data_FJL
#
_chem_comp.id FJL
_chem_comp.name
"(2~{S},3~{S},4~{S},5~{R},6~{R})-6-[[(3~{S},4~{a}~{R},6~{a}~{R},6~{b}~{S},8~{a}~{S},11~{S},12~{a}~{R},14~{a}~{R},14~{b}~{S})-11-carboxy-4,4,6~{a},6~{b},8~{a},11,14~{b}-heptamethyl-14-oxidanylidene-2,3,4~{a},5,6,7,8,9,10,12,12~{a},14~{a}-dodecahydro-1~{H}-picen-3-yl]oxy]-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C36 H54 O10"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-05-22
_chem_comp.pdbx_modified_date 2021-05-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 646.808
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code FJL
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7C2X
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FJL C11 C1 C 0 1 N N R N N N 27.579 -2.119 19.315 2.036 -1.573 0.144 C11 FJL 1
FJL C12 C2 C 0 1 N N S N N N 25.419 -0.878 18.232 -0.344 -0.780 0.708 C12 FJL 2
FJL C13 C3 C 0 1 N N R N N N 26.612 -0.880 19.283 1.083 -0.401 0.311 C13 FJL 3
FJL C14 C4 C 0 1 N N S N N N 28.891 -1.644 20.143 3.372 -1.088 -0.435 C14 FJL 4
FJL C15 C5 C 0 1 N N R N N N 26.051 -1.226 16.841 -0.841 -1.833 -0.280 C15 FJL 5
FJL C16 C6 C 0 1 N N N N N N 27.934 -2.580 17.872 1.444 -2.680 -0.717 C16 FJL 6
FJL C17 C7 C 0 1 N N N N N N 25.132 -0.953 15.543 -2.316 -2.161 -0.203 C17 FJL 7
FJL C18 C8 C 0 1 N N N N N N 26.684 -2.638 16.947 0.049 -3.072 -0.204 C18 FJL 8
FJL C19 C9 C 0 1 N N N N N N 28.534 -1.227 21.581 3.911 0.070 0.348 C19 FJL 9
FJL C20 C10 C 0 1 N N R N N N 29.637 -1.047 22.672 5.377 0.456 0.265 C20 FJL 10
FJL C21 C11 C 0 1 N N S N N N 30.554 -2.316 22.683 6.229 -0.809 0.334 C21 FJL 11
FJL C22 C12 C 0 1 N N N N N N 29.882 -2.843 20.285 4.359 -2.245 -0.525 C22 FJL 12
FJL C23 C13 C 0 1 N N N N N N 24.729 0.521 18.154 -1.223 0.475 0.549 C23 FJL 13
FJL C24 C14 C 0 1 N N N N N N 31.051 -2.504 21.226 5.790 -1.764 -0.772 C24 FJL 14
FJL C25 C15 C 0 1 N N S N N N 24.525 0.522 15.652 -3.179 -0.898 -0.189 C25 FJL 15
FJL C26 C16 C 0 1 N N N N N N 26.321 -0.512 20.724 1.701 0.590 1.269 C26 FJL 16
FJL C27 C17 C 0 1 N N N N N N 26.955 -3.335 20.017 2.369 -2.165 1.524 C27 FJL 17
FJL C28 C18 C 0 1 N N N N N N 23.743 0.639 16.977 -2.681 0.119 0.829 C28 FJL 18
FJL C29 C19 C 0 1 N N N N N N 24.324 -1.860 18.677 -0.434 -1.239 2.157 C29 FJL 19
FJL C30 C20 C 0 1 N N N N N N 29.606 -0.543 19.329 3.102 -0.600 -1.865 C30 FJL 20
FJL C31 C21 C 0 1 N N N N N N 27.355 -0.597 21.768 3.145 0.827 1.141 C31 FJL 21
FJL C32 C22 C 0 1 N N N N N N 30.482 0.258 22.574 5.644 1.224 -1.023 C32 FJL 22
FJL C33 C23 C 0 1 N N N N N N 31.739 -2.164 23.688 7.709 -0.462 0.188 C33 FJL 23
FJL C34 C24 C 0 1 N N S N N N 31.501 0.420 23.736 7.124 1.579 -1.161 C34 FJL 24
FJL C35 C25 C 0 1 N N N N N N 24.028 -1.996 15.363 -2.674 -3.058 0.979 C35 FJL 25
FJL C36 C26 C 0 1 N N N N N N 26.039 -1.002 14.301 -2.703 -2.932 -1.491 C36 FJL 26
