data_F58
#
_chem_comp.id F58
_chem_comp.name N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine
_chem_comp.type D-saccharide
_chem_comp.pdbx_type ATOMS
_chem_comp.formula "C14 H24 N2 O7"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
;N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucosylamine; N-[(cyclohexylcarbonyl)carbamoyl]-D-glucosylamine;
N-[(cyclohexylcarbonyl)carbamoyl]-glucosylamine
;
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-11-22
_chem_comp.pdbx_modified_date 2020-07-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 332.350
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code F58
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3ZCP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 F58 N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucosylamine PDB ?
2 F58 N-[(cyclohexylcarbonyl)carbamoyl]-D-glucosylamine PDB ?
3 F58 N-[(cyclohexylcarbonyl)carbamoyl]-glucosylamine PDB ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
F58 C1 C1 C 0 1 N N R N N N 33.449 22.889 27.938 1.767 0.308 -0.092 C1 F58 1
F58 N1 N1 N 0 1 N N N N N N 34.375 23.589 28.858 0.426 0.458 0.478 N1 F58 2
F58 C2 C2 C 0 1 N N R N N N 33.820 23.126 26.462 2.583 1.575 0.182 C2 F58 3
F58 N2 N2 N 0 1 N N N N N N 34.845 24.834 30.783 -1.871 0.055 0.374 N2 F58 4
F58 O2 O2 O 0 1 N N N N N N 33.965 24.537 26.193 1.966 2.689 -0.467 O2 F58 5
F58 C3 C3 C 0 1 N N S N N N 32.741 22.502 25.546 4.002 1.386 -0.363 C3 F58 6
F58 O3 O3 O 0 1 N N N N N N 33.163 22.554 24.167 4.791 2.535 -0.048 O3 F58 7
F58 C4 C4 C 0 1 N N S N N N 32.472 21.034 25.937 4.624 0.144 0.282 C4 F58 8
F58 O4 O4 O 0 1 N N N N N N 31.296 20.561 25.245 5.921 -0.083 -0.273 O4 F58 9
F58 C5 C5 C 0 1 N N R N N N 32.276 20.889 27.473 3.730 -1.067 0.004 C5 F58 10
F58 O5 O5 O 0 1 N N N N N N 33.398 21.467 28.182 2.417 -0.814 0.509 O5 F58 11
F58 C6 C6 C 0 1 N N N N N N 32.196 19.412 27.890 4.313 -2.301 0.696 C6 F58 12
F58 O6 O6 O 0 1 N N N N N N 33.274 18.677 27.298 3.545 -3.453 0.343 O6 F58 13
F58 C7 C7 C 0 1 N N N N N N 33.937 24.197 29.989 -0.637 -0.083 -0.150 C7 F58 14
F58 O7 O7 O 0 1 N N N N N N 32.744 24.163 30.283 -0.483 -0.696 -1.188 O7 F58 15
F58 C8 C8 C 0 1 N N N N N N 34.447 25.453 31.940 -2.934 -0.486 -0.254 C8 F58 16
F58 O8 O8 O 0 1 N N N N N N 33.282 25.518 32.353 -2.780 -1.098 -1.289 O8 F58 17
F58 C9 C9 C 0 1 N N N N N N 35.550 26.159 32.759 -4.314 -0.332 0.332 C9 F58 18
F58 C10 C10 C 0 1 N N N N N N 36.933 26.171 32.091 -5.332 -1.034 -0.569 C10 F58 19
F58 C11 C11 C 0 1 N N N N N N 37.891 27.059 32.918 -6.733 -0.877 0.026 C11 F58 20
