data_EMK
#
_chem_comp.id EMK
_chem_comp.name
"(2R,3S,4R,5R,8R,10R,11R,12S,13S,14R)-2-ethyl-3,4,10-trihydroxy-3,5,6,8,10,12,14-heptamethyl-15-oxo-11-[(3,4,6-trideoxy-3-{[3-(1-{(1S,2R)-1-(fluoromethyl)-2-hydroxy-2-[4-(methylsulfonyl)phenyl]ethyl}-1H-1,2,3-triazol-4-yl)propyl](methyl)amino}-beta-D-xylo-hexopyranosyl)oxy]-1-oxa-6-azacyclopentadecan-13-yl 2,6-dideoxy-3-C-methyl-3-O-methyl-alpha-L-ribo-hexopyranoside"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C52 H88 F N5 O15 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-09-20
_chem_comp.pdbx_modified_date 2012-06-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 1074.343
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code EMK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3OW2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EMK C1 C1 C 0 1 N N N N N N 68.595 137.219 91.189 6.977 -1.427 -2.467 C1 EMK 1
EMK F1 F1 F 0 1 N N N N N N 62.172 120.906 96.938 -10.961 -1.468 1.485 F1 EMK 2
EMK S1 S1 S 0 1 N N N N N N 70.489 120.183 101.781 -15.018 -2.221 -1.786 S1 EMK 3
EMK C2 C2 C 0 1 N N R N N N 68.280 136.665 92.658 5.491 -1.371 -2.657 C2 EMK 4
EMK C3 C3 C 0 1 N N S N N N 68.564 135.072 92.421 4.899 -0.270 -1.774 C3 EMK 5
EMK C4 C4 C 0 1 N N S N N N 67.323 134.228 92.428 3.379 -0.422 -1.662 C4 EMK 6
EMK C5 C5 C 0 1 N N R N N N 67.582 132.660 92.067 2.920 -0.390 -0.211 C5 EMK 7
EMK C6 C6 C 0 1 N N R N N N 66.968 132.469 90.420 3.096 -1.710 0.534 C6 EMK 8
EMK C7 C7 C 0 1 N N N N N N 65.420 132.981 90.488 4.552 -1.852 0.964 C7 EMK 9
EMK C8 C8 C 0 1 N N R N N N 64.897 132.875 89.002 4.710 -2.568 2.304 C8 EMK 10
EMK C9 C9 C 0 1 N N N N N N 65.140 134.556 88.726 6.168 -2.397 2.762 C9 EMK 11
EMK N9 N9 N 0 1 N N N N N N 64.837 135.157 87.393 6.943 -3.637 2.474 N9 EMK 12
EMK C10 C10 C 0 1 N N R N N N 71.180 134.408 93.035 5.876 1.912 -1.503 C10 EMK 13
EMK C12 C12 C 0 1 N N R N N N 65.151 136.840 87.411 8.386 -3.315 2.315 C12 EMK 14
EMK C13 C13 C 0 1 N N R N N N 66.437 137.447 87.926 8.924 -3.587 0.928 C13 EMK 15
EMK C14 C14 C 0 1 N N S N N N 66.215 138.632 89.254 8.435 -2.663 -0.168 C14 EMK 16
EMK C15 C15 C 0 1 N N R N N N 67.901 139.057 89.559 7.975 -3.418 -1.421 C15 EMK 17
EMK C16 C16 C 0 1 N N N N N N 69.184 137.402 93.773 5.195 -1.070 -4.132 C16 EMK 18
EMK C17 C17 C 0 1 N N N N N N 66.444 134.440 93.814 2.733 0.782 -2.382 C17 EMK 19
EMK C18 C18 C 0 1 N N N N N N 67.100 130.900 89.870 2.678 -2.890 -0.345 C18 EMK 20
EMK C19 C19 C 0 1 N N N N N N 63.335 132.587 89.007 4.344 -4.041 2.171 C19 EMK 21
EMK C20 C20 C 0 1 N N N N N N 64.762 137.374 85.794 8.790 -1.973 2.882 C20 EMK 22
EMK C21 C21 C 0 1 N N N N N N 71.992 133.887 94.414 6.338 3.123 -2.316 C21 EMK 23
EMK C23 C23 C 0 1 N N N N N N 65.415 137.897 90.533 9.618 -1.758 -0.578 C23 EMK 24
EMK C24 C24 C 0 1 N N N N N N 68.293 140.629 89.278 6.694 -4.203 -1.125 C24 EMK 25
EMK C25 C25 C 0 1 N N N N N N 69.000 141.145 88.134 6.319 -5.046 -2.345 C25 EMK 26
EMK C26 C26 C 0 1 N N R N N N 71.579 132.283 94.778 7.042 4.122 -1.395 C26 EMK 27
EMK C28 C28 C 0 1 N N S N N N 71.874 131.341 93.555 6.146 4.492 -0.218 C28 EMK 28
EMK C30 C30 C 0 1 N N S N N N 71.018 131.850 92.198 5.476 3.298 0.444 C30 EMK 29
EMK C32 C32 C 0 1 N N N N N N 71.279 130.972 90.957 6.392 2.639 1.473 C32 EMK 30
EMK C34 C34 C 0 1 N N N N N N 72.435 131.844 96.103 8.385 3.567 -0.928 C34 EMK 31
EMK C35 C35 C 0 1 N N N N N N 69.294 132.663 96.277 8.125 5.113 -3.303 C35 EMK 32
EMK C38 C38 C 0 1 N N N N N N 65.730 134.387 86.302 6.951 -4.373 3.809 C38 EMK 33
EMK C39 C39 C 0 1 N N S N N N 67.241 130.843 93.672 1.277 1.265 0.367 C39 EMK 34
EMK C40 C40 C 0 1 N N R N N N 65.822 130.559 94.349 -0.216 1.584 0.255 C40 EMK 35
EMK O41 O41 O 0 1 N N N N N N 67.741 129.631 92.952 1.666 1.295 1.742 O41 EMK 36
EMK O42 O42 O 0 1 N N N N N N 67.088 131.954 92.801 1.529 -0.034 -0.172 O42 EMK 37
EMK C43 C43 C 0 1 N N S N N N 66.003 129.316 95.386 -0.488 2.952 0.888 C43 EMK 38
EMK O44 O44 O 0 1 N N N N N N 65.373 131.776 95.037 -0.596 1.612 -1.123 O44 EMK 39
EMK C45 C45 C 0 1 N N N N N N 66.538 128.045 94.500 -0.005 2.934 2.342 C45 EMK 40
EMK N46 N46 N 0 1 N N N N N N 64.636 128.917 96.164 -1.929 3.233 0.852 N46 EMK 41
EMK C47 C47 C 0 1 N N R N N N 67.915 128.442 93.771 1.480 2.563 2.374 C47 EMK 42
EMK C48 C48 C 0 1 N N N N N N 68.448 127.287 92.883 1.954 2.484 3.826 C48 EMK 43
