING N N 88
CU9 C44 H44A SING N N 89
CU9 C44 H44B SING N N 90
CU9 C45 H45 SING N N 91
CU9 C45 H45A SING N N 92
CU9 C45 H45B SING N N 93
CU9 C46 H46 SING N N 94
CU9 C46 H46A SING N N 95
CU9 C46 H46B SING N N 96
CU9 C47 H47 SING N N 97
CU9 C47 H47A SING N N 98
CU9 C47 H47B SING N N 99
CU9 C48 H48 SING N N 100
CU9 C48 H48A SING N N 101
CU9 C48 H48B SING N N 102
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CU9 SMILES ACDLabs 12.01 O(c7ccc5cc7Oc1cc2c(cc1OC)CC[N+](C2Cc6ccc(Oc3c4c(cc(OC)c3OC)CC[N+](C)(C)C4C5)cc6)(C)C)C
CU9 SMILES_CANONICAL CACTVS 3.370 COc1ccc2C[C@@H]3c4c(CC[N+]3(C)C)cc(OC)c(OC)c4Oc5ccc(C[C@H]6c7cc(Oc1c2)c(OC)cc7CC[N+]6(C)C)cc5
CU9 SMILES CACTVS 3.370 COc1ccc2C[CH]3c4c(CC[N+]3(C)C)cc(OC)c(OC)c4Oc5ccc(C[CH]6c7cc(Oc1c2)c(OC)cc7CC[N+]6(C)C)cc5
CU9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 C[N+]1(CCc2cc(c3cc2[C@@H]1Cc4ccc(cc4)Oc5c6c(cc(c5OC)OC)CC[N+]([C@@H]6Cc7ccc(c(c7)O3)OC)(C)C)OC)C
CU9 SMILES "OpenEye OEToolkits" 1.7.0 C[N+]1(CCc2cc(c3cc2C1Cc4ccc(cc4)Oc5c6c(cc(c5OC)OC)CC[N+](C6Cc7ccc(c(c7)O3)OC)(C)C)OC)C
CU9 InChI InChI 1.03 InChI=1S/C40H48N2O6/c1-41(2)17-15-27-22-34(44-6)36-24-30(27)31(41)19-25-9-12-29(13-10-25)47-40-38-28(23-37(45-7)39(40)46-8)16-18-42(3,4)32(38)20-26-11-14-33(43-5)35(21-26)48-36/h9-14,21-24,31-32H,15-20H2,1-8H3/q+2/t31-,32+/m0/s1
CU9 InChIKey InChI 1.03 JFXBEKISTKFVAB-AJQTZOPKSA-N
#
_pdbx_chem_comp_identifier.comp_id CU9
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier "6,6',7',12'-tetramethoxy-2,2,2',2'-tetramethyltubocuraran-2,2'-diium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CU9 'Create component' 2010-10-29 RCSB
CU9 'Modify aromatic_flag' 2011-06-04 RCSB
CU9 'Modify descriptor' 2011-06-04 RCSB
CU9 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id CU9
_pdbx_chem_comp_synonyms.name metocurine
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id CU9
_pdbe_chem_comp_drugbank_details.drugbank_id DB01336
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Metocurine
_pdbe_chem_comp_drugbank_details.description
'Dimethyltubocurarinium (INN) or metocurine (USAN), also known as dimethyltubocurarine, is a non-depolarizing muscle relaxant. Patients on chronic anticonvulsant drugs are relatively resistant to metocurine. [A2393]'
_pdbe_chem_comp_drugbank_details.cas_number 5152-30-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Metocurine antagonizes the neurotransmitter action of acetylcholine by binding competitively with cholinergic receptor sites on the motor end-plate. This antagonism is inhibited, and neuromuscular block reversed, by acetylcholinesterase inhibitors such as neostigmine, edrophonium, and pyridostigmine.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
CU9 Dimethyltubocurarine ChEMBL 'International Nonproprietary Name'
CU9 metocurine wwPDB ?
CU9 Dimethylchondrocurarine DrugBank ?
CU9 O,O-Dimethylchondrocurarine DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id CU9
_pdbe_chem_comp_drugbank_classification.drugbank_id DB01336
_pdbe_chem_comp_drugbank_classification.parent Diarylethers
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
"This compound belongs to the class of organic compounds known as diarylethers. These are organic compounds containing the dialkyl ether functional group, with the formula ROR', where R and R' are aryl groups."
