data_ET9
#
_chem_comp.id ET9
_chem_comp.name
;[[(1R,3S,5S)-3-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-2-methylidene-5-oxidanyl-cyclopentyl]methoxy-oxidanyl-phosphory
l] phosphono hydrogen phosphate
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H18 N5 O12 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "Entecavir 5'-triphosphate"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-05-30
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 517.219
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ET9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5XN1
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ET9 "C1'" C1 C 0 1 N N S N N N 180.350 276.491 -124.153 3.522 -1.409 -1.272 "C1'" ET9 1
ET9 C2 C2 C 0 1 N N N N N N 181.476 272.313 -124.954 6.731 1.804 -1.322 C2 ET9 2
ET9 "C2'" C3 C 0 1 N N N N N N 180.587 276.327 -122.663 3.750 -2.902 -0.927 "C2'" ET9 3
ET9 "C3'" C4 C 0 1 N N S N N N 180.984 277.679 -122.121 2.606 -3.187 0.079 "C3'" ET9 4
ET9 C4 C5 C 0 1 Y N N N N N 181.721 274.617 -124.964 5.069 0.383 -0.407 C4 ET9 5
ET9 "C4'" C6 C 0 1 N N R N N N 180.339 278.706 -123.020 1.422 -2.363 -0.469 "C4'" ET9 6
ET9 C44 C7 C 0 1 N N N N N N 180.034 278.537 -125.446 1.344 -0.339 -1.971 C44 ET9 7
ET9 C5 C8 C 0 1 Y N N N N N 182.998 274.447 -125.610 5.295 0.951 0.841 C5 ET9 8
ET9 "C5'" C9 C 0 1 N N N N N N 181.158 279.958 -123.211 0.621 -1.764 0.689 "C5'" ET9 9
ET9 C6 C10 C 0 1 N N N N N N 183.424 273.069 -125.897 6.319 1.995 0.950 C6 ET9 10
ET9 "C6'" C11 C 0 1 N N N N N N 180.238 277.960 -124.298 2.012 -1.257 -1.318 "C6'" ET9 11
ET9 C8 C12 C 0 1 Y N N N N N 182.586 276.551 -125.290 3.746 -0.540 1.086 C8 ET9 12
ET9 N1 N1 N 0 1 N N N N N N 182.632 272.089 -125.543 6.979 2.365 -0.158 N1 ET9 13
ET9 N2 N2 N 0 1 N N N N N N 180.735 271.262 -124.626 7.440 2.219 -2.418 N2 ET9 14
ET9 N3 N3 N 0 1 N N N N N N 181.019 273.527 -124.662 5.801 0.826 -1.478 N3 ET9 15
ET9 N7 N4 N 0 1 Y N N N N N 183.470 275.676 -125.788 4.458 0.349 1.718 N7 ET9 16
ET9 N9 N5 N 0 1 Y N N N N N 181.534 275.909 -124.806 4.094 -0.550 -0.233 N9 ET9 17
ET9 O1A O1 O 0 1 N N N N N N 183.609 281.635 -122.792 -0.909 0.900 1.837 O1A ET9 18
ET9 O1B O2 O 0 1 N N N N N N 182.635 281.051 -120.478 -4.907 -0.141 1.637 O1B ET9 19
ET9 O1G O3 O 0 1 N N N N N N 186.864 281.282 -119.774 -7.114 0.815 -2.599 O1G ET9 20
ET9 O2A O4 O 0 1 N N N N N N 184.901 279.993 -123.972 -2.108 -1.300 2.141 O2A ET9 21
ET9 O2B O5 O 0 1 N N N N N N 182.706 278.687 -119.722 -4.265 2.220 1.020 O2B ET9 22
ET9 O2G O6 O 0 1 N N N N N N 185.304 281.869 -117.966 -7.507 -0.771 -0.539 O2G ET9 23
ET9 "O3'" O7 O 0 1 N N N N N N 180.551 277.793 -120.782 2.285 -4.579 0.094 "O3'" ET9 24
ET9 O3A O8 O 0 1 N N N N N N 183.966 279.330 -121.768 -2.843 0.160 0.217 O3A ET9 25
ET9 O3B O9 O 0 1 N N N N N N 184.741 280.046 -119.495 -5.249 0.558 -0.764 O3B ET9 26
