data_E53
#
_chem_comp.id E53
_chem_comp.name Everolimus
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C53 H83 N O14"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
(1S,9R,12S,15R,16E,18R,19S,21R,23S,24Z,26Z,28Z,30R,32R,35S)-12-[(2S)-1-[(1S,3S,4R)-4-(2-hydroxyethyloxy)-3-methoxy-cyclohexyl]propan-2-yl]-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-1,18-bis(oxidanyl)-11,36-dioxa-4-azatricyclo[30.3.1.0^{4,9}]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-10-16
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 958.224
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code E53
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6L3A
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E53 O14 O1 O 0 1 N N N N N N -11.039 -31.177 34.548 -11.039 -31.177 34.548 O14 E53 1
E53 C52 C1 C 0 1 N N N N N N -11.160 -31.475 33.368 -11.160 -31.475 33.368 C52 E53 2
E53 C53 C2 C 0 1 N N N N N N -11.674 -32.862 32.965 -11.674 -32.862 32.965 C53 E53 3
E53 C13 C3 C 0 1 N N S N N N -10.924 -34.036 33.631 -10.924 -34.036 33.631 C13 E53 4
E53 C11 C4 C 0 1 N N S N N N -11.747 -35.359 33.685 -11.747 -35.359 33.685 C11 E53 5
E53 C12 C5 C 0 1 N N N N N N -12.016 -35.970 32.302 -12.016 -35.970 32.302 C12 E53 6
E53 C10 C6 C 0 1 N N N N N N -11.126 -36.395 34.651 -11.126 -36.395 34.651 C10 E53 7
E53 C6 C7 C 0 1 N N S N N N -12.084 -37.469 35.215 -12.084 -37.469 35.215 C6 E53 8
E53 C5 C8 C 0 1 N N N N N N -11.588 -38.897 34.939 -11.588 -38.897 34.939 C5 E53 9
E53 C4 C9 C 0 1 N N S N N N -12.218 -40.062 35.745 -12.218 -40.062 35.745 C4 E53 10
E53 O3 O2 O 0 1 N N N N N N -13.362 -40.606 35.065 -13.362 -40.606 35.065 O3 E53 11
E53 C9 C10 C 0 1 N N N N N N -13.060 -41.463 33.954 -13.060 -41.463 33.954 C9 E53 12
E53 C7 C11 C 0 1 N N N N N N -12.200 -37.291 36.721 -12.200 -37.291 36.721 C7 E53 13
E53 C8 C12 C 0 1 N N N N N N -13.169 -38.308 37.314 -13.169 -38.308 37.314 C8 E53 14
E53 C3 C13 C 0 1 N N R N N N -12.569 -39.707 37.203 -12.569 -39.707 37.203 C3 E53 15
E53 O2 O3 O 0 1 N N N N N N -13.465 -40.680 37.768 -13.465 -40.680 37.768 O2 E53 16
E53 C2 C14 C 0 1 N N N N N N -12.802 -41.822 38.317 -12.802 -41.822 38.317 C2 E53 17
E53 C1 C15 C 0 1 N N N N N N -13.626 -43.055 37.999 -13.626 -43.055 37.999 C1 E53 18
E53 O1 O4 O 0 1 N N N N N N -13.323 -43.408 36.648 -13.323 -43.408 36.648 O1 E53 19
E53 C50 C16 C 0 1 N N R N N N -10.793 -30.441 32.322 -10.793 -30.441 32.322 C50 E53 20
E53 C51 C17 C 0 1 N N N N N N -9.409 -29.847 32.637 -9.409 -29.847 32.637 C51 E53 21
E53 C49 C18 C 0 1 N N N N N N -11.733 -29.249 32.171 -11.733 -29.249 32.171 C49 E53 22
E53 C47 C19 C 0 1 N N N N N N -13.081 -29.165 32.387 -13.081 -29.165 32.387 C47 E53 23
E53 C48 C20 C 0 1 N N N N N N -13.908 -30.372 32.818 -13.908 -30.372 32.818 C48 E53 24
E53 C46 C21 C 0 1 N N R N N N -13.772 -27.805 32.116 -13.772 -27.805 32.116 C46 E53 25
E53 O13 O5 O 0 1 N N N N N N -14.976 -27.594 32.899 -14.976 -27.594 32.899 O13 E53 26
E53 C44 C22 C 0 1 N N S N N N -12.920 -26.517 32.292 -12.920 -26.517 32.292 C44 E53 27
E53 O12 O6 O 0 1 N N N N N N -13.785 -25.578 32.970 -13.785 -25.578 32.970 O12 E53 28
E53 C45 C23 C 0 1 N N N N N N -13.962 -25.739 34.374 -13.962 -25.739 34.374 C45 E53 29
E53 C43 C24 C 0 1 N N N N N N -12.418 -25.925 30.952 -12.418 -25.925 30.952 C43 E53 30
E53 O11 O7 O 0 1 N N N N N N -13.242 -25.397 30.226 -13.242 -25.397 30.226 O11 E53 31
E53 C41 C25 C 0 1 N N R N N N -10.979 -25.903 30.420 -10.979 -25.903 30.420 C41 E53 32
E53 C42 C26 C 0 1 N N N N N N -10.157 -24.980 31.325 -10.157 -24.980 31.325 C42 E53 33
E53 C40 C27 C 0 1 N N N N N N -10.839 -25.419 28.940 -10.839 -25.419 28.940 C40 E53 34
E53 C38 C28 C 0 1 N N S N N N -11.236 -26.356 27.761 -11.236 -26.356 27.761 C38 E53 35
E53 C39 C29 C 0 1 N N N N N N -12.001 -25.646 26.631 -12.001 -25.646 26.631 C39 E53 36
E53 C37 C30 C 0 1 N N N N N N -12.100 -27.494 28.255 -12.100 -27.494 28.255 C37 E53 37
E53 C36 C31 C 0 1 N N N N N N -11.780 -28.783 28.336 -11.780 -28.783 28.336 C36 E53 38
E53 C35 C32 C 0 1 N N N N N N -10.517 -29.411 27.940 -10.517 -29.411 27.940 C35 E53 39
E53 C34 C33 C 0 1 N N N N N N -10.366 -30.722 28.115 -10.366 -30.722 28.115 C34 E53 40
