data_EKF
#
_chem_comp.id EKF
_chem_comp.name
N-(2,3-dihydro-1-benzofuran-4-ylmethyl)-8-[4-[(dimethylamino)methyl]phenyl]-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H24 N6 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-01-08
_chem_comp.pdbx_modified_date 2022-04-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 400.476
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code EKF
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6LO5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EKF C1 C1 C 0 1 Y N N N N N 30.990 -75.104 5.924 0.680 1.445 -0.307 C1 EKF 1
EKF C2 C2 C 0 1 Y N N N N N 31.624 -75.455 7.061 1.535 0.357 -0.253 C2 EKF 2
EKF C3 C3 C 0 1 Y N N N N N 32.097 -74.336 7.919 0.937 -0.979 -0.287 C3 EKF 3
EKF C12 C4 C 0 1 N N N N N N 30.156 -71.134 5.018 -3.378 1.169 -0.537 C12 EKF 4
EKF C13 C5 C 0 1 Y N N N N N 28.649 -71.332 5.203 -4.832 0.782 -0.619 C13 EKF 5
EKF C14 C6 C 0 1 Y N N N N N 27.922 -70.537 6.118 -5.486 0.799 -1.838 C14 EKF 6
EKF C15 C7 C 0 1 Y N N N N N 26.519 -70.640 6.242 -6.820 0.442 -1.907 C15 EKF 7
EKF C16 C8 C 0 1 Y N N N N N 25.804 -71.571 5.467 -7.502 0.072 -0.767 C16 EKF 8
EKF C17 C9 C 0 1 Y N N N N N 26.538 -72.366 4.556 -6.853 0.056 0.465 C17 EKF 9
EKF C18 C10 C 0 1 Y N N N N N 27.929 -72.257 4.430 -5.509 0.405 0.519 C18 EKF 10
EKF C20 C11 C 0 1 N N N N N N 27.014 -73.868 2.939 -6.232 -0.553 2.575 C20 EKF 11
EKF C21 C12 C 0 1 N N N N N N 28.370 -73.262 3.375 -5.074 0.273 1.966 C21 EKF 12
EKF C22 C13 C 0 1 Y N N N N N 30.776 -77.822 7.319 3.567 1.133 0.963 C22 EKF 13
EKF C23 C14 C 0 1 Y N N N N N 30.975 -79.190 7.600 4.935 1.299 1.039 C23 EKF 14
EKF C24 C15 C 0 1 Y N N N N N 32.262 -79.646 7.938 5.745 0.879 -0.000 C24 EKF 15
EKF C25 C16 C 0 1 Y N N N N N 33.329 -78.728 8.032 5.190 0.290 -1.122 C25 EKF 16
EKF C26 C17 C 0 1 Y N N N N N 33.131 -77.360 7.762 3.824 0.117 -1.210 C26 EKF 17
EKF C27 C18 C 0 1 N N N N N N 32.491 -81.138 8.260 7.238 1.064 0.089 C27 EKF 18
EKF C29 C19 C 0 1 N N N N N N 34.397 -81.634 6.637 7.687 -1.304 -0.143 C29 EKF 19
EKF C30 C20 C 0 1 N N N N N N 32.026 -82.272 6.037 9.256 0.117 1.034 C30 EKF 20
EKF C9 C21 C 0 1 Y N N N N N 32.372 -72.407 8.537 -0.711 -2.406 -0.383 C9 EKF 21
EKF O19 O1 O 0 1 N N N N N N 25.934 -73.301 3.740 -7.332 -0.254 1.701 O19 EKF 22
