data_E6Y
#
_chem_comp.id E6Y
_chem_comp.name
(5S,8S,10R)-8-[(1R)-2-{[1-(3-tert-butylphenyl)cyclopropyl]amino}-1-hydroxyethyl]-4,5,10-trimethyl-1-oxa-4,7-diazacyclohexadecane-3,6-dione
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H51 N3 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-12-04
_chem_comp.pdbx_modified_date 2020-05-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 529.754
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code E6Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5QD9
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E6Y C2 C1 C 0 1 N N S N N N 27.328 5.705 16.209 -1.268 -2.605 -1.544 C2 E6Y 1
E6Y C4 C2 C 0 1 N N N N N N 28.388 5.952 15.126 -0.520 -1.317 -1.320 C4 E6Y 2
E6Y C12 C3 C 0 1 N N R N N N 31.196 8.387 15.790 -2.269 2.461 0.262 C12 E6Y 3
E6Y C14 C4 C 0 1 N N N N N N 32.224 9.265 16.527 -3.267 3.586 -0.044 C14 E6Y 4
E6Y C17 C5 C 0 1 N N N N N N 31.626 10.408 17.351 -4.377 3.643 1.001 C17 E6Y 5
E6Y C20 C6 C 0 1 N N N N N N 30.581 9.966 18.344 -5.681 3.111 0.405 C20 E6Y 6
E6Y C23 C7 C 0 1 N N N N N N 31.114 9.075 19.460 -6.221 1.957 1.250 C23 E6Y 7
E6Y C26 C8 C 0 1 N N N N N N 30.127 8.815 20.551 -6.602 0.790 0.338 C26 E6Y 8
E6Y C29 C9 C 0 1 N N N N N N 28.729 9.051 20.096 -6.144 -0.532 0.959 C29 E6Y 9
E6Y C33 C10 C 0 1 N N N N N N 26.862 7.806 19.335 -4.642 -2.277 0.266 C33 E6Y 10
E6Y C36 C11 C 0 1 N N N N N N 26.919 6.630 18.399 -3.527 -2.074 -0.738 C36 E6Y 11
E6Y C38 C12 C 0 1 N N N N N N 30.593 9.120 14.601 -3.041 1.177 0.558 C38 E6Y 12
E6Y C42 C13 C 0 1 N N R N N N 31.531 4.785 14.352 0.160 0.910 0.523 C42 E6Y 13
E6Y C46 C14 C 0 1 N N N N N N 30.644 3.956 13.439 1.215 -0.199 0.496 C46 E6Y 14
E6Y C51 C15 C 0 1 N N N N N N 30.733 2.074 11.969 3.011 -1.222 1.756 C51 E6Y 15
E6Y C52 C16 C 0 1 N N N N N N 31.146 0.644 11.821 3.056 -2.112 3.000 C52 E6Y 16
E6Y C55 C17 C 0 1 N N N N N N 29.867 0.953 12.538 2.499 -2.662 1.686 C55 E6Y 17
E6Y C58 C18 C 0 1 Y N N N N N 30.665 2.806 10.649 4.319 -0.915 1.072 C58 E6Y 18
E6Y C59 C19 C 0 1 Y N N N N N 31.852 3.146 10.004 4.478 0.276 0.390 C59 E6Y 19
E6Y C61 C20 C 0 1 Y N N N N N 31.821 3.827 8.792 5.677 0.558 -0.238 C61 E6Y 20
E6Y C62 C21 C 0 1 Y N N N N N 30.590 4.177 8.244 6.717 -0.352 -0.182 C62 E6Y 21
E6Y C64 C22 C 0 1 Y N N N N N 29.408 3.851 8.888 6.558 -1.542 0.502 C64 E6Y 22
E6Y C66 C23 C 0 1 Y N N N N N 29.445 3.161 10.082 5.360 -1.822 1.133 C66 E6Y 23
E6Y C68 C24 C 0 1 N N N N N N 33.116 4.209 8.074 5.851 1.856 -0.983 C68 E6Y 24
