data_D7P
#
_chem_comp.id D7P
_chem_comp.name D-PHENYLALANYL-N~5~-[(2,2-DIHYDROXYHYDRAZINO)(IMINO)METHYL]-D-ORNITHINAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C15 H25 N7 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "D-PHENYLALANINE-D-NITROARGININE AMIDE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-12-18
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 367.404
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code D7P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1RS7
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D7P "N1'" "N1'" N 0 1 N N N N N N 6.488 2.173 22.705 -0.571 -4.866 -0.591 "N1'" D7P 1
D7P "N'" "N'" N 0 1 N N N N N N 4.861 2.220 28.276 -3.588 0.496 2.175 "N'" D7P 2
D7P "CA'" "CA'" C 0 1 N N R N N N 5.253 2.965 27.057 -2.987 0.214 0.865 "CA'" D7P 3
D7P "C'" "C'" C 0 1 N N N N N N 5.948 1.972 26.095 -2.156 -1.040 0.954 "C'" D7P 4
D7P "O'" "O'" O 0 1 N N N N N N 5.452 0.870 25.851 -2.344 -1.830 1.855 "O'" D7P 5
D7P "CB'" "CB'" C 0 1 N N N N N N 3.986 3.603 26.433 -4.094 0.019 -0.173 "CB'" D7P 6
D7P "CG'" "CG'" C 0 1 Y N N N N N 3.161 4.476 27.391 -4.849 1.312 -0.351 "CG'" D7P 7
D7P CD1 CD1 C 0 1 Y N N N N N 3.730 5.642 27.964 -4.437 2.227 -1.301 CD1 D7P 8
D7P CE1 CE1 C 0 1 Y N N N N N 2.977 6.449 28.845 -5.129 3.413 -1.464 CE1 D7P 9
D7P "CZ'" "CZ'" C 0 1 Y N N N N N 1.645 6.092 29.163 -6.233 3.682 -0.677 "CZ'" D7P 10
D7P CE2 CE2 C 0 1 Y N N N N N 1.065 4.928 28.597 -6.645 2.767 0.272 CE2 D7P 11
D7P CD2 CD2 C 0 1 Y N N N N N 1.824 4.118 27.714 -5.956 1.579 0.433 CD2 D7P 12
D7P N N N 0 1 N N N N N N 7.115 2.347 25.543 -1.203 -1.284 0.032 N D7P 13
D7P CA CA C 0 1 N N R N N N 7.890 1.456 24.602 -0.395 -2.503 0.119 CA D7P 14
D7P C C C 0 1 N N N N N N 7.129 1.188 23.306 -1.127 -3.639 -0.548 C D7P 15
D7P O O O 0 1 N N N N N N 7.057 0.088 22.823 -2.216 -3.449 -1.047 O D7P 16
D7P CB CB C 0 1 N N N N N N 9.222 2.110 24.417 0.945 -2.277 -0.584 CB D7P 17
D7P CG CG C 0 1 N N N N N N 10.344 1.093 24.207 1.742 -1.209 0.169 CG D7P 18
D7P CD CD C 0 1 N N N N N N 11.663 1.802 23.996 3.082 -0.983 -0.534 CD D7P 19
D7P NE NE N 0 1 N N N N N N 12.776 0.848 24.057 3.845 0.039 0.186 NE D7P 20
D7P CZ CZ C 0 1 N N N N N N 13.785 0.702 23.233 5.090 0.412 -0.262 CZ D7P 21
D7P NH1 NH1 N 0 1 N N N N N N 13.896 1.489 22.177 5.806 1.371 0.414 NH1 D7P 22
D7P NH2 NH2 N 0 1 N N N N N N 14.669 -0.253 23.521 5.592 -0.145 -1.329 NH2 D7P 23
D7P NO NO N 0 1 N N N N N N 14.797 1.479 21.176 7.043 1.741 -0.032 NO D7P 24