EKF N8 N1 N 0 1 Y N N N N N 32.950 -73.105 9.430 0.429 -3.043 -0.315 N8 EKF 23
EKF N28 N2 N 0 1 N N N N N N 33.005 -81.939 7.108 7.842 -0.120 0.714 N28 EKF 24
EKF N6 N3 N 0 1 Y N N N N N 30.782 -73.701 5.676 -0.637 1.258 -0.381 N6 EKF 25
EKF C5 C22 C 0 1 Y N N N N N 31.154 -72.772 6.492 -1.186 0.065 -0.407 C5 EKF 26
EKF N7 N4 N 0 1 Y N N N N N 32.773 -74.451 8.996 1.406 -2.206 -0.257 N7 EKF 27
EKF C10 C23 C 0 1 Y N N N N N 31.850 -76.912 7.401 3.002 0.539 -0.165 C10 EKF 28
EKF N11 N5 N 0 1 N N N N N N 30.898 -71.506 6.214 -2.553 -0.040 -0.484 N11 EKF 29
EKF N4 N6 N 0 1 Y N N N N N 31.833 -73.110 7.579 -0.434 -1.072 -0.370 N4 EKF 30
EKF H1 H1 H 0 1 N N N N N N 30.649 -75.851 5.222 1.082 2.447 -0.284 H1 EKF 31
EKF H2 H2 H 0 1 N N N N N N 30.497 -71.757 4.178 -3.109 1.755 -1.416 H2 EKF 32
EKF H3 H3 H 0 1 N N N N N N 30.352 -70.075 4.792 -3.210 1.764 0.361 H3 EKF 33
EKF H4 H4 H 0 1 N N N N N N 28.454 -69.832 6.739 -4.956 1.091 -2.733 H4 EKF 34
EKF H5 H5 H 0 1 N N N N N N 25.992 -70.001 6.935 -7.330 0.452 -2.859 H5 EKF 35
EKF H6 H6 H 0 1 N N N N N N 24.733 -71.675 5.564 -8.544 -0.205 -0.829 H6 EKF 36
EKF H7 H7 H 0 1 N N N N N N 26.838 -73.641 1.877 -6.001 -1.618 2.549 H7 EKF 37
EKF H8 H8 H 0 1 N N N N N N 29.033 -74.028 3.803 -4.129 -0.264 2.044 H8 EKF 38
EKF H9 H9 H 0 1 N N N N N N 29.794 -77.469 7.039 2.937 1.457 1.777 H9 EKF 39
EKF H10 H10 H 0 1 N N N N N N 30.146 -79.881 7.556 5.374 1.759 1.913 H10 EKF 40
EKF H11 H11 H 0 1 N N N N N N 34.311 -79.079 8.315 5.827 -0.036 -1.931 H11 EKF 41
EKF H12 H12 H 0 1 N N N N N N 33.954 -76.664 7.832 3.392 -0.343 -2.087 H12 EKF 42
EKF H13 H13 H 0 1 N N N N N N 31.533 -81.573 8.583 7.648 1.196 -0.912 H13 EKF 43
EKF H14 H14 H 0 1 N N N N N N 33.220 -81.206 9.081 7.459 1.945 0.692 H14 EKF 44
EKF H15 H15 H 0 1 N N N N N N 35.035 -81.403 7.503 8.080 -2.180 0.373 H15 EKF 45
EKF H16 H16 H 0 1 N N N N N N 34.803 -82.507 6.105 6.631 -1.456 -0.365 H16 EKF 46
EKF H17 H17 H 0 1 N N N N N N 34.373 -80.769 5.958 8.236 -1.153 -1.072 H17 EKF 47
EKF H18 H18 H 0 1 N N N N N N 31.044 -82.477 6.488 9.802 0.346 0.119 H18 EKF 48
EKF H19 H19 H 0 1 N N N N N N 31.940 -81.424 5.342 9.336 0.956 1.726 H19 EKF 49
EKF H20 H20 H 0 1 N N N N N N 32.371 -83.161 5.489 9.678 -0.776 1.496 H20 EKF 50
EKF H21 H21 H 0 1 N N N N N N 32.331 -71.328 8.569 -1.691 -2.855 -0.442 H21 EKF 51