FJL C37 C27 C 0 1 N N N N N N 32.449 -0.797 23.668 7.972 0.311 -1.097 C37 FJL 27
FJL C38 C28 C 0 1 N N N N N N 29.733 -3.566 23.096 6.034 -1.471 1.704 C38 FJL 28
FJL C39 C29 C 0 1 N N N N N N 32.311 1.733 23.575 7.341 2.249 -2.527 C39 FJL 29
FJL C40 C30 C 0 1 N N N N N N 30.746 0.514 25.138 7.536 2.544 -0.081 C40 FJL 30
FJL C41 C31 C 0 1 N N R N N N 24.131 2.136 13.937 -5.511 -0.400 -0.460 C41 FJL 31
FJL C42 C32 C 0 1 N N R N N N 23.271 2.499 12.644 -6.909 -0.948 -0.165 C42 FJL 32
FJL C43 C33 C 0 1 N N S N N N 23.792 3.906 12.136 -7.957 0.009 -0.741 C43 FJL 33
FJL C44 C34 C 0 1 N N S N N N 24.314 4.424 14.599 -6.310 1.861 -0.440 C44 FJL 34
FJL C45 C35 C 0 1 N N S N N N 23.621 4.958 13.297 -7.741 1.403 -0.144 C45 FJL 35
FJL C46 C36 C 0 1 N N N N N N 24.000 5.401 15.864 -6.071 3.207 0.195 C46 FJL 36
FJL O01 O1 O 0 1 N N N N N N 23.721 0.894 14.515 -4.529 -1.260 0.123 O01 FJL 37
FJL O02 O2 O 0 1 N N N N N N 25.169 -0.106 21.063 1.061 1.196 2.105 O02 FJL 38
FJL O03 O3 O 0 1 N N N N N N 30.973 -0.345 26.015 8.802 2.985 -0.022 O03 FJL 39
FJL O04 O4 O 0 1 N N N N N N 23.815 3.126 14.900 -5.387 0.910 0.096 O04 FJL 40
FJL O05 O5 O 0 1 N N N N N N 29.958 1.479 25.287 6.726 2.921 0.732 O05 FJL 41
FJL O06 O6 O 0 1 N N N N N N 23.584 1.510 11.702 -7.055 -2.236 -0.768 O06 FJL 42
FJL O07 O7 O 0 1 N N N N N N 22.979 4.271 11.040 -9.266 -0.456 -0.406 O07 FJL 43
FJL O08 O8 O 0 1 N N N N N N 24.242 6.148 12.883 -8.667 2.322 -0.729 O08 FJL 44
FJL O09 O9 O 0 1 N N N N N N 24.112 4.879 16.981 -6.757 4.280 -0.229 O09 FJL 45
FJL O10 O10 O 0 1 N N N N N N 23.661 6.569 15.612 -5.262 3.319 1.085 O10 FJL 46
FJL H1 H1 H 0 1 N N N N N N 27.259 -0.064 18.929 0.990 0.118 -0.670 H1 FJL 47
FJL H2 H2 H 0 1 N N N N N N 26.900 -0.535 16.731 -0.668 -1.398 -1.295 H2 FJL 48
FJL H3 H3 H 0 1 N N N N N N 28.384 -3.582 17.921 1.337 -2.366 -1.754 H3 FJL 49
FJL H4 H4 H 0 1 N N N N N N 28.659 -1.873 17.443 2.089 -3.561 -0.679 H4 FJL 50
FJL H5 H5 H 0 1 N N N N N N 25.948 -3.339 17.369 0.115 -3.458 0.804 H5 FJL 51
FJL H6 H6 H 0 1 N N N N N N 26.985 -2.981 15.946 -0.339 -3.857 -0.858 H6 FJL 52
FJL H7 H7 H 0 1 N N N N N N 29.121 -1.020 23.643 5.613 1.089 1.130 H7 FJL 53
FJL H8 H8 H 0 1 N N N N N N 29.338 -3.709 20.689 4.342 -2.903 0.331 H8 FJL 54
FJL H9 H9 H 0 1 N N N N N N 30.284 -3.093 19.292 4.071 -2.864 -1.397 H9 FJL 55
FJL H10 H10 H 0 1 N N N N N N 25.507 1.290 18.038 -0.891 1.237 1.251 H10 FJL 56
FJL H11 H11 H 0 1 N N N N N N 24.179 0.694 19.091 -1.124 0.847 -0.470 H11 FJL 57
FJL H12 H12 H 0 1 N N N N N N 31.784 -3.324 21.199 5.854 -1.269 -1.740 H12 FJL 58
FJL H13 H13 H 0 1 N N N N N N 31.529 -1.573 20.886 6.457 -2.632 -0.780 H13 FJL 59
FJL H14 H14 H 0 1 N N N N N N 25.380 1.211 15.716 -3.162 -0.448 -1.187 H14 FJL 60
FJL H15 H15 H 0 1 N N N N N N 26.683 -3.064 21.048 2.702 -1.370 2.190 H15 FJL 61
FJL H16 H16 H 0 1 N N N N N N 26.054 -3.651 19.471 1.479 -2.638 1.941 H16 FJL 62
