data_DW9 # _chem_comp.id DW9 _chem_comp.name 2-azanyl-6-[(2-azanyl-4-oxidanyl-1,3-benzothiazol-6-yl)disulfanyl]-1,3-benzothiazol-4-ol _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H10 N4 O2 S4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-09-13 _chem_comp.pdbx_modified_date 2020-08-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 394.515 _chem_comp.one_letter_code ? _chem_comp.three_letter_code DW9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6KQQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal DW9 C1 C1 C 0 1 Y N N N N N -12.596 4.761 9.207 3.575 -0.614 -0.689 C1 DW9 1 DW9 C2 C2 C 0 1 Y N N N N N -11.262 5.044 9.506 3.832 0.094 0.487 C2 DW9 2 DW9 C3 C3 C 0 1 Y N N N N N -10.261 4.988 8.530 2.961 1.092 0.917 C3 DW9 3 DW9 C4 C4 C 0 1 Y N N N N N -10.689 4.616 7.258 1.827 1.393 0.180 C4 DW9 4 DW9 C5 C5 C 0 1 Y N N N N N -12.013 4.354 6.948 1.559 0.693 -0.996 C5 DW9 5 DW9 C6 C6 C 0 1 Y N N N N N -12.979 4.414 7.905 2.411 -0.298 -1.427 C6 DW9 6 DW9 C8 C7 C 0 1 Y N N N N N -12.931 5.207 11.453 5.499 -1.662 -0.134 C8 DW9 7 DW9 C14 C8 C 0 1 Y N N N N N -8.669 7.440 5.146 -1.824 1.389 -0.178 C14 DW9 8 DW9 C15 C9 C 0 1 Y N N N N N -8.650 7.917 6.458 -1.555 0.684 0.994 C15 DW9 9 DW9 C16 C10 C 0 1 Y N N N N N -8.206 9.213 6.651 -2.409 -0.305 1.425 C16 DW9 10 DW9 C17 C11 C 0 1 Y N N N N N -7.764 9.963 5.523 -3.574 -0.619 0.686 C17 DW9 11 DW9 C18 C12 C 0 1 Y N N N N N -7.757 9.409 4.246 -3.832 0.094 -0.487 C18 DW9 12 DW9 C19 C13 C 0 1 Y N N N N N -8.195 8.135 4.061 -2.960 1.093 -0.914 C19 DW9 13 DW9 C21 C14 C 0 1 Y N N N N N -6.913 11.772 4.389 -5.501 -1.661 0.131 C21 DW9 14 DW9 N7 N1 N 0 1 Y N N N N N -13.467 4.861 10.291 4.518 -1.544 -0.958 N7 DW9 15 DW9 N10 N2 N 0 1 N N N N N N -13.653 5.371 12.702 6.539 -2.563 -0.269 N10 DW9 16 DW9 N20 N3 N 0 1 Y N N N N N -7.286 11.261 5.574 -4.517 -1.549 0.953 N20 DW9 17 DW9 N24 N4 N 0 1 N N N N N N -6.391 13.102 4.199 -6.543 -2.560 0.265 N24 DW9 18 DW9 O11 O1 O 0 1 N N N N N N -14.300 4.120 7.566 2.136 -0.970 -2.576 O11 DW9 19 DW9 O23 O2 O 0 1 N N N N N N -8.210 9.773 7.950 -2.132 -0.984 2.570 O23 DW9 20 DW9 S9 S1 S 0 1 Y N N N N N -11.270 5.415 11.173 5.330 -0.516 1.188 S9 DW9 21 DW9 S12 S2 S 0 1 N N N N N N -9.807 4.430 5.726 0.727 2.655 0.727 S12 DW9 22 DW9 S13 S3 S 0 1 N N N N N N -9.145 5.787 4.705 -0.728 2.658 -0.718 S13 DW9 23 DW9 S22 S4 S 0 1 Y N N N N N -7.139 10.589 3.191 -5.333 -0.509 -1.186 S22 DW9 24 DW9 H1 H1 H 0 1 N N N N N N -9.228 5.217 8.748 3.169 1.633 1.828 H1 DW9 25 DW9 H2 H2 H 0 1 N N N N N N -12.283 4.099 5.934 0.675 0.928 -1.570 H2 DW9 26 DW9 H3 H3 H 0 1 N N N N N N -8.968 7.301 7.286 -0.669 0.914 1.567 H3 DW9 27 DW9 H4 H4 