EMK C50 C50 C 0 1 N N N N N N 63.967 130.001 97.025 -2.204 4.624 1.235 C50 EMK 44
EMK O70 O70 O 0 1 N N N N N N 69.010 136.394 90.101 7.539 -0.355 -2.279 O70 EMK 45
EMK O71 O71 O 0 1 N N N N N N 69.637 134.574 93.411 5.190 1.002 -2.372 O71 EMK 46
EMK O72 O72 O 0 1 N N N N N N 68.051 133.162 89.446 2.249 -1.692 1.696 O72 EMK 47
EMK O73 O73 O 0 1 N N N N N N 67.122 138.330 87.024 8.753 -4.964 0.591 O73 EMK 48
EMK O74 O74 O 0 1 N N N N N N 65.241 139.813 88.711 7.365 -1.829 0.271 O74 EMK 49
EMK O75 O75 O 0 1 N N N N N N 68.395 138.696 90.975 7.726 -2.508 -2.503 O75 EMK 50
EMK O76 O76 O 0 1 N N N N N N 70.012 131.989 95.159 7.298 5.319 -2.157 O76 EMK 51
EMK O77 O77 O 0 1 N N N N N N 71.464 129.835 93.961 5.138 5.410 -0.668 O77 EMK 52
EMK O78 O78 O 0 1 N N N N N N 71.399 133.323 91.816 4.984 2.347 -0.484 O78 EMK 53
EMK C81 C81 C 0 1 N N N N N N 65.162 127.826 97.125 -2.670 2.295 1.707 C81 EMK 54
EMK N81 N81 N 0 1 Y N N N N N 64.605 121.930 98.183 -8.499 1.249 1.632 N81 EMK 55
EMK C82 C82 C 0 1 N N N N N N 64.594 126.392 96.957 -4.171 2.452 1.455 C82 EMK 56
EMK N82 N82 N 0 1 Y N N N N N 65.679 121.912 97.364 -8.360 2.500 1.900 N82 EMK 57
EMK C83 C83 C 0 1 N N S N N N 63.873 120.692 98.642 -9.751 0.584 1.263 C83 EMK 58
EMK N83 N83 N 0 1 Y N N N N N 66.128 123.137 97.116 -7.132 2.760 2.182 N83 EMK 59
EMK C84 C84 C 0 1 N N N N N N 62.354 120.659 98.348 -9.765 -0.834 1.838 C84 EMK 60
EMK C85 C85 C 0 1 N N R N N N 64.181 120.414 100.176 -9.862 0.517 -0.262 C85 EMK 61
EMK C86 C86 C 0 1 Y N N N N N 65.728 120.419 100.585 -11.150 -0.167 -0.642 C86 EMK 62
EMK C87 C87 C 0 1 Y N N N N N 66.427 121.531 101.262 -11.159 -1.523 -0.912 C87 EMK 63
EMK C88 C88 C 0 1 Y N N N N N 67.868 121.469 101.618 -12.340 -2.150 -1.261 C88 EMK 64
EMK C89 C89 C 0 1 Y N N N N N 68.670 120.278 101.313 -13.513 -1.421 -1.340 C89 EMK 65
EMK C90 C90 C 0 1 Y N N N N N 68.005 119.158 100.640 -13.503 -0.066 -1.071 C90 EMK 66
EMK C91 C91 C 0 1 Y N N N N N 66.569 119.232 100.284 -12.323 0.561 -0.716 C91 EMK 67
EMK C92 C92 C 0 1 N N N N N N 70.760 120.323 103.605 -15.728 -2.761 -0.207 C92 EMK 68
EMK C93 C93 C 0 1 Y N N N N N 64.294 123.258 98.520 -7.289 0.654 1.745 C93 EMK 69
EMK C94 C94 C 0 1 N N N N N N 65.573 125.488 97.718 -4.942 1.476 2.346 C94 EMK 70
EMK O94 O94 O 0 1 N N N N N N 71.113 118.797 101.374 -15.807 -1.188 -2.360 O94 EMK 71
EMK C95 C95 C 0 1 Y N N N N N 65.313 123.977 97.797 -6.420 1.630 2.098 C95 EMK 72
EMK O95 O95 O 0 1 N N N N N N 71.176 121.460 101.248 -14.606 -3.341 -2.557 O95 EMK 73
EMK O96 O96 O 0 1 N N N N N N 63.454 121.356 101.042 -9.849 1.841 -0.799 O96 EMK 74
EMK H2 H2 H 0 1 N N N N N N 67.273 136.850 93.060 5.043 -2.331 -2.401 H2 EMK 75
EMK H3 H3 H 0 1 N N N N N N 68.957 134.957 91.400 5.345 -0.304 -0.789 H3 EMK 76
EMK H4 H4 H 0 1 N N N N N N 66.705 134.597 91.597 3.063 -1.321 -2.177 H4 EMK 77
EMK H5 H5 H 0 1 N N N N N N 68.648 132.399 92.137 3.468 0.401 0.312 H5 EMK 78
EMK H7 H7 H 0 1 N N N N N N 64.824 132.350 91.163 5.105 -2.403 0.204 H7 EMK 79
EMK H7A H7A H 0 1 N N N N N N 65.361 134.016 90.855 4.997 -0.851 1.056 H7A EMK 80
EMK H8 H8 H 0 1 N N N N N N 65.339 132.129 88.324 4.052 -2.103 3.053 H8 EMK 81
EMK H9 H9 H 0 1 N N N N N N 64.493 135.077 89.447 6.548 -1.553 2.201 H9 EMK 82
EMK H9A H9A H 0 1 N N N N N N 66.210 134.740 88.904 6.202 -2.189 3.822 H9A EMK 83
EMK H10 H10 H 0 1 N N N N N N 71.572 135.374 92.684 6.732 1.399 -1.069 H10 EMK 84
EMK H12 H12 H 0 1 N N N N N N 64.535 137.223 88.238 8.885 -4.078 2.986 H12 EMK 85
EMK H13 H13 H 0 1 N N N N N N 66.967 136.514 88.169 10.033 -3.439 0.990 H13 EMK 86
EMK H15 H15 H 0 1 N N N N N N 68.415 138.433 88.814 8.766 -4.124 -1.708 H15 EMK 87
EMK H16 H16 H 0 1 N N N N N N 68.942 136.998 94.767 5.619 -1.857 -4.756 H16 EMK 88
EMK H16A H16A H 0 0 N N N N N N 70.248 137.228 93.556 4.116 -1.027 -4.285 H16A EMK 89
EMK H16B H16B H 0 0 N N N N N N 68.978 138.482 93.756 5.639 -0.112 -4.404 H16B EMK 90
EMK H17 H17 H 0 1 N N N N N N 65.546 133.806 93.780 3.125 0.851 -3.397 H17 EMK 91
EMK H17A H17A H 0 0 N N N N N N 67.057 134.160 94.683 1.652 0.646 -2.419 H17A EMK 92
EMK H17B H17B H 0 0 N N N N N N 66.145 135.495 93.901 2.966 1.698 -1.839 H17B EMK 93
EMK H18 H18 H 0 1 N N N N N N 66.706 130.836 88.845 3.294 -2.910 -1.244 H18 EMK 94
EMK H18A H18A H 0 0 N N N N N N 68.158 130.597 89.875 2.813 -3.820 0.208 H18A EMK 95
EMK H18B H18B H 0 0 N N N N N N 66.524 130.232 90.527 1.630 -2.782 -0.624 H18B EMK 96