E6Y C69 C25 C 0 1 N N N N N N 33.994 2.979 7.836 7.233 1.887 -1.639 C69 E6Y 25
E6Y C7 C26 C 0 1 N N S N N N 30.813 6.095 14.684 -0.447 1.067 -0.867 C7 E6Y 26
E6Y C73 C27 C 0 1 N N N N N N 32.788 4.852 6.747 4.773 1.973 -2.062 C73 E6Y 27
E6Y C77 C28 C 0 1 N N N N N N 33.913 5.224 8.917 5.724 3.026 -0.006 C77 E6Y 28
E6Y C82 C29 C 0 1 N N N N N N 25.970 5.341 15.629 -1.750 -2.715 -2.984 C82 E6Y 29
E6Y C86 C30 C 0 1 N N N N N N 27.525 8.184 16.574 -2.181 -3.642 0.595 C86 E6Y 30
E6Y C9 C31 C 0 1 N N N N N N 31.796 7.031 15.371 -1.357 2.286 -0.948 C9 E6Y 31
E6Y N1 N1 N 0 1 N N N N N N 27.249 6.851 17.115 -2.362 -2.751 -0.569 N1 E6Y 32
E6Y N49 N2 N 0 1 N N N N N N 31.459 2.821 12.986 2.013 -0.145 1.728 N49 E6Y 33
E6Y N5 N3 N 0 1 N N N N N N 29.659 5.867 15.547 -1.203 -0.137 -1.280 N5 E6Y 34
E6Y O32 O1 O 0 1 N N N N N N 28.035 7.822 20.122 -5.738 -1.427 -0.079 O32 E6Y 35
E6Y O37 O2 O 0 1 N N N N N N 26.707 5.504 18.827 -3.729 -1.309 -1.657 O37 E6Y 36
E6Y O44 O3 O 0 1 N N N N N N 32.767 5.054 13.676 0.772 2.139 0.918 O44 E6Y 37
E6Y O81 O4 O 0 1 N N N N N N 28.072 6.210 13.966 0.693 -1.351 -1.205 O81 E6Y 38
E6Y H1 H1 H 0 1 N N N N N N 27.669 4.839 16.796 -0.554 -3.433 -1.367 H1 E6Y 39
E6Y H2 H2 H 0 1 N N N N N N 30.380 8.178 16.497 -1.685 2.749 1.136 H2 E6Y 40
E6Y H3 H3 H 0 1 N N N N N N 32.799 8.619 17.207 -2.731 4.538 -0.057 H3 E6Y 41
E6Y H4 H4 H 0 1 N N N N N N 32.899 9.702 15.777 -3.700 3.415 -1.031 H4 E6Y 42
E6Y H5 H5 H 0 1 N N N N N N 32.441 10.900 17.902 -4.112 3.094 1.896 H5 E6Y 43
E6Y H6 H6 H 0 1 N N N N N N 31.164 11.128 16.660 -4.533 4.694 1.286 H6 E6Y 44
E6Y H7 H7 H 0 1 N N N N N N 30.139 10.863 18.801 -6.419 3.916 0.382 H7 E6Y 45
E6Y H8 H8 H 0 1 N N N N N N 29.803 9.410 17.801 -5.503 2.766 -0.614 H8 E6Y 46
E6Y H9 H9 H 0 1 N N N N N N 31.408 8.110 19.022 -5.470 1.637 1.968 H9 E6Y 47
E6Y H10 H10 H 0 1 N N N N N N 31.997 9.562 19.900 -7.109 2.293 1.791 H10 E6Y 48
E6Y H11 H11 H 0 1 N N N N N N 30.224 7.769 20.878 -7.686 0.770 0.209 H11 E6Y 49
E6Y H12 H12 H 0 1 N N N N N N 30.345 9.485 21.396 -6.126 0.915 -0.635 H12 E6Y 50
E6Y H13 H13 H 0 1 N N N N N N 28.735 9.452 19.072 -5.312 -0.352 1.637 H13 E6Y 51
E6Y H14 H14 H 0 1 N N N N N N 28.237 9.769 20.768 -6.971 -0.976 1.515 H14 E6Y 52
E6Y H15 H15 H 0 1 N N N N N N 26.795 8.738 18.754 -4.971 -3.316 0.235 H15 E6Y 53
E6Y H16 H16 H 0 1 N N N N N N 25.981 7.716 19.987 -4.289 -2.025 1.263 H16 E6Y 54
