data_FNR
#
_chem_comp.id FNR
_chem_comp.name
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H23 N4 O9 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-02-10
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 458.360
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code FNR
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2FZ5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FNR C9A C9A C 0 1 Y N N N N N 13.487 -31.798 6.752 2.624 1.212 -0.293 C9A FNR 1
FNR N10 N10 N 0 1 N N N N N N 12.490 -31.584 5.746 2.114 -0.053 -0.627 N10 FNR 2
FNR CAA C10A C 0 1 N N N N N N 12.482 -32.382 4.579 2.861 -1.181 -0.366 CAA FNR 3
FNR N1 N1 N 0 1 N N N N N N 11.532 -32.141 3.631 2.520 -2.388 -0.928 N1 FNR 4
FNR C2 C2 C 0 1 N N N N N N 11.448 -32.891 2.541 3.253 -3.487 -0.669 C2 FNR 5
FNR O2 O2 O 0 1 N N N N N N 10.585 -32.633 1.700 2.938 -4.548 -1.174 O2 FNR 6
FNR N3 N3 N 0 1 N N N N N N 12.316 -33.926 2.314 4.328 -3.433 0.138 N3 FNR 7
FNR C4 C4 C 0 1 N N N N N N 13.323 -34.216 3.259 4.699 -2.270 0.710 C4 FNR 8
FNR O4 O4 O 0 1 N N N N N N 14.045 -35.170 3.102 5.675 -2.226 1.441 O4 FNR 9
FNR C4A C4A C 0 1 N N N N N N 13.396 -33.407 4.424 3.952 -1.109 0.456 C4A FNR 10
FNR N5 N5 N 0 1 N N N N N N 14.388 -33.654 5.405 4.319 0.129 1.039 N5 FNR 11
FNR C5A C5A C 0 1 Y N N N N N 14.438 -32.831 6.552 3.735 1.305 0.546 C5A FNR 12
FNR C6 C6 C 0 1 Y N N N N N 15.460 -33.086 7.476 4.247 2.546 0.881 C6 FNR 13
FNR C7 C7 C 0 1 Y N N N N N 15.525 -32.299 8.636 3.655 3.693 0.381 C7 FNR 14
FNR C7M C7M C 0 1 N N N N N N 16.663 -32.638 9.610 4.211 5.046 0.744 C7M FNR 15
FNR C8 C8 C 0 1 Y N N N N N 14.574 -31.263 8.860 2.555 3.601 -0.450 C8 FNR 16
FNR C8M C8M C 0 1 N N N N N N 14.590 -30.345 10.097 1.916 4.855 -0.990 C8M FNR 17
FNR C9 C9 C 0 1 Y N N N N N 13.559 -31.012 7.924 2.040 2.362 -0.793 C9 FNR 18
FNR "C1'" "C1'" C 0 1 N N N N N N 11.398 -30.600 5.938 0.792 -0.174 -1.248 "C1'" FNR 19
FNR "C2'" "C2'" C 0 1 N N S N N N 10.232 -31.152 6.761 -0.284 -0.180 -0.160 "C2'" FNR 20
FNR "O2'" "O2'" O 0 1 N N N N N N 9.625 -32.278 6.103 -0.140 -1.352 0.645 "O2'" FNR 21
FNR "C3'" "C3'" C 0 1 N N S N N N 9.208 -30.051 7.006 -1.668 -0.176 -0.812 "C3'" FNR 22
FNR "O3'" "O3'" O 0 1 N N N N N N 9.861 -28.833 7.421 -1.811 0.996 -1.617 "O3'" FNR 23
FNR "C4'" "C4'" C 0 1 N N R N N N 8.159 -30.482 8.043 -2.744 -0.183 0.275 "C4'" FNR 24
FNR "O4'" "O4'" O 0 1 N N N N N N 7.018 -29.632 7.903 -2.601 -1.355 1.080 "O4'" FNR 25
FNR "C5'" "C5'" C 0 1 N N N N N N 8.675 -30.448 9.484 -4.128 -0.178 -0.377 "C5'" FNR 26