EKF H23 H23 H 0 1 N N N N N N 31.783 -71.044 6.154 -2.971 -0.914 -0.504 H23 EKF 52
EKF H24 H24 H 0 1 N N N N N N 27.040 -74.958 3.081 -6.445 -0.228 3.593 H24 EKF 53
EKF H25 H25 H 0 1 N N N N N N 28.877 -72.766 2.534 -5.004 1.253 2.440 H25 EKF 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EKF C20 C21 SING N N 1
EKF C20 O19 SING N N 2
EKF C21 C18 SING N N 3
EKF O19 C17 SING N N 4
EKF C18 C17 SING Y N 5
EKF C18 C13 DOUB Y N 6
EKF C17 C16 DOUB Y N 7
EKF C12 C13 SING N N 8
EKF C12 N11 SING N N 9
EKF C13 C14 SING Y N 10
EKF C16 C15 SING Y N 11
EKF N6 C1 SING Y N 12
EKF N6 C5 DOUB Y N 13
EKF C1 C2 DOUB Y N 14
EKF C30 N28 SING N N 15
EKF C14 C15 DOUB Y N 16
EKF N11 C5 SING N N 17
EKF C5 N4 SING Y N 18
EKF C29 N28 SING N N 19
EKF C2 C10 SING N N 20
EKF C2 C3 SING Y N 21
EKF N28 C27 SING N N 22
EKF C22 C10 DOUB Y N 23
EKF C22 C23 SING Y N 24
EKF C10 C26 SING Y N 25
EKF N4 C3 SING Y N 26
EKF N4 C9 SING Y N 27
EKF C23 C24 DOUB Y N 28
EKF C26 C25 DOUB Y N 29
EKF C3 N7 DOUB Y N 30
EKF C24 C25 SING Y N 31
EKF C24 C27 SING N N 32
EKF C9 N8 DOUB Y N 33
EKF N7 N8 SING Y N 34
EKF C1 H1 SING N N 35
EKF C12 H2 SING N N 36
EKF C12 H3 SING N N 37
EKF C14 H4 SING N N 38
EKF C15 H5 SING N N 39
EKF C16 H6 SING N N 40
EKF C20 H7 SING N N 41
EKF C21 H8 SING N N 42
EKF C22 H9 SING N N 43
EKF C23 H10 SING N N 44
EKF C25 H11 SING N N 45
EKF C26 H12 SING N N 46
EKF C27 H13 SING N N 47
EKF C27 H14 SING N N 48
EKF C29 H15 SING N N 49
EKF C29 H16 SING N N 50
EKF C29 H17 SING N N 51
EKF C30 H18 SING N N 52
EKF C30 H19 SING N N 53
EKF C30 H20 SING N N 54
EKF C9 H21 SING N N 55
EKF N11 H23 SING N N 56
EKF C20 H24 SING N N 57
EKF C21 H25 SING N N 58
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EKF InChI InChI 1.03 InChI=1S/C23H24N6O/c1-28(2)14-16-6-8-17(9-7-16)20-13-25-23(29-15-26-27-22(20)29)24-12-18-4-3-5-21-19(18)10-11-30-21/h3-9,13,15H,10-12,14H2,1-2H3,(H,24,25)
EKF InChIKey InChI 1.03 KCSVXFVJXLVYFS-UHFFFAOYSA-N
EKF SMILES_CANONICAL CACTVS 3.385 CN(C)Cc1ccc(cc1)c2cnc(NCc3cccc4OCCc34)n5cnnc25
EKF SMILES CACTVS 3.385 CN(C)Cc1ccc(cc1)c2cnc(NCc3cccc4OCCc34)n5cnnc25
EKF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CN(C)Cc1ccc(cc1)c2cnc(n3c2nnc3)NCc4cccc5c4CCO5
EKF SMILES "OpenEye OEToolkits" 2.0.7 CN(C)Cc1ccc(cc1)c2cnc(n3c2nnc3)NCc4cccc5c4CCO5