F58 C12 C12 C 0 1 N N N N N N 37.964 26.555 34.377 -7.081 0.609 0.126 C12 F58 21
F58 C13 C13 C 0 1 N N N N N N 36.567 26.510 35.030 -6.063 1.312 1.027 C13 F58 22
F58 C14 C14 C 0 1 N N N N N N 35.622 25.625 34.201 -4.662 1.155 0.432 C14 F58 23
F58 H1 H1 H 0 1 N N N N N N 32.442 23.304 28.091 1.690 0.150 -1.167 H1 F58 24
F58 HN1 HN1 H 0 1 N N N N N N 35.350 23.614 28.639 0.302 0.948 1.306 HN1 F58 25
F58 H2 H2 H 0 1 N N N N N N 34.774 22.616 26.262 2.625 1.756 1.256 H2 F58 26
F58 HN2 HN2 H 0 1 N N N N N N 35.809 24.850 30.519 -1.995 0.544 1.202 HN2 F58 27
F58 HO2 HO2 H 0 1 N Y N N N N 34.193 24.664 25.280 1.061 2.864 -0.173 HO2 F58 28
F58 H3 H3 H 0 1 N N N N N N 31.808 23.072 25.671 3.963 1.257 -1.445 H3 F58 29
F58 HO3 HO3 H 0 1 N Y N N N N 32.493 22.168 23.615 4.451 3.360 -0.419 HO3 F58 30
F58 H4 H4 H 0 1 N N N N N N 33.343 20.431 25.642 4.709 0.296 1.357 H4 F58 31
F58 HO4 HO4 H 0 1 N Y N N N N 31.129 19.657 25.485 6.540 0.648 -0.139 HO4 F58 32
F58 H5 H5 H 0 1 N N N N N N 31.342 21.394 27.761 3.678 -1.243 -1.070 H5 F58 33
F58 H61 H6 H 0 1 N N N N N N 32.263 19.339 28.985 5.346 -2.442 0.378 H61 F58 34
F58 H62 H6A H 0 1 N N N N N N 31.238 18.989 27.552 4.281 -2.161 1.777 H62 F58 35
F58 HO6 HO6 H 0 1 N Y N N N N 33.218 17.766 27.560 3.858 -4.274 0.747 HO6 F58 36
F58 H9 H9 H 0 1 N N N N N N 35.241 27.212 32.839 -4.339 -0.779 1.326 H9 F58 37
F58 H10 H10 H 0 1 N N N N N N 37.329 25.146 32.046 -5.307 -0.587 -1.563 H10 F58 38
F58 H10A H10A H 0 0 N N N N N N 36.845 26.575 31.072 -5.084 -2.093 -0.640 H10A F58 39
F58 H11 H11 H 0 1 N N N N N N 38.895 27.023 32.471 -7.458 -1.378 -0.616 H11 F58 40
F58 H11A H11A H 0 0 N N N N N N 37.523 28.095 32.910 -6.758 -1.324 1.020 H11A F58 41
F58 H12 H12 H 0 1 N N N N N N 38.395 25.543 34.384 -7.056 1.056 -0.868 H12 F58 42
F58 H12A H12A H 0 0 N N N N N N 38.608 27.232 34.957 -8.079 0.721 0.549 H12A F58 43
F58 H13 H13 H 0 1 N N N N N N 36.654 26.097 36.046 -6.311 2.371 1.098 H13 F58 44
F58 H13A H13A H 0 0 N N N N N N 36.157 27.530 35.082 -6.088 0.865 2.021 H13A F58 45
F58 H14 H14 H 0 1 N N N N N N 34.617 25.642 34.649 -3.937 1.655 1.074 H14 F58 46
F58 H14A H14A H 0 0 N N N N N N 36.002 24.593 34.191 -4.637 1.602 -0.562 H14A F58 47
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
F58 C1 N1 SING N N 1
F58 C1 C2 SING N N 2
F58 C1 O5 SING N N 3
F58 N1 C7 SING N N 4
F58 C2 O2 SING N N 5
F58 C2 C3 SING N N 6
F58 N2 C7 SING N N 7
F58 N2 C8 SING N N 8
F58 C3 O3 SING N N 9
F58 C3 C4 SING N N 10
F58 C4 O4 SING N N 11
F58 C4 C5 SING N N 12
F58 C5 O5 SING N N 13
F58 C5 C6 SING N N 14
F58 C6 O6 SING N N 15
F58 C7 O7 DOUB N N 16