FJL H17 H17 H 0 1 N N N N N N 27.681 -4.161 20.034 3.160 -2.908 1.420 H17 FJL 63
FJL H18 H18 H 0 1 N N N N N N 23.233 1.613 17.019 -2.809 -0.255 1.840 H18 FJL 64
FJL H19 H19 H 0 1 N N N N N N 22.998 -0.168 17.038 -3.285 1.034 0.736 H19 FJL 65
FJL H20 H20 H 0 1 N N N N N N 23.930 -1.552 19.657 0.166 -0.580 2.785 H20 FJL 66
FJL H21 H21 H 0 1 N N N N N N 23.509 -1.860 17.938 -1.473 -1.205 2.485 H21 FJL 67
FJL H22 H22 H 0 1 N N N N N N 24.748 -2.872 18.754 -0.060 -2.259 2.239 H22 FJL 68
FJL H23 H23 H 0 1 N N N N N N 30.500 -0.206 19.874 2.499 0.308 -1.832 H23 FJL 69
FJL H24 H24 H 0 1 N N N N N N 29.903 -0.946 18.350 4.049 -0.389 -2.362 H24 FJL 70
FJL H25 H25 H 0 1 N N N N N N 28.923 0.307 19.184 2.567 -1.372 -2.418 H25 FJL 71
FJL H26 H26 H 0 1 N N N N N N 27.162 -0.135 22.725 3.601 1.633 1.699 H26 FJL 72
FJL H27 H27 H 0 1 N N N N N N 31.036 0.245 21.624 5.363 0.621 -1.888 H27 FJL 73
FJL H28 H28 H 0 1 N N N N N N 29.797 1.119 22.588 5.053 2.143 -1.031 H28 FJL 74
FJL H29 H29 H 0 1 N N N N N N 31.347 -2.328 24.703 8.031 0.118 1.053 H29 FJL 75
FJL H30 H30 H 0 1 N N N N N N 32.485 -2.938 23.453 8.287 -1.394 0.172 H30 FJL 76
FJL H31 H31 H 0 1 N N N N N N 23.363 -1.982 16.239 -3.689 -3.436 0.854 H31 FJL 77
FJL H32 H32 H 0 1 N N N N N N 23.447 -1.762 14.459 -1.978 -3.896 1.024 H32 FJL 78
FJL H33 H33 H 0 1 N N N N N N 24.480 -2.994 15.261 -2.612 -2.484 1.903 H33 FJL 79
FJL H34 H34 H 0 1 N N N N N N 26.844 -0.260 14.405 -2.501 -2.309 -2.362 H34 FJL 80
FJL H35 H35 H 0 1 N N N N N N 26.477 -2.007 14.206 -2.117 -3.849 -1.556 H35 FJL 81
FJL H36 H36 H 0 1 N N N N N N 25.444 -0.775 13.404 -3.764 -3.181 -1.460 H36 FJL 82
FJL H37 H37 H 0 1 N N N N N N 33.129 -0.751 24.531 9.031 0.586 -1.143 H37 FJL 83
FJL H38 H38 H 0 1 N N N N N N 33.032 -0.727 22.738 7.744 -0.321 -1.959 H38 FJL 84
FJL H39 H39 H 0 1 N N N N N N 29.374 -3.445 24.129 4.983 -1.729 1.836 H39 FJL 85
FJL H40 H40 H 0 1 N N N N N N 28.873 -3.679 22.420 6.639 -2.376 1.760 H40 FJL 86
FJL H41 H41 H 0 1 N N N N N N 30.370 -4.461 23.032 6.340 -0.780 2.488 H41 FJL 87
FJL H42 H42 H 0 1 N N N N N N 33.025 1.828 24.406 6.735 3.153 -2.589 H42 FJL 88
FJL H43 H43 H 0 1 N N N N N N 32.859 1.711 22.622 8.394 2.509 -2.641 H43 FJL 89
FJL H44 H44 H 0 1 N N N N N N 31.623 2.591 23.583 7.049 1.560 -3.320 H44 FJL 90
FJL H45 H45 H 0 1 N N N N N N 25.200 2.135 13.679 -5.359 -0.354 -1.538 H45 FJL 91
FJL H46 H46 H 0 1 N N N N N N 22.201 2.547 12.893 -7.047 -1.033 0.913 H46 FJL 92
FJL H47 H47 H 0 1 N N N N N N 24.853 3.829 11.858 -7.851 0.056 -1.825 H47 FJL 93
FJL H48 H48 H 0 1 N N N N N N 25.403 4.402 14.442 -6.169 1.937 -1.518 H48 FJL 94
FJL H49 H49 H 0 1 N N N N N N 22.549 5.108 13.493 -7.896 1.366 0.934 H49 FJL 95
FJL H50 H50 H 0 1 N N N N N N 30.462 -0.148 26.791 9.019 3.603 0.689 H50 FJL 96
FJL H51 H51 H 0 1 N N N N N N 23.270 0.668 12.010 -6.419 -2.892 -0.452 H51 FJL 97