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
CU9 DB01336 'Neuronal acetylcholine receptor subunit alpha-2' Humans Q15822 yes 1
CU9 DB01336 'Muscarinic acetylcholine receptor M2' Humans P08172 unknown 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CU9 N1 N 4.478 -5.457 1
CU9 C2 C 4.732 -6.925 2
CU9 C3 C 6.130 -7.439 3
CU9 C4 C 7.275 -6.485 4
CU9 C5 C 7.021 -5.017 5
CU9 C6 C 5.622 -4.503 6
CU9 C7 C 8.673 -6.998 7
CU9 C8 C 9.817 -6.045 8
CU9 C9 C 9.563 -4.577 9
CU9 C10 C 8.165 -4.063 10
CU9 O11 O 10.921 -3.331 11
CU9 C12 C 10.915 -1.754 12
CU9 C13 C 12.404 -1.754 13
CU9 C14 C 13.149 -0.464 14
CU9 C15 C 12.404 0.826 15
CU9 C16 C 10.915 0.826 16
CU9 C17 C 10.170 -0.464 17
CU9 C18 C 10.170 2.116 18
CU9 C19 C 10.555 3.555 19
CU9 N20 N 11.845 4.300 20
CU9 C21 C 11.845 5.790 21
CU9 C22 C 10.555 6.535 22
CU9 C23 C 9.265 5.790 23
CU9 C24 C 9.265 4.300 24
CU9 C25 C 7.975 6.535 25
CU9 C26 C 6.684 5.790 26
CU9 C27 C 6.684 4.300 27
CU9 C28 C 7.975 3.555 28
CU9 O29 O 8.360 2.116 29
CU9 C30 C 7.615 0.826 30
CU9 C31 C 6.126 0.826 31
CU9 C32 C 5.381 -0.464 32
CU9 C33 C 6.126 -1.754 33
CU9 C34 C 7.615 -1.754 34
CU9 C35 C 8.360 -0.464 35
CU9 C36 C 5.381 -3.045 36
CU9 O37 O 11.225 -6.562 37
CU9 C38 C 11.481 -8.040 38
CU9 O39 O 13.154 -3.053 39
CU9 O40 O 5.386 6.540 40
CU9 C41 C 5.386 8.040 41
CU9 O42 O 5.386 3.550 42
CU9 C43 C 3.000 -5.713 43
CU9 C44 C 13.345 4.300 44
CU9 C45 C 12.595 3.001 45
CU9 C46 C 4.087 4.300 46
CU9 C47 C 3.518 -4.304 47
CU9 C48 C 14.654 -3.053 48
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CU9 N1 C2 SINGLE NONE 1
CU9 N1 C6 SINGLE NONE 2
CU9 N1 C43 SINGLE NONE 3
CU9 N1 C47 SINGLE NONE 4
CU9 C2 C3 SINGLE NONE 5
CU9 C3 C4 SINGLE NONE 6
CU9 C4 C5 DOUBLE NONE 7
CU9 C4 C7 SINGLE NONE 8
CU9 C5 C6 SINGLE NONE 9
CU9 C5 C10 SINGLE NONE 10
CU9 C6 C36 SINGLE NONE 11
CU9 C7 C8 DOUBLE NONE 12
CU9 C8 C9 SINGLE NONE 13
CU9 C8 O37 SINGLE NONE 14
CU9 C9 C10 DOUBLE NONE 15
CU9 C9 O11 SINGLE NONE 16
CU9 O11 C12 SINGLE NONE 17
CU9 C12 C13 DOUBLE NONE 18
CU9 C12 C17 SINGLE NONE 19
CU9 C13 C14 SINGLE NONE 20
CU9 C13 O39 SINGLE NONE 21
CU9 C14 C15 DOUBLE NONE 22
CU9 C15 C16 SINGLE NONE 23
CU9 C16 C17 DOUBLE NONE 24
CU9 C16 C18 SINGLE NONE 25
CU9 C18 C19 SINGLE NONE 26
CU9 C19 N20 SINGLE NONE 27
CU9 C19 C24 SINGLE NONE 28
CU9 N20 C21 SINGLE NONE 29
CU9 N20 C44 SINGLE NONE 30
CU9 N20 C45 SINGLE NONE 31
CU9 C21 C22 SINGLE NONE 32
CU9 C22 C23 SINGLE NONE 33
CU9 C23 C24 DOUBLE NONE 34
CU9 C23 C25 SINGLE NONE 35
CU9 C24 C28 SINGLE NONE 36