D7P O2 O2 O 0 1 N N N N N N 14.557 2.214 20.150 7.017 3.196 -0.184 O2 D7P 25
D7P O3 O3 O 0 1 N N N N N N 15.871 0.786 21.214 7.985 1.448 1.048 O3 D7P 26
D7P "H1'1" "1H1'" H 0 0 N N N N N N 5.980 1.994 21.839 0.301 -5.018 -0.193 "H1'1" D7P 27
D7P "H1'2" "2H1'" H 0 0 N N N N N N 6.549 3.105 23.114 -1.042 -5.597 -1.021 "H1'2" D7P 28
D7P "HN'1" "1HN'" H 0 0 N N N N N N 5.645 1.732 28.710 -4.214 1.277 2.045 "HN'1" D7P 29
D7P "HN'2" "2HN'" H 0 0 N N N N N N 4.403 2.875 28.910 -4.163 -0.300 2.408 "HN'2" D7P 30
D7P "HA'" "HA'" H 0 1 N N N N N N 5.967 3.791 27.284 -2.353 1.049 0.568 "HA'" D7P 31
D7P "HB'1" "1HB'" H 0 0 N N N N N N 3.342 2.815 25.979 -3.652 -0.278 -1.124 "HB'1" D7P 32
D7P "HB'2" "2HB'" H 0 0 N N N N N N 4.257 4.183 25.520 -4.779 -0.757 0.168 "HB'2" D7P 33
D7P HD1 HD1 H 0 1 N N N N N N 4.769 5.924 27.722 -3.574 2.016 -1.916 HD1 D7P 34
D7P HE1 HE1 H 0 1 N N N N N N 3.428 7.355 29.283 -4.806 4.128 -2.206 HE1 D7P 35
D7P "HZ'" "HZ'" H 0 1 N N N N N N 1.058 6.722 29.853 -6.773 4.609 -0.804 "HZ'" D7P 36
D7P HE2 HE2 H 0 1 N N N N N N 0.026 4.653 28.843 -7.507 2.978 0.887 HE2 D7P 37
D7P HD2 HD2 H 0 1 N N N N N N 1.375 3.210 27.279 -6.278 0.864 1.175 HD2 D7P 38
D7P HN HN H 0 1 N N N N N N 7.405 3.282 25.830 -1.052 -0.652 -0.688 HN D7P 39
D7P HA HA H 0 1 N N N N N N 8.035 0.433 25.022 -0.219 -2.749 1.166 HA D7P 40
D7P HB1 1HB H 0 1 N N N N N N 9.454 2.797 25.264 1.510 -3.209 -0.598 HB1 D7P 41
D7P HB2 2HB H 0 1 N N N N N N 9.193 2.855 23.588 0.768 -1.944 -1.607 HB2 D7P 42
D7P HG1 1HG H 0 1 N N N N N N 10.114 0.386 23.376 1.177 -0.277 0.182 HG1 D7P 43
D7P HG2 2HG H 0 1 N N N N N N 10.398 0.355 25.041 1.919 -1.542 1.191 HG2 D7P 44
D7P HD1A 1HD H 0 0 N N N N N N 11.800 2.645 24.713 3.647 -1.916 -0.548 HD1A D7P 45
D7P HD2A 2HD H 0 0 N N N N N N 11.671 2.388 23.047 2.905 -0.651 -1.557 HD2A D7P 46
D7P HNE HNE H 0 1 N N N N N N 12.340 -0.072 24.117 3.472 0.453 0.980 HNE D7P 47
D7P HH1 HH1 H 0 1 N N N N N N 13.933 2.435 22.556 5.433 1.785 1.207 HH1 D7P 48
D7P HH2 HH2 H 0 1 N N N N N N 14.374 -1.204 23.301 6.470 0.118 -1.646 HH2 D7P 49
D7P HO2 HO2 H 0 1 N N N N N N 15.193 2.207 19.444 7.893 3.459 -0.500 HO2 D7P 50
D7P HO3 HO3 H 0 1 N N N N N N 16.507 0.779 20.508 8.861 1.709 0.734 HO3 D7P 51
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D7P "N1'" C SING N N 1
D7P "N1'" "H1'1" SING N N 2
D7P "N1'" "H1'2" SING N N 3
D7P "N'" "CA'" SING N N 4
D7P "N'" "HN'1" SING N N 5
D7P "N'" "HN'2" SING N N 6
D7P "CA'" "C'" SING N N 7
D7P "CA'" "CB'" SING N N 8
D7P "CA'" "HA'" SING N N 9