E6Y H17 H17 H 0 1 N N N N N N 30.175 10.081 14.936 -3.645 0.907 -0.309 H17 E6Y 55
E6Y H18 H18 H 0 1 N N N N N N 31.374 9.302 13.848 -2.339 0.373 0.777 H18 E6Y 56
E6Y H19 H19 H 0 1 N N N N N N 29.794 8.507 14.159 -3.692 1.335 1.418 H19 E6Y 57
E6Y H20 H20 H 0 1 N N N N N N 31.715 4.229 15.283 -0.623 0.649 1.235 H20 E6Y 58
E6Y H21 H21 H 0 1 N N N N N N 30.317 4.557 12.578 0.721 -1.168 0.425 H21 E6Y 59
E6Y H22 H22 H 0 1 N N N N N N 29.763 3.595 13.990 1.867 -0.059 -0.366 H22 E6Y 60
E6Y H23 H23 H 0 1 N N N N N N 31.115 0.166 10.831 4.031 -2.475 3.325 H23 E6Y 61
E6Y H24 H24 H 0 1 N N N N N N 32.010 0.264 12.385 2.345 -1.897 3.798 H24 E6Y 62
E6Y H25 H25 H 0 1 N N N N N N 28.900 0.711 12.072 1.421 -2.810 1.619 H25 E6Y 63
E6Y H26 H26 H 0 1 N N N N N N 29.795 0.809 13.626 3.108 -3.387 1.146 H26 E6Y 64
E6Y H27 H27 H 0 1 N N N N N N 32.800 2.880 10.447 3.666 0.987 0.346 H27 E6Y 65
E6Y H28 H28 H 0 1 N N N N N N 30.556 4.709 7.305 7.654 -0.132 -0.673 H28 E6Y 66
E6Y H29 H29 H 0 1 N N N N N N 28.460 4.136 8.457 7.370 -2.253 0.545 H29 E6Y 67
E6Y H30 H30 H 0 1 N N N N N N 28.523 2.895 10.579 5.236 -2.752 1.667 H30 E6Y 68
E6Y H31 H31 H 0 1 N N N N N N 34.235 2.508 8.800 7.330 1.044 -2.323 H31 E6Y 69
E6Y H32 H32 H 0 1 N N N N N N 33.454 2.260 7.202 7.353 2.819 -2.191 H32 E6Y 70
E6Y H33 H33 H 0 1 N N N N N N 34.924 3.284 7.334 8.002 1.820 -0.869 H33 E6Y 71
E6Y H34 H34 H 0 1 N N N N N N 30.482 6.561 13.744 0.380 1.209 -1.585 H34 E6Y 72
E6Y H35 H35 H 0 1 N N N N N N 32.157 5.737 6.914 3.793 2.046 -1.590 H35 E6Y 73
E6Y H36 H36 H 0 1 N N N N N N 33.719 5.155 6.247 4.954 2.864 -2.663 H36 E6Y 74
E6Y H37 H37 H 0 1 N N N N N N 32.249 4.132 6.114 4.802 1.091 -2.703 H37 E6Y 75
E6Y H38 H38 H 0 1 N N N N N N 34.164 4.777 9.890 6.531 2.979 0.724 H38 E6Y 76
E6Y H39 H39 H 0 1 N N N N N N 34.839 5.493 8.388 5.784 3.966 -0.555 H39 E6Y 77
E6Y H40 H40 H 0 1 N N N N N N 33.305 6.127 9.074 4.765 2.967 0.508 H40 E6Y 78
E6Y H41 H41 H 0 1 N N N N N N 25.254 5.176 16.447 -2.385 -1.861 -3.221 H41 E6Y 79
E6Y H42 H42 H 0 1 N N N N N N 25.613 6.161 14.989 -0.891 -2.727 -3.655 H42 E6Y 80
E6Y H43 H43 H 0 1 N N N N N N 26.061 4.422 15.031 -2.320 -3.636 -3.108 H43 E6Y 81
E6Y H44 H44 H 0 1 N N N N N N 27.425 8.933 17.374 -1.740 -3.080 1.418 H44 E6Y 82
E6Y H45 H45 H 0 1 N N N N N N 28.548 8.212 16.171 -3.149 -4.038 0.903 H45 E6Y 83
E6Y H46 H46 H 0 1 N N N N N N 26.809 8.409 15.770 -1.522 -4.467 0.323 H46 E6Y 84
E6Y H47 H47 H 0 1 N N N N N N 32.176 6.529 16.273 -1.976 2.209 -1.850 H47 E6Y 85