F58 C8 O8 DOUB N N 17
F58 C8 C9 SING N N 18
F58 C9 C10 SING N N 19
F58 C9 C14 SING N N 20
F58 C10 C11 SING N N 21
F58 C11 C12 SING N N 22
F58 C12 C13 SING N N 23
F58 C13 C14 SING N N 24
F58 C1 H1 SING N N 25
F58 N1 HN1 SING N N 26
F58 C2 H2 SING N N 27
F58 N2 HN2 SING N N 28
F58 O2 HO2 SING N N 29
F58 C3 H3 SING N N 30
F58 O3 HO3 SING N N 31
F58 C4 H4 SING N N 32
F58 O4 HO4 SING N N 33
F58 C5 H5 SING N N 34
F58 C6 H61 SING N N 35
F58 C6 H62 SING N N 36
F58 O6 HO6 SING N N 37
F58 C9 H9 SING N N 38
F58 C10 H10 SING N N 39
F58 C10 H10A SING N N 40
F58 C11 H11 SING N N 41
F58 C11 H11A SING N N 42
F58 C12 H12 SING N N 43
F58 C12 H12A SING N N 44
F58 C13 H13 SING N N 45
F58 C13 H13A SING N N 46
F58 C14 H14 SING N N 47
F58 C14 H14A SING N N 48
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
F58 SMILES ACDLabs 12.01 O=C(NC1OC(C(O)C(O)C1O)CO)NC(=O)C2CCCCC2
F58 InChI InChI 1.03 InChI=1S/C14H24N2O7/c17-6-8-9(18)10(19)11(20)13(23-8)16-14(22)15-12(21)7-4-2-1-3-5-7/h7-11,13,17-20H,1-6H2,(H2,15,16,21,22)/t8-,9-,10+,11-,13-/m1/s1
F58 InChIKey InChI 1.03 CKZJXIPUYBZFJC-BZNQNGANSA-N
F58 SMILES_CANONICAL CACTVS 3.370 OC[C@H]1O[C@@H](NC(=O)NC(=O)C2CCCCC2)[C@H](O)[C@@H](O)[C@@H]1O
F58 SMILES CACTVS 3.370 OC[CH]1O[CH](NC(=O)NC(=O)C2CCCCC2)[CH](O)[CH](O)[CH]1O
F58 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 C1CCC(CC1)C(=O)NC(=O)N[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O
F58 SMILES "OpenEye OEToolkits" 1.7.6 C1CCC(CC1)C(=O)NC(=O)NC2C(C(C(C(O2)CO)O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
F58 "SYSTEMATIC NAME" ACDLabs 12.01 N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine
F58 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 N-[[(2R,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]carbamoyl]cyclohexanecarboxamide
#
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
F58 "CARBOHYDRATE ISOMER" D PDB ?
F58 "CARBOHYDRATE RING" pyranose PDB ?
F58 "CARBOHYDRATE ANOMER" beta PDB ?
F58 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
F58 'Create component' 2012-11-22 EBI
F58 'Initial release' 2013-12-11 RCSB
F58 'Other modification' 2020-07-03 RCSB
F58 'Modify synonyms' 2020-07-17 RCSB
F58 'Modify internal type' 2020-07-17 RCSB
F58 'Modify linking type' 2020-07-17 RCSB
F58 'Modify atom id' 2020-07-17 RCSB
F58 'Modify component atom id' 2020-07-17 RCSB
F58 'Modify leaving atom flag' 2020-07-17 RCSB
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
F58 'N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucosylamine' wwPDB ?
F58 'N-[(cyclohexylcarbonyl)carbamoyl]-D-glucosylamine' wwPDB ?