E53 C33 C34 C 0 1 N N N N N N -11.485 -31.490 28.669 -11.485 -31.490 28.669 C33 E53 41
E53 C31 C35 C 0 1 N N N N N N -11.526 -32.816 28.818 -11.526 -32.816 28.818 C31 E53 42
E53 C32 C36 C 0 1 N N N N N N -12.778 -33.434 29.378 -12.778 -33.434 29.378 C32 E53 43
E53 C29 C37 C 0 1 N N R N N N -10.405 -33.730 28.441 -10.405 -33.730 28.441 C29 E53 44
E53 O10 O8 O 0 1 N N N N N N -10.985 -34.718 27.584 -10.985 -34.718 27.584 O10 E53 45
E53 C30 C38 C 0 1 N N N N N N -11.075 -34.337 26.210 -11.075 -34.337 26.210 C30 E53 46
E53 C28 C39 C 0 1 N N N N N N -9.774 -34.351 29.688 -9.774 -34.351 29.688 C28 E53 47
E53 C23 C40 C 0 1 N N R N N N -9.646 -35.873 29.618 -9.646 -35.873 29.618 C23 E53 48
E53 O8 O9 O 0 1 N N N N N N -9.296 -36.328 30.931 -9.296 -36.328 30.931 O8 E53 49
E53 C24 C41 C 0 1 N N N N N N -8.589 -36.233 28.565 -8.589 -36.233 28.565 C24 E53 50
E53 C25 C42 C 0 1 N N N N N N -8.167 -37.687 28.652 -8.167 -37.687 28.652 C25 E53 51
E53 C26 C43 C 0 1 N N S N N N -7.759 -38.009 30.085 -7.759 -38.009 30.085 C26 E53 52
E53 C27 C44 C 0 1 N N N N N N -7.195 -39.430 30.207 -7.195 -39.430 30.207 C27 E53 53
E53 C22 C45 C 0 1 N N S N N N -8.928 -37.709 31.045 -8.928 -37.709 31.045 C22 E53 54
E53 O9 O10 O 0 1 N N N N N N -10.097 -38.474 30.708 -10.097 -38.474 30.708 O9 E53 55
E53 C21 C46 C 0 1 N N N N N N -8.519 -38.049 32.473 -8.519 -38.049 32.473 C21 E53 56
E53 O7 O11 O 0 1 N N N N N N -9.168 -38.892 33.070 -9.168 -38.892 33.070 O7 E53 57
E53 C20 C47 C 0 1 N N N N N N -7.348 -37.440 33.142 -7.348 -37.440 33.142 C20 E53 58
E53 O6 O12 O 0 1 N N N N N N -6.230 -37.885 32.896 -6.230 -37.885 32.896 O6 E53 59
E53 N N1 N 0 1 N N N N N N -7.506 -36.430 34.026 -7.506 -36.430 34.026 N E53 60
E53 C15 C48 C 0 1 N N R N N N -7.298 -35.023 33.629 -7.298 -35.023 33.629 C15 E53 61
E53 C14 C49 C 0 1 N N N N N N -8.485 -34.104 33.829 -8.485 -34.104 33.829 C14 E53 62
E53 O5 O13 O 0 1 N N N N N N -8.457 -33.253 34.696 -8.457 -33.253 34.696 O5 E53 63
E53 O4 O14 O 0 1 N N N N N N -9.663 -34.208 32.966 -9.663 -34.208 32.966 O4 E53 64
E53 C19 C50 C 0 1 N N N N N N -7.790 -36.577 35.447 -7.790 -36.577 35.447 C19 E53 65
E53 C18 C51 C 0 1 N N N N N N -6.421 -36.400 36.083 -6.421 -36.400 36.083 C18 E53 66
E53 C17 C52 C 0 1 N N N N N N -5.860 -35.007 35.810 -5.860 -35.007 35.810 C17 E53 67
E53 C16 C53 C 0 1 N N N N N N -6.046 -34.515 34.378 -6.046 -34.515 34.378 C16 E53 68
E53 H1 H1 H 0 1 N N N N N N -12.736 -32.930 33.243 -12.736 -32.930 33.243 H1 E53 69
E53 H2 H2 H 0 1 N N N N N N -11.573 -32.963 31.874 -11.573 -32.963 31.874 H2 E53 70
E53 H3 H3 H 0 1 N N N N N N -10.727 -33.741 34.672 -10.727 -33.742 34.672 H3 E53 71
E53 H4 H4 H 0 1 N N N N N N -12.728 -35.093 34.105 -12.728 -35.093 34.105 H4 E53 72
E53 H5 H5 H 0 1 N N N N N N -12.598 -36.896 32.417 -12.598 -36.896 32.417 H5 E53 73
E53 H6 H6 H 0 1 N N N N N N -12.583 -35.254 31.689 -12.583 -35.254 31.689 H6 E53 74
E53 H7 H7 H 0 1 N N N N N N -11.059 -36.197 31.809 -11.059 -36.197 31.809 H7 E53 75
E53 H8 H8 H 0 1 N N N N N N -10.321 -36.915 34.112 -10.321 -36.915 34.111 H8 E53 76
E53 H9 H9 H 0 1 N N N N N N -10.701 -35.845 35.503 -10.701 -35.845 35.503 H9 E53 77
E53 H10 H10 H 0 1 N N N N N N -13.076 -37.339 34.757 -13.076 -37.339 34.757 H10 E53 78
E53 H11 H11 H 0 1 N N N N N N -11.767 -39.104 33.874 -11.767 -39.104 33.874 H11 E53 79
E53 H12 H12 H 0 1 N N N N N N -10.506 -38.910 35.138 -10.506 -38.910 35.139 H12 E53 80
E53 H13 H13 H 0 1 N N N N N N -11.454 -40.852 35.794 -11.454 -40.852 35.794 H13 E53 81
E53 H14 H14 H 0 1 N N N N N N -13.996 -41.825 33.505 -13.996 -41.825 33.505 H14 E53 82
E53 H15 H15 H 0 1 N N N N N N -12.486 -40.901 33.203 -12.486 -40.901 33.203 H15 E53 83
E53 H16 H16 H 0 1 N N N N N N -12.465 -42.320 34.303 -12.465 -42.320 34.303 H16 E53 84
E53 H17 H17 H 0 1 N N N N N N -11.209 -37.429 37.178 -11.209 -37.429 37.178 H17 E53 85
E53 H18 H18 H 0 1 N N N N N N -12.566 -36.276 36.937 -12.566 -36.276 36.937 H18 E53 86
E53 H19 H19 H 0 1 N N N N N N -13.349 -38.069 38.373 -13.349 -38.069 38.373 H19 E53 87
E53 H20 H20 H 0 1 N N N N N N -14.121 -38.272 36.763 -14.120 -38.272 36.763 H20 E53 88