ET9 O3G O10 O 0 1 N N N N N N 184.781 282.417 -120.278 -7.426 1.737 -0.271 O3G ET9 27
ET9 "O5'" O11 O 0 1 N N N N N N 182.420 279.619 -123.751 -0.537 -1.102 0.175 "O5'" ET9 28
ET9 O6 O12 O 0 1 N N N N N N 184.491 272.804 -126.439 6.556 2.527 2.024 O6 ET9 29
ET9 PA P1 P 0 1 N N N N N N 183.737 280.185 -123.082 -1.610 -0.356 1.115 PA ET9 30
ET9 PB P2 P 0 1 N N N N N N 183.437 279.795 -120.353 -4.329 0.681 0.551 PB ET9 31
ET9 PG P3 P 0 1 N N N N N N 185.453 281.461 -119.372 -6.837 0.610 -1.026 PG ET9 32
ET9 H1 H1 H 0 1 N N N N N N 179.425 275.983 -124.463 3.958 -1.173 -2.243 H1 ET9 33
ET9 H2 H2 H 0 1 N N N N N N 179.666 275.980 -122.171 3.649 -3.525 -1.815 H2 ET9 34
ET9 H3 H3 H 0 1 N N N N N N 181.393 275.599 -122.488 4.723 -3.047 -0.458 H3 ET9 35
ET9 H4 H4 H 0 1 N N N N N N 182.077 277.784 -122.182 2.881 -2.848 1.078 H4 ET9 36
ET9 H5 H5 H 0 1 N N N N N N 179.338 278.962 -122.644 0.778 -2.997 -1.078 H5 ET9 37
ET9 H6 H6 H 0 1 N N N N N N 179.929 279.611 -125.500 1.872 0.405 -2.549 H6 ET9 38
ET9 H7 H7 H 0 1 N N N N N N 179.969 277.942 -126.345 0.265 -0.327 -1.933 H7 ET9 39
ET9 H8 H8 H 0 1 N N N N N N 181.297 280.457 -122.240 0.313 -2.559 1.368 H8 ET9 40
ET9 H9 H9 H 0 1 N N N N N N 180.635 280.637 -123.901 1.241 -1.046 1.226 H9 ET9 41
ET9 H10 H10 H 0 1 N N N N N N 182.713 277.623 -125.284 2.996 -1.172 1.538 H10 ET9 42
ET9 H11 H11 H 0 1 N N N N N N 181.061 270.338 -124.828 7.274 1.816 -3.284 H11 ET9 43
ET9 H12 H12 H 0 1 N N N N N N 179.851 271.394 -124.177 8.108 2.916 -2.327 H12 ET9 44
ET9 H13 H13 H 0 1 N N N N N N 180.133 273.623 -124.208 5.653 0.438 -2.355 H13 ET9 45
ET9 H14 H14 H 0 1 N N N N N N 184.299 282.110 -123.240 -0.559 1.561 1.224 H14 ET9 46
ET9 H15 H15 H 0 1 N N N N N N 187.048 281.821 -120.535 -8.052 0.855 -2.831 H15 ET9 47
ET9 H16 H16 H 0 1 N N N N N N 181.828 278.973 -119.499 -3.895 2.818 0.356 H16 ET9 48
ET9 H17 H17 H 0 1 N N N N N N 184.801 282.673 -117.921 -7.168 -1.554 -0.993 H17 ET9 49
ET9 H18 H18 H 0 1 N N N N N N 180.980 277.131 -120.253 3.016 -5.148 0.369 H18 ET9 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ET9 O6 C6 DOUB N N 1
ET9 C6 C5 SING N N 2
ET9 C6 N1 SING N N 3
ET9 N7 C5 SING Y N 4
ET9 N7 C8 DOUB Y N 5
ET9 C5 C4 DOUB Y N 6
ET9 N1 C2 DOUB N N 7
ET9 C44 "C6'" DOUB N N 8
ET9 C8 N9 SING Y N 9
ET9 C4 N9 SING Y N 10
ET9 C4 N3 SING N N 11
ET9 C2 N3 SING N N 12
ET9 C2 N2 SING N N 13
ET9 N9 "C1'" SING N N 14
ET9 "C6'" "C1'" SING N N 15
ET9 "C6'" "C4'" SING N N 16
ET9 "C1'" "C2'" SING N N 17
ET9 O2A PA DOUB N N 18
ET9 "O5'" "C5'" SING N N 19
ET9 "O5'" PA SING N N 20
ET9 "C5'" "C4'" SING N N 21
ET9 PA O1A SING N N 22
ET9 PA O3A SING N N 23
ET9 "C4'" "C3'" SING N N 24
ET9 "C2'" "C3'" SING N N 25
ET9 "C3'" "O3'" SING N N 26
ET9 O3A PB SING N N 27
ET9 O1B PB DOUB N N 28
ET9 PB O2B SING N N 29
ET9 PB O3B SING N N 30
ET9 O3G PG DOUB N N 31