#
_pdbx_chem_comp_identifier.comp_id EKF
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
~{N}-(2,3-dihydro-1-benzofuran-4-ylmethyl)-8-[4-[(dimethylamino)methyl]phenyl]-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EKF 'Create component' 2020-01-08 PDBJ
EKF 'Initial release' 2022-04-13 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
EKF C1 C 6.594 0.000 1
EKF C2 C 7.893 0.750 2
EKF C3 C 9.192 0.000 3
EKF C12 C 6.594 -4.500 4
EKF C13 C 6.594 -6.000 5
EKF C14 C 7.893 -6.750 6
EKF C15 C 7.893 -8.250 7
EKF C16 C 6.594 -9.000 8
EKF C17 C 5.295 -8.250 9
EKF C18 C 5.295 -6.750 10
EKF C20 C 3.000 -7.500 11
EKF C21 C 3.875 -6.293 12
EKF C22 C 6.594 3.000 13
EKF C23 C 6.594 4.500 14
EKF C24 C 7.893 5.250 15
EKF C25 C 9.192 4.500 16
EKF C26 C 9.192 3.000 17
EKF C27 C 7.893 6.750 18
EKF C29 C 5.295 6.750 19
EKF C30 C 6.594 9.000 20
EKF C9 C 10.611 -1.957 21
EKF O19 O 3.875 -8.707 22
EKF N8 N 11.487 -0.750 23
EKF N28 N 6.594 7.500 24
EKF N6 N 6.594 -1.500 25
EKF C5 C 7.893 -2.250 26
EKF N7 N 10.611 0.457 27
EKF C10 C 7.893 2.250 28
EKF N11 N 7.893 -3.750 29
EKF N4 N 9.192 -1.500 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
EKF C20 C21 SINGLE NONE 1
EKF C20 O19 SINGLE NONE 2
EKF C21 C18 SINGLE NONE 3
EKF O19 C17 SINGLE NONE 4
EKF C18 C17 DOUBLE NONE 5
EKF C18 C13 SINGLE NONE 6
EKF C17 C16 SINGLE NONE 7
EKF C12 C13 SINGLE NONE 8
EKF C12 N11 SINGLE NONE 9
EKF C13 C14 DOUBLE NONE 10
EKF C16 C15 DOUBLE NONE 11
EKF N6 C1 SINGLE NONE 12
EKF N6 C5 DOUBLE NONE 13
EKF C1 C2 DOUBLE NONE 14
EKF C30 N28 SINGLE NONE 15
EKF C14 C15 SINGLE NONE 16
EKF N11 C5 SINGLE NONE 17
EKF C5 N4 SINGLE NONE 18
EKF C29 N28 SINGLE NONE 19
EKF C2 C10 SINGLE NONE 20
EKF C2 C3 SINGLE NONE 21
EKF N28 C27 SINGLE NONE 22
EKF C22 C10 DOUBLE NONE 23
EKF C22 C23 SINGLE NONE 24
EKF C10 C26 SINGLE NONE 25
EKF N4 C3 SINGLE NONE 26
EKF N4 C9 SINGLE NONE 27
EKF C23 C24 DOUBLE NONE 28
EKF C26 C25 DOUBLE NONE 29
EKF C3 N7 DOUBLE NONE 30
EKF C24 C25 SINGLE NONE 31
EKF C24 C27 SINGLE NONE 32
EKF C9 N8 DOUBLE NONE 33
EKF N7 N8 SINGLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
EKF MurckoScaffold S1 scaffold c1ccc(-c2cnc(NCc3cccc4c3CCO4)n3cnnc23)cc1 InChI=1S/C20H17N5O/c1-2-5-14(6-3-1)17-12-22-20(25-13-23-24-19(17)25)21-11-15-7-4-8-18-16(15)9-10-26-18/h1-8,12-13H,9-11H2,(H,21,22) OIAQKXJXJLUAPX-UHFFFAOYSA-N