EMK H19 H19 H 0 1 N N N N N N 62.972 132.513 87.971 4.999 -4.513 1.439 H19 EMK 97
EMK H19A H19A H 0 0 N N N N N N 63.138 131.641 89.532 4.463 -4.534 3.136 H19A EMK 98
EMK H19B H19B H 0 0 N N N N N N 62.813 133.407 89.521 3.308 -4.130 1.843 H19B EMK 99
EMK H20 H20 H 0 1 N N N N N N 64.936 138.457 85.713 8.573 -1.949 3.950 H20 EMK 100
EMK H20A H20A H 0 0 N N N N N N 65.399 136.845 85.070 9.857 -1.817 2.724 H20A EMK 101
EMK H20B H20B H 0 0 N N N N N N 63.705 137.156 85.580 8.229 -1.183 2.380 H20B EMK 102
EMK H21 H21 H 0 1 N N N N N N 73.076 133.949 94.238 7.029 2.795 -3.094 H21 EMK 103
EMK H21A H21A H 0 0 N N N N N N 71.714 134.532 95.261 5.474 3.600 -2.781 H21A EMK 104
EMK H23 H23 H 0 1 N N N N N N 65.279 138.624 91.347 10.439 -2.375 -0.941 H23 EMK 105
EMK H23A H23A H 0 0 N N N N N N 64.432 137.539 90.193 9.298 -1.078 -1.368 H23A EMK 106
EMK H23B H23B H 0 0 N N N N N N 66.010 137.046 90.897 9.950 -1.181 0.285 H23B EMK 107
EMK H24 H24 H 0 1 N N N N N N 67.323 141.147 89.250 6.859 -4.857 -0.268 H24 EMK 108
EMK H351 H351 H 0 0 N N N N N N 68.928 140.905 90.133 5.885 -3.508 -0.901 H351 EMK 109
EMK H25 H25 H 0 1 N N N N N N 69.111 142.235 88.232 5.407 -5.605 -2.134 H25 EMK 110
EMK H25A H25A H 0 0 N N N N N N 69.995 140.679 88.077 6.155 -4.393 -3.202 H25A EMK 111
EMK H381 H381 H 0 0 N N N N N N 68.434 140.915 87.219 7.128 -5.742 -2.569 H381 EMK 112
EMK H28 H28 H 0 1 N N N N N N 72.944 131.377 93.303 6.757 5.015 0.534 H28 EMK 113
EMK H30 H30 H 0 1 N N N N N N 69.957 131.772 92.477 4.597 3.687 1.004 H30 EMK 114
EMK H32 H32 H 0 1 N N N N N N 70.694 131.354 90.107 6.648 3.362 2.247 H32 EMK 115
EMK H32A H32A H 0 0 N N N N N N 72.350 131.000 90.707 5.879 1.790 1.925 H32A EMK 116
EMK H32B H32B H 0 0 N N N N N N 70.980 129.936 91.172 7.302 2.294 0.982 H32B EMK 117
EMK H34 H34 H 0 1 N N N N N N 72.192 130.805 96.370 9.020 3.376 -1.793 H34 EMK 118
EMK H34A H34A H 0 0 N N N N N N 73.511 131.925 95.888 8.870 4.293 -0.275 H34A EMK 119
EMK H34B H34B H 0 0 N N N N N N 72.178 132.507 96.942 8.225 2.637 -0.383 H34B EMK 120
EMK H35 H35 H 0 1 N N N N N N 68.259 132.294 96.324 7.645 4.401 -3.975 H35 EMK 121
EMK H35A H35A H 0 0 N N N N N N 69.805 132.444 97.226 8.271 6.061 -3.822 H35A EMK 122
EMK H35B H35B H 0 0 N N N N N N 69.288 133.750 96.106 9.092 4.720 -2.988 H35B EMK 123
EMK H38 H38 H 0 1 N N N N N N 65.532 134.805 85.304 5.926 -4.524 4.146 H38 EMK 124
EMK H38A H38A H 0 0 N N N N N N 66.795 134.511 86.547 7.440 -5.340 3.688 H38A EMK 125
EMK H38B H38B H 0 0 N N N N N N 65.475 133.317 86.308 7.493 -3.781 4.546 H38B EMK 126
EMK H39 H39 H 0 1 N N N N N N 67.996 131.078 94.437 1.850 2.007 -0.189 H39 EMK 127
EMK H40 H40 H 0 1 N N N N N N 65.061 130.292 93.601 -0.793 0.819 0.776 H40 EMK 128
EMK H43 H43 H 0 1 N N N N N N 66.712 129.608 96.175 0.048 3.723 0.334 H43 EMK 129
EMK HO44 HO44 H 0 0 N N N N N N 64.529 131.617 95.443 -0.447 0.778 -1.589 HO44 EMK 130
EMK H45 H45 H 0 1 N N N N N N 66.709 127.183 95.161 -0.144 3.920 2.784 H45 EMK 131
EMK H45A H45A H 0 0 N N N N N N 65.784 127.783 93.743 -0.578 2.198 2.906 H45A EMK 132
EMK H47 H47 H 0 1 N N N N N N 68.650 128.644 94.564 2.055 3.322 1.844 H47 EMK 133
EMK H48 H48 H 0 1 N N N N N N 68.582 126.384 93.497 3.011 2.219 3.849 H48 EMK 134
EMK H48A H48A H 0 0 N N N N N N 67.726 127.080 92.079 1.812 3.451 4.308 H48A EMK 135
EMK H48B H48B H 0 0 N N N N N N 69.413 127.578 92.444 1.378 1.725 4.356 H48B EMK 136
EMK H50 H50 H 0 1 N N N N N N 63.057 129.592 97.489 -1.638 5.297 0.591 H50 EMK 137
EMK H50A H50A H 0 0 N N N N N N 64.664 130.327 97.811 -3.270 4.827 1.126 H50A EMK 138
EMK H50B H50B H 0 0 N N N N N N 63.701 130.860 96.391 -1.910 4.780 2.273 H50B EMK 139
EMK HO72 HO72 H 0 0 N N N N N N 67.762 133.084 88.544 2.298 -2.496 2.231 HO72 EMK 140
EMK HO73 HO73 H 0 0 N N N N N N 67.912 138.656 87.438 9.205 -5.574 1.189 HO73 EMK 141
EMK HO74 HO74 H 0 0 N N N N N N 65.108 140.455 89.398 7.032 -1.227 -0.409 HO74 EMK 142
EMK HO77 HO77 H 0 0 N N N N N N 71.636 129.252 93.231 4.527 5.694 0.026 HO77 EMK 143
EMK H81 H81 H 0 1 N N N N N N 66.249 127.760 96.970 -2.367 1.274 1.474 H81 EMK 144
EMK H81A H81A H 0 0 N N N N N N 64.912 128.151 98.146 -2.453 2.509 2.754 H81A EMK 145
EMK H82 H82 H 0 1 N N N N N N 63.580 126.317 97.377 -4.473 3.473 1.688 H82 EMK 146
EMK H82A H82A H 0 0 N N N N N N 64.541 126.110 95.895 -4.388 2.239 0.409 H82A EMK 147