FJL H52 H52 H 0 1 N N N N N N 23.260 5.114 10.704 -9.980 0.104 -0.740 H52 FJL 98
FJL H53 H53 H 0 1 N N N N N N 24.294 6.750 13.616 -8.586 3.226 -0.396 H53 FJL 99
FJL H54 H54 H 0 1 N N N N N N 23.895 5.516 17.652 -6.570 5.121 0.208 H54 FJL 100
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FJL O07 C43 SING N N 1
FJL O06 C42 SING N N 2
FJL C43 C42 SING N N 3
FJL C43 C45 SING N N 4
FJL C42 C41 SING N N 5
FJL O08 C45 SING N N 6
FJL C45 C44 SING N N 7
FJL C41 O01 SING N N 8
FJL C41 O04 SING N N 9
FJL C36 C17 SING N N 10
FJL O01 C25 SING N N 11
FJL C44 O04 SING N N 12
FJL C44 C46 SING N N 13
FJL C35 C17 SING N N 14
FJL C17 C25 SING N N 15
FJL C17 C15 SING N N 16
FJL O10 C46 DOUB N N 17
FJL C25 C28 SING N N 18
FJL C46 O09 SING N N 19
FJL C15 C18 SING N N 20
FJL C15 C12 SING N N 21
FJL C18 C16 SING N N 22
FJL C28 C23 SING N N 23
FJL C16 C11 SING N N 24
FJL C23 C12 SING N N 25
FJL C12 C29 SING N N 26
FJL C12 C13 SING N N 27
FJL C13 C11 SING N N 28
FJL C13 C26 SING N N 29
FJL C11 C27 SING N N 30
FJL C11 C14 SING N N 31
FJL C30 C14 SING N N 32
FJL C14 C22 SING N N 33
FJL C14 C19 SING N N 34
FJL C22 C24 SING N N 35
FJL C26 O02 DOUB N N 36
FJL C26 C31 SING N N 37
FJL C24 C21 SING N N 38
FJL C19 C31 DOUB N N 39
FJL C19 C20 SING N N 40
FJL C32 C20 SING N N 41
FJL C32 C34 SING N N 42
FJL C20 C21 SING N N 43
FJL C21 C38 SING N N 44
FJL C21 C33 SING N N 45
FJL C39 C34 SING N N 46
FJL C37 C33 SING N N 47
FJL C37 C34 SING N N 48
FJL C34 C40 SING N N 49
FJL C40 O05 DOUB N N 50
FJL C40 O03 SING N N 51
FJL C13 H1 SING N N 52
FJL C15 H2 SING N N 53
FJL C16 H3 SING N N 54
FJL C16 H4 SING N N 55
FJL C18 H5 SING N N 56
FJL C18 H6 SING N N 57
FJL C20 H7 SING N N 58
FJL C22 H8 SING N N 59
FJL C22 H9 SING N N 60
FJL C23 H10 SING N N 61
FJL C23 H11 SING N N 62
FJL C24 H12 SING N N 63
FJL C24 H13 SING N N 64
FJL C25 H14 SING N N 65
FJL C27 H15 SING N N 66
FJL C27 H16 SING N N 67
FJL C27 H17 SING N N 68
FJL C28 H18 SING N N 69
FJL C28 H19 SING N N 70
FJL C29 H20 SING N N 71
FJL C29 H21 SING N N 72
FJL C29 H22 SING N N 73
FJL C30 H23 SING N N 74
FJL C30 H24 SING N N 75
FJL C30 H25 SING N N 76
FJL C31 H26 SING N N 77
FJL C32 H27 SING N N 78
FJL C32 H28 SING N N 79
FJL C33 H29 SING N N 80
FJL C33 H30 SING N N 81
FJL C35 H31 SING N N 82
FJL C35 H32 SING N N 83
FJL C35 H33 SING N N 84
FJL C36 H34 SING N N 85
FJL C36 H35 SING N N 86
FJL C36 H36 SING N N 87
FJL C37 H37 SING N N 88
FJL C37 H38 SING N N 89
FJL C38 H39 SING N N 90
FJL C38 H40 SING N N 91
FJL C38 H41 SING N N 92
FJL C39 H42 SING N N 93
FJL C39 H43 SING N N 94
FJL C39 H44 SING N N 95
FJL C41 H45 SING N N 96
FJL C42 H46 SING N N 97
FJL C43 H47 SING N N 98
FJL C44 H48 SING N N 99
FJL C45 H49 SING N N 100
FJL O03 H50 SING N N 101
FJL O06 H51 SING N N 102
FJL O07 H52 SING N N 103
FJL O08 H53 SING N N 104
FJL O09 H54 SING N N 105