D7P "C'" "O'" DOUB N N 10
D7P "C'" N SING N N 11
D7P "CB'" "CG'" SING N N 12
D7P "CB'" "HB'1" SING N N 13
D7P "CB'" "HB'2" SING N N 14
D7P "CG'" CD1 DOUB Y N 15
D7P "CG'" CD2 SING Y N 16
D7P CD1 CE1 SING Y N 17
D7P CD1 HD1 SING N N 18
D7P CE1 "CZ'" DOUB Y N 19
D7P CE1 HE1 SING N N 20
D7P "CZ'" CE2 SING Y N 21
D7P "CZ'" "HZ'" SING N N 22
D7P CE2 CD2 DOUB Y N 23
D7P CE2 HE2 SING N N 24
D7P CD2 HD2 SING N N 25
D7P N CA SING N N 26
D7P N HN SING N N 27
D7P CA C SING N N 28
D7P CA CB SING N N 29
D7P CA HA SING N N 30
D7P C O DOUB N N 31
D7P CB CG SING N N 32
D7P CB HB1 SING N N 33
D7P CB HB2 SING N N 34
D7P CG CD SING N N 35
D7P CG HG1 SING N N 36
D7P CG HG2 SING N N 37
D7P CD NE SING N N 38
D7P CD HD1A SING N N 39
D7P CD HD2A SING N N 40
D7P NE CZ SING N N 41
D7P NE HNE SING N N 42
D7P CZ NH1 SING N N 43
D7P CZ NH2 DOUB N N 44
D7P NH1 NO SING N N 45
D7P NH1 HH1 SING N N 46
D7P NH2 HH2 SING N N 47
D7P NO O2 SING N N 48
D7P NO O3 SING N N 49
D7P O2 HO2 SING N N 50
D7P O3 HO3 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D7P SMILES ACDLabs 10.04 O=C(N)C(NC(=O)C(N)Cc1ccccc1)CCCNC(=[N@H])NN(O)O
D7P SMILES_CANONICAL CACTVS 3.341 N[C@H](Cc1ccccc1)C(=O)N[C@H](CCCNC(=N)NN(O)O)C(N)=O
D7P SMILES CACTVS 3.341 N[CH](Cc1ccccc1)C(=O)N[CH](CCCNC(=N)NN(O)O)C(N)=O
D7P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)C[C@H](C(=O)N[C@H](CCCNC(=N)NN(O)O)C(=O)N)N
D7P SMILES "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)CC(C(=O)NC(CCCNC(=N)NN(O)O)C(=O)N)N
D7P InChI InChI 1.03 InChI=1S/C15H25N7O4/c16-11(9-10-5-2-1-3-6-10)14(24)20-12(13(17)23)7-4-8-19-15(18)21-22(25)26/h1-3,5-6,11-12,25-26H,4,7-9,16H2,(H2,17,23)(H,20,24)(H3,18,19,21)/t11-,12-/m1/s1
D7P InChIKey InChI 1.03 XHGCEQHFMHULSW-VXGBXAGGSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
D7P "SYSTEMATIC NAME" ACDLabs 10.04 D-phenylalanyl-N~5~-[(E)-(2,2-dihydroxyhydrazino)(imino)methyl]-D-ornithinamide
D7P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2R)-2-[[(2R)-2-amino-3-phenyl-propanoyl]amino]-5-[[N-(dihydroxyamino)carbamimidoyl]amino]pentanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D7P 'Create component' 2003-12-18 RCSB
D7P 'Modify descriptor' 2011-06-04 RCSB
D7P 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id D7P
_pdbx_chem_comp_synonyms.name "D-PHENYLALANINE-D-NITROARGININE AMIDE"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id D7P
_pdbe_chem_comp_synonyms.name 'D-PHENYLALANINE-D-NITROARGININE AMIDE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.09.6 'Core functionality.'