EMK H83 H83 H 0 1 N N N N N N 64.270 119.874 98.024 -10.594 1.147 1.664 H83 EMK 148
EMK H84 H84 H 0 1 N N N N N N 61.840 121.434 98.936 -9.686 -0.786 2.924 H84 EMK 149
EMK H84A H84A H 0 0 N N N N N N 61.940 119.675 98.615 -8.923 -1.397 1.437 H84A EMK 150
EMK H85 H85 H 0 1 N N N N N N 63.829 119.383 100.329 -9.019 -0.046 -0.663 H85 EMK 151
EMK H87 H87 H 0 1 N N N N N N 65.869 122.423 101.507 -10.243 -2.092 -0.850 H87 EMK 152
EMK H88 H88 H 0 1 N N N N N N 68.332 122.312 102.108 -12.348 -3.209 -1.472 H88 EMK 153
EMK H90 H90 H 0 1 N N N N N N 68.569 118.268 100.401 -14.419 0.503 -1.133 H90 EMK 154
EMK H91 H91 H 0 1 N N N N N N 66.115 118.389 99.785 -12.317 1.619 -0.502 H91 EMK 155
EMK H92 H92 H 0 1 N N N N N N 71.837 120.262 103.822 -15.901 -1.894 0.430 H92 EMK 156
EMK H92A H92A H 0 0 N N N N N N 70.369 121.288 103.961 -16.674 -3.272 -0.389 H92A EMK 157
EMK H92B H92B H 0 0 N N N N N N 70.235 119.503 104.117 -15.037 -3.443 0.288 H92B EMK 158
EMK H93 H93 H 0 1 N N N N N N 63.504 123.638 99.151 -7.061 -0.389 1.583 H93 EMK 159
EMK H94 H94 H 0 1 N N N N N N 66.547 125.605 97.221 -4.640 0.455 2.112 H94 EMK 160
EMK H94A H94A H 0 0 N N N N N N 65.582 125.852 98.756 -4.725 1.689 3.392 H94A EMK 161
EMK HO96 HO96 H 0 0 N N N N N N 63.654 121.170 101.952 -10.573 2.400 -0.485 HO96 EMK 162
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EMK C1 C2 SING N N 1
EMK F1 C84 SING N N 2
EMK S1 C92 SING N N 3
EMK C2 C16 SING N N 4
EMK C3 C2 SING N N 5
EMK C3 C4 SING N N 6
EMK C3 O71 SING N N 7
EMK C4 C17 SING N N 8
EMK C5 C4 SING N N 9
EMK C5 O42 SING N N 10
EMK C6 C5 SING N N 11
EMK C6 C7 SING N N 12
EMK C8 C7 SING N N 13
EMK C8 C19 SING N N 14
EMK C9 C8 SING N N 15
EMK N9 C9 SING N N 16
EMK N9 C12 SING N N 17
EMK C10 O71 SING N N 18
EMK C10 C21 SING N N 19
EMK C12 C13 SING N N 20
EMK C13 C14 SING N N 21
EMK C14 C15 SING N N 22
EMK C14 C23 SING N N 23
EMK C15 O75 SING N N 24
EMK C18 C6 SING N N 25
EMK C20 C12 SING N N 26
EMK C21 C26 SING N N 27
EMK C24 C15 SING N N 28
EMK C25 C24 SING N N 29
EMK C26 O76 SING N N 30
EMK C26 C34 SING N N 31
EMK C28 C26 SING N N 32
EMK C28 O77 SING N N 33
EMK C30 C28 SING N N 34
EMK C32 C30 SING N N 35
EMK C38 N9 SING N N 36
EMK C39 C40 SING N N 37
EMK C40 O44 SING N N 38
EMK C40 C43 SING N N 39
EMK O41 C39 SING N N 40
EMK O41 C47 SING N N 41
EMK O42 C39 SING N N 42
EMK C43 N46 SING N N 43
EMK C45 C43 SING N N 44
EMK N46 C50 SING N N 45
EMK N46 C81 SING N N 46
EMK C47 C45 SING N N 47
EMK C48 C47 SING N N 48
EMK O70 C1 DOUB N N 49
EMK O72 C6 SING N N 50
EMK O73 C13 SING N N 51
EMK O74 C14 SING N N 52
EMK O75 C1 SING N N 53
EMK O76 C35 SING N N 54
EMK O78 C10 SING N N 55
EMK O78 C30 SING N N 56
EMK N81 C93 SING Y N 57
EMK N81 C83 SING N N 58
EMK C82 C81 SING N N 59
EMK C82 C94 SING N N 60
EMK N82 N81 SING Y N 61
EMK C83 C85 SING N N 62
EMK N83 N82 DOUB Y N 63
EMK N83 C95 SING Y N 64
EMK C84 C83 SING N N 65
EMK C85 C86 SING N N 66
EMK C85 O96 SING N N 67
EMK C86 C87 SING Y N 68
EMK C87 C88 DOUB Y N 69
EMK C89 S1 SING N N 70
EMK C89 C88 SING Y N 71
EMK C90 C89 DOUB Y N 72
EMK C91 C86 DOUB Y N 73
EMK C91 C90 SING Y N 74
EMK C94 C95 SING N N 75
EMK O94 S1 DOUB N N 76
EMK C95 C93 DOUB Y N 77
EMK O95 S1 DOUB N N 78
EMK C2 H2 SING N N 79
EMK C3 H3 SING N N 80
EMK C4 H4 SING N N 81
EMK C5 H5 SING N N 82
EMK C7 H7 SING N N 83
EMK C7 H7A SING N N 84
EMK C8 H8 SING N N 85
EMK C9 H9 SING N N 86
EMK C9 H9A SING N N 87
EMK C10 H10 SING N N 88
EMK C12 H12 SING N N 89
EMK C13 H13 SING N N 90
EMK C15 H15 SING N N 91
EMK C16 H16 SING N N 92
EMK C16 H16A SING N N 93
EMK C16 H16B SING N N 94
EMK C17 H17 SING N N 95
EMK C17 H17A SING N N 96
EMK C17 H17B SING N N 97
EMK C18 H18 SING N N 98
EMK C18 H18A SING N N 99
EMK C18 H18B SING N N 100
EMK C19 H19 SING N N 101
EMK C19 H19A SING N N 102
EMK C19 H19B SING N N 103
EMK C20 H20 SING N N 104
EMK C20 H20A SING N N 105
EMK C20 H20B SING N N 106
EMK C21 H21 SING N N 107
EMK C21 H21A SING N N 108
EMK C23 H23 SING N N 109
EMK C23 H23A SING N N 110
EMK C23 H23B SING N N 111
EMK C24 H24 SING N N 112
EMK C24 H351 SING N N 113
EMK C25 H25 SING N N 114
EMK C25 H25A SING N N 115
EMK C25 H381 SING N N 116
EMK C28 H28 SING N N 117
EMK C30 H30 SING N N 118
EMK C32 H32 SING N N 119
EMK C32 H32A SING N N 120
EMK C32 H32B SING N N 121
EMK C34 H34 SING N N 122
EMK C34 H34A SING N N 123
EMK C34 H34B SING N N 124
EMK C35 H35 SING N N 125
EMK C35 H35A SING N N 126