CU9 C25 C26 DOUBLE NONE 37
CU9 C26 C27 SINGLE NONE 38
CU9 C26 O40 SINGLE NONE 39
CU9 C27 C28 DOUBLE NONE 40
CU9 C27 O42 SINGLE NONE 41
CU9 C28 O29 SINGLE NONE 42
CU9 O29 C30 SINGLE NONE 43
CU9 C30 C31 DOUBLE NONE 44
CU9 C30 C35 SINGLE NONE 45
CU9 C31 C32 SINGLE NONE 46
CU9 C32 C33 DOUBLE NONE 47
CU9 C33 C34 SINGLE NONE 48
CU9 C33 C36 SINGLE NONE 49
CU9 C34 C35 DOUBLE NONE 50
CU9 O37 C38 SINGLE NONE 51
CU9 O39 C48 SINGLE NONE 52
CU9 O40 C41 SINGLE NONE 53
CU9 O42 C46 SINGLE NONE 54
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CU9 MurckoScaffold S1 scaffold 'c1cc2cc(c1)Oc1ccc3c(c1)[C@H](Cc1ccc(cc1)Oc1cccc4c1[C@@H](C2)[NH2+]CC4)[NH2+]CC3' InChI=1S/C32H30N2O2/c1-3-22-17-26(5-1)35-27-12-9-23-13-15-33-29(28(23)20-27)18-21-7-10-25(11-8-21)36-31-6-2-4-24-14-16-34-30(19-22)32(24)31/h1-12,17,20,29-30,33-34H,13-16,18-19H2/p+2/t29-,30+/m0/s1 JYUGMJOCKSHVAU-XZWHSSHBSA-P
CU9 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CU9 N1 S1 1
CU9 C2 S1 1
CU9 C3 S1 1
CU9 C4 S1 1
CU9 C5 S1 1
CU9 C6 S1 1
CU9 C7 S1 1
CU9 C8 S1 1
CU9 C9 S1 1
CU9 C10 S1 1
CU9 O11 S1 1
CU9 C12 S1 1
CU9 C13 S1 1
CU9 C14 S1 1
CU9 C15 S1 1
CU9 C16 S1 1
CU9 C17 S1 1
CU9 C18 S1 1
CU9 C19 S1 1
CU9 N20 S1 1
CU9 C21 S1 1
CU9 C22 S1 1
CU9 C23 S1 1
CU9 C24 S1 1
CU9 C25 S1 1
CU9 C26 S1 1
CU9 C27 S1 1
CU9 C28 S1 1
CU9 O29 S1 1
CU9 C30 S1 1
CU9 C31 S1 1
CU9 C32 S1 1
CU9 C33 S1 1
CU9 C34 S1 1
CU9 C35 S1 1
CU9 C36 S1 1
CU9 C4 F1 1
CU9 C5 F1 1
CU9 C10 F1 1
CU9 C9 F1 1
CU9 C8 F1 1
CU9 C7 F1 1
CU9 C12 F1 2
CU9 C13 F1 2
CU9 C14 F1 2
CU9 C15 F1 2
CU9 C16 F1 2
CU9 C17 F1 2
CU9 C23 F1 3
CU9 C24 F1 3
CU9 C28 F1 3
CU9 C27 F1 3
CU9 C26 F1 3
CU9 C25 F1 3
CU9 C30 F1 4
CU9 C31 F1 4
CU9 C32 F1 4
CU9 C33 F1 4
CU9 C34 F1 4
CU9 C35 F1 4
#
_pdbe_chem_comp_rdkit_properties.comp_id CU9
_pdbe_chem_comp_rdkit_properties.exactmw 652.350
_pdbe_chem_comp_rdkit_properties.amw 652.832
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 48
_pdbe_chem_comp_rdkit_properties.NumAtoms 96
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.400
_pdbe_chem_comp_rdkit_properties.NumRings 8
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 6
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 351.484
_pdbe_chem_comp_rdkit_properties.tpsa 55.380
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.424
_pdbe_chem_comp_rdkit_properties.CrippenMR 179.897
_pdbe_chem_comp_rdkit_properties.chi0v 23.344
_pdbe_chem_comp_rdkit_properties.chi1v 12.738
_pdbe_chem_comp_rdkit_properties.chi2v 6.554
_pdbe_chem_comp_rdkit_properties.chi3v 6.554
