data_EOH
#
_chem_comp.id EOH
_chem_comp.name ETHANOL
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C2 H6 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces EOX
_chem_comp.formula_weight 46.068
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code EOH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EOH C1 C1 C 0 1 N N N N N N 15.212 49.198 7.491 0.007 -0.569 0.000 C1 EOH 1
EOH C2 C2 C 0 1 N N N N N N 16.069 50.386 7.104 -1.285 0.250 -0.000 C2 EOH 2
EOH O O O 0 1 N N N N N N 15.861 48.185 8.256 1.130 0.315 -0.000 O EOH 3
EOH H11 H11 H 0 1 N N N N N N 14.375 49.579 8.094 0.039 -1.197 0.890 H11 EOH 4
EOH H12 H12 H 0 1 N N N N N N 14.858 48.731 6.560 0.039 -1.197 -0.890 H12 EOH 5
EOH H21 H21 H 0 1 N N N N N N 15.467 51.098 6.520 -1.317 0.878 0.890 H21 EOH 6
EOH H22 H22 H 0 1 N N N N N N 16.442 50.880 8.013 -1.317 0.878 -0.890 H22 EOH 7
EOH H23 H23 H 0 1 N N N N N N 16.920 50.042 6.498 -2.142 -0.424 0.000 H23 EOH 8
EOH HO HO H 0 1 N N N N N N 15.244 47.488 8.447 1.986 -0.137 0.000 HO EOH 9
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EOH C1 C2 SING N N 1
EOH C1 O SING N N 2
EOH C1 H11 SING N N 3
EOH C1 H12 SING N N 4
EOH C2 H21 SING N N 5
EOH C2 H22 SING N N 6
EOH C2 H23 SING N N 7
EOH O HO SING N N 8
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EOH SMILES ACDLabs 11.02 OCC
EOH SMILES_CANONICAL CACTVS 3.352 CCO
EOH SMILES CACTVS 3.352 CCO
EOH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 CCO
EOH SMILES "OpenEye OEToolkits" 1.7.0 CCO
EOH InChI InChI 1.03 InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3
EOH InChIKey InChI 1.03 LFQSCWFLJHTTHZ-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
EOH "SYSTEMATIC NAME" ACDLabs 11.02 ethanol
EOH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 ethanol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EOH 'Create component' 1999-07-08 RCSB
EOH 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id EOH
_pdbe_chem_comp_drugbank_details.drugbank_id DB00898
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Ethanol
_pdbe_chem_comp_drugbank_details.description
'A clear, colorless liquid rapidly absorbed from the gastrointestinal tract and distributed throughout the body. It has bactericidal activity and is used often as a topical disinfectant. It is widely used as a solvent and preservative in pharmaceutical preparations as well as serving as the primary ingredient in alcoholic beverages.'
_pdbe_chem_comp_drugbank_details.cas_number 64-17-5
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Ethanol affects the brain’s neurons in several ways. It alters their membranes as well as their ion channels, enzymes, and receptors. Alcohol also binds directly to the receptors for acetylcholine, serotonin, GABA, and the NMDA receptors for glutamate.  The sedative effects of ethanol are mediated through binding to GABA receptors and glycine receptors (alpha 1 and alpha 2 subunits). It also inhibits NMDA receptor functioning. In its role as an anti-infective, ethanol acts as an osmolyte or dehydrating agent that disrupts the osmotic balance across cell membranes.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
EOH Alcohol ChEMBL 'United States Accepted Names'
EOH 'Alcohol, Diluted' ChEMBL 'United States Accepted Names'
EOH 'Alcohol, Rubbing' ChEMBL 'United States Accepted Names'
EOH 'Alcohol, Rubbing' ChEMBL 'United States Pharmacopeial Convention'
EOH Ethanol ChEMBL 'International Nonproprietary Name'
EOH Ethanol ChEMBL Tradename
EOH 'Ethyl Alcohol' ChEMBL Tradename
EOH 1-Hydroxyethane DrugBank ?
EOH Alcohol DrugBank ?
EOH 'Alcohol (ethyl)' DrugBank ?
EOH 'Alcohol anhydrous' DrugBank ?
EOH 'Alcohol denatured' DrugBank ?
EOH 'Alcohol, denatured' DrugBank ?
EOH 'Dehydrated alcohol' DrugBank ?
EOH 'Dehydrated ethanol' DrugBank ?
EOH 'Ethyl Alcohol' DrugBank ?
EOH 'Grain alcohol' DrugBank ?
EOH Hydroxyethane DrugBank ?
EOH Methylcarbinol DrugBank ?
EOH 'Spiritus vini' DrugBank ?