E6Y H48 H48 H 0 1 N N N N N N 32.630 7.222 14.679 -0.736 3.185 -1.054 H48 E6Y 86
E6Y H49 H49 H 0 1 N N N N N N 31.656 2.222 13.762 1.421 -0.179 2.545 H49 E6Y 87
E6Y H51 H51 H 0 1 N N N N N N 29.825 5.634 16.505 -2.139 -0.082 -1.549 H51 E6Y 88
E6Y H52 H52 H 0 1 N N N N N N 33.330 5.573 14.239 1.480 2.433 0.328 H52 E6Y 89
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E6Y C73 C68 SING N N 1
E6Y C69 C68 SING N N 2
E6Y C68 C61 SING N N 3
E6Y C68 C77 SING N N 4
E6Y C62 C61 DOUB Y N 5
E6Y C62 C64 SING Y N 6
E6Y C61 C59 SING Y N 7
E6Y C64 C66 DOUB Y N 8
E6Y C59 C58 DOUB Y N 9
E6Y C66 C58 SING Y N 10
E6Y C58 C51 SING N N 11
E6Y C52 C51 SING N N 12
E6Y C52 C55 SING N N 13
E6Y C51 C55 SING N N 14
E6Y C51 N49 SING N N 15
E6Y N49 C46 SING N N 16
E6Y C46 C42 SING N N 17
E6Y O44 C42 SING N N 18
E6Y O81 C4 DOUB N N 19
E6Y C42 C7 SING N N 20
E6Y C38 C12 SING N N 21
E6Y C7 C9 SING N N 22
E6Y C7 N5 SING N N 23
E6Y C4 N5 SING N N 24
E6Y C4 C2 SING N N 25
E6Y C9 C12 SING N N 26
E6Y C82 C2 SING N N 27
E6Y C12 C14 SING N N 28
E6Y C2 N1 SING N N 29
E6Y C14 C17 SING N N 30
E6Y C86 N1 SING N N 31
E6Y N1 C36 SING N N 32
E6Y C17 C20 SING N N 33
E6Y C20 C23 SING N N 34
E6Y C36 O37 DOUB N N 35
E6Y C36 C33 SING N N 36
E6Y C33 O32 SING N N 37
E6Y C23 C26 SING N N 38
E6Y C29 O32 SING N N 39
E6Y C29 C26 SING N N 40
E6Y C2 H1 SING N N 41
E6Y C12 H2 SING N N 42
E6Y C14 H3 SING N N 43
E6Y C14 H4 SING N N 44
E6Y C17 H5 SING N N 45
E6Y C17 H6 SING N N 46
E6Y C20 H7 SING N N 47
E6Y C20 H8 SING N N 48
E6Y C23 H9 SING N N 49
E6Y C23 H10 SING N N 50
E6Y C26 H11 SING N N 51
E6Y C26 H12 SING N N 52
E6Y C29 H13 SING N N 53
E6Y C29 H14 SING N N 54
E6Y C33 H15 SING N N 55
E6Y C33 H16 SING N N 56
E6Y C38 H17 SING N N 57
E6Y C38 H18 SING N N 58
E6Y C38 H19 SING N N 59
E6Y C42 H20 SING N N 60
E6Y C46 H21 SING N N 61
E6Y C46 H22 SING N N 62
E6Y C52 H23 SING N N 63
E6Y C52 H24 SING N N 64
E6Y C55 H25 SING N N 65
E6Y C55 H26 SING N N 66
E6Y C59 H27 SING N N 67
E6Y C62 H28 SING N N 68
E6Y C64 H29 SING N N 69
E6Y C66 H30 SING N N 70
E6Y C69 H31 SING N N 71
E6Y C69 H32 SING N N 72
E6Y C69 H33 SING N N 73
E6Y C7 H34 SING N N 74
E6Y C73 H35 SING N N 75
E6Y C73 H36 SING N N 76
E6Y C73 H37 SING N N 77
E6Y C77 H38 SING N N 78
E6Y C77 H39 SING N N 79
E6Y C77 H40 SING N N 80
E6Y C82 H41 SING N N 81
E6Y C82 H42 SING N N 82
E6Y C82 H43 SING N N 83
E6Y C86 H44 SING N N 84
E6Y C86 H45 SING N N 85
E6Y C86 H46 SING N N 86
E6Y C9 H47 SING N N 87
E6Y C9 H48 SING N N 88