ET9 O1G PG SING N N 32
ET9 O3B PG SING N N 33
ET9 PG O2G SING N N 34
ET9 "C1'" H1 SING N N 35
ET9 "C2'" H2 SING N N 36
ET9 "C2'" H3 SING N N 37
ET9 "C3'" H4 SING N N 38
ET9 "C4'" H5 SING N N 39
ET9 C44 H6 SING N N 40
ET9 C44 H7 SING N N 41
ET9 "C5'" H8 SING N N 42
ET9 "C5'" H9 SING N N 43
ET9 C8 H10 SING N N 44
ET9 N2 H11 SING N N 45
ET9 N2 H12 SING N N 46
ET9 N3 H13 SING N N 47
ET9 O1A H14 SING N N 48
ET9 O1G H15 SING N N 49
ET9 O2B H16 SING N N 50
ET9 O2G H17 SING N N 51
ET9 "O3'" H18 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ET9 InChI InChI 1.03 InChI=1S/C12H18N5O12P3/c1-5-6(3-27-31(23,24)29-32(25,26)28-30(20,21)22)8(18)2-7(5)17-4-14-9-10(17)15-12(13)16-11(9)19/h4,6-8,18H,1-3H2,(H,23,24)(H,25,26)(H2,20,21,22)(H3,13,15,16,19)/t6-,7-,8-/m0/s1
ET9 InChIKey InChI 1.03 YMBBDUCQYPKKJK-FXQIFTODSA-N
ET9 SMILES_CANONICAL CACTVS 3.385 NC1=NC(=O)c2ncn([C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)C3=C)c2N1
ET9 SMILES CACTVS 3.385 NC1=NC(=O)c2ncn([CH]3C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)C3=C)c2N1
ET9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C=C1[C@H](C[C@@H]([C@H]1COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)n2cnc3c2NC(=NC3=O)N
ET9 SMILES "OpenEye OEToolkits" 2.0.6 C=C1C(CC(C1COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)n2cnc3c2NC(=NC3=O)N
#
_pdbx_chem_comp_identifier.comp_id ET9
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
"[[(1~{R},3~{S},5~{S})-3-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-2-methylidene-5-oxidanyl-cyclopentyl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ET9 'Create component' 2017-05-30 PDBJ
ET9 'Modify synonyms' 2017-06-19 PDBJ
ET9 'Initial release' 2018-02-07 RCSB
ET9 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id ET9
_pdbx_chem_comp_synonyms.name "Entecavir 5'-triphosphate"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id ET9
_pdbe_chem_comp_synonyms.name "Entecavir 5'-triphosphate"
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ET9 "C1'" C 9.588 -3.064 1
ET9 C2 C 5.104 -4.947 2
ET9 "C2'" C 8.708 -1.849 3
ET9 "C3'" C 9.592 -0.637 4
ET9 C4 C 7.702 -4.947 5
ET9 "C4'" C 11.018 -1.103 6
ET9 C44 C 12.227 -3.486 7
ET9 C5 C 7.702 -6.447 8
ET9 "C5'" C 12.233 -0.223 9
ET9 C6 C 6.404 -7.197 10
ET9 "C6'" C 11.015 -2.603 11
ET9 C8 C 9.997 -5.697 12
ET9 N1 N 5.104 -6.447 13
ET9 N2 N 3.805 -4.197 14
ET9 N3 N 6.404 -4.197 15
ET9 N7 N 9.122 -6.904 16
ET9 N9 N 9.122 -4.489 17
ET9 O1A O 14.173 0.934 18
ET9 O1B O 15.847 4.675 19
ET9 O1G O 14.536 8.107 20
ET9 O2A O 12.414 3.364 21
ET9 O2B O 12.863 4.366 22
ET9 O2G O 16.295 5.677 23
ET9 "O3'" O 9.131 0.791 24
ET9 O3A O 14.509 3.028 25
ET9 O3B O 14.200 6.012 26
ET9 O3G O 16.631 7.771 27
ET9 "O5'" O 12.079 1.269 28
ET9 O6 O 6.404 -8.697 29
ET9 PA P 13.294 2.149 30
ET9 PB P 14.354 4.520 31