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FJL InChI InChI 1.03 InChI=1S/C36H54O10/c1-31(2)21-8-11-36(7)27(34(21,5)10-9-22(31)45-29-25(40)23(38)24(39)26(46-29)28(41)42)20(37)16-18-19-17-33(4,30(43)44)13-12-32(19,3)14-15-35(18,36)6/h16,19,21-27,29,38-40H,8-15,17H2,1-7H3,(H,41,42)(H,43,44)/t19-,21-,22-,23-,24-,25+,26-,27+,29+,32+,33-,34-,35+,36+/m0/s1
FJL InChIKey InChI 1.03 HLDYLAJAWSKPFZ-QDPIGISRSA-N
FJL SMILES_CANONICAL CACTVS 3.385 CC1(C)[C@H](CC[C@@]2(C)[C@H]1CC[C@]3(C)[C@@H]2C(=O)C=C4[C@@H]5C[C@](C)(CC[C@]5(C)CC[C@@]34C)C(O)=O)O[C@@H]6O[C@@H]([C@@H](O)[C@H](O)[C@H]6O)C(O)=O
FJL SMILES CACTVS 3.385 CC1(C)[CH](CC[C]2(C)[CH]1CC[C]3(C)[CH]2C(=O)C=C4[CH]5C[C](C)(CC[C]5(C)CC[C]34C)C(O)=O)O[CH]6O[CH]([CH](O)[CH](O)[CH]6O)C(O)=O
FJL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 C[C@]12CC[C@](C[C@H]1C3=CC(=O)[C@@H]4[C@]5(CC[C@@H](C([C@@H]5CC[C@]4([C@@]3(CC2)C)C)(C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)C(=O)O)O)O)O)C)(C)C(=O)O
FJL SMILES "OpenEye OEToolkits" 2.0.7 CC1(C2CCC3(C(C2(CCC1OC4C(C(C(C(O4)C(=O)O)O)O)O)C)C(=O)C=C5C3(CCC6(C5CC(CC6)(C)C(=O)O)C)C)C)C
#
_pdbx_chem_comp_identifier.comp_id FJL
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"(2~{S},3~{S},4~{S},5~{R},6~{R})-6-[[(3~{S},4~{a}~{R},6~{a}~{R},6~{b}~{S},8~{a}~{S},11~{S},12~{a}~{R},14~{a}~{R},14~{b}~{S})-11-carboxy-4,4,6~{a},6~{b},8~{a},11,14~{b}-heptamethyl-14-oxidanylidene-2,3,4~{a},5,6,7,8,9,10,12,12~{a},14~{a}-dodecahydro-1~{H}-picen-3-yl]oxy]-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FJL 'Create component' 2020-05-22 PDBJ
FJL 'Initial release' 2021-05-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
FJL C11 C 11.652 1.205 1
FJL C12 C 10.338 -1.113 2
FJL C13 C 10.356 0.450 3
FJL C14 C 11.646 2.705 4
FJL C15 C 11.688 -1.899 5
FJL C16 C 13.020 0.450 6
FJL C17 C 11.707 -3.526 7
FJL C18 C 13.038 -1.113 8
FJL C19 C 10.345 3.450 9
FJL C20 C 10.314 5.012 10
FJL C21 C 11.658 5.809 11
FJL C22 C 13.008 3.470 12
FJL C23 C 8.913 -1.899 13
FJL C24 C 13.014 5.033 14
FJL C25 C 10.301 -4.346 15
FJL C26 C 9.054 1.195 16
FJL C27 C 13.128 1.471 17
FJL C28 C 8.894 -3.526 18
FJL C29 C 9.042 -0.357 19
FJL C30 C 13.125 2.450 20
FJL C31 C 9.048 2.695 21
FJL C32 C 8.883 5.787 22
FJL C33 C 11.665 7.436 23
FJL C34 C 8.852 7.415 24
FJL C35 C 12.467 -4.819 25
FJL C36 C 13.207 -3.515 26
FJL C37 C 10.252 8.245 27
FJL C38 C 12.949 6.574 28
FJL C39 C 7.352 7.391 29
FJL C40 C 8.082 8.702 30
FJL C41 C 9.002 -6.596 31
FJL C42 C 9.002 -8.095 32
FJL C43 C 7.702 -8.845 33
FJL C44 C 6.404 -6.596 34
FJL C45 C 6.404 -8.095 35
FJL C46 C 5.104 -5.846 36
FJL O01 O 10.301 -5.846 37
FJL O02 O 7.758 0.440 38
FJL O03 O 6.582 8.679 39
FJL O04 O 7.702 -5.846 40
FJL O05 O 8.812 10.012 41
FJL O06 O 10.301 -8.845 42
FJL O07 O 7.702 -10.345 43
FJL O08 O 5.104 -8.845 44
FJL O09 O 5.104 -4.346 45
FJL O10 O 3.805 -6.596 46
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
