data_EJO
#
_chem_comp.id EJO
_chem_comp.name 7-(diethylamino)chromen-2-one
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H15 N O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-01-08
_chem_comp.pdbx_modified_date 2020-02-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 217.264
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code EJO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6JEZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EJO CBF C1 C 0 1 N N N N N N 23.051 9.001 2.956 3.741 0.693 0.092 CBF EJO 1
EJO CAQ C2 C 0 1 N N N N N N 21.927 9.363 3.692 2.747 1.595 0.306 CAQ EJO 2
EJO CBG C3 C 0 1 N N N N N N 22.976 8.785 1.581 3.421 -0.648 -0.198 CBG EJO 3
EJO OAE O1 O 0 1 N N N N N N 24.008 8.462 0.954 4.322 -1.445 -0.388 OAE EJO 4
EJO OBB O2 O 0 1 N N N N N N 21.790 8.922 0.903 2.149 -1.069 -0.271 OBB EJO 5
EJO CBI C4 C 0 1 Y N N N N N 20.651 9.276 1.576 1.114 -0.226 -0.069 CBI EJO 6
EJO CAP C5 C 0 1 Y N N N N N 19.437 9.421 0.918 -0.194 -0.677 -0.147 CAP EJO 7
EJO CBH C6 C 0 1 Y N N N N N 20.712 9.509 3.038 1.362 1.128 0.231 CBH EJO 8
EJO CAN C7 C 0 1 Y N N N N N 19.557 9.868 3.717 0.293 2.006 0.442 CAN EJO 9
EJO CAM C8 C 0 1 Y N N N N N 18.363 10.001 3.013 -0.989 1.548 0.357 CAM EJO 10
EJO CBE C9 C 0 1 Y N N N N N 18.302 9.782 1.638 -1.242 0.207 0.064 CBE EJO 11
EJO NBP N1 N 0 1 N N N N N N 17.080 9.928 0.971 -2.555 -0.247 -0.014 NBP EJO 12
EJO CAS C10 C 0 1 N N N N N N 17.038 10.400 -0.405 -2.826 -1.654 -0.319 CAS EJO 13
EJO CAB C11 C 0 1 N N N N N N 17.830 11.684 -0.523 -2.898 -2.454 0.983 CAB EJO 14
EJO CAR C12 C 0 1 N N N N N N 15.827 9.610 1.639 -3.666 0.682 0.208 CAR EJO 15
EJO CAA C13 C 0 1 N N N N N N 15.044 10.883 1.877 -4.075 1.315 -1.123 CAA EJO 16
EJO H1 H1 H 0 1 N N N N N N 23.999 8.885 3.460 4.774 1.005 0.140 H1 EJO 17
EJO H2 H2 H 0 1 N N N N N N 21.999 9.528 4.757 2.973 2.628 0.526 H2 EJO 18
EJO H3 H3 H 0 1 N N N N N N 19.374 9.254 -0.147 -0.396 -1.714 -0.372 H3 EJO 19
EJO H4 H4 H 0 1 N N N N N N 19.584 10.043 4.782 0.482 3.044 0.673 H4 EJO 20
EJO H5 H5 H 0 1 N N N N N N 17.465 10.280 3.544 -1.814 2.226 0.520 H5 EJO 21
EJO H6 H6 H 0 1 N N N N N N 15.994 10.585 -0.697 -3.776 -1.735 -0.848 H6 EJO 22
EJO H7 H7 H 0 1 N N N N N N 17.474 9.638 -1.067 -2.027 -2.051 -0.946 H7 EJO 23
EJO H8 H8 H 0 1 N N N N N N 17.798 12.041 -1.563 -3.100 -3.501 0.756 H8 EJO 24
EJO H9 H9 H 0 1 N N N N N N 17.394 12.446 0.139 -1.948 -2.373 1.512 H9 EJO 25
EJO H10 H10 H 0 1 N N N N N N 18.874 11.499 -0.231 -3.697 -2.057 1.609 H10 EJO 26
EJO H11 H11 H 0 1 N N N N N N 15.237 8.930 1.007 -4.513 0.140 0.629 H11 EJO 27
EJO H12 H12 H 0 1 N N N N N N 16.039 9.124 2.603 -3.353 1.463 0.901 H12 EJO 28
EJO H13 H13 H 0 1 N N N N N N 14.097 10.643 2.382 -3.228 1.856 -1.544 H13 EJO 29
EJO H14 H14 H 0 1 N N N N N N 15.634 11.563 2.509 -4.388 0.534 -1.816 H14 EJO 30
EJO H15 H15 H 0 1 N N N N N N 14.832 11.369 0.913 -4.902 2.006 -0.957 H15 EJO 31
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EJO CAB CAS SING N N 1