E6Y N49 H49 SING N N 89
E6Y N5 H51 SING N N 90
E6Y O44 H52 SING N N 91
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E6Y SMILES ACDLabs 12.01 C3(N(C(COCCCCCCC(C)CC(C(CNC1(CC1)c2cc(ccc2)C(C)(C)C)O)NC3=O)=O)C)C
E6Y InChI InChI 1.03 InChI=1S/C31H51N3O4/c1-22-12-9-7-8-10-17-38-21-28(36)34(6)23(2)29(37)33-26(18-22)27(35)20-32-31(15-16-31)25-14-11-13-24(19-25)30(3,4)5/h11,13-14,19,22-23,26-27,32,35H,7-10,12,15-18,20-21H2,1-6H3,(H,33,37)/t22-,23+,26+,27-/m1/s1
E6Y InChIKey InChI 1.03 DTTFGMDFRQRNPI-GXVHRJHYSA-N
E6Y SMILES_CANONICAL CACTVS 3.385 C[C@@H]1CCCCCCOCC(=O)N(C)[C@@H](C)C(=O)N[C@@H](C1)[C@H](O)CNC2(CC2)c3cccc(c3)C(C)(C)C
E6Y SMILES CACTVS 3.385 C[CH]1CCCCCCOCC(=O)N(C)[CH](C)C(=O)N[CH](C1)[CH](O)CNC2(CC2)c3cccc(c3)C(C)(C)C
E6Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C[C@@H]1CCCCCCOCC(=O)N([C@H](C(=O)N[C@@H](C1)[C@@H](CNC2(CC2)c3cccc(c3)C(C)(C)C)O)C)C
E6Y SMILES "OpenEye OEToolkits" 2.0.6 CC1CCCCCCOCC(=O)N(C(C(=O)NC(C1)C(CNC2(CC2)c3cccc(c3)C(C)(C)C)O)C)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
E6Y "SYSTEMATIC NAME" ACDLabs 12.01 (5S,8S,10R)-8-[(1R)-2-{[1-(3-tert-butylphenyl)cyclopropyl]amino}-1-hydroxyethyl]-4,5,10-trimethyl-1-oxa-4,7-diazacyclohexadecane-3,6-dione
E6Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 (5~{S},8~{S},10~{R})-8-[(1~{R})-2-[[1-(3-~{tert}-butylphenyl)cyclopropyl]amino]-1-oxidanyl-ethyl]-4,5,10-trimethyl-1-oxa-4,7-diazacyclohexadecane-3,6-dione
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E6Y 'Create component' 2017-12-04 RCSB
E6Y 'Initial release' 2020-06-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
E6Y C2 C 13.392 -3.275 1
E6Y C4 C 12.093 -2.525 2
E6Y C12 C 6.897 -2.525 3
E6Y C14 C 5.598 -3.275 4
E6Y C17 C 5.598 -4.774 5
E6Y C20 C 6.897 -5.524 6
E6Y C23 C 6.897 -7.024 7
E6Y C26 C 8.196 -7.774 8
E6Y C29 C 9.495 -7.024 9
E6Y C33 C 12.093 -7.024 10
E6Y C36 C 12.093 -5.524 11
E6Y C38 C 6.897 -1.024 12
E6Y C42 C 9.495 -1.024 13
E6Y C46 C 8.196 -0.275 14
E6Y C51 C 6.897 1.976 15
E6Y C52 C 5.397 1.976 16
E6Y C55 C 6.147 0.676 17
E6Y C58 C 6.897 3.475 18
E6Y C59 C 5.598 4.226 19
E6Y C61 C 5.598 5.726 20
E6Y C62 C 6.897 6.476 21
E6Y C64 C 8.196 5.726 22
E6Y C66 C 8.196 4.226 23
E6Y C68 C 4.299 6.476 24
E6Y C69 C 5.049 7.774 25
E6Y C7 C 9.495 -2.525 26
E6Y C73 C 3.000 7.226 27
E6Y C77 C 3.549 5.176 28
E6Y C82 C 14.691 -2.525 29
E6Y C86 C 14.691 -5.524 30
E6Y C9 C 8.196 -3.275 31
E6Y N1 N 13.392 -4.774 32
E6Y N49 N 8.196 1.226 33