pdbeccdutils 0.8.6 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
D7P "N1'" N 12.899 -0.233 1
D7P "N'" N 10.301 -4.732 2
D7P "CA'" C 9.002 -3.982 3
D7P "C'" C 9.002 -2.482 4
D7P "O'" O 7.702 -1.732 5
D7P "CB'" C 7.702 -4.732 6
D7P "CG'" C 7.702 -6.232 7
D7P CD1 C 6.404 -6.982 8
D7P CE1 C 6.404 -8.482 9
D7P "CZ'" C 7.702 -9.232 10
D7P CE2 C 9.002 -8.482 11
D7P CD2 C 9.002 -6.982 12
D7P N N 10.301 -1.732 13
D7P CA C 10.301 -0.233 14
D7P C C 11.600 0.517 15
D7P O O 11.600 2.018 16
D7P CB C 9.002 0.517 17
D7P CG C 9.002 2.018 18
D7P CD C 7.702 2.768 19
D7P NE N 7.702 4.268 20
D7P CZ C 6.404 5.018 21
D7P NH1 N 6.404 6.518 22
D7P NH2 N 5.104 4.268 23
D7P NO N 5.104 7.268 24
D7P O2 O 5.104 8.768 25
D7P O3 O 3.805 6.518 26
D7P HH2 H 5.105 2.768 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
D7P "N1'" C SINGLE NONE 1
D7P "CA'" "N'" SINGLE BEGINDASH 2
D7P "CA'" "C'" SINGLE NONE 3
D7P "CA'" "CB'" SINGLE NONE 4
D7P "C'" "O'" DOUBLE NONE 5
D7P "C'" N SINGLE NONE 6
D7P "CB'" "CG'" SINGLE NONE 7
D7P "CG'" CD1 DOUBLE NONE 8
D7P "CG'" CD2 SINGLE NONE 9
D7P CD1 CE1 SINGLE NONE 10
D7P CE1 "CZ'" DOUBLE NONE 11
D7P "CZ'" CE2 SINGLE NONE 12
D7P CE2 CD2 DOUBLE NONE 13
D7P N CA SINGLE NONE 14
D7P CA C SINGLE NONE 15
D7P CA CB SINGLE BEGINDASH 16
D7P C O DOUBLE NONE 17
D7P CB CG SINGLE NONE 18
D7P CG CD SINGLE NONE 19
D7P CD NE SINGLE NONE 20
D7P NE CZ SINGLE ENDUPRIGHT 21
D7P CZ NH1 SINGLE ENDUPRIGHT 22
D7P CZ NH2 DOUBLE NONE 23
D7P NH1 NO SINGLE NONE 24
D7P NO O2 SINGLE NONE 25
D7P NO O3 SINGLE NONE 26
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
D7P MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
D7P amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
D7P peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
D7P phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
D7P "CG'" S1 1
D7P CD1 S1 1
D7P CE1 S1 1
D7P "CZ'" S1 1
D7P CE2 S1 1
D7P CD2 S1 1
D7P "N1'" F1 1
D7P C F1 1
D7P O F1 1
D7P CA F1 1
D7P N F1 2
D7P "C'" F1 2
D7P "O'" F1 2
D7P "CA'" F1 2
D7P "O'" F2 1
D7P "C'" F2 1
D7P "CA'" F2 1
D7P "N'" F2 1
D7P O F2 2
D7P C F2 2
D7P CA F2 2
D7P N F2 2
D7P "CG'" F3 1
D7P CD1 F3 1
D7P CE1 F3 1
D7P "CZ'" F3 1
D7P CE2 F3 1
D7P CD2 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id D7P
_pdbe_chem_comp_rdkit_properties.exactmw 367.197
_pdbe_chem_comp_rdkit_properties.amw 367.410
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 10
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 13
_pdbe_chem_comp_rdkit_properties.NumHBD 8
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 51
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.400
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 186.042
_pdbe_chem_comp_rdkit_properties.tpsa 189.820
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.639
_pdbe_chem_comp_rdkit_properties.CrippenMR 92.492
_pdbe_chem_comp_rdkit_properties.chi0v 12.263