EKF benzofuran F1 fragment c1ccc2c(c1)CCO2 InChI=1S/C8H8O/c1-2-4-8-7(3-1)5-6-9-8/h1-4H,5-6H2 HBEDSQVIWPRPAY-UHFFFAOYSA-N
EKF phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
EKF pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
EKF Z54628578 F4 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
EKF C1 S1 1
EKF C2 S1 1
EKF C3 S1 1
EKF C12 S1 1
EKF C13 S1 1
EKF C14 S1 1
EKF C15 S1 1
EKF C16 S1 1
EKF C17 S1 1
EKF C18 S1 1
EKF C20 S1 1
EKF C21 S1 1
EKF C22 S1 1
EKF C23 S1 1
EKF C24 S1 1
EKF C25 S1 1
EKF C26 S1 1
EKF C9 S1 1
EKF O19 S1 1
EKF N8 S1 1
EKF N6 S1 1
EKF C5 S1 1
EKF N7 S1 1
EKF C10 S1 1
EKF N11 S1 1
EKF N4 S1 1
EKF C17 F1 1
EKF C18 F1 1
EKF C21 F1 1
EKF C20 F1 1
EKF O19 F1 1
EKF C13 F1 1
EKF C14 F1 1
EKF C15 F1 1
EKF C16 F1 1
EKF C13 F2 1
EKF C18 F2 1
EKF C17 F2 1
EKF C16 F2 1
EKF C15 F2 1
EKF C14 F2 1
EKF C22 F2 2
EKF C10 F2 2
EKF C26 F2 2
EKF C25 F2 2
EKF C24 F2 2
EKF C23 F2 2
EKF C2 F3 1
EKF C1 F3 1
EKF N6 F3 1
EKF C5 F3 1
EKF N4 F3 1
EKF C3 F3 1
EKF C12 F4 1
EKF N11 F4 1
EKF C5 F4 1
EKF N6 F4 1
EKF C1 F4 1
EKF C2 F4 1
EKF C3 F4 1
EKF N4 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id EKF
_pdbe_chem_comp_rdkit_properties.exactmw 400.201
_pdbe_chem_comp_rdkit_properties.amw 400.486
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.261
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 208.676
_pdbe_chem_comp_rdkit_properties.tpsa 67.580
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.799
_pdbe_chem_comp_rdkit_properties.CrippenMR 111.920
_pdbe_chem_comp_rdkit_properties.chi0v 14.592
_pdbe_chem_comp_rdkit_properties.chi1v 8.042
_pdbe_chem_comp_rdkit_properties.chi2v 3.729
_pdbe_chem_comp_rdkit_properties.chi3v 3.729
_pdbe_chem_comp_rdkit_properties.chi4v 2.464
_pdbe_chem_comp_rdkit_properties.chi0n 38.592
_pdbe_chem_comp_rdkit_properties.chi1n 19.989
_pdbe_chem_comp_rdkit_properties.chi2n 3.729
_pdbe_chem_comp_rdkit_properties.chi3n 3.729
_pdbe_chem_comp_rdkit_properties.chi4n 2.464
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.450
_pdbe_chem_comp_rdkit_properties.kappa1 5.824
_pdbe_chem_comp_rdkit_properties.kappa2 7.759
_pdbe_chem_comp_rdkit_properties.kappa3 3.480
_pdbe_chem_comp_rdkit_properties.Phi 1.506