_pdbe_chem_comp_rdkit_properties.chi4v 4.484
_pdbe_chem_comp_rdkit_properties.chi0n 71.344
_pdbe_chem_comp_rdkit_properties.chi1n 36.738
_pdbe_chem_comp_rdkit_properties.chi2n 6.554
_pdbe_chem_comp_rdkit_properties.chi3n 6.554
_pdbe_chem_comp_rdkit_properties.chi4n 4.484
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.400
_pdbe_chem_comp_rdkit_properties.kappa1 8.306
_pdbe_chem_comp_rdkit_properties.kappa2 12.243
_pdbe_chem_comp_rdkit_properties.kappa3 5.606
_pdbe_chem_comp_rdkit_properties.Phi 2.119
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CU9 UniChem ChEMBL CHEMBL1259
CU9 UniChem DrugBank DB01336
CU9 UniChem PDBe CU9
CU9 UniChem 'KEGG LIGAND' C07919
CU9 UniChem ChEBI 6900
CU9 UniChem ZINC ZINC000004097448
CU9 UniChem eMolecules 36726843
CU9 UniChem fdasrs V0M92G2U26
CU9 UniChem PharmGKB PA164749507
CU9 UniChem HMDB HMDB0015429
CU9 UniChem Nikkaji J96.562F
CU9 UniChem BindingDb 50094708
CU9 UniChem BindingDb 50237609
CU9 UniChem 'EPA CompTox Dashboard' DTXSID0048262
CU9 UniChem DrugCentral 908
CU9 UniChem rxnorm METOCURINE
CU9 UniChem rxnorm 'METOCURINE IODIDE'
CU9 UniChem 'Probes And Drugs' PD009550
CU9 UniChem ACTor 5152-30-7
CU9 UniChem SureChEMBL SCHEMBL447436
CU9 UniChem PubChem 21233
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CU9 N1 -5.756 -2.536 0.319 ETKDGv3 1
CU9 C2 -5.559 -2.537 -1.157 ETKDGv3 2
CU9 C3 -4.953 -1.222 -1.705 ETKDGv3 3
CU9 C4 -4.039 -0.495 -0.746 ETKDGv3 4
CU9 C5 -3.931 -0.864 0.546 ETKDGv3 5
CU9 C6 -4.461 -2.210 1.013 ETKDGv3 6
CU9 C7 -3.321 0.713 -1.221 ETKDGv3 7
CU9 C8 -2.620 1.483 -0.363 ETKDGv3 8
CU9 C9 -2.621 1.138 1.082 ETKDGv3 9
CU9 C10 -3.217 0.015 1.499 ETKDGv3 10
CU9 O11 -2.095 2.009 2.040 ETKDGv3 11
CU9 C12 -0.846 2.637 1.968 ETKDGv3 12
CU9 C13 -0.679 3.810 2.600 ETKDGv3 13
CU9 C14 0.670 4.428 2.649 ETKDGv3 14
CU9 C15 1.717 3.805 2.103 ETKDGv3 15
CU9 C16 1.541 2.519 1.386 ETKDGv3 16
CU9 C17 0.310 1.980 1.302 ETKDGv3 17
CU9 C18 2.756 1.735 0.949 ETKDGv3 18
CU9 C19 2.897 1.525 -0.600 ETKDGv3 19
CU9 N20 3.658 2.602 -1.324 ETKDGv3 20
CU9 C21 5.092 2.625 -0.914 ETKDGv3 21
CU9 C22 5.793 1.254 -1.016 ETKDGv3 22
CU9 C23 4.897 0.064 -0.779 ETKDGv3 23
CU9 C24 3.557 0.169 -0.803 ETKDGv3 24
CU9 C25 5.521 -1.267 -0.638 ETKDGv3 25
CU9 C26 4.772 -2.383 -0.547 ETKDGv3 26
CU9 C27 3.286 -2.280 -0.708 ETKDGv3 27
CU9 C28 2.722 -1.059 -0.854 ETKDGv3 28
CU9 O29 1.371 -0.911 -1.199 ETKDGv3 29
CU9 C30 0.306 -1.640 -0.668 ETKDGv3 30
CU9 C31 -0.637 -2.094 -1.498 ETKDGv3 31
CU9 C32 -1.831 -2.772 -0.967 ETKDGv3 32