EJO CAS NBP SING N N 2
EJO OBB CBI SING N N 3
EJO OBB CBG SING N N 4
EJO CAP CBI DOUB Y N 5
EJO CAP CBE SING Y N 6
EJO OAE CBG DOUB N N 7
EJO NBP CBE SING N N 8
EJO NBP CAR SING N N 9
EJO CBI CBH SING Y N 10
EJO CBG CBF SING N N 11
EJO CBE CAM DOUB Y N 12
EJO CAR CAA SING N N 13
EJO CBF CAQ DOUB N N 14
EJO CAM CAN SING Y N 15
EJO CBH CAQ SING N N 16
EJO CBH CAN DOUB Y N 17
EJO CBF H1 SING N N 18
EJO CAQ H2 SING N N 19
EJO CAP H3 SING N N 20
EJO CAN H4 SING N N 21
EJO CAM H5 SING N N 22
EJO CAS H6 SING N N 23
EJO CAS H7 SING N N 24
EJO CAB H8 SING N N 25
EJO CAB H9 SING N N 26
EJO CAB H10 SING N N 27
EJO CAR H11 SING N N 28
EJO CAR H12 SING N N 29
EJO CAA H13 SING N N 30
EJO CAA H14 SING N N 31
EJO CAA H15 SING N N 32
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EJO InChI InChI 1.03 InChI=1S/C13H15NO2/c1-3-14(4-2)11-7-5-10-6-8-13(15)16-12(10)9-11/h5-9H,3-4H2,1-2H3
EJO InChIKey InChI 1.03 QXAMGWKESXGGNV-UHFFFAOYSA-N
EJO SMILES_CANONICAL CACTVS 3.385 CCN(CC)c1ccc2C=CC(=O)Oc2c1
EJO SMILES CACTVS 3.385 CCN(CC)c1ccc2C=CC(=O)Oc2c1
EJO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCN(CC)c1ccc2c(c1)OC(=O)C=C2
EJO SMILES "OpenEye OEToolkits" 2.0.7 CCN(CC)c1ccc2c(c1)OC(=O)C=C2
#
_pdbx_chem_comp_identifier.comp_id EJO
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier 7-(diethylamino)chromen-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EJO 'Create component' 2020-01-08 PDBJ
EJO 'Initial release' 2020-02-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
EJO CBF C 12.195 1.880 1
EJO CAQ C 10.836 2.651 2
EJO CBG C 12.195 0.318 3
EJO OAE O 13.491 -0.437 4
EJO OBB O 10.836 -0.453 5
EJO CBI C 9.495 0.349 6
EJO CAP C 8.196 -0.401 7
EJO CBH C 9.495 1.849 8
EJO CAN C 8.196 2.599 9
EJO CAM C 6.897 1.849 10
EJO CBE C 6.897 0.349 11
EJO NBP N 5.598 -0.401 12
EJO CAS C 4.299 0.349 13
EJO CAB C 3.000 -0.401 14
EJO CAR C 5.598 -1.901 15
EJO CAA C 4.299 -2.651 16
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
EJO CAB CAS SINGLE NONE 1
EJO CAS NBP SINGLE NONE 2
EJO OBB CBI SINGLE NONE 3
EJO OBB CBG SINGLE NONE 4
EJO CAP CBI SINGLE NONE 5
EJO CAP CBE DOUBLE NONE 6
EJO OAE CBG DOUBLE NONE 7
EJO NBP CBE SINGLE NONE 8
EJO NBP CAR SINGLE NONE 9
EJO CBI CBH DOUBLE NONE 10
EJO CBG CBF SINGLE NONE 11
EJO CBE CAM SINGLE NONE 12
EJO CAR CAA SINGLE NONE 13
EJO CBF CAQ DOUBLE NONE 14
EJO CAM CAN DOUBLE NONE 15
EJO CBH CAQ SINGLE NONE 16
EJO CBH CAN SINGLE NONE 17
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
EJO MurckoScaffold S1 scaffold O=c1ccc2ccccc2o1 InChI=1S/C9H6O2/c10-9-6-5-7-3-1-2-4-8(7)11-9/h1-6H ZYGHJZDHTFUPRJ-UHFFFAOYSA-N
EJO phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
EJO CBF S1 1
EJO CAQ S1 1
EJO CBG S1 1
EJO OAE S1 1
EJO OBB S1 1
EJO CBI S1 1
EJO CAP S1 1
EJO CBH S1 1
EJO CAN S1 1
EJO CAM S1 1
EJO CBE S1 1
EJO CBI F1 1
EJO CAP F1 1
EJO CBE F1 1
EJO CAM F1 1
EJO CAN F1 1
EJO CBH F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id EJO