EMK C35 H35B SING N N 127
EMK C38 H38 SING N N 128
EMK C38 H38A SING N N 129
EMK C38 H38B SING N N 130
EMK C39 H39 SING N N 131
EMK C40 H40 SING N N 132
EMK C43 H43 SING N N 133
EMK O44 HO44 SING N N 134
EMK C45 H45 SING N N 135
EMK C45 H45A SING N N 136
EMK C47 H47 SING N N 137
EMK C48 H48 SING N N 138
EMK C48 H48A SING N N 139
EMK C48 H48B SING N N 140
EMK C50 H50 SING N N 141
EMK C50 H50A SING N N 142
EMK C50 H50B SING N N 143
EMK O72 HO72 SING N N 144
EMK O73 HO73 SING N N 145
EMK O74 HO74 SING N N 146
EMK O77 HO77 SING N N 147
EMK C81 H81 SING N N 148
EMK C81 H81A SING N N 149
EMK C82 H82 SING N N 150
EMK C82 H82A SING N N 151
EMK C83 H83 SING N N 152
EMK C84 H84 SING N N 153
EMK C84 H84A SING N N 154
EMK C85 H85 SING N N 155
EMK C87 H87 SING N N 156
EMK C88 H88 SING N N 157
EMK C90 H90 SING N N 158
EMK C91 H91 SING N N 159
EMK C92 H92 SING N N 160
EMK C92 H92A SING N N 161
EMK C92 H92B SING N N 162
EMK C93 H93 SING N N 163
EMK C94 H94 SING N N 164
EMK C94 H94A SING N N 165
EMK O96 HO96 SING N N 166
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EMK SMILES ACDLabs 12.01 O=S(=O)(c1ccc(cc1)C(O)C(n2nnc(c2)CCCN(C)C3C(O)C(OC(C)C3)OC5C(C(OC4OC(C(O)C(OC)(C4)C)C)C(C(=O)OC(CC)C(O)(C)C(O)C(N(C)CC(C)CC5(O)C)C)C)C)CF)C
EMK SMILES_CANONICAL CACTVS 3.370 CC[C@H]1OC(=O)[C@H](C)[C@@H](O[C@H]2C[C@@](C)(OC)[C@@H](O)[C@H](C)O2)[C@H](C)[C@@H](O[C@@H]3O[C@H](C)C[C@@H]([C@H]3O)N(C)CCCc4cn(nn4)[C@H](CF)[C@H](O)c5ccc(cc5)[S](C)(=O)=O)[C@](C)(O)C[C@@H](C)CN(C)[C@H](C)[C@@H](O)[C@]1(C)O
EMK SMILES CACTVS 3.370 CC[CH]1OC(=O)[CH](C)[CH](O[CH]2C[C](C)(OC)[CH](O)[CH](C)O2)[CH](C)[CH](O[CH]3O[CH](C)C[CH]([CH]3O)N(C)CCCc4cn(nn4)[CH](CF)[CH](O)c5ccc(cc5)[S](C)(=O)=O)[C](C)(O)C[CH](C)CN(C)[CH](C)[CH](O)[C]1(C)O
EMK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 CC[C@@H]1[C@@]([C@@H]([C@H]([N@](C[C@@H](C[C@@]([C@@H]([C@H]([C@@H]([C@H](C(=O)O1)C)O[C@H]2C[C@@]([C@H]([C@@H](O2)C)O)(C)OC)C)O[C@H]3[C@@H]([C@H](C[C@H](O3)C)[N@](C)CCCc4cn(nn4)[C@H](CF)[C@@H](c5ccc(cc5)S(=O)(=O)C)O)O)(C)O)C)C)C)O)(C)O
EMK SMILES "OpenEye OEToolkits" 1.7.0 CCC1C(C(C(N(CC(CC(C(C(C(C(C(=O)O1)C)OC2CC(C(C(O2)C)O)(C)OC)C)OC3C(C(CC(O3)C)N(C)CCCc4cn(nn4)C(CF)C(c5ccc(cc5)S(=O)(=O)C)O)O)(C)O)C)C)C)O)(C)O
EMK InChI InChI 1.03 InChI=1S/C52H88FN5O15S/c1-15-40-52(10,65)45(61)33(6)57(12)27-29(2)24-50(8,64)47(31(4)44(32(5)48(63)71-40)72-41-25-51(9,68-13)46(62)34(7)70-41)73-49-43(60)38(23-30(3)69-49)56(11)22-16-17-36-28-58(55-54-36)39(26-53)42(59)35-18-20-37(21-19-35)74(14,66)67/h18-21,28-34,38-47,49,59-62,64-65H,15-17,22-27H2,1-14H3/t29-,30-,31+,32-,33-,34+,38+,39-,40-,41+,42-,43-,44+,45-,46+,47-,49+,50-,51-,52-/m1/s1
EMK InChIKey InChI 1.03 YWHOXJJBJDOIMO-BOBSHVDTSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
EMK "SYSTEMATIC NAME" ACDLabs 12.01 "(2R,3S,4R,5R,8R,10R,11R,12S,13S,14R)-2-ethyl-3,4,10-trihydroxy-3,5,6,8,10,12,14-heptamethyl-15-oxo-11-[(3,4,6-trideoxy-3-{[3-(1-{(1R,2S)-3-fluoro-1-hydroxy-1-[4-(methylsulfonyl)phenyl]propan-2-yl}-1H-1,2,3-triazol-4-yl)propyl](methyl)amino}-beta-D-xylo-hexopyranosyl)oxy]-1-oxa-6-azacyclopentadecan-13-yl 2,6-dideoxy-3-C-methyl-3-O-methyl-alpha-L-ribo-hexopyranoside"
EMK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 (2R,3S,4S,5R,6R,8R,10S,11R,12R,13S,14R)-14-ethyl-5-[(2S,3R,4S,6R)-4-[3-[1-[(1R,2S)-3-fluoro-1-hydroxy-1-(4-methylsulfonylphenyl)propan-2-yl]-1,2,3-triazol-4-yl]propyl-methyl-amino]-3-hydroxy-6-methyl-oxan-2-yl]oxy-6,12,13-trihydroxy-3-[(2R,4R,5S,6S)-5-hydroxy-4-methoxy-4,6-dimethyl-oxan-2-yl]oxy-2,4,6,8,10,11,13-heptamethyl-15-oxa-10-azacyclopentadecan-1-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EMK 'Create component' 2010-09-20 RCSB
EMK 'Modify aromatic_flag' 2011-06-04 RCSB
EMK 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
EMK C1 C 11.201 11.467 1
EMK F1 F 10.104 -6.071 2
EMK S1 S 10.918 -13.822 3
EMK C2 C 10.591 10.097 4
EMK C3 C 10.591 8.597 5
EMK C4 C 11.201 7.226 6
EMK C5 C 12.316 6.223 7
EMK C6 C 13.743 5.759 8
EMK C7 C 15.235 5.916 9
EMK C8 C 16.534 6.666 10
EMK C9 C 17.415 7.880 11
EMK N9 N 17.727 9.347 12
EMK C10 C 7.800 8.989 13
EMK C12 C 17.415 10.814 14
EMK C13 C 16.534 12.027 15
EMK C14 C 15.235 12.777 16
EMK C15 C 13.743 12.934 17
EMK C16 C 9.319 10.892 18
EMK C17 C 9.988 6.345 19
EMK C18 C 13.205 4.359 20
EMK C19 C 17.537 5.551 21
EMK C20 C 18.786 11.424 22
EMK C21 C 6.528 8.194 23
EMK C23 C 15.313 14.275 24