CU9 C33 -2.016 -2.882 0.361 ETKDGv3 33
CU9 C34 -0.943 -2.424 1.281 ETKDGv3 34
CU9 C35 0.168 -1.856 0.792 ETKDGv3 35
CU9 C36 -3.354 -3.339 0.904 ETKDGv3 36
CU9 O37 -1.910 2.620 -0.782 ETKDGv3 37
CU9 C38 -1.718 3.006 -2.139 ETKDGv3 38
CU9 O39 -1.787 4.407 3.219 ETKDGv3 39
CU9 O40 5.361 -3.640 -0.328 ETKDGv3 40
CU9 C41 6.756 -3.878 -0.159 ETKDGv3 41
CU9 O42 2.449 -3.408 -0.785 ETKDGv3 42
CU9 C43 -6.797 -1.533 0.690 ETKDGv3 43
CU9 C44 3.065 3.937 -1.062 ETKDGv3 44
CU9 C45 3.562 2.374 -2.794 ETKDGv3 45
CU9 C46 2.855 -4.767 -0.678 ETKDGv3 46
CU9 C47 -6.283 -3.861 0.750 ETKDGv3 47
CU9 C48 -1.738 5.643 3.922 ETKDGv3 48
CU9 H2 -4.898 -3.376 -1.462 ETKDGv3 49
CU9 H2A -6.526 -2.724 -1.678 ETKDGv3 50
CU9 H3 -4.400 -1.440 -2.644 ETKDGv3 51
CU9 H3A -5.784 -0.532 -1.968 ETKDGv3 52
CU9 H6 -4.675 -2.105 2.103 ETKDGv3 53
CU9 H7 -3.370 0.958 -2.274 ETKDGv3 54
CU9 H10 -3.208 -0.234 2.553 ETKDGv3 55
CU9 H14 0.830 5.366 3.164 ETKDGv3 56
CU9 H15 2.702 4.242 2.207 ETKDGv3 57
CU9 H17 0.171 1.017 0.831 ETKDGv3 58
CU9 H18 3.669 2.180 1.386 ETKDGv3 59
CU9 H18A 2.674 0.746 1.456 ETKDGv3 60
CU9 H19 1.868 1.476 -1.023 ETKDGv3 61
CU9 H21 5.661 3.354 -1.536 ETKDGv3 62
CU9 H21A 5.209 2.996 0.126 ETKDGv3 63
CU9 H22 6.639 1.228 -0.295 ETKDGv3 64
CU9 H22A 6.227 1.152 -2.034 ETKDGv3 65
CU9 H25 6.600 -1.314 -0.570 ETKDGv3 66
CU9 H31 -0.549 -1.932 -2.565 ETKDGv3 67
CU9 H32 -2.590 -3.097 -1.663 ETKDGv3 68
CU9 H34 -1.062 -2.534 2.351 ETKDGv3 69
CU9 H35 0.941 -1.509 1.466 ETKDGv3 70
CU9 H36 -3.193 -3.775 1.914 ETKDGv3 71
CU9 H36A -3.672 -4.191 0.278 ETKDGv3 72
CU9 H38 -1.072 3.907 -2.171 ETKDGv3 73
CU9 H38A -1.216 2.190 -2.701 ETKDGv3 74
CU9 H38B -2.694 3.252 -2.608 ETKDGv3 75
CU9 H41 6.919 -4.962 0.009 ETKDGv3 76
CU9 H41A 7.136 -3.321 0.723 ETKDGv3 77
CU9 H41B 7.309 -3.575 -1.074 ETKDGv3 78
CU9 H43 -7.757 -1.734 0.162 ETKDGv3 79
CU9 H43A -6.504 -0.495 0.431 ETKDGv3 80
CU9 H43B -6.999 -1.555 1.784 ETKDGv3 81
CU9 H44 3.281 4.285 -0.034 ETKDGv3 82
CU9 H44A 1.962 3.924 -1.211 ETKDGv3 83
CU9 H44B 3.493 4.711 -1.738 ETKDGv3 84
CU9 H45 3.975 1.388 -3.094 ETKDGv3 85
CU9 H45A 2.502 2.407 -3.134 ETKDGv3 86
CU9 H45B 4.125 3.148 -3.362 ETKDGv3 87
CU9 H46 3.299 -4.958 0.321 ETKDGv3 88
CU9 H46A 1.962 -5.416 -0.789 ETKDGv3 89
CU9 H46B 3.570 -5.019 -1.489 ETKDGv3 90
CU9 H47 -7.339 -4.002 0.426 ETKDGv3 91
CU9 H47A -5.731 -4.712 0.302 ETKDGv3 92
CU9 H47B -6.250 -3.963 1.857 ETKDGv3 93
CU9 H48 -1.042 5.565 4.784 ETKDGv3 94
CU9 H48A -2.751 5.884 4.304 ETKDGv3 95
CU9 H48B -1.412 6.457 3.240 ETKDGv3 96
#