E53 H21 H21 H 0 1 N N N N N N -11.632 -39.714 37.779 -11.632 -39.714 37.779 H21 E53 89
E53 H22 H22 H 0 1 N N N N N N -11.801 -41.920 37.872 -11.801 -41.920 37.872 H22 E53 90
E53 H23 H23 H 0 1 N N N N N N -12.709 -41.709 39.407 -12.709 -41.709 39.407 H23 E53 91
E53 H24 H24 H 0 1 N N N N N N -14.698 -42.833 38.102 -14.698 -42.833 38.102 H24 E53 92
E53 H25 H25 H 0 1 N N N N N N -13.355 -43.878 38.677 -13.355 -43.878 38.677 H25 E53 93
E53 H26 H26 H 0 1 N N N N N N -13.819 -44.180 36.403 -13.819 -44.180 36.403 H26 E53 94
E53 H27 H27 H 0 1 N N N N N N -10.728 -30.948 31.348 -10.728 -30.948 31.348 H27 E53 95
E53 H28 H28 H 0 1 N N N N N N -8.679 -30.661 32.759 -8.679 -30.661 32.759 H28 E53 96
E53 H29 H29 H 0 1 N N N N N N -9.094 -29.193 31.811 -9.094 -29.193 31.811 H29 E53 97
E53 H30 H30 H 0 1 N N N N N N -9.464 -29.262 33.567 -9.464 -29.262 33.567 H30 E53 98
E53 H31 H31 H 0 1 N N N N N N -11.263 -28.333 31.844 -11.263 -28.333 31.844 H31 E53 99
E53 H32 H32 H 0 1 N N N N N N -13.246 -31.239 32.961 -13.246 -31.239 32.961 H32 E53 100
E53 H33 H33 H 0 1 N N N N N N -14.424 -30.145 33.763 -14.424 -30.145 33.763 H33 E53 101
E53 H34 H34 H 0 1 N N N N N N -14.651 -30.603 32.041 -14.651 -30.603 32.041 H34 E53 102
E53 H35 H35 H 0 1 N N N N N N -14.074 -27.825 31.058 -14.074 -27.825 31.058 H35 E53 103
E53 H36 H36 H 0 1 N N N N N N -15.538 -28.356 32.827 -15.538 -28.356 32.827 H36 E53 104
E53 H37 H37 H 0 1 N N N N N N -12.050 -26.754 32.922 -12.050 -26.753 32.922 H37 E53 105
E53 H38 H38 H 0 1 N N N N N N -14.640 -24.959 34.750 -14.640 -24.959 34.750 H38 E53 106
E53 H39 H39 H 0 1 N N N N N N -14.394 -26.730 34.578 -14.394 -26.730 34.578 H39 E53 107
E53 H40 H40 H 0 1 N N N N N N -12.988 -25.652 34.878 -12.988 -25.653 34.879 H40 E53 108
E53 H41 H41 H 0 1 N N N N N N -10.565 -26.920 30.489 -10.565 -26.920 30.489 H41 E53 109
E53 H42 H42 H 0 1 N N N N N N -10.249 -25.313 32.369 -10.249 -25.313 32.369 H42 E53 110
E53 H43 H43 H 0 1 N N N N N N -9.100 -25.015 31.021 -9.100 -25.015 31.021 H43 E53 111
E53 H44 H44 H 0 1 N N N N N N -10.531 -23.950 31.234 -10.531 -23.949 31.234 H44 E53 112
E53 H45 H45 H 0 1 N N N N N N -9.781 -25.158 28.793 -9.781 -25.158 28.792 H45 E53 113
E53 H46 H46 H 0 1 N N N N N N -11.457 -24.514 28.845 -11.457 -24.514 28.845 H46 E53 114
E53 H47 H47 H 0 1 N N N N N N -10.312 -26.778 27.338 -10.312 -26.778 27.338 H47 E53 115
E53 H48 H48 H 0 1 N N N N N N -11.398 -24.810 26.248 -11.398 -24.810 26.248 H48 E53 116
E53 H49 H49 H 0 1 N N N N N N -12.197 -26.359 25.817 -12.197 -26.359 25.817 H49 E53 117
E53 H50 H50 H 0 1 N N N N N N -12.955 -25.261 27.020 -12.955 -25.261 27.020 H50 E53 118
E53 H51 H51 H 0 1 N N N N N N -13.095 -27.229 28.581 -13.095 -27.229 28.581 H51 E53 119
E53 H52 H52 H 0 1 N N N N N N -12.536 -29.440 28.739 -12.536 -29.440 28.739 H52 E53 120
E53 H53 H53 H 0 1 N N N N N N -9.721 -28.820 27.513 -9.721 -28.819 27.513 H53 E53 121
E53 H54 H54 H 0 1 N N N N N N -9.438 -31.210 27.854 -9.438 -31.210 27.854 H54 E53 122
E53 H55 H55 H 0 1 N N N N N N -12.355 -30.933 28.985 -12.355 -30.933 28.985 H55 E53 123
E53 H56 H56 H 0 1 N N N N N N -13.507 -32.643 29.607 -13.507 -32.643 29.607 H56 E53 124
E53 H57 H57 H 0 1 N N N N N N -13.208 -34.126 28.639 -13.208 -34.126 28.639 H57 E53 125
E53 H58 H58 H 0 1 N N N N N N -12.535 -33.985 30.298 -12.535 -33.985 30.298 H58 E53 126
E53 H59 H59 H 0 1 N N N N N N -9.636 -33.160 27.899 -9.636 -33.160 27.899 H59 E53 127
E53 H60 H60 H 0 1 N N N N N N -11.531 -35.154 25.631 -11.531 -35.154 25.632 H60 E53 128
E53 H61 H61 H 0 1 N N N N N N -11.696 -33.434 26.120 -11.696 -33.433 26.120 H61 E53 129
E53 H62 H62 H 0 1 N N N N N N -10.067 -34.130 25.820 -10.067 -34.130 25.820 H62 E53 130
E53 H63 H63 H 0 1 N N N N N N -8.769 -33.923 29.818 -8.769 -33.923 29.818 H63 E53 131
E53 H64 H64 H 0 1 N N N N N N -10.397 -34.094 30.557 -10.397 -34.094 30.557 H64 E53 132
E53 H65 H65 H 0 1 N N N N N N -10.613 -36.299 29.312 -10.613 -36.299 29.312 H65 E53 133
E53 H66 H66 H 0 1 N N N N N N -7.705 -35.597 28.719 -7.705 -35.597 28.719 H66 E53 134
E53 H67 H67 H 0 1 N N N N N N -9.006 -36.044 27.565 -9.006 -36.044 27.565 H67 E53 135
E53 H68 H68 H 0 1 N N N N N N -9.008 -38.332 28.356 -9.007 -38.332 28.356 H68 E53 136