EMK C24 C 13.586 14.426 25
EMK C25 C 12.216 15.036 26
EMK C26 C 5.203 8.898 27
EMK C28 C 5.151 10.397 28
EMK C30 C 6.423 11.192 29
EMK C32 C 6.371 12.691 30
EMK C34 C 4.499 7.574 31
EMK C35 C 3.000 7.522 32
EMK C38 C 19.227 9.347 33
EMK C39 C 10.267 4.174 34
EMK C40 C 10.267 2.674 35
EMK O41 O 8.968 4.924 36
EMK O42 O 11.566 4.924 37
EMK C43 C 8.968 1.924 38
EMK O44 O 11.566 1.924 39
EMK C45 C 7.669 2.674 40
EMK N46 N 8.968 0.424 41
EMK C47 C 7.669 4.174 42
EMK C48 C 6.370 4.924 43
EMK C50 C 10.267 -0.326 44
EMK O70 O 9.988 12.349 45
EMK O71 O 9.124 8.285 46
EMK O72 O 14.687 4.593 47
EMK O73 O 17.537 13.142 48
EMK O74 O 16.433 13.680 49
EMK O75 O 12.316 12.471 50
EMK O76 O 3.704 8.846 51
EMK O77 O 3.826 11.102 52
EMK O78 O 7.747 10.488 53
EMK C81 C 7.669 -0.326 54
EMK N81 N 7.120 -6.385 55
EMK C82 C 7.669 -1.826 56
EMK N82 N 5.620 -6.385 57
EMK C83 C 8.002 -7.598 58
EMK N83 N 5.157 -4.958 59
EMK C84 C 9.493 -7.441 60
EMK C85 C 7.392 -8.969 61
EMK C86 C 8.273 -10.182 62
EMK C87 C 7.663 -11.552 63
EMK C88 C 8.545 -12.766 64
EMK C89 C 10.037 -12.609 65
EMK C90 C 10.647 -11.239 66
EMK C91 C 9.765 -10.025 67
EMK C92 C 9.705 -14.704 68
EMK C93 C 7.583 -4.958 69
EMK C94 C 6.370 -2.576 70
EMK O94 O 12.132 -12.941 71
EMK C95 C 6.370 -4.076 72
EMK O95 O 11.800 -15.036 73
EMK O96 O 5.900 -9.125 74
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
EMK C1 C2 SINGLE NONE 1
EMK F1 C84 SINGLE NONE 2
EMK S1 C92 SINGLE NONE 3
EMK C2 C16 SINGLE BEGINWEDGE 4
EMK C3 C2 SINGLE NONE 5
EMK C3 C4 SINGLE NONE 6
EMK C3 O71 SINGLE BEGINDASH 7
EMK C4 C17 SINGLE BEGINWEDGE 8
EMK C5 C4 SINGLE NONE 9
EMK C5 O42 SINGLE BEGINDASH 10
EMK C6 C5 SINGLE NONE 11
EMK C6 C7 SINGLE NONE 12
EMK C8 C7 SINGLE NONE 13
EMK C8 C19 SINGLE BEGINDASH 14
EMK C9 C8 SINGLE NONE 15
EMK N9 C9 SINGLE NONE 16
EMK N9 C12 SINGLE NONE 17
EMK C10 O71 SINGLE BEGINWEDGE 18
EMK C10 C21 SINGLE NONE 19
EMK C12 C13 SINGLE NONE 20
EMK C13 C14 SINGLE NONE 21
EMK C14 C15 SINGLE NONE 22
EMK C14 C23 SINGLE BEGINDASH 23
EMK C15 O75 SINGLE NONE 24
EMK C6 C18 SINGLE BEGINDASH 25
EMK C12 C20 SINGLE BEGINWEDGE 26
EMK C21 C26 SINGLE NONE 27
EMK C15 C24 SINGLE BEGINDASH 28
EMK C25 C24 SINGLE NONE 29
EMK C26 O76 SINGLE NONE 30
EMK C26 C34 SINGLE BEGINDASH 31
EMK C28 C26 SINGLE NONE 32
EMK C28 O77 SINGLE BEGINWEDGE 33
EMK C30 C28 SINGLE NONE 34
EMK C30 C32 SINGLE BEGINDASH 35
EMK C38 N9 SINGLE NONE 36
EMK C39 C40 SINGLE NONE 37
EMK C40 O44 SINGLE BEGINDASH 38
EMK C40 C43 SINGLE NONE 39
EMK O41 C39 SINGLE NONE 40
EMK O41 C47 SINGLE NONE 41
EMK C39 O42 SINGLE BEGINWEDGE 42
EMK C43 N46 SINGLE BEGINWEDGE 43
EMK C45 C43 SINGLE NONE 44
EMK N46 C50 SINGLE NONE 45
EMK N46 C81 SINGLE NONE 46
EMK C47 C45 SINGLE NONE 47
EMK C47 C48 SINGLE BEGINWEDGE 48
EMK O70 C1 DOUBLE NONE 49
EMK O72 C6 SINGLE NONE 50
EMK C13 O73 SINGLE BEGINDASH 51
EMK O74 C14 SINGLE NONE 52
EMK O75 C1 SINGLE NONE 53
EMK O76 C35 SINGLE NONE 54
EMK O78 C10 SINGLE NONE 55
EMK O78 C30 SINGLE NONE 56
EMK N81 C93 SINGLE NONE 57
EMK N81 C83 SINGLE NONE 58
EMK C82 C81 SINGLE NONE 59
EMK C82 C94 SINGLE NONE 60
EMK N82 N81 SINGLE NONE 61
EMK C83 C85 SINGLE NONE 62
EMK N83 N82 DOUBLE NONE 63
EMK N83 C95 SINGLE NONE 64
EMK C83 C84 SINGLE BEGINDASH 65
EMK C85 C86 SINGLE NONE 66
EMK C85 O96 SINGLE BEGINWEDGE 67
EMK C86 C87 DOUBLE NONE 68
EMK C87 C88 SINGLE NONE 69
EMK C89 S1 SINGLE NONE 70
EMK C89 C88 DOUBLE NONE 71
EMK C90 C89 SINGLE NONE 72
EMK C91 C86 SINGLE NONE 73
EMK C91 C90 DOUBLE NONE 74
EMK C94 C95 SINGLE NONE 75
EMK O94 S1 DOUBLE NONE 76
EMK C95 C93 DOUBLE NONE 77
EMK O95 S1 DOUBLE NONE 78
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
EMK MurckoScaffold S1 scaffold 'O=C1C[C@@H](O[C@H]2CCCCO2)C[C@@H](O[C@H]2C[C@@H](NCCCc3cn(CCc4ccccc4)nn3)CCO2)CCCCNCCCCO1' InChI=1S/C36H57N5O6/c42-34-27-33(47-35-15-5-8-23-44-35)26-32(14-4-6-18-37-19-7-9-22-43-34)46-36-25-30(17-24-45-36)38-20-10-13-31-28-41(40-39-31)21-16-29-11-2-1-3-12-29/h1-3,11-12,28,30,32-33,35-38H,4-10,13-27H2/t30-,32-,33-,35-,36-/m0/s1 ANGQKVHDJPCOAJ-MBPZQIOHSA-N
EMK phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
EMK pyranose F2 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
EMK C1 S1 1
EMK C2 S1 1
EMK C3 S1 1
EMK C4 S1 1
EMK C5 S1 1
EMK C6 S1 1
EMK C7 S1 1
EMK C8 S1 1
EMK C9 S1 1
EMK N9 S1 1
EMK C10 S1 1
EMK C12 S1 1
EMK C13 S1 1
EMK C14 S1 1
EMK C15 S1 1
EMK C21 S1 1
EMK C26 S1 1
EMK C28 S1 1
EMK C30 S1 1
EMK C39 S1 1