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
EKF UniChem ChEMBL CHEMBL5178353
EKF UniChem PDBe EKF
EKF UniChem SureChEMBL SCHEMBL17865019
EKF UniChem PubChem 121432925
EKF UniChem BindingDb 291696
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
EKF C1 0.611 -0.364 0.953 ETKDGv3 1
EKF C2 1.234 0.463 0.084 ETKDGv3 2
EKF C3 0.373 1.149 -0.893 ETKDGv3 3
EKF C12 -3.989 0.908 0.157 ETKDGv3 4
EKF C13 -5.300 0.457 -0.426 ETKDGv3 5
EKF C14 -5.565 0.609 -1.742 ETKDGv3 6
EKF C15 -6.846 0.116 -2.317 ETKDGv3 7
EKF C16 -7.747 -0.501 -1.535 ETKDGv3 8
EKF C17 -7.435 -0.676 -0.108 ETKDGv3 9
EKF C18 -6.309 -0.237 0.411 ETKDGv3 10
EKF C20 -7.596 -1.277 2.101 ETKDGv3 11
EKF C21 -6.255 -0.550 1.867 ETKDGv3 12
EKF C22 3.361 0.856 1.254 ETKDGv3 13
EKF C23 4.827 1.037 1.263 ETKDGv3 14
EKF C24 5.528 0.975 0.118 ETKDGv3 15
EKF C25 4.810 0.733 -1.157 ETKDGv3 16
EKF C26 3.482 0.571 -1.166 ETKDGv3 17
EKF C27 7.032 1.153 0.118 ETKDGv3 18
EKF C29 7.547 -0.749 1.585 ETKDGv3 19
EKF C30 7.555 -1.057 -0.819 ETKDGv3 20
EKF C9 -1.437 1.571 -2.046 ETKDGv3 21
EKF O19 -8.235 -1.294 0.829 ETKDGv3 22
EKF N8 -0.422 2.031 -2.706 ETKDGv3 23
EKF N28 7.787 -0.110 0.282 ETKDGv3 24
EKF N6 -0.823 -0.572 0.913 ETKDGv3 25
EKF C5 -1.609 0.066 0.089 ETKDGv3 26
EKF N7 0.744 1.751 -1.973 ETKDGv3 27
EKF C10 2.706 0.639 0.098 ETKDGv3 28
EKF N11 -3.019 -0.184 0.109 ETKDGv3 29
EKF N4 -1.023 1.010 -0.810 ETKDGv3 30
EKF H1 1.189 -0.920 1.681 ETKDGv3 31
EKF H2 -3.615 1.801 -0.384 ETKDGv3 32
EKF H3 -4.133 1.215 1.214 ETKDGv3 33
EKF H4 -4.849 1.087 -2.397 ETKDGv3 34
EKF H5 -7.049 0.254 -3.371 ETKDGv3 35
EKF H6 -8.680 -0.866 -1.945 ETKDGv3 36
EKF H7 -7.427 -2.318 2.452 ETKDGv3 37
EKF H8 -5.393 -1.215 2.090 ETKDGv3 38
EKF H9 2.823 0.921 2.192 ETKDGv3 39
EKF H10 5.326 1.219 2.207 ETKDGv3 40
EKF H11 5.361 0.677 -2.087 ETKDGv3 41
EKF H12 2.982 0.366 -2.104 ETKDGv3 42
EKF H13 7.328 1.866 0.919 ETKDGv3 43
EKF H14 7.342 1.643 -0.832 ETKDGv3 44
EKF H15 8.274 -1.575 1.738 ETKDGv3 45
EKF H16 7.698 -0.018 2.409 ETKDGv3 46
EKF H17 6.519 -1.167 1.650 ETKDGv3 47
EKF H18 6.526 -1.476 -0.785 ETKDGv3 48
EKF H19 7.716 -0.559 -1.799 ETKDGv3 49
EKF H20 8.280 -1.896 -0.751 ETKDGv3 50
EKF H21 -2.453 1.605 -2.410 ETKDGv3 51
EKF H23 -3.329 -1.110 0.483 ETKDGv3 52
EKF H24 -8.224 -0.725 2.832 ETKDGv3 53
EKF H25 -6.197 0.385 2.463 ETKDGv3 54
#