FJL C43 O07 SINGLE BEGINWEDGE 1
FJL C42 O06 SINGLE BEGINDASH 2
FJL C43 C42 SINGLE NONE 3
FJL C43 C45 SINGLE NONE 4
FJL C42 C41 SINGLE NONE 5
FJL C45 O08 SINGLE BEGINDASH 6
FJL C45 C44 SINGLE NONE 7
FJL C41 O01 SINGLE BEGINWEDGE 8
FJL C41 O04 SINGLE NONE 9
FJL C36 C17 SINGLE NONE 10
FJL C25 O01 SINGLE BEGINWEDGE 11
FJL C44 O04 SINGLE NONE 12
FJL C44 C46 SINGLE BEGINWEDGE 13
FJL C35 C17 SINGLE NONE 14
FJL C17 C25 SINGLE NONE 15
FJL C17 C15 SINGLE NONE 16
FJL O10 C46 DOUBLE NONE 17
FJL C25 C28 SINGLE NONE 18
FJL C46 O09 SINGLE NONE 19
FJL C15 C18 SINGLE NONE 20
FJL C15 C12 SINGLE NONE 21
FJL C18 C16 SINGLE NONE 22
FJL C28 C23 SINGLE NONE 23
FJL C16 C11 SINGLE NONE 24
FJL C23 C12 SINGLE NONE 25
FJL C12 C29 SINGLE BEGINWEDGE 26
FJL C12 C13 SINGLE NONE 27
FJL C13 C11 SINGLE NONE 28
FJL C13 C26 SINGLE NONE 29
FJL C11 C27 SINGLE BEGINWEDGE 30
FJL C11 C14 SINGLE NONE 31
FJL C14 C30 SINGLE BEGINDASH 32
FJL C14 C22 SINGLE NONE 33
FJL C14 C19 SINGLE NONE 34
FJL C22 C24 SINGLE NONE 35
FJL C26 O02 DOUBLE NONE 36
FJL C26 C31 SINGLE NONE 37
FJL C24 C21 SINGLE NONE 38
FJL C19 C31 DOUBLE NONE 39
FJL C19 C20 SINGLE NONE 40
FJL C32 C20 SINGLE NONE 41
FJL C32 C34 SINGLE NONE 42
FJL C20 C21 SINGLE NONE 43
FJL C21 C38 SINGLE BEGINWEDGE 44
FJL C21 C33 SINGLE NONE 45
FJL C34 C39 SINGLE BEGINDASH 46
FJL C37 C33 SINGLE NONE 47
FJL C37 C34 SINGLE NONE 48
FJL C34 C40 SINGLE NONE 49
FJL C40 O05 DOUBLE NONE 50
FJL C40 O03 SINGLE NONE 51
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
FJL MurckoScaffold S1 scaffold 'O=C1C=C2C(CCC3CCCC[C@@H]23)C2CC[C@H]3C[C@@H](O[C@H]4CCCCO4)CCC3[C@@H]12' InChI=1S/C27H40O3/c28-25-16-24-20-6-2-1-5-17(20)8-11-22(24)23-12-9-18-15-19(10-13-21(18)27(23)25)30-26-7-3-4-14-29-26/h16-23,26-27H,1-15H2/t17?,18-,19-,20+,21?,22?,23?,26-,27+/m0/s1 WVDDQHJSXKZYBA-FRPJZTSJSA-N
FJL cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
FJL pyranose F2 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
FJL C11 S1 1
FJL C12 S1 1
FJL C13 S1 1
FJL C14 S1 1
FJL C15 S1 1
FJL C16 S1 1
FJL C17 S1 1
FJL C18 S1 1
FJL C19 S1 1
FJL C20 S1 1
FJL C21 S1 1
FJL C22 S1 1
FJL C23 S1 1
FJL C24 S1 1
FJL C25 S1 1
FJL C26 S1 1
FJL C28 S1 1
FJL C31 S1 1
FJL C32 S1 1
FJL C33 S1 1
FJL C34 S1 1
FJL C37 S1 1
FJL C41 S1 1
FJL C42 S1 1
FJL C43 S1 1
FJL C44 S1 1
FJL C45 S1 1
FJL O01 S1 1
FJL O02 S1 1
FJL O04 S1 1
FJL C11 F1 1
FJL C16 F1 1
FJL C18 F1 1
FJL C15 F1 1
FJL C12 F1 1
FJL C13 F1 1
FJL C12 F1 2
FJL C15 F1 2
FJL C17 F1 2
FJL C25 F1 2
FJL C28 F1 2
FJL C23 F1 2
FJL C14 F1 3
FJL C22 F1 3
FJL C24 F1 3
FJL C21 F1 3
FJL C20 F1 3
FJL C19 F1 3
FJL C20 F1 4
FJL C32 F1 4
FJL C34 F1 4
FJL C37 F1 4
FJL C33 F1 4
FJL C21 F1 4
FJL C45 F2 1
FJL C44 F2 1
FJL O04 F2 1
FJL C41 F2 1
FJL C42 F2 1
FJL C43 F2 1
FJL O01 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id FJL
_pdbe_chem_comp_rdkit_properties.exactmw 646.372