_pdbe_chem_comp_rdkit_properties.exactmw 217.110
_pdbe_chem_comp_rdkit_properties.amw 217.268
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 16
_pdbe_chem_comp_rdkit_properties.NumAtoms 31
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.308
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 115.374
_pdbe_chem_comp_rdkit_properties.tpsa 33.450
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.730
_pdbe_chem_comp_rdkit_properties.CrippenMR 63.123
_pdbe_chem_comp_rdkit_properties.chi0v 7.764
_pdbe_chem_comp_rdkit_properties.chi1v 4.033
_pdbe_chem_comp_rdkit_properties.chi2v 1.696
_pdbe_chem_comp_rdkit_properties.chi3v 1.696
_pdbe_chem_comp_rdkit_properties.chi4v 1.028
_pdbe_chem_comp_rdkit_properties.chi0n 22.764
_pdbe_chem_comp_rdkit_properties.chi1n 11.533
_pdbe_chem_comp_rdkit_properties.chi2n 1.696
_pdbe_chem_comp_rdkit_properties.chi3n 1.696
_pdbe_chem_comp_rdkit_properties.chi4n 1.028
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.770
_pdbe_chem_comp_rdkit_properties.kappa1 2.726
_pdbe_chem_comp_rdkit_properties.kappa2 4.390
_pdbe_chem_comp_rdkit_properties.kappa3 1.935
_pdbe_chem_comp_rdkit_properties.Phi 0.748
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
EJO UniChem ChEMBL CHEMBL1430816
EJO UniChem PDBe EJO
EJO UniChem ChEBI 120776
EJO UniChem ZINC ZINC000000058059
EJO UniChem eMolecules 1173872
EJO UniChem SureChEMBL SCHEMBL142022
EJO UniChem LINCS LSM-32218
EJO UniChem ACTor 20571-42-0
EJO UniChem BindingDb 50242749
EJO UniChem 'EPA CompTox Dashboard' DTXSID9066627
EJO UniChem ChemicalBook CB6278911
EJO UniChem Nikkaji J280.622C
EJO UniChem 'PubChem TPHARMA' 15220359
EJO UniChem PubChem 88598
EJO UniChem Mcule MCULE-6006466834
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
EJO CBF 4.385 0.332 1.649 ETKDGv3 1
EJO CAQ 3.905 0.201 0.410 ETKDGv3 2
EJO CBG 3.444 0.396 2.776 ETKDGv3 3
EJO OAE 3.864 0.520 3.956 ETKDGv3 4
EJO OBB 2.071 0.318 2.521 ETKDGv3 5
EJO CBI 1.588 0.181 1.212 ETKDGv3 6
EJO CAP 0.132 0.100 0.975 ETKDGv3 7
EJO CBH 2.446 0.121 0.170 ETKDGv3 8
EJO CAN 1.920 -0.024 -1.205 ETKDGv3 9
EJO CAM 0.600 -0.097 -1.415 ETKDGv3 10
EJO CBE -0.349 -0.033 -0.275 ETKDGv3 11
EJO NBP -1.768 -0.123 -0.509 ETKDGv3 12
EJO CAS -2.313 -1.275 -1.241 ETKDGv3 13
EJO CAB -2.195 -2.544 -0.404 ETKDGv3 14
EJO CAR -2.660 0.948 -0.040 ETKDGv3 15
EJO CAA -2.423 2.227 -0.835 ETKDGv3 16
EJO H1 5.453 0.391 1.820 ETKDGv3 17
EJO H2 4.592 0.153 -0.426 ETKDGv3 18
EJO H3 -0.539 0.126 1.824 ETKDGv3 19
EJO H4 2.601 -0.065 -2.045 ETKDGv3 20
EJO H5 0.228 -0.184 -2.427 ETKDGv3 21
EJO H6 -1.772 -1.411 -2.201 ETKDGv3 22
EJO H7 -3.383 -1.115 -1.495 ETKDGv3 23
EJO H8 -2.729 -2.413 0.561 ETKDGv3 24
EJO H9 -1.128 -2.776 -0.203 ETKDGv3 25
EJO H10 -2.647 -3.397 -0.952 ETKDGv3 26
EJO H11 -2.492 1.144 1.040 ETKDGv3 27
EJO H12 -3.726 0.654 -0.150 ETKDGv3 28
EJO H13 -2.585 2.037 -1.917 ETKDGv3 29
EJO H14 -1.386 2.592 -0.678 ETKDGv3 30
EJO H15 -3.131 3.013 -0.498 ETKDGv3 31
#