E53 H69 H69 H 0 1 N N N N N N -7.315 -37.863 27.979 -7.315 -37.863 27.979 H69 E53 137
E53 H70 H70 H 0 1 N N N N N N -6.945 -37.318 30.350 -6.945 -37.318 30.350 H70 E53 138
E53 H71 H71 H 0 1 N N N N N N -6.913 -39.625 31.252 -6.913 -39.625 31.252 H71 E53 139
E53 H72 H72 H 0 1 N N N N N N -7.959 -40.156 29.893 -7.959 -40.156 29.892 H72 E53 140
E53 H73 H73 H 0 1 N N N N N N -6.308 -39.529 29.563 -6.308 -39.529 29.563 H73 E53 141
E53 H74 H74 H 0 1 N N N N N N -10.338 -39.026 31.443 -10.338 -39.026 31.443 H74 E53 142
E53 H75 H75 H 0 1 N N N N N N -7.055 -35.011 32.556 -7.055 -35.011 32.556 H75 E53 143
E53 H76 H76 H 0 1 N N N N N N -8.491 -35.803 35.793 -8.491 -35.803 35.793 H76 E53 144
E53 H77 H77 H 0 1 N N N N N N -8.204 -37.572 35.668 -8.204 -37.572 35.668 H77 E53 145
E53 H78 H78 H 0 1 N N N N N N -6.509 -36.544 37.170 -6.509 -36.544 37.170 H78 E53 146
E53 H79 H79 H 0 1 N N N N N N -5.733 -37.151 35.668 -5.733 -37.151 35.668 H79 E53 147
E53 H80 H80 H 0 1 N N N N N N -4.782 -35.022 36.030 -4.782 -35.022 36.030 H80 E53 148
E53 H81 H81 H 0 1 N N N N N N -6.362 -34.297 36.484 -6.362 -34.297 36.484 H81 E53 149
E53 H82 H82 H 0 1 N N N N N N -5.163 -34.826 33.801 -5.163 -34.826 33.801 H82 E53 150
E53 H83 H83 H 0 1 N N N N N N -6.097 -33.417 34.407 -6.097 -33.417 34.407 H83 E53 151
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E53 C30 O10 SING N N 1
E53 C39 C38 SING N N 2
E53 O10 C29 SING N N 3
E53 C38 C37 SING N N 4
E53 C38 C40 SING N N 5
E53 C35 C34 DOUB N Z 6
E53 C35 C36 SING N N 7
E53 C34 C33 SING N N 8
E53 C37 C36 DOUB N Z 9
E53 C29 C31 SING N N 10
E53 C29 C28 SING N N 11
E53 C24 C25 SING N N 12
E53 C24 C23 SING N N 13
E53 C25 C26 SING N N 14
E53 C33 C31 DOUB N Z 15
E53 C31 C32 SING N N 16
E53 C40 C41 SING N N 17
E53 C23 C28 SING N N 18
E53 C23 O8 SING N N 19
E53 C26 C27 SING N N 20
E53 C26 C22 SING N N 21
E53 O11 C43 DOUB N N 22
E53 C41 C43 SING N N 23
E53 C41 C42 SING N N 24
E53 O9 C22 SING N N 25
E53 O8 C22 SING N N 26
E53 C43 C44 SING N N 27
E53 C22 C21 SING N N 28
E53 C46 C44 SING N N 29
E53 C46 C47 SING N N 30
E53 C46 O13 SING N N 31
E53 C49 C50 SING N N 32
E53 C49 C47 DOUB N E 33
E53 C44 O12 SING N N 34
E53 C12 C11 SING N N 35
E53 C50 C51 SING N N 36
E53 C50 C52 SING N N 37
E53 C47 C48 SING N N 38
E53 C21 O7 DOUB N N 39
E53 C21 C20 SING N N 40
E53 O6 C20 DOUB N N 41
E53 C53 C52 SING N N 42
E53 C53 C13 SING N N 43
E53 O4 C13 SING N N 44
E53 O4 C14 SING N N 45
E53 O12 C45 SING N N 46
E53 C20 N SING N N 47
E53 C52 O14 DOUB N N 48
E53 C15 C14 SING N N 49
E53 C15 N SING N N 50
E53 C15 C16 SING N N 51
E53 C13 C11 SING N N 52
E53 C11 C10 SING N N 53
E53 C14 O5 DOUB N N 54
E53 C9 O3 SING N N 55
E53 N C19 SING N N 56
E53 C16 C17 SING N N 57
E53 C10 C6 SING N N 58
E53 C5 C6 SING N N 59
E53 C5 C4 SING N N 60
E53 O3 C4 SING N N 61
E53 C6 C7 SING N N 62
E53 C19 C18 SING N N 63
E53 C4 C3 SING N N 64
E53 C17 C18 SING N N 65
E53 O1 C1 SING N N 66
E53 C7 C8 SING N N 67
E53 C3 C8 SING N N 68
E53 C3 O2 SING N N 69
E53 O2 C2 SING N N 70
E53 C1 C2 SING N N 71
E53 C53 H1 SING N N 72
E53 C53 H2 SING N N 73
E53 C13 H3 SING N N 74
E53 C11 H4 SING N N 75
E53 C12 H5 SING N N 76
E53 C12 H6 SING N N 77
E53 C12 H7 SING N N 78
E53 C10 H8 SING N N 79
E53 C10 H9 SING N N 80
E53 C6 H10 SING N N 81
E53 C5 H11 SING N N 82
E53 C5 H12 SING N N 83
E53 C4 H13 SING N N 84
E53 C9 H14 SING N N 85
E53 C9 H15 SING N N 86
E53 C9 H16 SING N N 87
E53 C7 H17 SING N N 88
E53 C7 H18 SING N N 89
E53 C8 H19 SING N N 90
E53 C8 H20 SING N N 91
E53 C3 H21 SING N N 92
E53 C2 H22 SING N N 93
E53 C2 H23 SING N N 94
E53 C1 H24 SING N N 95
E53 C1 H25 SING N N 96
E53 O1 H26 SING N N 97
E53 C50 H27 SING N N 98
E53 C51 H28 SING N N 99
E53 C51 H29 SING N N 100
E53 C51 H30 SING N N 101
E53 C49 H31 SING N N 102
E53 C48 H32 SING N N 103
E53 C48 H33 SING N N 104
E53 C48 H34 SING N N 105
E53 C46 H35 SING N N 106
E53 O13 H36 SING N N 107
E53 C44 H37 SING N N 108
E53 C45 H38 SING N N 109
E53 C45 H39 SING N N 110
E53 C45 H40 SING N N 111
E53 C41 H41 SING N N 112
E53 C42 H42 SING N N 113
E53 C42 H43 SING N N 114
E53 C42 H44 SING N N 115
E53 C40 H45 SING N N 116
E53 C40 H46 SING N N 117
E53 C38 H47 SING N N 118