_pdbe_chem_comp_rdkit_properties.amw 646.818
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 46
_pdbe_chem_comp_rdkit_properties.NumAtoms 100
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.861
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 6
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 5
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 14
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 347.772
_pdbe_chem_comp_rdkit_properties.tpsa 170.820
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.329
_pdbe_chem_comp_rdkit_properties.CrippenMR 166.255
_pdbe_chem_comp_rdkit_properties.chi0v 22.082
_pdbe_chem_comp_rdkit_properties.chi1v 12.199
_pdbe_chem_comp_rdkit_properties.chi2v 7.480
_pdbe_chem_comp_rdkit_properties.chi3v 7.480
_pdbe_chem_comp_rdkit_properties.chi4v 5.138
_pdbe_chem_comp_rdkit_properties.chi0n 76.082
_pdbe_chem_comp_rdkit_properties.chi1n 38.741
_pdbe_chem_comp_rdkit_properties.chi2n 7.480
_pdbe_chem_comp_rdkit_properties.chi3n 7.480
_pdbe_chem_comp_rdkit_properties.chi4n 5.138
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.850
_pdbe_chem_comp_rdkit_properties.kappa1 7.726
_pdbe_chem_comp_rdkit_properties.kappa2 10.573
_pdbe_chem_comp_rdkit_properties.kappa3 4.485
_pdbe_chem_comp_rdkit_properties.Phi 1.776
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
FJL UniChem PDBe FJL
FJL UniChem ChEBI 189708
FJL UniChem ZINC ZINC000067915227
FJL UniChem 'PubChem TPHARMA' 14863543
FJL UniChem PubChem 161800
FJL UniChem ACTor 34096-83-8
FJL UniChem Nikkaji J396.653D
FJL UniChem MetaboLights MTBLC189708
FJL UniChem BRENDA 131142
FJL UniChem BRENDA 233061
FJL UniChem BRENDA 233208
FJL UniChem ChemicalBook CB7282292
FJL UniChem MedChemExpress HY-N6851
FJL UniChem 'Probes And Drugs' PD125090
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
FJL C11 -1.345 -0.078 1.081 ETKDGv3 1
FJL C12 1.009 -0.731 -0.102 ETKDGv3 2
FJL C13 -0.537 -0.359 -0.253 ETKDGv3 3
FJL C14 -2.779 0.553 0.675 ETKDGv3 4
FJL C15 1.663 0.348 0.851 ETKDGv3 5
FJL C16 -0.534 0.883 2.000 ETKDGv3 6
FJL C17 3.243 0.331 0.949 ETKDGv3 7
FJL C18 0.923 0.446 2.208 ETKDGv3 8
FJL C19 -3.535 -0.468 -0.192 ETKDGv3 9
FJL C20 -5.059 -0.561 -0.217 ETKDGv3 10
FJL C21 -5.767 -0.139 1.115 ETKDGv3 11
FJL C22 -3.596 0.956 1.949 ETKDGv3 12
FJL C23 1.714 -0.585 -1.494 ETKDGv3 13
FJL C24 -5.100 1.124 1.713 ETKDGv3 14
FJL C25 3.842 0.413 -0.493 ETKDGv3 15
FJL C26 -1.378 -1.260 -1.150 ETKDGv3 16
FJL C27 -1.568 -1.412 1.885 ETKDGv3 17
FJL C28 3.247 -0.649 -1.433 ETKDGv3 18
FJL C29 1.184 -2.202 0.395 ETKDGv3 19
FJL C30 -2.654 1.841 -0.206 ETKDGv3 20
FJL C31 -2.853 -1.233 -1.073 ETKDGv3 21
FJL C32 -5.645 0.202 -1.426 ETKDGv3 22
FJL C33 -7.281 0.191 0.868 ETKDGv3 23
FJL C34 -7.148 -0.161 -1.671 ETKDGv3 24
FJL C35 3.737 1.592 1.713 ETKDGv3 25
FJL C36 3.795 -0.902 1.711 ETKDGv3 26