EMK C40 S1 1
EMK O41 S1 1
EMK O42 S1 1
EMK C43 S1 1
EMK C45 S1 1
EMK N46 S1 1
EMK C47 S1 1
EMK O70 S1 1
EMK O71 S1 1
EMK O75 S1 1
EMK O78 S1 1
EMK C81 S1 1
EMK N81 S1 1
EMK C82 S1 1
EMK N82 S1 1
EMK C83 S1 1
EMK N83 S1 1
EMK C85 S1 1
EMK C86 S1 1
EMK C87 S1 1
EMK C88 S1 1
EMK C89 S1 1
EMK C90 S1 1
EMK C91 S1 1
EMK C93 S1 1
EMK C94 S1 1
EMK C95 S1 1
EMK C86 F1 1
EMK C87 F1 1
EMK C88 F1 1
EMK C89 F1 1
EMK C90 F1 1
EMK C91 F1 1
EMK C28 F2 1
EMK C30 F2 1
EMK O78 F2 1
EMK C10 F2 1
EMK C21 F2 1
EMK C26 F2 1
EMK O71 F2 1
EMK C45 F2 2
EMK C47 F2 2
EMK O41 F2 2
EMK C39 F2 2
EMK C40 F2 2
EMK C43 F2 2
EMK O42 F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id EMK
_pdbe_chem_comp_rdkit_properties.exactmw 1073.598
_pdbe_chem_comp_rdkit_properties.amw 1074.361
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 20
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 36
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 20
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 74
_pdbe_chem_comp_rdkit_properties.NumAtoms 162
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 22
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.827
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 3
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 20
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 561.400
_pdbe_chem_comp_rdkit_properties.tpsa 265.160
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.925
_pdbe_chem_comp_rdkit_properties.CrippenMR 271.027
_pdbe_chem_comp_rdkit_properties.chi0v 35.963
_pdbe_chem_comp_rdkit_properties.chi1v 19.455
_pdbe_chem_comp_rdkit_properties.chi2v 8.859
_pdbe_chem_comp_rdkit_properties.chi3v 8.859
_pdbe_chem_comp_rdkit_properties.chi4v 5.134
_pdbe_chem_comp_rdkit_properties.chi0n 123.146
_pdbe_chem_comp_rdkit_properties.chi1n 61.421
_pdbe_chem_comp_rdkit_properties.chi2n 8.117
_pdbe_chem_comp_rdkit_properties.chi3n 8.117
_pdbe_chem_comp_rdkit_properties.chi4n 4.763
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.810
_pdbe_chem_comp_rdkit_properties.kappa1 13.170
_pdbe_chem_comp_rdkit_properties.kappa2 25.324
_pdbe_chem_comp_rdkit_properties.kappa3 14.455
_pdbe_chem_comp_rdkit_properties.Phi 4.507
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
EMK UniChem PDBe EMK
EMK UniChem SureChEMBL SCHEMBL9969131
EMK UniChem PubChem 57336485
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
EMK C1 -3.944 1.405 0.505 ETKDGv3 1
EMK F1 8.540 -1.639 0.822 ETKDGv3 2
EMK S1 3.647 2.853 4.361 ETKDGv3 3
EMK C2 -3.409 0.999 -0.846 ETKDGv3 4
EMK C3 -1.917 0.548 -0.817 ETKDGv3 5
EMK C4 -1.639 -0.850 -0.108 ETKDGv3 6
EMK C5 -1.346 -1.992 -1.161 ETKDGv3 7
EMK C6 -1.090 -3.466 -0.627 ETKDGv3 8
EMK C7 -2.068 -3.921 0.503 ETKDGv3 9
EMK C8 -3.594 -3.894 0.207 ETKDGv3 10
EMK C9 -4.420 -4.283 1.463 ETKDGv3 11
EMK N9 -4.058 -3.446 2.639 ETKDGv3 12
EMK C10 -0.719 2.584 -1.126 ETKDGv3 13
EMK C12 -5.164 -2.623 3.212 ETKDGv3 14
EMK C13 -5.643 -1.542 2.183 ETKDGv3 15
EMK C14 -5.803 -0.066 2.722 ETKDGv3 16
EMK C15 -4.423 0.685 2.859 ETKDGv3 17
EMK C16 -4.341 -0.010 -1.521 ETKDGv3 18
EMK C17 -0.530 -0.726 0.959 ETKDGv3 19
EMK C18 0.362 -3.667 -0.094 ETKDGv3 20
EMK C19 -3.991 -4.816 -0.959 ETKDGv3 21
EMK C20 -6.319 -3.479 3.789 ETKDGv3 22
EMK C21 -1.077 3.972 -0.579 ETKDGv3 23
EMK C23 -6.608 -0.003 4.048 ETKDGv3 24
EMK C24 -3.482 0.189 3.978 ETKDGv3 25
EMK C25 -2.360 1.192 4.248 ETKDGv3 26
EMK C26 -0.435 4.230 0.811 ETKDGv3 27
EMK C28 0.940 3.470 0.905 ETKDGv3 28
EMK C30 1.546 3.086 -0.478 ETKDGv3 29
EMK C32 2.225 4.264 -1.186 ETKDGv3 30
EMK C34 -0.161 5.752 0.994 ETKDGv3 31
EMK C35 -2.387 4.518 2.186 ETKDGv3 32
EMK C38 -3.352 -4.227 3.674 ETKDGv3 33
EMK C39 -0.539 -1.436 -3.352 ETKDGv3 34
EMK C40 0.259 -0.202 -3.884 ETKDGv3 35
EMK O41 -0.196 -2.635 -4.026 ETKDGv3 36
EMK O42 -0.239 -1.592 -1.968 ETKDGv3 37
EMK C43 1.357 -0.561 -4.922 ETKDGv3 38
EMK O44 -0.649 0.706 -4.461 ETKDGv3 39
EMK C45 0.904 -1.645 -5.939 ETKDGv3 40
EMK N46 2.659 -0.840 -4.249 ETKDGv3 41
EMK C47 -0.292 -2.468 -5.424 ETKDGv3 42
EMK C48 -0.331 -3.846 -6.084 ETKDGv3 43
EMK C50 2.784 -2.169 -3.622 ETKDGv3 44
EMK O70 -4.650 2.446 0.603 ETKDGv3 45
EMK O71 -1.150 1.585 -0.212 ETKDGv3 46
EMK O72 -1.267 -4.358 -1.705 ETKDGv3 47
EMK O73 -6.843 -1.972 1.579 ETKDGv3 48
EMK O74 -6.525 0.672 1.755 ETKDGv3 49
EMK O75 -3.698 0.610 1.627 ETKDGv3 50
EMK O76 -1.285 3.700 1.837 ETKDGv3 51