E53 C39 H48 SING N N 119
E53 C39 H49 SING N N 120
E53 C39 H50 SING N N 121
E53 C37 H51 SING N N 122
E53 C36 H52 SING N N 123
E53 C35 H53 SING N N 124
E53 C34 H54 SING N N 125
E53 C33 H55 SING N N 126
E53 C32 H56 SING N N 127
E53 C32 H57 SING N N 128
E53 C32 H58 SING N N 129
E53 C29 H59 SING N N 130
E53 C30 H60 SING N N 131
E53 C30 H61 SING N N 132
E53 C30 H62 SING N N 133
E53 C28 H63 SING N N 134
E53 C28 H64 SING N N 135
E53 C23 H65 SING N N 136
E53 C24 H66 SING N N 137
E53 C24 H67 SING N N 138
E53 C25 H68 SING N N 139
E53 C25 H69 SING N N 140
E53 C26 H70 SING N N 141
E53 C27 H71 SING N N 142
E53 C27 H72 SING N N 143
E53 C27 H73 SING N N 144
E53 O9 H74 SING N N 145
E53 C15 H75 SING N N 146
E53 C19 H76 SING N N 147
E53 C19 H77 SING N N 148
E53 C18 H78 SING N N 149
E53 C18 H79 SING N N 150
E53 C17 H80 SING N N 151
E53 C17 H81 SING N N 152
E53 C16 H82 SING N N 153
E53 C16 H83 SING N N 154
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E53 InChI InChI 1.03 InChI=1S/C53H83NO14/c1-32-16-12-11-13-17-33(2)44(63-8)30-40-21-19-38(7)53(62,68-40)50(59)51(60)54-23-15-14-18-41(54)52(61)67-45(35(4)28-39-20-22-43(66-25-24-55)46(29-39)64-9)31-42(56)34(3)27-37(6)48(58)49(65-10)47(57)36(5)26-32/h11-13,16-17,27,32,34-36,38-41,43-46,48-49,55,58,62H,14-15,18-26,28-31H2,1-10H3/b13-11-,16-12-,33-17-,37-27+/t32-,34-,35+,36-,38+,39+,40-,41-,43-,44-,45+,46+,48-,49-,53+/m1/s1
E53 InChIKey InChI 1.03 HKVAMNSJSFKALM-PGYDAPRHSA-N
E53 SMILES_CANONICAL CACTVS 3.385 CO[C@H]1C[C@@H](CC[C@H]1OCCO)C[C@H](C)[C@@H]2CC(=O)[C@H](C)\C=C(/C)[C@@H](O)[C@H](OC)C(=O)[C@H](C)C[C@H](C)\C=C/C=C\C=C(\C)[C@@H](C[C@H]3CC[C@H](C)[C@](O)(O3)C(=O)C(=O)N4CCCC[C@@H]4C(=O)O2)OC
E53 SMILES CACTVS 3.385 CO[CH]1C[CH](CC[CH]1OCCO)C[CH](C)[CH]2CC(=O)[CH](C)C=C(C)[CH](O)[CH](OC)C(=O)[CH](C)C[CH](C)C=CC=CC=C(C)[CH](C[CH]3CC[CH](C)[C](O)(O3)C(=O)C(=O)N4CCCC[CH]4C(=O)O2)OC
E53 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 C[C@H]1CC[C@@H]2C[C@H](/C(=C\C=C/C=C\[C@H](C[C@H](C(=O)[C@H]([C@@H](/C(=C/[C@H](C(=O)C[C@H](OC(=O)[C@H]3CCCCN3C(=O)C(=O)[C@]1(O2)O)[C@@H](C)C[C@@H]4CC[C@H]([C@H](C4)OC)OCCO)C)/C)O)OC)C)C)/C)OC
E53 SMILES "OpenEye OEToolkits" 2.0.7 CC1CCC2CC(C(=CC=CC=CC(CC(C(=O)C(C(C(=CC(C(=O)CC(OC(=O)C3CCCCN3C(=O)C(=O)C1(O2)O)C(C)CC4CCC(C(C4)OC)OCCO)C)C)O)OC)C)C)C)OC
#
_pdbx_chem_comp_identifier.comp_id E53
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(1~{S},9~{R},12~{S},15~{R},16~{E},18~{R},19~{S},21~{R},23~{S},24~{Z},26~{Z},28~{Z},30~{R},32~{R},35~{S})-12-[(2~{S})-1-[(1~{S},3~{S},4~{R})-4-(2-hydroxyethyloxy)-3-methoxy-cyclohexyl]propan-2-yl]-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-1,18-bis(oxidanyl)-11,36-dioxa-4-azatricyclo[30.3.1.0^{4,9}]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E53 'Create component' 2019-10-16 PDBJ
E53 'Initial release' 2020-09-16 RCSB
E53 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id E53
_pdbx_chem_comp_synonyms.name
(1S,9R,12S,15R,16E,18R,19S,21R,23S,24Z,26Z,28Z,30R,32R,35S)-12-[(2S)-1-[(1S,3S,4R)-4-(2-hydroxyethyloxy)-3-methoxy-cyclohexyl]propan-2-yl]-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-1,18-bis(oxidanyl)-11,36-dioxa-4-azatricyclo[30.3.1.0^{4,9}]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id E53
_pdbe_chem_comp_synonyms.name
'(1S,9R,12S,15R,16E,18R,19S,21R,23S,24Z,26Z,28Z,30R,32R,35S)-12-[(2S)-1-[(1S,3S,4R)-4-(2-hydroxyethyloxy)-3-methoxy-cyclohexyl]propan-2-yl]-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-1,18-bis(oxidanyl)-11,36-dioxa-4-azatricyclo[30.3.1.0^{4,9}]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
E53 O14 O 12.781 1.222 1
E53 C52 C 14.262 0.983 2
E53 C53 C 14.198 -0.230 3
E53 C13 C 14.394 -1.428 4
E53 C11 C 12.948 -1.827 5
E53 C12 C 12.571 -3.279 6
E53 C10 C 11.879 -0.775 7
E53 C6 C 10.434 -1.175 8
E53 C5 C 9.365 -0.122 9
E53 C4 C 7.919 -0.521 10
E53 O3 O 6.850 0.531 11
E53 C9 C 5.404 0.131 12
E53 C7 C 10.057 -2.626 13
E53 C8 C 8.611 -3.026 14
E53 C3 C 7.542 -1.973 15
E53 O2 O 6.096 -2.373 16
E53 C2 C 5.719 -3.825 17
E53 C1 C 4.273 -4.224 18
E53 O1 O 3.896 -5.676 19
E53 C50 C 14.583 2.153 20
E53 C51 C 13.188 2.703 21
E53 C49 C 15.147 3.229 22
E53 C47 C 15.927 4.159 23
E53 C48 C 14.887 5.240 24