FJL C37 -7.861 -0.557 -0.341 ETKDGv3 27
FJL C38 -5.682 -1.312 2.126 ETKDGv3 28
FJL C39 -7.849 1.068 -2.295 ETKDGv3 29
FJL C40 -7.271 -1.330 -2.637 ETKDGv3 30
FJL C41 5.934 0.833 -1.531 ETKDGv3 31
FJL C42 6.806 2.012 -1.047 ETKDGv3 32
FJL C43 8.000 1.524 -0.205 ETKDGv3 33
FJL C44 7.749 -0.711 -1.432 ETKDGv3 34
FJL C45 8.734 0.359 -0.897 ETKDGv3 35
FJL C46 7.228 -1.676 -0.390 ETKDGv3 36
FJL O01 5.251 0.252 -0.427 ETKDGv3 37
FJL O02 -0.847 -2.022 -1.999 ETKDGv3 38
FJL O03 -8.451 -1.523 -3.353 ETKDGv3 39
FJL O04 6.700 -0.152 -2.216 ETKDGv3 40
FJL O05 -6.344 -2.178 -2.744 ETKDGv3 41
FJL O06 7.241 2.812 -2.121 ETKDGv3 42
FJL O07 7.559 1.110 1.064 ETKDGv3 43
FJL O08 9.500 0.845 -1.971 ETKDGv3 44
FJL O09 7.774 -1.716 0.890 ETKDGv3 45
FJL O10 6.321 -2.494 -0.702 ETKDGv3 46
FJL H1 -0.494 0.605 -0.792 ETKDGv3 47
FJL H2 1.451 1.326 0.357 ETKDGv3 48
FJL H3 -1.018 0.960 2.998 ETKDGv3 49
FJL H4 -0.508 1.908 1.587 ETKDGv3 50
FJL H5 0.979 -0.498 2.782 ETKDGv3 51
FJL H6 1.382 1.221 2.851 ETKDGv3 52
FJL H7 -5.301 -1.637 -0.381 ETKDGv3 53
FJL H8 -3.486 0.242 2.779 ETKDGv3 54
FJL H9 -3.205 1.917 2.350 ETKDGv3 55
FJL H10 1.397 -1.383 -2.192 ETKDGv3 56
FJL H11 1.435 0.384 -1.966 ETKDGv3 57
FJL H12 -5.278 2.004 1.063 ETKDGv3 58
FJL H13 -5.581 1.369 2.687 ETKDGv3 59
FJL H14 3.570 1.419 -0.897 ETKDGv3 60
FJL H15 -0.632 -1.914 2.155 ETKDGv3 61
FJL H16 -2.042 -1.247 2.868 ETKDGv3 62
FJL H17 -2.181 -2.151 1.334 ETKDGv3 63
FJL H18 3.600 -1.659 -1.150 ETKDGv3 64
FJL H19 3.630 -0.476 -2.462 ETKDGv3 65
FJL H20 1.990 -2.746 -0.132 ETKDGv3 66
FJL H21 0.277 -2.814 0.216 ETKDGv3 67
FJL H22 1.421 -2.264 1.473 ETKDGv3 68
FJL H23 -2.306 1.624 -1.237 ETKDGv3 69
FJL H24 -3.634 2.331 -0.352 ETKDGv3 70
FJL H25 -1.998 2.609 0.241 ETKDGv3 71
FJL H26 -3.395 -1.902 -1.733 ETKDGv3 72
FJL H27 -5.048 0.006 -2.345 ETKDGv3 73
FJL H28 -5.538 1.290 -1.230 ETKDGv3 74
FJL H29 -7.890 -0.048 1.768 ETKDGv3 75
FJL H30 -7.431 1.278 0.688 ETKDGv3 76
FJL H31 4.834 1.722 1.605 ETKDGv3 77
FJL H32 3.250 2.513 1.328 ETKDGv3 78
FJL H33 3.547 1.515 2.804 ETKDGv3 79
FJL H34 4.876 -0.772 1.936 ETKDGv3 80
FJL H35 3.716 -1.836 1.127 ETKDGv3 81
FJL H36 3.274 -1.039 2.681 ETKDGv3 82
FJL H37 -8.954 -0.358 -0.406 ETKDGv3 83
FJL H38 -7.757 -1.648 -0.149 ETKDGv3 84
FJL H39 -6.051 -1.001 3.127 ETKDGv3 85
FJL H40 -6.301 -2.169 1.784 ETKDGv3 86
FJL H41 -4.641 -1.681 2.233 ETKDGv3 87
FJL H42 -7.790 1.945 -1.616 ETKDGv3 88
FJL H43 -7.367 1.341 -3.259 ETKDGv3 89
FJL H44 -8.925 0.865 -2.488 ETKDGv3 90
FJL H45 5.238 1.258 -2.292 ETKDGv3 91
FJL H46 6.171 2.662 -0.406 ETKDGv3 92
FJL H47 8.720 2.367 -0.076 ETKDGv3 93
FJL H48 8.343 -1.350 -2.121 ETKDGv3 94
FJL H49 9.426 -0.120 -0.165 ETKDGv3 95
FJL H50 -8.558 -2.314 -3.977 ETKDGv3 96
FJL H51 7.589 2.218 -2.835 ETKDGv3 97
FJL H52 7.394 1.931 1.596 ETKDGv3 98
FJL H53 10.299 1.288 -1.581 ETKDGv3 99
FJL H54 7.430 -2.372 1.581 ETKDGv3 100
#