EMK O77 0.810 2.286 1.655 ETKDGv3 52
EMK O78 0.668 2.423 -1.385 ETKDGv3 53
EMK C81 3.832 -0.532 -5.099 ETKDGv3 54
EMK N81 6.131 0.124 -1.324 ETKDGv3 55
EMK C82 4.135 0.981 -5.136 ETKDGv3 56
EMK N82 4.855 -0.082 -0.788 ETKDGv3 57
EMK C83 7.394 -0.084 -0.614 ETKDGv3 58
EMK N83 3.967 0.419 -1.548 ETKDGv3 59
EMK C84 7.316 -1.362 0.238 ETKDGv3 60
EMK C85 7.788 1.187 0.179 ETKDGv3 61
EMK C86 6.762 1.581 1.226 ETKDGv3 62
EMK C87 6.775 1.045 2.461 ETKDGv3 63
EMK C88 5.767 1.447 3.463 ETKDGv3 64
EMK C89 4.836 2.363 3.157 ETKDGv3 65
EMK C90 4.811 2.951 1.799 ETKDGv3 66
EMK C91 5.715 2.577 0.885 ETKDGv3 67
EMK C92 4.459 3.294 5.883 ETKDGv3 68
EMK C93 5.943 0.863 -2.519 ETKDGv3 69
EMK C94 3.938 1.706 -3.792 ETKDGv3 70
EMK O94 2.687 1.723 4.607 ETKDGv3 71
EMK C95 4.637 1.023 -2.656 ETKDGv3 72
EMK O95 2.883 4.052 3.872 ETKDGv3 73
EMK O96 9.057 1.017 0.759 ETKDGv3 74
EMK H2 -3.447 1.907 -1.488 ETKDGv3 75
EMK H3 -1.626 0.435 -1.877 ETKDGv3 76
EMK H4 -2.545 -1.146 0.447 ETKDGv3 77
EMK H5 -2.291 -2.079 -1.743 ETKDGv3 78
EMK H7 -1.801 -4.961 0.799 ETKDGv3 79
EMK H7A -1.876 -3.295 1.393 ETKDGv3 80
EMK H8 -3.886 -2.874 -0.082 ETKDGv3 81
EMK H9 -4.273 -5.367 1.674 ETKDGv3 82
EMK H9A -5.492 -4.170 1.204 ETKDGv3 83
EMK H10 -1.236 2.526 -2.112 ETKDGv3 84
EMK H12 -4.753 -2.096 4.089 ETKDGv3 85
EMK H13 -4.862 -1.490 1.397 ETKDGv3 86
EMK H15 -4.650 1.753 3.082 ETKDGv3 87
EMK H16 -4.493 -0.903 -0.891 ETKDGv3 88
EMK H16A -5.335 0.454 -1.696 ETKDGv3 89
EMK H16B -3.929 -0.321 -2.504 ETKDGv3 90
EMK H17 -0.544 -1.572 1.663 ETKDGv3 91
EMK H17A 0.470 -0.625 0.486 ETKDGv3 92
EMK H17B -0.713 0.146 1.616 ETKDGv3 93
EMK H18 0.579 -4.754 -0.014 ETKDGv3 94
EMK H18A 0.525 -3.252 0.915 ETKDGv3 95
EMK H18B 1.119 -3.237 -0.780 ETKDGv3 96
EMK H19 -5.095 -4.931 -1.009 ETKDGv3 97
EMK H19A -3.682 -4.376 -1.929 ETKDGv3 98
EMK H19B -3.537 -5.822 -0.839 ETKDGv3 99
EMK H20 -6.741 -4.180 3.041 ETKDGv3 100
EMK H20A -7.141 -2.825 4.145 ETKDGv3 101
EMK H20B -5.974 -4.065 4.665 ETKDGv3 102
EMK H21 -0.749 4.734 -1.318 ETKDGv3 103
EMK H21A -2.182 4.052 -0.537 ETKDGv3 104
EMK H23 -6.724 1.054 4.370 ETKDGv3 105
EMK H23A -6.138 -0.562 4.878 ETKDGv3 106
EMK H23B -7.624 -0.428 3.905 ETKDGv3 107
EMK H24 -3.010 -0.770 3.674 ETKDGv3 108
EMK H351 -4.023 0.043 4.933 ETKDGv3 109
EMK H25 -2.779 2.144 4.636 ETKDGv3 110
EMK H25A -1.786 1.400 3.322 ETKDGv3 111
EMK H381 -1.664 0.778 5.008 ETKDGv3 112
EMK H28 1.689 4.112 1.425 ETKDGv3 113
EMK H30 2.370 2.370 -0.261 ETKDGv3 114
EMK H32 2.927 4.784 -0.500 ETKDGv3 115
EMK H32A 1.485 4.993 -1.568 ETKDGv3 116
EMK H32B 2.809 3.890 -2.052 ETKDGv3 117
EMK H34 0.641 6.101 0.312 ETKDGv3 118
EMK H34A 0.162 5.961 2.036 ETKDGv3 119
EMK H34B -1.063 6.359 0.769 ETKDGv3 120
EMK H35 -3.137 3.890 2.707 ETKDGv3 121
EMK H35A -2.894 4.975 1.313 ETKDGv3 122
EMK H35B -2.067 5.307 2.899 ETKDGv3 123
EMK H38 -3.037 -3.571 4.513 ETKDGv3 124
EMK H38A -2.430 -4.679 3.253 ETKDGv3 125
EMK H38B -3.989 -5.048 4.065 ETKDGv3 126
EMK H39 -1.623 -1.233 -3.526 ETKDGv3 127
EMK H40 0.756 0.299 -3.019 ETKDGv3 128
EMK H43 1.494 0.366 -5.523 ETKDGv3 129
EMK HO44 -0.230 1.606 -4.420 ETKDGv3 130
EMK H45 0.589 -1.149 -6.884 ETKDGv3 131
EMK H45A 1.753 -2.301 -6.221 ETKDGv3 132
EMK H47 -1.243 -1.951 -5.701 ETKDGv3 133
EMK H48 0.579 -4.428 -5.822 ETKDGv3 134
EMK H48A -0.393 -3.741 -7.188 ETKDGv3 135
EMK H48B -1.223 -4.405 -5.730 ETKDGv3 136
EMK H50 2.773 -2.987 -4.371 ETKDGv3 137
EMK H50A 1.992 -2.326 -2.873 ETKDGv3 138
EMK H50B 3.737 -2.233 -3.054 ETKDGv3 139
EMK HO72 -0.474 -4.316 -2.298 ETKDGv3 140
EMK HO73 -6.800 -1.736 0.615 ETKDGv3 141
EMK HO74 -7.476 0.387 1.757 ETKDGv3 142
EMK HO77 0.833 2.539 2.615 ETKDGv3 143
EMK H81 4.746 -1.035 -4.709 ETKDGv3 144
EMK H81A 3.685 -0.907 -6.135 ETKDGv3 145
EMK H82 5.184 1.125 -5.475 ETKDGv3 146
EMK H82A 3.489 1.470 -5.896 ETKDGv3 147
EMK H83 8.186 -0.256 -1.377 ETKDGv3 148
EMK H84 6.542 -1.274 1.028 ETKDGv3 149
EMK H84A 7.041 -2.220 -0.412 ETKDGv3 150
EMK H85 7.862 2.016 -0.565 ETKDGv3 151
EMK H87 7.524 0.316 2.743 ETKDGv3 152
EMK H88 5.795 0.996 4.446 ETKDGv3 153
EMK H90 4.065 3.687 1.537 ETKDGv3 154
EMK H91 5.680 3.012 -0.106 ETKDGv3 155
EMK H92 3.712 3.694 6.599 ETKDGv3 156
EMK H92A 5.228 4.068 5.682 ETKDGv3 157
EMK H92B 4.943 2.399 6.324 ETKDGv3 158
EMK H93 6.722 1.217 -3.181 ETKDGv3 159
EMK H94 4.322 2.744 -3.880 ETKDGv3 160
EMK H94A 2.852 1.774 -3.563 ETKDGv3 161
EMK HO96 9.374 1.919 1.029 ETKDGv3 162
#