EOH 'Dehydrated ethanol' DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id EOH
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00898
_pdbe_chem_comp_drugbank_classification.parent 'Primary alcohols'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as primary alcohols. These are compounds comprising the primary alcohol functional group, with the general structure RCOH (R=alkyl, aryl).'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
EOH DB00898 'Gamma-aminobutyric acid receptor subunit alpha-1' Humans P14867 yes 1
EOH DB00898 'Glutamate receptor ionotropic, NMDA 3A' Humans Q8TCU5 yes 2
EOH DB00898 'Glycine receptor subunit alpha-1' Humans P23415 yes 3
EOH DB00898 'Glycine receptor subunit alpha-2' Humans P23416 yes 4
EOH DB00898 'Voltage-dependent L-type calcium channel subunit beta-1' Humans Q02641 unknown 5
EOH DB00898 '5-hydroxytryptamine receptor 3A' Humans P46098 unknown 6
EOH DB00898 'Gamma-aminobutyric acid receptor subunit alpha-2' Humans P47869 unknown 7
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-10' Humans Q9GZZ6 unknown 8
EOH DB00898 'Voltage-dependent L-type calcium channel subunit alpha-1C' Humans Q13936 unknown 9
EOH DB00898 'Gamma-aminobutyric acid receptor subunit alpha-5' Humans P31644 unknown 10
EOH DB00898 'Gamma-aminobutyric acid receptor subunit alpha-4' Humans P48169 unknown 11
EOH DB00898 'Gamma-aminobutyric acid receptor subunit alpha-3' Humans P34903 unknown 12
EOH DB00898 'Glutamate receptor 1' Humans P42261 unknown 13
EOH DB00898 'Voltage-dependent calcium channel gamma-1 subunit' Humans Q06432 unknown 14
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-2' Humans Q15822 unknown 15
EOH DB00898 'Gamma-aminobutyric acid receptor subunit alpha-6' Humans Q16445 unknown 16
EOH DB00898 'Glutamate receptor 2' Humans P42262 unknown 17
EOH DB00898 'Glutamate receptor 4' Humans P48058 unknown 18
EOH DB00898 'Glutamate receptor 3' Humans P42263 unknown 19
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-4' Humans P43681 unknown 20
EOH DB00898 'Neuronal acetylcholine receptor subunit beta-2' Humans P17787 unknown 21
EOH DB00898 'G protein-activated inward rectifier potassium channel 1' Humans P48549 unknown 22
EOH DB00898 'G protein-activated inward rectifier potassium channel 2' Humans P48051 unknown 23
EOH DB00898 'Vascular cell adhesion protein 1' Humans P19320 unknown 24
EOH DB00898 'Equilibrative nucleoside transporter 1' Humans Q99808 unknown 25
EOH DB00898 'G protein-activated inward rectifier potassium channel 4' Humans P48544 unknown 26
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-7' Humans P36544 unknown 27
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-9' Humans Q9UGM1 unknown 28
EOH DB00898 'Gamma-aminobutyric acid receptor subunit beta-1' Humans P18505 unknown 29
EOH DB00898 'Gamma-aminobutyric acid receptor subunit beta-3' Humans P28472 unknown 30
EOH DB00898 'Gamma-aminobutyric acid receptor subunit beta-2' Humans P47870 unknown 31
EOH DB00898 'Voltage-dependent L-type calcium channel subunit alpha-1S' Humans Q13698 unknown 32
EOH DB00898 'Voltage-dependent L-type calcium channel subunit alpha-1D' Humans Q01668 unknown 33
EOH DB00898 'Neuronal acetylcholine receptor subunit beta-4' Humans P30926 unknown 34
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-3' Humans P32297 unknown 35
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-5' Humans P30532 unknown 36
EOH DB00898 'Neuronal acetylcholine receptor subunit alpha-6' Humans Q15825 unknown 37
EOH DB00898 'Neuronal acetylcholine receptor subunit beta-3' Humans Q05901 unknown 38
EOH DB00898 'Gamma-aminobutyric acid receptor subunit gamma-1' Humans Q8N1C3 unknown 39
EOH DB00898 'Gamma-aminobutyric acid receptor subunit gamma-3' Humans Q99928 unknown 40
EOH DB00898 'Gamma-aminobutyric acid receptor subunit epsilon' Humans P78334 unknown 41
EOH DB00898 'Gamma-aminobutyric acid receptor subunit pi' Humans O00591 unknown 42
