data_E92
#
_chem_comp.id E92
_chem_comp.name ~{N}-(3-chlorophenyl)-4-oxidanylidene-chromene-3-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C16 H10 Cl N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-03-05
_chem_comp.pdbx_modified_date 2018-04-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 299.709
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code E92
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6FW0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E92 OAB O1 O 0 1 N N N N N N 52.786 155.874 27.140 -1.219 -1.260 1.041 OAB E92 1
E92 CAS C1 C 0 1 N N N N N N 52.346 154.725 27.160 -1.901 -0.426 0.472 CAS E92 2
E92 CAU C2 C 0 1 Y N N N N N 52.777 153.795 26.192 -3.333 -0.650 0.177 CAU E92 3
E92 CAJ C3 C 0 1 Y N N N N N 53.590 154.168 25.108 -3.909 -1.912 0.294 CAJ E92 4
E92 CAE C4 C 0 1 Y N N N N N 54.002 153.209 24.173 -5.247 -2.077 0.003 CAE E92 5
E92 CAD C5 C 0 1 Y N N N N N 53.636 151.873 24.282 -6.010 -0.993 -0.405 CAD E92 6
E92 CAI C6 C 0 1 Y N N N N N 52.836 151.507 25.359 -5.449 0.260 -0.523 CAI E92 7
E92 CAT C7 C 0 1 Y N N N N N 52.429 152.454 26.292 -4.103 0.451 -0.231 CAT E92 8
E92 OAN O2 O 0 1 N N N N N N 51.636 152.061 27.330 -3.550 1.675 -0.332 OAN E92 9
E92 CAK C8 C 0 1 N N N N N N 51.119 152.966 28.196 -2.233 1.843 -0.353 CAK E92 10
E92 CAR C9 C 0 1 N N N N N N 51.468 154.321 28.195 -1.353 0.875 0.037 CAR E92 11
E92 CAO C10 C 0 1 N N N N N N 50.747 155.169 29.100 0.099 1.120 0.020 CAO E92 12
E92 OAA O3 O 0 1 N N N N N N 49.852 154.673 29.790 0.530 2.198 -0.342 OAA E92 13
E92 NAM N1 N 0 1 N N N N N N 51.112 156.480 29.182 0.950 0.148 0.404 NAM E92 14
E92 CAQ C11 C 0 1 Y N N N N N 50.456 157.469 29.850 2.331 0.345 0.297 CAQ E92 15
E92 CAL C12 C 0 1 Y N N N N N 49.126 157.451 30.268 3.162 -0.717 -0.033 CAL E92 16
E92 CAP C13 C 0 1 Y N N N N N 48.560 158.549 30.921 4.525 -0.519 -0.139 CAP E92 17
E92 CL CL1 CL 0 0 N N N N N N 46.911 158.479 31.405 5.566 -1.846 -0.551 CL E92 18
E92 CAG C14 C 0 1 Y N N N N N 49.290 159.712 31.167 5.062 0.737 0.084 CAG E92 19
E92 CAF C15 C 0 1 Y N N N N N 50.624 159.753 30.751 4.237 1.796 0.413 CAF E92 20
E92 CAH C16 C 0 1 Y N N N N N 51.183 158.655 30.097 2.872 1.605 0.514 CAH E92 21
E92 H1 H1 H 0 1 N N N N N N 53.898 155.197 24.995 -3.313 -2.755 0.612 H1 E92 22
E92 H2 H2 H 0 1 N N N N N N 54.622 153.517 23.344 -5.701 -3.053 0.092 H2 E92 23
E92 H3 H3 H 0 1 N N N N N N 53.962 151.144 23.555 -7.056 -1.133 -0.632 H3 E92 24
E92 H4 H4 H 0 1 N N N N N N 52.528 150.478 25.472 -6.056 1.095 -0.842 H4 E92 25
E92 H5 H5 H 0 1 N N N N N N 50.400 152.623 28.925 -1.840 2.790 -0.691 H5 E92 26
E92 H6 H6 H 0 1 N N N N N N 51.949 156.743 28.702 0.606 -0.688 0.756 H6 E92 27
E92 H7 H7 H 0 1 N N N N N N 48.523 156.574 30.084 2.743 -1.697 -0.207 H7 E92 28
E92 H8 H8 H 0 1 N N N N N N 48.837 160.557 31.665 6.128 0.890 0.001 H8 E92 29
E92 H9 H9 H 0 1 N N N N N N 51.221 160.634 30.936 4.659 2.775 0.586 H9 E92 30
E92 H10 H10 H 0 1 N N N N N N 52.210 158.714 29.767 2.228 2.435 0.766 H10 E92 31
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E92 CAE CAD DOUB Y N 1
E92 CAE CAJ SING Y N 2