H 0 1 N N N N N N -8.171 7.680 3.082 -3.170 1.639 -1.822 H4 DW9 28 DW9 H5 H5 H 0 1 N N N N N N -14.624 5.182 12.554 6.563 -3.165 -1.029 H5 DW9 29 DW9 H6 H6 H 0 1 N N N N N N -13.290 4.735 13.383 7.245 -2.592 0.396 H6 DW9 30 DW9 H7 H7 H 0 1 N N N N N N -6.172 13.240 3.233 -6.566 -3.166 1.022 H7 DW9 31 DW9 H8 H8 H 0 1 N N N N N N -7.076 13.773 4.484 -7.250 -2.585 -0.398 H8 DW9 32 DW9 H9 H9 H 0 1 N N N N N N -14.851 4.205 8.335 2.518 -0.568 -3.368 H9 DW9 33 DW9 H10 H10 H 0 1 N N N N N N -8.534 9.131 8.571 -2.508 -0.583 3.365 H10 DW9 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DW9 S22 C18 SING Y N 1 DW9 S22 C21 SING Y N 2 DW9 C19 C18 DOUB Y N 3 DW9 C19 C14 SING Y N 4 DW9 N24 C21 SING N N 5 DW9 C18 C17 SING Y N 6 DW9 C21 N20 DOUB Y N 7 DW9 S13 C14 SING N N 8 DW9 S13 S12 SING N N 9 DW9 C14 C15 DOUB Y N 10 DW9 C17 N20 SING Y N 11 DW9 C17 C16 DOUB Y N 12 DW9 S12 C4 SING N N 13 DW9 C15 C16 SING Y N 14 DW9 C16 O23 SING N N 15 DW9 C5 C4 DOUB Y N 16 DW9 C5 C6 SING Y N 17 DW9 C4 C3 SING Y N 18 DW9 O11 C6 SING N N 19 DW9 C6 C1 DOUB Y N 20 DW9 C3 C2 DOUB Y N 21 DW9 C1 C2 SING Y N 22 DW9 C1 N7 SING Y N 23 DW9 C2 S9 SING Y N 24 DW9 N7 C8 DOUB Y N 25 DW9 S9 C8 SING Y N 26 DW9 C8 N10 SING N N 27 DW9 C3 H1 SING N N 28 DW9 C5 H2 SING N N 29 DW9 C15 H3 SING N N 30 DW9 C19 H4 SING N N 31 DW9 N10 H5 SING N N 32 DW9 N10 H6 SING N N 33 DW9 N24 H7 SING N N 34 DW9 N24 H8 SING N N 35 DW9 O11 H9 SING N N 36 DW9 O23 H10 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor DW9 InChI InChI 1.03 InChI=1S/C14H10N4O2S4/c15-13-17-11-7(19)1-5(3-9(11)21-13)23-24-6-2-8(20)12-10(4-6)22-14(16)18-12/h1-4,19-20H,(H2,15,17)(H2,16,18) DW9 InChIKey InChI 1.03 XDXRDEHCMLKIGN-UHFFFAOYSA-N DW9 SMILES_CANONICAL CACTVS 3.385 Nc1sc2cc(SSc3cc(O)c4nc(N)sc4c3)cc(O)c2n1 DW9 SMILES CACTVS 3.385 Nc1sc2cc(SSc3cc(O)c4nc(N)sc4c3)cc(O)c2n1 DW9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1c(cc2c(c1O)nc(s2)N)SSc3cc(c4c(c3)sc(n4)N)O DW9 SMILES "OpenEye OEToolkits" 2.0.7 c1c(cc2c(c1O)nc(s2)N)SSc3cc(c4c(c3)sc(n4)N)O # _pdbx_chem_comp_identifier.comp_id DW9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier 2-azanyl-6-[(2-azanyl-4-oxidanyl-1,3-benzothiazol-6-yl)disulfanyl]-1,3-benzothiazol-4-ol # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site DW9 'Create component' 2019-09-13 PDBJ DW9 'Initial release' 2020-09-02 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal DW9 C1 C 7.260 -1.875 1 DW9 C2 C 7.260 -0.375 2 DW9 C3 C 8.559 0.375 3 DW9 C4 C 9.858 -0.375 4 DW9 C5 C 9.858 -1.875 5 DW9 C6 C 8.559 -2.625 6 DW9 C8 C 4.965 -1.125 7 DW9 C14 C 13.755 0.375 8 DW9 C15 C 13.755 1.875 9 DW9 C16 C 15.054 2.625 10 DW9 C17 C 16.353 1.875 11 DW9 C18 C 