EOH DB00898 'Gamma-aminobutyric acid receptor subunit theta' Humans Q9UN88 unknown 43
EOH DB00898 'Gamma-aminobutyric acid receptor subunit delta' Humans O14764 unknown 44
EOH DB00898 'Equilibrative nucleoside transporter 2' Humans Q14542 unknown 45
EOH DB00898 '5-hydroxytryptamine receptor 3E' Humans A5X5Y0 unknown 46
EOH DB00898 '5-hydroxytryptamine receptor 3B' Humans O95264 unknown 47
EOH DB00898 '5-hydroxytryptamine receptor 3D' Humans Q70Z44 unknown 48
EOH DB00898 '5-hydroxytryptamine receptor 3C' Humans Q8WXA8 unknown 49
EOH DB00898 'Voltage-dependent calcium channel gamma-2 subunit' Humans Q9Y698 unknown 50
EOH DB00898 'G protein-activated inward rectifier potassium channel 3' Humans Q92806 unknown 51
EOH DB00898 'Neural cell adhesion molecule L1' Humans P32004 unknown 52
EOH DB00898 Acetylcholinesterase Humans P22303 unknown 53
EOH DB00898 'Alcohol dehydrogenase class 4 mu/sigma chain' Humans P40394 no 54
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
EOH C1 C 4.299 -0.375 1
EOH C2 C 5.598 0.375 2
EOH O O 3.000 0.375 3
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
EOH C1 C2 SINGLE NONE 1
EOH C1 O SINGLE NONE 2
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id EOH
_pdbe_chem_comp_rdkit_properties.exactmw 46.042
_pdbe_chem_comp_rdkit_properties.amw 46.069
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 1
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 3
_pdbe_chem_comp_rdkit_properties.NumAtoms 9
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 28.415
_pdbe_chem_comp_rdkit_properties.tpsa 20.230
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.001
_pdbe_chem_comp_rdkit_properties.CrippenMR 12.760
_pdbe_chem_comp_rdkit_properties.chi0v 1.408
_pdbe_chem_comp_rdkit_properties.chi1v 0.454
_pdbe_chem_comp_rdkit_properties.chi2v 0
_pdbe_chem_comp_rdkit_properties.chi3v 0
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 7.408
_pdbe_chem_comp_rdkit_properties.chi1n 3.362
_pdbe_chem_comp_rdkit_properties.chi2n 0
_pdbe_chem_comp_rdkit_properties.chi3n 0
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.040
_pdbe_chem_comp_rdkit_properties.kappa1 0.179
_pdbe_chem_comp_rdkit_properties.kappa2 1.960
_pdbe_chem_comp_rdkit_properties.kappa3 1.960
_pdbe_chem_comp_rdkit_properties.Phi 0.117
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
EOH UniChem ChEMBL CHEMBL545
EOH UniChem DrugBank DB00898
EOH UniChem PDBe EOH
EOH UniChem 'Guide to Pharmacology' 2299
EOH UniChem 'KEGG LIGAND' C00469
EOH UniChem ChEBI 16236
EOH UniChem eMolecules 475123
EOH UniChem atlas alcohol
EOH UniChem atlas ethanol
EOH UniChem fdasrs 3K9958V90M
EOH UniChem PharmGKB PA448073
EOH UniChem HMDB HMDB0000108
EOH UniChem NMRShiftDB 10009222
EOH UniChem ACTor 121182-78-3
EOH UniChem ACTor 64-17-5
EOH UniChem ACTor 68475-56-9
EOH UniChem Recon etoh
EOH UniChem Nikkaji J1.930E
EOH UniChem DrugCentral 1076
EOH UniChem MetaboLights MTBLC16236
EOH UniChem BRENDA 207851
EOH UniChem BRENDA 207852
EOH UniChem BRENDA 69
EOH UniChem BRENDA 93352
EOH UniChem Rhea 16236
EOH UniChem DailyMed ALCOHOL
EOH UniChem ClinicalTrials ALCOHOL
EOH UniChem ClinicalTrials 'ANHYDROUS ETHANOL'
EOH UniChem ClinicalTrials 'DEHYDRATED ALCOHOL'
EOH UniChem ClinicalTrials ETHANOL
EOH UniChem ClinicalTrials 'ETHYL ALCOHOL'
EOH UniChem rxnorm 'DEHYDRATED ALCOHOL'
EOH UniChem rxnorm ETHANOL
EOH UniChem 'Probes And Drugs' PD009657
EOH UniChem 'EPA CompTox Dashboard' DTXSID9020584
EOH UniChem SureChEMBL SCHEMBL463
EOH UniChem 'PubChem TPHARMA' 15170309
EOH UniChem PubChem 702
EOH UniChem Mcule MCULE-8818474596
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
EOH C1 0.489 -0.400 0.212 ETKDGv3 1
EOH C2 -0.920 0.119 -0.048 ETKDGv3 2
EOH O 1.401 0.663 0.249 ETKDGv3 3
EOH H11 0.509 -0.922 1.191 ETKDGv3 4
EOH H12 0.775 -1.133 -0.576 ETKDGv3 5
EOH H21 -1.212 0.840 0.746 ETKDGv3 6
EOH H22 -0.964 0.626 -1.035 ETKDGv3 7
EOH H23 -1.637 -0.728 -0.046 ETKDGv3 8
EOH HO 1.560 0.935 -0.692 ETKDGv3 9
#