E92 CAD CAI SING Y N 3
E92 CAJ CAU DOUB Y N 4
E92 CAI CAT DOUB Y N 5
E92 CAU CAT SING Y N 6
E92 CAU CAS SING N N 7
E92 CAT OAN SING N N 8
E92 OAB CAS DOUB N N 9
E92 CAS CAR SING N N 10
E92 OAN CAK SING N N 11
E92 CAR CAK DOUB N N 12
E92 CAR CAO SING N N 13
E92 CAO NAM SING N N 14
E92 CAO OAA DOUB N N 15
E92 NAM CAQ SING N N 16
E92 CAQ CAH DOUB Y N 17
E92 CAQ CAL SING Y N 18
E92 CAH CAF SING Y N 19
E92 CAL CAP DOUB Y N 20
E92 CAF CAG DOUB Y N 21
E92 CAP CAG SING Y N 22
E92 CAP CL SING N N 23
E92 CAJ H1 SING N N 24
E92 CAE H2 SING N N 25
E92 CAD H3 SING N N 26
E92 CAI H4 SING N N 27
E92 CAK H5 SING N N 28
E92 NAM H6 SING N N 29
E92 CAL H7 SING N N 30
E92 CAG H8 SING N N 31
E92 CAF H9 SING N N 32
E92 CAH H10 SING N N 33
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E92 InChI InChI 1.03 InChI=1S/C16H10ClNO3/c17-10-4-3-5-11(8-10)18-16(20)13-9-21-14-7-2-1-6-12(14)15(13)19/h1-9H,(H,18,20)
E92 InChIKey InChI 1.03 CVLFPXGWUQAEEW-UHFFFAOYSA-N
E92 SMILES_CANONICAL CACTVS 3.385 Clc1cccc(NC(=O)C2=COc3ccccc3C2=O)c1
E92 SMILES CACTVS 3.385 Clc1cccc(NC(=O)C2=COc3ccccc3C2=O)c1
E92 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1ccc2c(c1)C(=O)C(=CO2)C(=O)Nc3cccc(c3)Cl
E92 SMILES "OpenEye OEToolkits" 2.0.6 c1ccc2c(c1)C(=O)C(=CO2)C(=O)Nc3cccc(c3)Cl
#
_pdbx_chem_comp_identifier.comp_id E92
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier ~{N}-(3-chlorophenyl)-4-oxidanylidene-chromene-3-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E92 'Create component' 2018-03-05 EBI
E92 'Initial release' 2018-04-25 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
E92 OAB O 6.999 1.151 1
E92 CAS C 6.999 -0.349 2
E92 CAU C 5.700 -1.099 3
E92 CAJ C 4.359 -0.297 4
E92 CAE C 3.000 -1.068 5
E92 CAD C 3.000 -2.630 6
E92 CAI C 4.359 -3.401 7
E92 CAT C 5.700 -2.599 8
E92 OAN O 6.999 -3.349 9
E92 CAK C 8.298 -2.599 10
E92 CAR C 8.298 -1.099 11
E92 CAO C 9.597 -0.349 12
E92 OAA O 9.597 1.151 13
E92 NAM N 10.896 -1.099 14
E92 CAQ C 12.195 -0.349 15
E92 CAL C 12.195 1.151 16
E92 CAP C 13.494 1.901 17
E92 CL Cl 13.494 3.401 18
E92 CAG C 14.793 1.151 19
E92 CAF C 14.793 -0.349 20
E92 CAH C 13.494 -1.099 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
E92 CAE CAD DOUBLE NONE 1
E92 CAE CAJ SINGLE NONE 2
E92 CAD CAI SINGLE NONE 3
E92 CAJ CAU DOUBLE NONE 4
E92 CAI CAT DOUBLE NONE 5
E92 CAU CAT SINGLE NONE 6
E92 CAU CAS SINGLE NONE 7
E92 CAT OAN SINGLE NONE 8
E92 OAB CAS DOUBLE NONE 9
E92 CAS CAR SINGLE NONE 10
E92 OAN CAK SINGLE NONE 11
E92 CAR CAK DOUBLE NONE 12
E92 CAR CAO SINGLE NONE 13
E92 CAO NAM SINGLE NONE 14
E92 CAO OAA DOUBLE NONE 15
E92 NAM CAQ SINGLE NONE 16
E92 CAQ CAH SINGLE NONE 17
E92 CAQ CAL DOUBLE NONE 18
E92 CAH CAF DOUBLE NONE 19
E92 CAL CAP SINGLE NONE 20
E92 CAF CAG SINGLE NONE 21
E92 CAP CAG DOUBLE NONE 22
E92 CAP CL SINGLE NONE 23
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
E92 MurckoScaffold S1 scaffold O=C(Nc1ccccc1)c1coc2ccccc2c1=O InChI=1S/C16H11NO3/c18-15-12-8-4-5-9-14(12)20-10-13(15)16(19)17-11-6-2-1-3-7-11/h1-10H,(H,17,19) NVUUCSMDDBUOOH-UHFFFAOYSA-N
E92 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