E53 C46 C 16.887 4.902 25
E53 O13 O 16.102 6.180 26
E53 C44 C 17.983 5.423 27
E53 O12 O 17.489 6.839 28
E53 C45 C 18.468 7.976 29
E53 C43 C 19.166 5.698 30
E53 O11 O 18.985 7.187 31
E53 C41 C 20.380 5.715 32
E53 C42 C 20.520 7.208 33
E53 C40 C 21.569 5.472 34
E53 C38 C 22.680 4.981 35
E53 C39 C 23.430 6.280 36
E53 C37 C 23.660 4.265 37
E53 C36 C 24.465 3.356 38
E53 C35 C 25.057 2.296 39
E53 C34 C 25.410 1.135 40
E53 C33 C 25.508 -0.075 41
E53 C31 C 25.345 -1.278 42
E53 C32 C 26.801 -1.638 43
E53 C29 C 24.928 -2.419 44
E53 O10 O 26.274 -3.081 45
E53 C30 C 26.374 -4.577 46
E53 C28 C 24.279 -3.444 47
E53 C23 C 23.425 -4.308 48
E53 O8 O 22.408 -4.970 49
E53 C24 C 24.147 -5.596 50
E53 C25 C 23.357 -6.844 51
E53 C26 C 21.884 -6.742 52
E53 C27 C 21.030 -7.976 53
E53 C22 C 21.272 -5.399 54
E53 O9 O 20.650 -4.034 55
E53 C21 C 20.071 -5.576 56
E53 O7 O 20.130 -7.075 57
E53 C20 C 18.860 -5.493 58
E53 O6 O 18.598 -6.970 59
E53 N N 17.694 -5.154 60
E53 C15 C 16.395 -4.404 61
E53 C14 C 15.519 -3.564 62
E53 O5 O 14.371 -4.530 63
E53 O4 O 14.841 -2.557 64
E53 C19 C 18.993 -4.404 65
E53 C18 C 18.993 -2.904 66
E53 C17 C 17.694 -2.154 67
E53 C16 C 16.395 -2.904 68
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
E53 C30 O10 SINGLE NONE 1
E53 C38 C39 SINGLE BEGINDASH 2
E53 C29 O10 SINGLE BEGINDASH 3
E53 C38 C37 SINGLE ENDDOWNRIGHT 4
E53 C38 C40 SINGLE NONE 5
E53 C35 C34 DOUBLE NONE 6
E53 C35 C36 SINGLE ENDDOWNRIGHT 7
E53 C34 C33 SINGLE ENDDOWNRIGHT 8
E53 C37 C36 DOUBLE NONE 9
E53 C29 C31 SINGLE ENDDOWNRIGHT 10
E53 C29 C28 SINGLE NONE 11
E53 C24 C25 SINGLE NONE 12
E53 C24 C23 SINGLE NONE 13
E53 C25 C26 SINGLE NONE 14
E53 C33 C31 DOUBLE NONE 15
E53 C31 C32 SINGLE ENDDOWNRIGHT 16
E53 C40 C41 SINGLE NONE 17
E53 C23 C28 SINGLE NONE 18
E53 C23 O8 SINGLE NONE 19
E53 C26 C27 SINGLE BEGINDASH 20
E53 C26 C22 SINGLE NONE 21
E53 O11 C43 DOUBLE NONE 22
E53 C41 C43 SINGLE NONE 23
E53 C41 C42 SINGLE BEGINDASH 24
E53 C22 O9 SINGLE BEGINDASH 25
E53 O8 C22 SINGLE NONE 26
E53 C43 C44 SINGLE NONE 27
E53 C22 C21 SINGLE NONE 28
E53 C46 C44 SINGLE NONE 29
E53 C46 C47 SINGLE ENDDOWNRIGHT 30
E53 C46 O13 SINGLE BEGINWEDGE 31
E53 C49 C50 SINGLE ENDDOWNRIGHT 32
E53 C49 C47 DOUBLE NONE 33
E53 C44 O12 SINGLE BEGINDASH 34
E53 C11 C12 SINGLE BEGINWEDGE 35
E53 C50 C51 SINGLE BEGINDASH 36
E53 C50 C52 SINGLE NONE 37
E53 C47 C48 SINGLE ENDDOWNRIGHT 38
E53 C21 O7 DOUBLE NONE 39
E53 C21 C20 SINGLE NONE 40
E53 O6 C20 DOUBLE NONE 41
E53 C53 C52 SINGLE NONE 42
E53 C13 C53 SINGLE BEGINDASH 43
E53 O4 C13 SINGLE NONE 44
E53 O4 C14 SINGLE NONE 45
E53 O12 C45 SINGLE NONE 46
E53 C20 N SINGLE NONE 47
E53 C52 O14 DOUBLE NONE 48
E53 C15 C14 SINGLE NONE 49
E53 C15 N SINGLE NONE 50
E53 C15 C16 SINGLE NONE 51
E53 C13 C11 SINGLE NONE 52
E53 C11 C10 SINGLE NONE 53
E53 C14 O5 DOUBLE NONE 54
E53 C9 O3 SINGLE NONE 55
E53 N C19 SINGLE NONE 56
E53 C16 C17 SINGLE NONE 57
E53 C6 C10 SINGLE BEGINDASH 58
E53 C5 C6 SINGLE NONE 59
E53 C5 C4 SINGLE NONE 60
E53 C4 O3 SINGLE BEGINWEDGE 61
E53 C6 C7 SINGLE NONE 62
E53 C19 C18 SINGLE NONE 63
E53 C4 C3 SINGLE NONE 64
E53 C17 C18 SINGLE NONE 65
E53 O1 C1 SINGLE NONE 66
E53 C7 C8 SINGLE NONE 67
E53 C3 C8 SINGLE NONE 68
E53 C3 O2 SINGLE BEGINWEDGE 69
E53 O2 C2 SINGLE NONE 70
E53 C1 C2 SINGLE NONE 71
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
E53 MurckoScaffold S1 scaffold 'O=C1CC/C=C/CC(=O)C[C@@H](CCC2CCCCC2)OC(=O)[C@H]2CCCCN2C(=O)C(=O)C2CCC[C@H](CC/C=C\C=C/C=C\CCC1)O2' InChI=1S/C41H59NO7/c43-33-21-12-6-4-2-1-3-5-7-15-24-35-25-18-27-38(48-35)39(45)40(46)42-30-17-16-26-37(42)41(47)49-36(29-28-32-19-10-8-11-20-32)31-34(44)23-14-9-13-22-33/h1-5,7,9,14,32,35-38H,6,8,10-13,15-31H2/b3-1-,4-2-,7-5-,14-9+/t35-,36+,37+,38?/m0/s1 HBUPNPNMLZLHHB-NXFDVVAESA-N
E53 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
E53 cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
E53 peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
E53 pyranose F4 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
E53 O14 S1 1
E53 C52 S1 1
E53 C53 S1 1
E53 C13 S1 1
E53 C11 S1 1
E53 C10 S1 1
E53 C6 S1 1
E53 C5 S1 1
E53 C4 S1 1
E53 C7 S1 1
E53 C8 S1 1
E53 C3 S1 1
E53 C50 S1 1
E53 C49 S1 1
E53 C47 S1 1
E53 C46 S1 1