E6Y N5 N 10.794 -3.275 34
E6Y O32 O 10.794 -7.774 35
E6Y O37 O 10.593 -5.524 36
E6Y O44 O 10.794 -0.275 37
E6Y O81 O 12.093 -1.024 38
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
E6Y C73 C68 SINGLE NONE 1
E6Y C69 C68 SINGLE NONE 2
E6Y C68 C61 SINGLE NONE 3
E6Y C68 C77 SINGLE NONE 4
E6Y C62 C61 SINGLE NONE 5
E6Y C62 C64 DOUBLE NONE 6
E6Y C61 C59 DOUBLE NONE 7
E6Y C64 C66 SINGLE NONE 8
E6Y C59 C58 SINGLE NONE 9
E6Y C66 C58 DOUBLE NONE 10
E6Y C58 C51 SINGLE NONE 11
E6Y C52 C51 SINGLE NONE 12
E6Y C52 C55 SINGLE NONE 13
E6Y C51 C55 SINGLE NONE 14
E6Y C51 N49 SINGLE NONE 15
E6Y N49 C46 SINGLE NONE 16
E6Y C46 C42 SINGLE NONE 17
E6Y C42 O44 SINGLE BEGINWEDGE 18
E6Y O81 C4 DOUBLE NONE 19
E6Y C42 C7 SINGLE NONE 20
E6Y C12 C38 SINGLE BEGINWEDGE 21
E6Y C7 C9 SINGLE BEGINWEDGE 22
E6Y C7 N5 SINGLE NONE 23
E6Y C4 N5 SINGLE NONE 24
E6Y C4 C2 SINGLE NONE 25
E6Y C9 C12 SINGLE NONE 26
E6Y C2 C82 SINGLE BEGINDASH 27
E6Y C12 C14 SINGLE NONE 28
E6Y C2 N1 SINGLE NONE 29
E6Y C14 C17 SINGLE NONE 30
E6Y C86 N1 SINGLE NONE 31
E6Y N1 C36 SINGLE NONE 32
E6Y C17 C20 SINGLE NONE 33
E6Y C20 C23 SINGLE NONE 34
E6Y C36 O37 DOUBLE NONE 35
E6Y C36 C33 SINGLE NONE 36
E6Y C33 O32 SINGLE NONE 37
E6Y C23 C26 SINGLE NONE 38
E6Y C29 O32 SINGLE NONE 39
E6Y C29 C26 SINGLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
E6Y MurckoScaffold S1 scaffold 'O=C1COCCCCCCCC[C@@H](CCNC2(c3ccccc3)CC2)NC(=O)CN1' InChI=1S/C24H37N3O3/c28-22-18-25-23(29)19-30-17-9-4-2-1-3-8-12-21(27-22)13-16-26-24(14-15-24)20-10-6-5-7-11-20/h5-7,10-11,21,26H,1-4,8-9,12-19H2,(H,25,29)(H,27,28)/t21-/m0/s1 OAYFXNQTGXYALL-NRFANRHFSA-N
E6Y amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
E6Y cyclopropane F2 fragment C1CC1 InChI=1S/C3H6/c1-2-3-1/h1-3H2 LVZWSLJZHVFIQJ-UHFFFAOYSA-N
E6Y peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
E6Y phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
E6Y C2 S1 1
E6Y C4 S1 1
E6Y C12 S1 1
E6Y C14 S1 1
E6Y C17 S1 1
E6Y C20 S1 1
E6Y C23 S1 1
E6Y C26 S1 1
E6Y C29 S1 1
E6Y C33 S1 1
E6Y C36 S1 1
E6Y C42 S1 1
E6Y C46 S1 1
E6Y C51 S1 1
E6Y C52 S1 1
E6Y C55 S1 1
E6Y C58 S1 1
E6Y C59 S1 1
E6Y C61 S1 1
E6Y C62 S1 1
E6Y C64 S1 1
E6Y C66 S1 1
E6Y C7 S1 1
E6Y C9 S1 1
E6Y N1 S1 1
E6Y N49 S1 1
E6Y N5 S1 1
E6Y O32 S1 1
E6Y O37 S1 1
E6Y O81 S1 1
E6Y N1 F1 1
E6Y C36 F1 1
E6Y O37 F1 1
E6Y C33 F1 1
E6Y N5 F1 2
E6Y C4 F1 2
E6Y O81 F1 2
E6Y C2 F1 2
E6Y C51 F2 1
E6Y C52 F2 1
E6Y C55 F2 1
E6Y O81 F3 1
E6Y C4 F3 1
E6Y C2 F3 1
E6Y N1 F3 1