16.353 0.375 12 DW9 C19 C 15.054 -0.375 13 DW9 C21 C 18.648 1.125 14 DW9 N7 N 5.840 -2.332 15 DW9 N10 N 3.465 -1.125 16 DW9 N20 N 17.772 2.332 17 DW9 N24 N 20.148 1.125 18 DW9 O11 O 8.559 -4.125 19 DW9 O23 O 15.054 4.125 20 DW9 S9 S 5.840 0.082 21 DW9 S12 S 11.157 0.375 22 DW9 S13 S 12.456 -0.375 23 DW9 S22 S 17.772 -0.082 24 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal DW9 S22 C18 SINGLE NONE 1 DW9 S22 C21 SINGLE NONE 2 DW9 C19 C18 DOUBLE NONE 3 DW9 C19 C14 SINGLE NONE 4 DW9 N24 C21 SINGLE NONE 5 DW9 C18 C17 SINGLE NONE 6 DW9 C21 N20 DOUBLE NONE 7 DW9 S13 C14 SINGLE NONE 8 DW9 S13 S12 SINGLE NONE 9 DW9 C14 C15 DOUBLE NONE 10 DW9 C17 N20 SINGLE NONE 11 DW9 C17 C16 DOUBLE NONE 12 DW9 S12 C4 SINGLE NONE 13 DW9 C15 C16 SINGLE NONE 14 DW9 C16 O23 SINGLE NONE 15 DW9 C5 C4 SINGLE NONE 16 DW9 C5 C6 DOUBLE NONE 17 DW9 C4 C3 DOUBLE NONE 18 DW9 O11 C6 SINGLE NONE 19 DW9 C6 C1 SINGLE NONE 20 DW9 C3 C2 SINGLE NONE 21 DW9 C1 C2 DOUBLE NONE 22 DW9 C1 N7 SINGLE NONE 23 DW9 C2 S9 SINGLE NONE 24 DW9 N7 C8 DOUBLE NONE 25 DW9 S9 C8 SINGLE NONE 26 DW9 C8 N10 SINGLE NONE 27 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys DW9 MurckoScaffold S1 scaffold c1nc2ccc(SSc3ccc4ncsc4c3)cc2s1 InChI=1S/C14H8N2S4/c1-3-11-13(17-7-15-11)5-9(1)19-20-10-2-4-12-14(6-10)18-8-16-12/h1-8H ZVZQQAOWSVMARN-UHFFFAOYSA-N DW9 benzothiazole F1 fragment c1ccc2scnc2c1 InChI=1S/C7H5NS/c1-2-4-7-6(3-1)8-5-9-7/h1-5H IOJUPLGTWVMSFF-UHFFFAOYSA-N DW9 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N DW9 thiazole F3 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal DW9 C1 S1 1 DW9 C2 S1 1 DW9 C3 S1 1 DW9 C4 S1 1 DW9 C5 S1 1 DW9 C6 S1 1 DW9 C8 S1 1 DW9 C14 S1 1 DW9 C15 S1 1 DW9 C16 S1 1 DW9 C17 S1 1 DW9 C18 S1 1 DW9 C19 S1 1 DW9 C21 S1 1 DW9 N7 S1 1 DW9 N20 S1 1 DW9 S9 S1 1 DW9 S12 S1 1 DW9 S13 S1 1 DW9 S22 S1 1 DW9 C2 F1 1 DW9 S9 F1 1 DW9 C8 F1 1 DW9 N7 F1 1 DW9 C1 F1 1 DW9 C6 F1 1 DW9 C5 F1 1 DW9 C4 F1 1 DW9 C3 F1 1 DW9 C18 F1 2 DW9 S22 F1 2 DW9 C21 F1 2 DW9 N20 F1 2 DW9 C17 F1 2 DW9 C16 F1 2 DW9 C15 F1 2 DW9 C14 F1 2 DW9 C19 F1 2 DW9 C1 F2 1 DW9 C6 F2 1 DW9 C5 F2 1 DW9 C4 F2 1 DW9 C3 F2 1 DW9 C2 F2 1 DW9 C14 F2 2 DW9 C19 F2 2 DW9 C18 F2 2 DW9 C17 F2 2 DW9 C16 F2 2 DW9 C15 F2 2 DW9 C2 F3 1 DW9 C1 F3 1 DW9 N7 F3 1 DW9 C8 F3 1 DW9 S9 F3 1 DW9 C18 F3 2 DW9 C17 F3 2 DW9 N20 F3 2 DW9 C21 F3 2 DW9 S22 F3 2 # _pdbe_chem_comp_rdkit_properties.comp_id DW9 _pdbe_chem_comp_rdkit_properties.exactmw 393.969 _pdbe_chem_comp_rdkit_properties.amw 394.528 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 6 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 6 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7 _pdbe_chem_comp_rdkit_properties.NumHBD 