E53 C44 S1 1
E53 C43 S1 1
E53 O11 S1 1
E53 C41 S1 1
E53 C40 S1 1
E53 C38 S1 1
E53 C37 S1 1
E53 C36 S1 1
E53 C35 S1 1
E53 C34 S1 1
E53 C33 S1 1
E53 C31 S1 1
E53 C29 S1 1
E53 C28 S1 1
E53 C23 S1 1
E53 O8 S1 1
E53 C24 S1 1
E53 C25 S1 1
E53 C26 S1 1
E53 C22 S1 1
E53 C21 S1 1
E53 O7 S1 1
E53 C20 S1 1
E53 O6 S1 1
E53 N S1 1
E53 C15 S1 1
E53 C14 S1 1
E53 O5 S1 1
E53 O4 S1 1
E53 C19 S1 1
E53 C18 S1 1
E53 C17 S1 1
E53 C16 S1 1
E53 N F1 1
E53 C20 F1 1
E53 O6 F1 1
E53 C21 F1 1
E53 C6 F2 1
E53 C5 F2 1
E53 C4 F2 1
E53 C3 F2 1
E53 C8 F2 1
E53 C7 F2 1
E53 O7 F3 1
E53 C21 F3 1
E53 C20 F3 1
E53 N F3 1
E53 O5 F3 2
E53 C14 F3 2
E53 C15 F3 2
E53 N F3 2
E53 C24 F4 1
E53 C23 F4 1
E53 O8 F4 1
E53 C22 F4 1
E53 C26 F4 1
E53 C25 F4 1
E53 O9 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id E53
_pdbe_chem_comp_rdkit_properties.exactmw 957.581
_pdbe_chem_comp_rdkit_properties.amw 958.240
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 15
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 22
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 14
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 68
_pdbe_chem_comp_rdkit_properties.NumAtoms 151
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 15
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.755
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 3
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 15
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 521.438
_pdbe_chem_comp_rdkit_properties.tpsa 204.660
_pdbe_chem_comp_rdkit_properties.CrippenClogP 6.197
_pdbe_chem_comp_rdkit_properties.CrippenMR 255.956
_pdbe_chem_comp_rdkit_properties.chi0v 32.663
_pdbe_chem_comp_rdkit_properties.chi1v 16.753
_pdbe_chem_comp_rdkit_properties.chi2v 7.094
_pdbe_chem_comp_rdkit_properties.chi3v 7.094
_pdbe_chem_comp_rdkit_properties.chi4v 4.137
_pdbe_chem_comp_rdkit_properties.chi0n 115.663
_pdbe_chem_comp_rdkit_properties.chi1n 57.978
_pdbe_chem_comp_rdkit_properties.chi2n 7.094
_pdbe_chem_comp_rdkit_properties.chi3n 7.094
_pdbe_chem_comp_rdkit_properties.chi4n 4.137
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.410
_pdbe_chem_comp_rdkit_properties.kappa1 11.517
_pdbe_chem_comp_rdkit_properties.kappa2 27.263
_pdbe_chem_comp_rdkit_properties.kappa3 15.295
_pdbe_chem_comp_rdkit_properties.Phi 4.618
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
E53 UniChem PDBe E53
E53 UniChem PubChem 154585526
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
E53 O14 0.478 -1.373 1.753 ETKDGv3 1
E53 C52 1.575 -1.912 1.713 ETKDGv3 2
E53 C53 2.802 -1.034 1.522 ETKDGv3 3
E53 C13 2.610 0.110 0.486 ETKDGv3 4
E53 C11 2.454 -0.401 -0.974 ETKDGv3 5
E53 C12 2.138 0.754 -1.940 ETKDGv3 6
E53 C10 3.630 -1.282 -1.490 ETKDGv3 7
E53 C6 5.072 -0.751 -1.265 ETKDGv3 8
E53 C5 6.094 -1.858 -1.594 ETKDGv3 9
E53 C4 7.552 -1.439 -1.265 ETKDGv3 10
E53 O3 7.887 -1.862 0.050 ETKDGv3 11
E53 C9 8.587 -3.087 0.022 ETKDGv3 12
E53 C7 5.373 0.529 -2.089 ETKDGv3 13
E53 C8 6.863 0.697 -2.450 ETKDGv3 14
E53 C3 7.784 0.092 -1.377 ETKDGv3 15
E53 O2 7.525 0.712 -0.124 ETKDGv3 16
E53 C2 8.401 1.795 0.120 ETKDGv3 17
E53 C1 9.636 1.315 0.885 ETKDGv3 18
E53 O1 10.486 2.394 1.163 ETKDGv3 19
E53 C50 1.652 -3.386 2.090 ETKDGv3 20
E53 C51 2.945 -4.110 1.687 ETKDGv3 21
E53 C49 0.388 -4.124 1.666 ETKDGv3 22
E53 C47 -0.001 -4.408 0.395 ETKDGv3 23
E53 C48 0.936 -4.281 -0.779 ETKDGv3 24
E53 C46 -1.432 -4.866 0.139 ETKDGv3 25
E53 O13 -1.712 -5.967 0.967 ETKDGv3 26
E53 C44 -2.443 -3.721 0.405 ETKDGv3 27
E53 O12 -3.768 -4.214 0.262 ETKDGv3 28
E53 C45 -4.441 -4.229 1.501 ETKDGv3 29
E53 C43 -2.230 -2.578 -0.571 ETKDGv3 30
E53 O11 -1.484 -1.662 -0.256 ETKDGv3 31
E53 C41 -2.923 -2.530 -1.922 ETKDGv3 32
E53 C42 -1.879 -2.404 -3.041 ETKDGv3 33
E53 C40 -3.941 -1.355 -1.965 ETKDGv3 34
E53 C38 -5.343 -1.771 -2.475 ETKDGv3 35
E53 C39 -5.322 -2.059 -3.982 ETKDGv3 36
E53 C37 -6.353 -0.681 -2.175 ETKDGv3 37
E53 C36 -6.839 -0.411 -0.954 ETKDGv3 38
E53 C35 -6.477 -1.173 0.263 ETKDGv3 39
E53 C34 -6.693 -0.727 1.506 ETKDGv3 40
E53 C33 -7.286 0.585 1.830 ETKDGv3 41
E53 C31 -6.676 1.774 1.646 ETKDGv3 42
E53 C32 -7.387 3.007 2.139 ETKDGv3 43
E53 C29 -5.284 1.915 1.036 ETKDGv3 44