_pdbe_chem_comp_rdkit_properties.chi1v 6.012
_pdbe_chem_comp_rdkit_properties.chi2v 1.926
_pdbe_chem_comp_rdkit_properties.chi3v 1.926
_pdbe_chem_comp_rdkit_properties.chi4v 1.029
_pdbe_chem_comp_rdkit_properties.chi0n 37.263
_pdbe_chem_comp_rdkit_properties.chi1n 17.906
_pdbe_chem_comp_rdkit_properties.chi2n 1.926
_pdbe_chem_comp_rdkit_properties.chi3n 1.926
_pdbe_chem_comp_rdkit_properties.chi4n 1.029
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.730
_pdbe_chem_comp_rdkit_properties.kappa1 4.953
_pdbe_chem_comp_rdkit_properties.kappa2 10.996
_pdbe_chem_comp_rdkit_properties.kappa3 8.392
_pdbe_chem_comp_rdkit_properties.Phi 2.095
#
_pdbe_chem_comp_external_mappings.comp_id D7P
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 5288020
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
D7P "N1'" 1.463 2.156 2.690 ETKDGv3 1
D7P "N'" -3.789 -0.158 1.777 ETKDGv3 2
D7P "CA'" -3.424 0.822 0.751 ETKDGv3 3
D7P "C'" -1.966 1.179 0.883 ETKDGv3 4
D7P "O'" -1.627 2.394 0.917 ETKDGv3 5
D7P "CB'" -3.692 0.263 -0.659 ETKDGv3 6
D7P "CG'" -5.166 0.102 -0.927 ETKDGv3 7
D7P CD1 -5.763 -1.100 -0.820 ETKDGv3 8
D7P CE1 -7.215 -1.235 -1.061 ETKDGv3 9
D7P "CZ'" -7.945 -0.159 -1.381 ETKDGv3 10
D7P CE2 -7.300 1.165 -1.492 ETKDGv3 11
D7P CD2 -5.985 1.291 -1.277 ETKDGv3 12
D7P N -0.967 0.149 0.943 ETKDGv3 13
D7P CA 0.461 0.456 1.079 ETKDGv3 14
D7P C 0.738 0.945 2.477 ETKDGv3 15
D7P O 0.346 0.272 3.468 ETKDGv3 16
D7P CB 1.305 -0.796 0.753 ETKDGv3 17
D7P CG 2.827 -0.560 0.789 ETKDGv3 18
D7P CD 3.312 0.369 -0.334 ETKDGv3 19
D7P NE 4.774 0.388 -0.388 ETKDGv3 20
D7P CZ 5.592 -0.674 -0.916 ETKDGv3 21
D7P NH1 7.016 -0.568 -0.823 ETKDGv3 22
D7P NH2 5.068 -1.717 -1.486 ETKDGv3 23
D7P NO 7.845 -1.583 -1.327 ETKDGv3 24
D7P O2 8.690 -1.002 -2.213 ETKDGv3 25
D7P O3 8.602 -2.027 -0.295 ETKDGv3 26
D7P "H1'1" 1.809 2.723 1.884 ETKDGv3 27
D7P "H1'2" 1.660 2.487 3.661 ETKDGv3 28
D7P "HN'1" -3.550 0.241 2.714 ETKDGv3 29
D7P "HN'2" -4.829 -0.267 1.777 ETKDGv3 30
D7P "HA'" -4.030 1.747 0.897 ETKDGv3 31
D7P "HB'1" -3.163 -0.708 -0.790 ETKDGv3 32
D7P "HB'2" -3.275 0.961 -1.419 ETKDGv3 33
D7P HD1 -5.191 -1.979 -0.550 ETKDGv3 34
D7P HE1 -7.686 -2.205 -0.976 ETKDGv3 35
D7P "HZ'" -9.008 -0.257 -1.556 ETKDGv3 36
D7P HE2 -7.894 2.033 -1.747 ETKDGv3 37
D7P HD2 -5.519 2.265 -1.357 ETKDGv3 38
D7P HN -1.277 -0.849 0.896 ETKDGv3 39
D7P HA 0.711 1.249 0.343 ETKDGv3 40
D7P HB1 1.024 -1.174 -0.255 ETKDGv3 41
D7P HB2 1.059 -1.600 1.481 ETKDGv3 42
D7P HG1 3.324 -1.548 0.688 ETKDGv3 43
D7P HG2 3.132 -0.144 1.773 ETKDGv3 44
D7P HD1A 2.896 0.069 -1.319 ETKDGv3 45
D7P HD2A 2.956 1.401 -0.128 ETKDGv3 46
D7P HNE 5.256 1.247 -0.038 ETKDGv3 47
D7P HH1 7.441 0.270 -0.364 ETKDGv3 48
D7P HH2 4.042 -1.864 -1.601 ETKDGv3 49
D7P HO2 8.523 -1.479 -3.066 ETKDGv3 50
D7P HO3 8.388 -2.991 -0.224 ETKDGv3 51
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