E92 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
E92 OAB S1 1
E92 CAS S1 1
E92 CAU S1 1
E92 CAJ S1 1
E92 CAE S1 1
E92 CAD S1 1
E92 CAI S1 1
E92 CAT S1 1
E92 OAN S1 1
E92 CAK S1 1
E92 CAR S1 1
E92 CAO S1 1
E92 OAA S1 1
E92 NAM S1 1
E92 CAQ S1 1
E92 CAL S1 1
E92 CAP S1 1
E92 CAG S1 1
E92 CAF S1 1
E92 CAH S1 1
E92 NAM F1 1
E92 CAO F1 1
E92 OAA F1 1
E92 CAR F1 1
E92 CAU F2 1
E92 CAJ F2 1
E92 CAE F2 1
E92 CAD F2 1
E92 CAI F2 1
E92 CAT F2 1
E92 CAQ F2 2
E92 CAH F2 2
E92 CAF F2 2
E92 CAG F2 2
E92 CAP F2 2
E92 CAL F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id E92
_pdbe_chem_comp_rdkit_properties.exactmw 299.035
_pdbe_chem_comp_rdkit_properties.amw 299.713
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 31
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 138.624
_pdbe_chem_comp_rdkit_properties.tpsa 59.310
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.735
_pdbe_chem_comp_rdkit_properties.CrippenMR 78.701
_pdbe_chem_comp_rdkit_properties.chi0v 10.806
_pdbe_chem_comp_rdkit_properties.chi1v 5.831
_pdbe_chem_comp_rdkit_properties.chi2v 2.560
_pdbe_chem_comp_rdkit_properties.chi3v 2.560
_pdbe_chem_comp_rdkit_properties.chi4v 1.614
_pdbe_chem_comp_rdkit_properties.chi0n 20.050
_pdbe_chem_comp_rdkit_properties.chi1n 10.400
_pdbe_chem_comp_rdkit_properties.chi2n 2.371
_pdbe_chem_comp_rdkit_properties.chi3n 2.371
_pdbe_chem_comp_rdkit_properties.chi4n 1.477
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.590
_pdbe_chem_comp_rdkit_properties.kappa1 6.034
_pdbe_chem_comp_rdkit_properties.kappa2 5.420
_pdbe_chem_comp_rdkit_properties.kappa3 2.662
_pdbe_chem_comp_rdkit_properties.Phi 1.557
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
E92 UniChem ChEMBL CHEMBL4206812
E92 UniChem PDBe E92
E92 UniChem PubChem 132941420
E92 UniChem Nikkaji J3.612.794E
E92 UniChem BindingDb 50453019
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
E92 OAB 0.699 1.203 -0.526 ETKDGv3 1
E92 CAS 1.406 0.236 -0.133 ETKDGv3 2
E92 CAU 2.871 0.276 -0.296 ETKDGv3 3
E92 CAJ 3.510 1.279 -0.924 ETKDGv3 4
E92 CAE 4.985 1.253 -1.039 ETKDGv3 5
E92 CAD 5.682 0.235 -0.517 ETKDGv3 6
E92 CAI 4.979 -0.866 0.176 ETKDGv3 7
E92 CAT 3.644 -0.845 0.279 ETKDGv3 8
E92 OAN 2.966 -1.878 0.930 ETKDGv3 9
E92 CAK 1.567 -1.910 1.042 ETKDGv3 10
E92 CAR 0.782 -0.936 0.538 ETKDGv3 11
E92 CAO -0.692 -1.035 0.678 ETKDGv3 12
E92 OAA -1.184 -1.666 1.654 ETKDGv3 13
E92 NAM -1.561 -0.473 -0.320 ETKDGv3 14
E92 CAQ -2.955 -0.191 -0.108 ETKDGv3 15
E92 CAL -3.423 0.198 1.095 ETKDGv3 16
E92 CAP -4.859 0.511 1.272 ETKDGv3 17
E92 CL -5.456 0.998 2.848 ETKDGv3 18
E92 CAG -5.696 0.427 0.230 ETKDGv3 19
E92 CAF -5.187 0.026 -1.096 ETKDGv3 20
E92 CAH -3.889 -0.262 -1.258 ETKDGv3 21
E92 H1 2.964 2.111 -1.350 ETKDGv3 22
E92 H2 5.499 2.059 -1.546 ETKDGv3 23
E92 H3 6.761 0.216 -0.600 ETKDGv3 24
E92 H4 5.547 -1.685 0.597 ETKDGv3 25
E92 H5 1.123 -2.760 1.544 ETKDGv3 26
E92 H6 -1.189 -0.375 -1.291 ETKDGv3 27
E92 H7 -2.758 0.314 1.940 ETKDGv3 28
E92 H8 -6.747 0.656 0.351 ETKDGv3 29
E92 H9 -5.865 -0.032 -1.937 ETKDGv3 30
E92 H10 -3.523 -0.555 -2.234 ETKDGv3 31
#