4 _pdbe_chem_comp_rdkit_properties.NumHBA 10 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24 _pdbe_chem_comp_rdkit_properties.NumAtoms 34 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0 _pdbe_chem_comp_rdkit_properties.NumRings 4 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 4 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 165.942 _pdbe_chem_comp_rdkit_properties.tpsa 118.280 _pdbe_chem_comp_rdkit_properties.CrippenClogP 1.522 _pdbe_chem_comp_rdkit_properties.CrippenMR 96.968 _pdbe_chem_comp_rdkit_properties.chi0v 14.504 _pdbe_chem_comp_rdkit_properties.chi1v 9.924 _pdbe_chem_comp_rdkit_properties.chi2v 6.400 _pdbe_chem_comp_rdkit_properties.chi3v 6.400 _pdbe_chem_comp_rdkit_properties.chi4v 5.122 _pdbe_chem_comp_rdkit_properties.chi0n 21.238 _pdbe_chem_comp_rdkit_properties.chi1n 10.747 _pdbe_chem_comp_rdkit_properties.chi2n 2.778 _pdbe_chem_comp_rdkit_properties.chi3n 2.778 _pdbe_chem_comp_rdkit_properties.chi4n 1.855 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.880 _pdbe_chem_comp_rdkit_properties.kappa1 8.000 _pdbe_chem_comp_rdkit_properties.kappa2 5.884 _pdbe_chem_comp_rdkit_properties.kappa3 2.815 _pdbe_chem_comp_rdkit_properties.Phi 1.961 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id DW9 UniChem PDBe DW9 DW9 UniChem PubChem 138714094 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal DW9 C1 -3.422 -0.178 -0.077 ETKDGv3 1 DW9 C2 -2.306 0.016 0.622 ETKDGv3 2 DW9 C3 -1.265 -1.019 0.715 ETKDGv3 3 DW9 C4 -1.448 -2.178 0.059 ETKDGv3 4 DW9 C5 -2.701 -2.412 -0.711 ETKDGv3 5 DW9 C6 -3.648 -1.455 -0.781 ETKDGv3 6 DW9 C8 -3.894 1.929 0.596 ETKDGv3 7 DW9 C14 1.742 -1.678 -1.059 ETKDGv3 8 DW9 C15 2.931 -2.054 -0.539 ETKDGv3 9 DW9 C16 3.840 -1.045 0.072 ETKDGv3 10 DW9 C17 3.455 0.237 0.084 ETKDGv3 11 DW9 C18 2.178 0.631 -0.495 ETKDGv3 12 DW9 C19 1.346 -0.246 -1.054 ETKDGv3 13 DW9 C21 3.606 2.463 0.519 ETKDGv3 14 DW9 N7 -4.341 0.924 -0.092 ETKDGv3 15 DW9 N10 -4.624 3.145 0.733 ETKDGv3 16 DW9 N20 4.214 1.319 0.640 ETKDGv3 17 DW9 N24 4.175 3.677 1.001 ETKDGv3 18 DW9 O11 -4.823 -1.655 -1.503 ETKDGv3 19 DW9 O23 5.062 -1.421 0.622 ETKDGv3 20 DW9 S9 -2.293 1.640 1.342 ETKDGv3 21 DW9 S12 -0.186 -3.447 0.120 ETKDGv3 22 DW9 S13 0.638 -2.895 -1.772 ETKDGv3 23 DW9 S22 2.004 2.382 -0.300 ETKDGv3 24 DW9 H1 -0.366 -0.835 1.289 ETKDGv3 25 DW9 H2 -2.843 -3.356 -1.222 ETKDGv3 26 DW9 H3 3.222 -3.097 -0.550 ETKDGv3 27 DW9 H4 0.405 0.077 -1.480 ETKDGv3 28 DW9 H5 -4.230 3.932 1.294 ETKDGv3 29 DW9 H6 -5.555 3.259 0.274 ETKDGv3 30 DW9 H7 5.108 3.675 1.470 ETKDGv3 31 DW9 H8 3.660 4.578 0.888 ETKDGv3 32 DW9 H9 -5.004 -2.521 -1.996 ETKDGv3 33 DW9 H10 5.361 -2.389 0.618 ETKDGv3 34 #