ET9 PG P 15.415 6.892 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ET9 O6 C6 DOUBLE NONE 1
ET9 C6 C5 SINGLE NONE 2
ET9 C6 N1 SINGLE NONE 3
ET9 N7 C5 SINGLE NONE 4
ET9 N7 C8 DOUBLE NONE 5
ET9 C5 C4 DOUBLE NONE 6
ET9 N1 C2 DOUBLE NONE 7
ET9 C44 "C6'" DOUBLE NONE 8
ET9 C8 N9 SINGLE NONE 9
ET9 C4 N9 SINGLE NONE 10
ET9 C4 N3 SINGLE NONE 11
ET9 C2 N3 SINGLE NONE 12
ET9 C2 N2 SINGLE NONE 13
ET9 "C1'" N9 SINGLE BEGINWEDGE 14
ET9 "C6'" "C1'" SINGLE NONE 15
ET9 "C6'" "C4'" SINGLE NONE 16
ET9 "C1'" "C2'" SINGLE NONE 17
ET9 O2A PA DOUBLE NONE 18
ET9 "O5'" "C5'" SINGLE NONE 19
ET9 "O5'" PA SINGLE NONE 20
ET9 "C4'" "C5'" SINGLE BEGINWEDGE 21
ET9 PA O1A SINGLE BEGINWEDGE 22
ET9 PA O3A SINGLE NONE 23
ET9 "C4'" "C3'" SINGLE NONE 24
ET9 "C2'" "C3'" SINGLE NONE 25
ET9 "C3'" "O3'" SINGLE BEGINDASH 26
ET9 O3A PB SINGLE NONE 27
ET9 O1B PB DOUBLE NONE 28
ET9 PB O2B SINGLE BEGINDASH 29
ET9 PB O3B SINGLE NONE 30
ET9 O3G PG DOUBLE NONE 31
ET9 O1G PG SINGLE NONE 32
ET9 O3B PG SINGLE NONE 33
ET9 PG O2G SINGLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ET9 MurckoScaffold S1 scaffold 'C=C1CCC[C@@H]1n1cnc2c(=O)nc[nH]c21' InChI=1S/C11H12N4O/c1-7-3-2-4-8(7)15-6-14-9-10(15)12-5-13-11(9)16/h5-6,8H,1-4H2,(H,12,13,16)/t8-/m0/s1 FREMCWWAJZQSKJ-QMMMGPOBSA-N
ET9 cyclopentane F1 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
ET9 imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
ET9 phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
ET9 purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
ET9 pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ET9 "C1'" S1 1
ET9 C2 S1 1
ET9 "C2'" S1 1
ET9 "C3'" S1 1
ET9 C4 S1 1
ET9 "C4'" S1 1
ET9 C44 S1 1
ET9 C5 S1 1
ET9 C6 S1 1
ET9 "C6'" S1 1
ET9 C8 S1 1
ET9 N1 S1 1
ET9 N3 S1 1
ET9 N7 S1 1
ET9 N9 S1 1
ET9 O6 S1 1
ET9 "C1'" F1 1
ET9 "C6'" F1 1
ET9 "C4'" F1 1
ET9 "C3'" F1 1
ET9 "C2'" F1 1
ET9 C4 F2 1
ET9 C5 F2 1
ET9 N7 F2 1
ET9 C8 F2 1
ET9 N9 F2 1
ET9 O1A F3 1
ET9 PA F3 1
ET9 O2A F3 1
ET9 "O5'" F3 1
ET9 O3A F3 1
ET9 O1G F3 2
ET9 PG F3 2
ET9 O3G F3 2
ET9 O3B F3 2
ET9 O2G F3 2
ET9 O2B F3 3
ET9 PB F3 3
ET9 O1B F3 3
ET9 O3A F3 3
ET9 O3B F3 3
ET9 N7 F4 1
ET9 C8 F4 1
ET9 N9 F4 1
ET9 C4 F4 1
ET9 C5 F4 1
ET9 C6 F4 1
ET9 N1 F4 1
ET9 C2 F4 1
ET9 N3 F4 1
ET9 C5 F5 1
ET9 C6 F5 1
ET9 N1 F5 1
ET9 C2 F5 1
ET9 N3 F5 1
ET9 C4 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ET9
_pdbe_chem_comp_rdkit_properties.exactmw 517.016
_pdbe_chem_comp_rdkit_properties.amw 517.221
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 16
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 50
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 20
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.417
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 203.409
_pdbe_chem_comp_rdkit_properties.tpsa 269.640
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.386
_pdbe_chem_comp_rdkit_properties.CrippenMR 101.747