F58 'N-[(cyclohexylcarbonyl)carbamoyl]-glucosylamine' wwPDB ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
F58 C1 C 7.702 -1.643 1
F58 N1 N 9.002 -0.892 2
F58 C2 C 7.702 -3.143 3
F58 N2 N 10.301 1.357 4
F58 O2 O 9.002 -3.893 5
F58 C3 C 6.404 -3.893 6
F58 O3 O 6.404 -5.393 7
F58 C4 C 5.104 -3.143 8
F58 O4 O 3.805 -3.893 9
F58 C5 C 5.104 -1.643 10
F58 O5 O 6.404 -0.892 11
F58 C6 C 3.805 -0.892 12
F58 O6 O 3.805 0.608 13
F58 C7 C 9.002 0.608 14
F58 O7 O 7.702 1.357 15
F58 C8 C 10.301 2.857 16
F58 O8 O 9.002 3.607 17
F58 C9 C 11.600 3.607 18
F58 C10 C 12.899 2.857 19
F58 C11 C 14.198 3.607 20
F58 C12 C 14.198 5.107 21
F58 C13 C 12.899 5.857 22
F58 C14 C 11.600 5.107 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
F58 C1 N1 SINGLE BEGINWEDGE 1
F58 C1 C2 SINGLE NONE 2
F58 C1 O5 SINGLE NONE 3
F58 N1 C7 SINGLE NONE 4
F58 C2 O2 SINGLE BEGINDASH 5
F58 C2 C3 SINGLE NONE 6
F58 N2 C7 SINGLE NONE 7
F58 N2 C8 SINGLE NONE 8
F58 C3 O3 SINGLE BEGINWEDGE 9
F58 C3 C4 SINGLE NONE 10
F58 C4 O4 SINGLE BEGINDASH 11
F58 C4 C5 SINGLE NONE 12
F58 C5 O5 SINGLE NONE 13
F58 C5 C6 SINGLE BEGINWEDGE 14
F58 C6 O6 SINGLE NONE 15
F58 C7 O7 DOUBLE NONE 16
F58 C8 O8 DOUBLE NONE 17
F58 C8 C9 SINGLE NONE 18
F58 C9 C10 SINGLE NONE 19
F58 C9 C14 SINGLE NONE 20
F58 C10 C11 SINGLE NONE 21
F58 C11 C12 SINGLE NONE 22
F58 C12 C13 SINGLE NONE 23
F58 C13 C14 SINGLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
F58 MurckoScaffold S1 scaffold 'O=C(NC(=O)C1CCCCC1)N[C@H]1CCCCO1' InChI=1S/C13H22N2O3/c16-12(10-6-2-1-3-7-10)15-13(17)14-11-8-4-5-9-18-11/h10-11H,1-9H2,(H2,14,15,16,17)/t11-/m1/s1 HZFLXKPCENBBTK-LLVKDONJSA-N
F58 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
F58 cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
F58 C1 S1 1
F58 N1 S1 1
F58 C2 S1 1
F58 N2 S1 1
F58 C3 S1 1
F58 C4 S1 1
F58 C5 S1 1
F58 O5 S1 1
F58 C7 S1 1
F58 O7 S1 1
F58 C8 S1 1
F58 O8 S1 1
F58 C9 S1 1
F58 C10 S1 1
F58 C11 S1 1
F58 C12 S1 1
F58 C13 S1 1
F58 C14 S1 1
F58 N2 F1 1
F58 C8 F1 1
F58 O8 F1 1
F58 C9 F1 1
F58 C9 F2 1
F58 C10 F2 1
F58 C11 F2 1
F58 C12 F2 1
F58 C13 F2 1
F58 C14 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id F58
_pdbe_chem_comp_rdkit_properties.exactmw 332.158
_pdbe_chem_comp_rdkit_properties.amw 332.353
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 47
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.857
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 167.367
_pdbe_chem_comp_rdkit_properties.tpsa 148.350
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.808
_pdbe_chem_comp_rdkit_properties.CrippenMR 77.017
_pdbe_chem_comp_rdkit_properties.chi0v 10.752
_pdbe_chem_comp_rdkit_properties.chi1v 5.527