E6Y C58 F4 1
E6Y C59 F4 1
E6Y C61 F4 1
E6Y C62 F4 1
E6Y C64 F4 1
E6Y C66 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id E6Y
_pdbe_chem_comp_rdkit_properties.exactmw 529.388
_pdbe_chem_comp_rdkit_properties.amw 529.766
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38
_pdbe_chem_comp_rdkit_properties.NumAtoms 89
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.742
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 301.490
_pdbe_chem_comp_rdkit_properties.tpsa 90.900
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.153
_pdbe_chem_comp_rdkit_properties.CrippenMR 151.379
_pdbe_chem_comp_rdkit_properties.chi0v 18.475
_pdbe_chem_comp_rdkit_properties.chi1v 9.586
_pdbe_chem_comp_rdkit_properties.chi2v 3.965
_pdbe_chem_comp_rdkit_properties.chi3v 3.965
_pdbe_chem_comp_rdkit_properties.chi4v 2.155
_pdbe_chem_comp_rdkit_properties.chi0n 69.475
_pdbe_chem_comp_rdkit_properties.chi1n 34.889
_pdbe_chem_comp_rdkit_properties.chi2n 3.965
_pdbe_chem_comp_rdkit_properties.chi3n 3.965
_pdbe_chem_comp_rdkit_properties.chi4n 2.155
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.960
_pdbe_chem_comp_rdkit_properties.kappa1 5.581
_pdbe_chem_comp_rdkit_properties.kappa2 13.403
_pdbe_chem_comp_rdkit_properties.kappa3 8.520
_pdbe_chem_comp_rdkit_properties.Phi 1.969
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
E6Y UniChem PDBe E6Y
E6Y UniChem SureChEMBL SCHEMBL4174750
E6Y UniChem PubChem 68942945
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
E6Y C2 -3.217 2.967 -1.594 ETKDGv3 1
E6Y C4 -2.237 2.422 -0.586 ETKDGv3 2
E6Y C12 0.129 -1.547 1.133 ETKDGv3 3
E6Y C14 -0.950 -1.648 2.242 ETKDGv3 4
E6Y C17 -2.065 -2.684 1.966 ETKDGv3 5
E6Y C20 -3.378 -2.324 2.679 ETKDGv3 6
E6Y C23 -4.181 -1.282 1.885 ETKDGv3 7
E6Y C26 -5.379 -0.763 2.692 ETKDGv3 8
E6Y C29 -6.198 0.253 1.893 ETKDGv3 9
E6Y C33 -6.119 2.322 0.855 ETKDGv3 10
E6Y C36 -5.181 3.156 0.033 ETKDGv3 11
E6Y C38 0.712 -2.925 0.789 ETKDGv3 12
E6Y C42 0.977 1.372 -0.266 ETKDGv3 13
E6Y C46 1.320 1.547 -1.762 ETKDGv3 14
E6Y C51 3.551 1.096 -2.647 ETKDGv3 15
E6Y C52 4.823 1.739 -3.193 ETKDGv3 16
E6Y C55 3.702 1.343 -4.146 ETKDGv3 17
E6Y C58 3.775 -0.276 -2.060 ETKDGv3 18
E6Y C59 4.454 -0.399 -0.748 ETKDGv3 19
E6Y C61 4.636 -1.607 -0.163 ETKDGv3 20
E6Y C62 4.156 -2.815 -0.899 ETKDGv3 21
E6Y C64 3.525 -2.701 -2.071 ETKDGv3 22
E6Y C66 3.307 -1.375 -2.670 ETKDGv3 23
E6Y C68 5.284 -1.784 1.224 ETKDGv3 24
E6Y C69 6.525 -2.693 1.097 ETKDGv3 25