E53 O10 -4.422 2.545 1.969 ETKDGv3 45
E53 C30 -3.835 1.590 2.825 ETKDGv3 46
E53 C28 -5.357 2.785 -0.236 ETKDGv3 47
E53 C23 -4.095 2.672 -1.110 ETKDGv3 48
E53 O8 -2.964 3.066 -0.351 ETKDGv3 49
E53 C24 -4.250 3.570 -2.345 ETKDGv3 50
E53 C25 -3.005 3.475 -3.215 ETKDGv3 51
E53 C26 -1.737 3.748 -2.385 ETKDGv3 52
E53 C27 -0.495 3.523 -3.270 ETKDGv3 53
E53 C22 -1.731 2.911 -1.051 ETKDGv3 54
E53 O9 -1.471 1.538 -1.261 ETKDGv3 55
E53 C21 -0.625 3.415 -0.138 ETKDGv3 56
E53 O7 0.578 3.270 -0.478 ETKDGv3 57
E53 C20 -0.902 4.025 1.176 ETKDGv3 58
E53 O6 -1.751 4.954 1.252 ETKDGv3 59
E53 N -0.216 3.575 2.365 ETKDGv3 60
E53 C15 0.101 2.139 2.523 ETKDGv3 61
E53 C14 1.428 1.791 1.903 ETKDGv3 62
E53 O5 2.497 2.294 2.343 ETKDGv3 63
E53 O4 1.459 0.882 0.839 ETKDGv3 64
E53 C19 -0.192 4.464 3.536 ETKDGv3 65
E53 C18 0.949 4.086 4.482 ETKDGv3 66
E53 C17 0.886 2.613 4.932 ETKDGv3 67
E53 C16 0.052 1.710 4.003 ETKDGv3 68
E53 H1 3.693 -1.633 1.259 ETKDGv3 69
E53 H2 3.031 -0.572 2.505 ETKDGv3 70
E53 H3 3.500 0.774 0.525 ETKDGv3 71
E53 H4 1.548 -1.043 -0.996 ETKDGv3 72
E53 H5 1.094 1.091 -1.787 ETKDGv3 73
E53 H6 2.804 1.623 -1.773 ETKDGv3 74
E53 H7 2.218 0.426 -2.998 ETKDGv3 75
E53 H8 3.545 -2.268 -0.992 ETKDGv3 76
E53 H9 3.485 -1.499 -2.572 ETKDGv3 77
E53 H10 5.204 -0.520 -0.188 ETKDGv3 78
E53 H11 5.843 -2.787 -1.036 ETKDGv3 79
E53 H12 6.020 -2.103 -2.677 ETKDGv3 80
E53 H13 8.206 -1.910 -2.042 ETKDGv3 81
E53 H14 8.010 -3.873 -0.513 ETKDGv3 82
E53 H15 9.588 -2.955 -0.443 ETKDGv3 83
E53 H16 8.740 -3.430 1.066 ETKDGv3 84
E53 H17 5.061 1.413 -1.493 ETKDGv3 85
E53 H18 4.792 0.531 -3.036 ETKDGv3 86
E53 H19 7.066 0.196 -3.422 ETKDGv3 87
E53 H20 7.092 1.776 -2.585 ETKDGv3 88
E53 H21 8.843 0.230 -1.705 ETKDGv3 89
E53 H22 7.861 2.532 0.752 ETKDGv3 90
E53 H23 8.701 2.336 -0.807 ETKDGv3 91
E53 H24 10.192 0.577 0.271 ETKDGv3 92
E53 H25 9.327 0.810 1.829 ETKDGv3 93
E53 H26 10.079 2.889 1.921 ETKDGv3 94
E53 H27 1.643 -3.399 3.202 ETKDGv3 95
E53 H28 3.223 -3.912 0.635 ETKDGv3 96
E53 H29 2.835 -5.206 1.832 ETKDGv3 97
E53 H30 3.784 -3.769 2.330 ETKDGv3 98
E53 H31 -0.324 -4.308 2.467 ETKDGv3 99
E53 H32 1.377 -3.272 -0.809 ETKDGv3 100
E53 H33 0.414 -4.445 -1.742 ETKDGv3 101
E53 H34 1.734 -5.048 -0.706 ETKDGv3 102
E53 H35 -1.538 -5.180 -0.927 ETKDGv3 103
E53 H36 -2.445 -6.479 0.537 ETKDGv3 104
E53 H37 -2.245 -3.311 1.427 ETKDGv3 105
E53 H38 -4.535 -3.201 1.915 ETKDGv3 106
E53 H39 -5.465 -4.626 1.344 ETKDGv3 107
E53 H40 -3.925 -4.893 2.229 ETKDGv3 108
E53 H41 -3.451 -3.494 -2.086 ETKDGv3 109
E53 H42 -1.207 -3.286 -3.037 ETKDGv3 110
E53 H43 -2.374 -2.357 -4.033 ETKDGv3 111
E53 H44 -1.266 -1.485 -2.911 ETKDGv3 112
E53 H45 -4.049 -0.924 -0.946 ETKDGv3 113
E53 H46 -3.556 -0.521 -2.593 ETKDGv3 114
E53 H47 -5.669 -2.707 -1.973 ETKDGv3 115
E53 H48 -6.348 -2.288 -4.341 ETKDGv3 116
E53 H49 -4.933 -1.185 -4.547 ETKDGv3 117
E53 H50 -4.688 -2.944 -4.199 ETKDGv3 118
E53 H51 -6.704 -0.064 -2.996 ETKDGv3 119
E53 H52 -7.535 0.413 -0.862 ETKDGv3 120
E53 H53 -6.026 -2.149 0.162 ETKDGv3 121
E53 H54 -6.474 -1.389 2.334 ETKDGv3 122
E53 H55 -8.235 0.559 2.353 ETKDGv3 123
E53 H56 -7.640 2.894 3.215 ETKDGv3 124
E53 H57 -8.322 3.157 1.558 ETKDGv3 125
E53 H58 -6.756 3.914 2.035 ETKDGv3 126
E53 H59 -4.880 0.928 0.718 ETKDGv3 127
E53 H60 -3.125 0.943 2.265 ETKDGv3 128
E53 H61 -4.605 0.969 3.336 ETKDGv3 129
E53 H62 -3.264 2.126 3.608 ETKDGv3 130
E53 H63 -6.234 2.473 -0.845 ETKDGv3 131
E53 H64 -5.511 3.850 0.047 ETKDGv3 132
E53 H65 -4.013 1.611 -1.429 ETKDGv3 133
E53 H66 -4.398 4.627 -2.031 ETKDGv3 134
E53 H67 -5.134 3.252 -2.940 ETKDGv3 135
E53 H68 -2.962 2.469 -3.687 ETKDGv3 136
E53 H69 -3.085 4.223 -4.035 ETKDGv3 137
E53 H70 -1.756 4.828 -2.110 ETKDGv3 138
E53 H71 0.414 3.947 -2.801 ETKDGv3 139
E53 H72 -0.336 2.444 -3.475 ETKDGv3 140
E53 H73 -0.620 4.046 -4.243 ETKDGv3 141
E53 H74 -1.898 1.244 -2.104 ETKDGv3 142
E53 H75 -0.681 1.541 2.004 ETKDGv3 143
E53 H76 -0.043 5.517 3.212 ETKDGv3 144
E53 H77 -1.164 4.397 4.072 ETKDGv3 145
E53 H78 1.914 4.275 3.964 ETKDGv3 146
E53 H79 0.922 4.748 5.374 ETKDGv3 147
E53 H80 1.921 2.213 5.002 ETKDGv3 148
E53 H81 0.453 2.561 5.954 ETKDGv3 149
E53 H82 0.384 0.654 4.109 ETKDGv3 150
E53 H83 -1.006 1.748 4.341 ETKDGv3 151
#