_pdbe_chem_comp_rdkit_properties.chi2v 2.213
_pdbe_chem_comp_rdkit_properties.chi3v 2.213
_pdbe_chem_comp_rdkit_properties.chi4v 1.245
_pdbe_chem_comp_rdkit_properties.chi0n 34.752
_pdbe_chem_comp_rdkit_properties.chi1n 17.055
_pdbe_chem_comp_rdkit_properties.chi2n 2.213
_pdbe_chem_comp_rdkit_properties.chi3n 2.213
_pdbe_chem_comp_rdkit_properties.chi4n 1.245
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.260
_pdbe_chem_comp_rdkit_properties.kappa1 4.281
_pdbe_chem_comp_rdkit_properties.kappa2 8.022
_pdbe_chem_comp_rdkit_properties.kappa3 4.388
_pdbe_chem_comp_rdkit_properties.Phi 1.493
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
F58 UniChem PDBe F58
F58 UniChem ZINC ZINC000095920835
F58 UniChem PubChem 72193891
F58 UniChem Nikkaji J3.437.716B
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
F58 C1 -2.471 -0.203 0.004 ETKDGv3 1
F58 N1 -1.114 -0.273 -0.541 ETKDGv3 2
F58 C2 -3.089 1.172 -0.334 ETKDGv3 3
F58 N2 1.344 0.035 -0.411 ETKDGv3 4
F58 O2 -2.327 2.219 0.216 ETKDGv3 5
F58 C3 -4.546 1.235 0.165 ETKDGv3 6
F58 O3 -5.171 2.398 -0.314 ETKDGv3 7
F58 C4 -5.323 0.001 -0.329 ETKDGv3 8
F58 O4 -6.613 -0.019 0.230 ETKDGv3 9
F58 C5 -4.536 -1.296 0.000 ETKDGv3 10
F58 O5 -3.242 -1.240 -0.579 ETKDGv3 11
F58 C6 -5.247 -2.541 -0.557 ETKDGv3 12
F58 O6 -6.461 -2.774 0.104 ETKDGv3 13
F58 C7 0.057 0.039 0.227 ETKDGv3 14
F58 O7 -0.047 0.317 1.453 ETKDGv3 15
F58 C8 2.580 0.318 0.267 ETKDGv3 16
F58 O8 2.595 0.524 1.511 ETKDGv3 17
F58 C9 3.880 0.315 -0.501 ETKDGv3 18
F58 C10 4.623 -1.023 -0.270 ETKDGv3 19
F58 C11 6.121 -0.883 -0.561 ETKDGv3 20
F58 C12 6.790 0.141 0.380 ETKDGv3 21
F58 C13 5.830 1.241 0.876 ETKDGv3 22
F58 C14 4.747 1.558 -0.162 ETKDGv3 23
F58 H1 -2.428 -0.341 1.110 ETKDGv3 24
F58 HN1 -1.005 -0.445 -1.566 ETKDGv3 25
F58 H2 -3.090 1.293 -1.440 ETKDGv3 26
F58 HN2 1.379 -0.190 -1.431 ETKDGv3 27
F58 HO2 -2.323 2.103 1.202 ETKDGv3 28
F58 H3 -4.553 1.233 1.282 ETKDGv3 29
F58 HO3 -4.862 3.147 0.259 ETKDGv3 30
F58 H4 -5.430 0.076 -1.434 ETKDGv3 31
F58 HO4 -6.514 -0.120 1.213 ETKDGv3 32
F58 H5 -4.456 -1.423 1.106 ETKDGv3 33
F58 H61 -4.584 -3.430 -0.450 ETKDGv3 34
F58 H62 -5.447 -2.408 -1.642 ETKDGv3 35
F58 HO6 -6.233 -3.144 0.997 ETKDGv3 36
F58 H9 3.640 0.382 -1.586 ETKDGv3 37
F58 H10 4.190 -1.806 -0.930 ETKDGv3 38
F58 H10A 4.501 -1.366 0.782 ETKDGv3 39
F58 H11 6.616 -1.871 -0.447 ETKDGv3 40
F58 H11A 6.254 -0.560 -1.617 ETKDGv3 41
F58 H12 7.208 -0.389 1.264 ETKDGv3 42
F58 H12A 7.643 0.610 -0.156 ETKDGv3 43
F58 H13 6.409 2.162 1.103 ETKDGv3 44
F58 H13A 5.343 0.911 1.819 ETKDGv3 45
F58 H14 5.249 1.917 -1.089 ETKDGv3 46
F58 H14A 4.116 2.399 0.202 ETKDGv3 47
#