_pdbe_chem_comp_rdkit_properties.chi0v 17.160
_pdbe_chem_comp_rdkit_properties.chi1v 11.671
_pdbe_chem_comp_rdkit_properties.chi2v 6.639
_pdbe_chem_comp_rdkit_properties.chi3v 6.639
_pdbe_chem_comp_rdkit_properties.chi4v 4.760
_pdbe_chem_comp_rdkit_properties.chi0n 32.477
_pdbe_chem_comp_rdkit_properties.chi1n 15.672
_pdbe_chem_comp_rdkit_properties.chi2n 3.124
_pdbe_chem_comp_rdkit_properties.chi3n 3.124
_pdbe_chem_comp_rdkit_properties.chi4n 2.077
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.740
_pdbe_chem_comp_rdkit_properties.kappa1 10.256
_pdbe_chem_comp_rdkit_properties.kappa2 8.556
_pdbe_chem_comp_rdkit_properties.kappa3 5.596
_pdbe_chem_comp_rdkit_properties.Phi 2.742
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ET9 UniChem PDBe ET9
ET9 UniChem 'PubChem TPHARMA' 15011152
ET9 UniChem PubChem 135411098
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ET9 "C1'" -2.386 1.389 0.241 ETKDGv3 1
ET9 C2 -6.722 -0.050 -0.310 ETKDGv3 2
ET9 "C2'" -1.338 1.990 1.182 ETKDGv3 3
ET9 "C3'" -0.114 2.321 0.319 ETKDGv3 4
ET9 C4 -4.432 -0.140 0.609 ETKDGv3 5
ET9 "C4'" -0.167 1.361 -0.888 ETKDGv3 6
ET9 C44 -2.151 0.349 -2.018 ETKDGv3 7
ET9 C5 -4.585 -1.395 0.925 ETKDGv3 8
ET9 "C5'" 0.744 0.138 -0.693 ETKDGv3 9
ET9 C6 -5.844 -2.075 0.629 ETKDGv3 10
ET9 "C6'" -1.603 0.951 -0.954 ETKDGv3 11
ET9 C8 -2.520 -0.965 1.335 ETKDGv3 12
ET9 N1 -6.890 -1.310 0.004 ETKDGv3 13
ET9 N2 -7.785 0.670 -0.932 ETKDGv3 14
ET9 N3 -5.467 0.611 -0.035 ETKDGv3 15
ET9 N7 -3.363 -1.954 1.391 ETKDGv3 16
ET9 N9 -3.096 0.266 0.864 ETKDGv3 17
ET9 O1A 2.718 -2.034 -1.477 ETKDGv3 18
ET9 O1B 5.333 -2.556 0.732 ETKDGv3 19
ET9 O1G 9.121 0.151 1.200 ETKDGv3 20
ET9 O2A 2.823 -1.266 1.042 ETKDGv3 21
ET9 O2B 5.479 -2.593 -1.877 ETKDGv3 22
ET9 O2G 6.726 -0.625 2.306 ETKDGv3 23
ET9 "O3'" -0.208 3.651 -0.122 ETKDGv3 24
ET9 O3A 4.699 -0.302 -0.530 ETKDGv3 25
ET9 O3B 7.325 -1.242 -0.362 ETKDGv3 26
ET9 O3G 6.864 1.223 0.454 ETKDGv3 27
ET9 "O5'" 2.089 0.556 -0.700 ETKDGv3 28
ET9 O6 -6.011 -3.293 0.902 ETKDGv3 29
ET9 PA 3.077 -0.795 -0.375 ETKDGv3 30
ET9 PB 5.686 -1.691 -0.460 ETKDGv3 31
ET9 PG 7.477 -0.092 0.885 ETKDGv3 32
ET9 H1 -3.101 2.183 -0.062 ETKDGv3 33
ET9 H2 -1.036 1.261 1.964 ETKDGv3 34
ET9 H3 -1.735 2.895 1.694 ETKDGv3 35
ET9 H4 0.815 2.193 0.924 ETKDGv3 36
ET9 H5 0.121 1.890 -1.825 ETKDGv3 37
ET9 H6 -3.210 0.114 -2.038 ETKDGv3 38
ET9 H7 -1.544 0.091 -2.880 ETKDGv3 39
ET9 H8 0.480 -0.357 0.269 ETKDGv3 40
ET9 H9 0.564 -0.572 -1.532 ETKDGv3 41
ET9 H10 -1.477 -1.079 1.594 ETKDGv3 42
ET9 H11 -7.663 1.675 -1.190 ETKDGv3 43
ET9 H12 -8.695 0.201 -1.137 ETKDGv3 44
ET9 H13 -5.326 1.612 -0.296 ETKDGv3 45
ET9 H14 2.763 -2.873 -0.952 ETKDGv3 46
ET9 H15 9.515 0.388 0.323 ETKDGv3 47
ET9 H16 6.114 -3.348 -1.792 ETKDGv3 48
ET9 H17 7.249 -1.420 2.583 ETKDGv3 49
ET9 H18 0.689 3.898 -0.471 ETKDGv3 50
#