E6Y C7 -0.415 0.725 -0.006 ETKDGv3 26
E6Y C73 5.741 -0.451 1.867 ETKDGv3 27
E6Y C77 4.263 -2.439 2.179 ETKDGv3 28
E6Y C82 -3.013 4.468 -1.840 ETKDGv3 29
E6Y C86 -5.380 1.690 -1.995 ETKDGv3 30
E6Y C9 -0.383 -0.821 -0.143 ETKDGv3 31
E6Y N1 -4.604 2.645 -1.193 ETKDGv3 32
E6Y N49 2.704 2.033 -1.887 ETKDGv3 33
E6Y N5 -1.429 1.279 -0.913 ETKDGv3 34
E6Y O32 -5.363 1.318 1.495 ETKDGv3 35
E6Y O37 -4.848 4.289 0.470 ETKDGv3 36
E6Y O44 1.076 2.604 0.404 ETKDGv3 37
E6Y O81 -2.153 2.951 0.556 ETKDGv3 38
E6Y H1 -2.992 2.484 -2.570 ETKDGv3 39
E6Y H2 0.969 -0.955 1.557 ETKDGv3 40
E6Y H3 -1.385 -0.645 2.421 ETKDGv3 41
E6Y H4 -0.451 -1.927 3.196 ETKDGv3 42
E6Y H5 -1.721 -3.675 2.337 ETKDGv3 43
E6Y H6 -2.263 -2.805 0.881 ETKDGv3 44
E6Y H7 -3.159 -1.951 3.704 ETKDGv3 45
E6Y H8 -3.996 -3.243 2.780 ETKDGv3 46
E6Y H9 -4.543 -1.744 0.940 ETKDGv3 47
E6Y H10 -3.524 -0.427 1.617 ETKDGv3 48
E6Y H11 -6.036 -1.615 2.973 ETKDGv3 49
E6Y H12 -5.016 -0.280 3.626 ETKDGv3 50
E6Y H13 -7.027 0.620 2.541 ETKDGv3 51
E6Y H14 -6.629 -0.259 1.002 ETKDGv3 52
E6Y H15 -6.918 1.913 0.195 ETKDGv3 53
E6Y H16 -6.609 2.959 1.624 ETKDGv3 54
E6Y H17 1.593 -2.805 0.128 ETKDGv3 55
E6Y H18 1.043 -3.446 1.712 ETKDGv3 56
E6Y H19 -0.034 -3.556 0.261 ETKDGv3 57
E6Y H20 1.755 0.711 0.171 ETKDGv3 58
E6Y H21 1.161 0.588 -2.303 ETKDGv3 59
E6Y H22 0.622 2.282 -2.222 ETKDGv3 60
E6Y H23 5.714 1.078 -3.272 ETKDGv3 61
E6Y H24 4.922 2.837 -3.061 ETKDGv3 62
E6Y H25 3.951 0.457 -4.768 ETKDGv3 63
E6Y H26 3.132 2.205 -4.552 ETKDGv3 64
E6Y H27 4.775 0.518 -0.278 ETKDGv3 65
E6Y H28 4.290 -3.803 -0.481 ETKDGv3 66
E6Y H29 3.166 -3.585 -2.582 ETKDGv3 67
E6Y H30 2.766 -1.306 -3.606 ETKDGv3 68
E6Y H31 7.249 -2.259 0.375 ETKDGv3 69
E6Y H32 7.035 -2.804 2.079 ETKDGv3 70
E6Y H33 6.252 -3.711 0.750 ETKDGv3 71
E6Y H34 -0.707 0.966 1.037 ETKDGv3 72
E6Y H35 6.205 -0.632 2.861 ETKDGv3 73
E6Y H36 6.499 0.055 1.231 ETKDGv3 74
E6Y H37 4.877 0.231 2.023 ETKDGv3 75
E6Y H38 3.961 -3.447 1.824 ETKDGv3 76
E6Y H39 4.694 -2.558 3.196 ETKDGv3 77
E6Y H40 3.350 -1.810 2.258 ETKDGv3 78
E6Y H41 -2.053 4.630 -2.374 ETKDGv3 79
E6Y H42 -3.836 4.863 -2.473 ETKDGv3 80
E6Y H43 -2.971 5.045 -0.895 ETKDGv3 81
E6Y H44 -6.378 2.119 -2.227 ETKDGv3 82
E6Y H45 -5.504 0.740 -1.435 ETKDGv3 83
E6Y H46 -4.884 1.457 -2.960 ETKDGv3 84
E6Y H47 -1.401 -1.186 -0.391 ETKDGv3 85
E6Y H48 0.254 -1.094 -1.012 ETKDGv3 86
E6Y H49 2.685 2.977 -2.343 ETKDGv3 87
E6Y H51 -1.509 0.869 -1.872 ETKDGv3 88
E6Y H52 0.456 3.240 -0.038 ETKDGv3 89
#