FNR "O5'" "O5'" O 0 1 N N N N N N 9.478 -31.597 9.743 -5.131 -0.067 0.635 "O5'" FNR 27
FNR P P P 0 1 N N N N N N 10.033 -31.845 11.213 -6.707 -0.032 0.307 P FNR 28
FNR O1P O1P O 0 1 N N N N N N 11.009 -30.591 11.333 -7.052 1.301 -0.528 O1P FNR 29
FNR O2P O2P O 0 1 N N N N N N 10.804 -33.100 11.206 -7.072 -1.223 -0.492 O2P FNR 30
FNR O3P O3P O 0 1 N N N N N N 8.915 -31.673 12.183 -7.542 -0.033 1.684 O3P FNR 31
FNR HN1 HN1 H 0 1 N N N N N N 10.888 -31.387 3.760 1.748 -2.448 -1.513 HN1 FNR 32
FNR H3 H3 H 0 1 N N N N N N 12.236 -34.474 1.481 4.840 -4.239 0.310 H3 FNR 33
FNR H5 H5 H 0 1 N N N N N N 15.043 -34.400 5.287 4.962 0.162 1.765 H5 FNR 34
FNR H7 H7 H 0 1 N N N N N N 16.181 -33.870 7.299 5.107 2.619 1.531 H7 FNR 35
FNR H7M1 H7M1 H 0 0 N N N N N N 17.554 -32.047 9.353 4.966 5.336 0.014 H7M1 FNR 36
FNR H7M2 H7M2 H 0 0 N N N N N N 16.349 -32.401 10.637 3.406 5.781 0.747 H7M2 FNR 37
FNR H7M3 H7M3 H 0 0 N N N N N N 16.901 -33.710 9.537 4.663 4.999 1.735 H7M3 FNR 38
FNR H8M1 H8M1 H 0 0 N N N N N N 15.212 -29.461 9.891 2.383 5.121 -1.939 H8M1 FNR 39
FNR H8M2 H8M2 H 0 0 N N N N N N 13.564 -30.025 10.329 0.851 4.682 -1.146 H8M2 FNR 40
FNR H8M3 H8M3 H 0 0 N N N N N N 15.006 -30.893 10.955 2.051 5.668 -0.277 H8M3 FNR 41
FNR H9 H9 H 0 1 N N N N N N 12.840 -30.225 8.098 1.183 2.294 -1.446 H9 FNR 42
FNR "H1'1" "H1'1" H 0 0 N N N N N N 11.807 -29.720 6.456 0.627 0.671 -1.917 "H1'1" FNR 43
FNR "H1'2" "H1'2" H 0 0 N N N N N N 11.019 -30.301 4.950 0.741 -1.103 -1.815 "H1'2" FNR 44
FNR H6 H6 H 0 1 N N N N N N 10.627 -31.473 7.736 -0.174 0.706 0.465 H6 FNR 45
FNR "H2'" "H2'" H 0 1 N N N N N N 8.905 -32.604 6.631 -0.190 -2.180 0.147 "H2'" FNR 46
FNR H4 H4 H 0 1 N N N N N N 8.682 -29.865 6.058 -1.778 -1.062 -1.438 H4 FNR 47
FNR "H3'" "H3'" H 0 1 N N N N N N 9.209 -28.158 7.569 -1.725 1.824 -1.125 "H3'" FNR 48
FNR H2 H2 H 0 1 N N N N N N 7.867 -31.518 7.814 -2.634 0.703 0.900 H2 FNR 49
FNR "H4'" "H4'" H 0 1 N N N N N N 6.356 -29.883 8.537 -2.687 -2.183 0.588 "H4'" FNR 50
FNR "H5'1" "H5'1" H 0 0 N N N N N N 9.279 -29.541 9.633 -4.206 0.668 -1.060 "H5'1" FNR 51
FNR "H5'2" "H5'2" H 0 0 N N N N N N 7.820 -30.438 10.177 -4.272 -1.106 -0.931 "H5'2" FNR 52
FNR H1 H1 H 0 1 N N N N N N 11.909 -30.893 11.378 -6.839 2.122 -0.064 H1 FNR 53
FNR H3P H3P H 0 1 N N N N N N 8.834 -32.455 12.716 -8.501 -0.013 1.563 H3P FNR 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FNR C9A N10 SING N N 1
FNR C9A C5A DOUB Y N 2
FNR C9A C9 SING Y N 3
FNR N10 CAA SING N N 4
FNR N10 "C1'" SING N N 5
FNR CAA N1 SING N N 6
FNR CAA C4A DOUB N N 7
FNR N1 C2 SING N N 8
FNR N1 HN1 SING N N 9
FNR C2 O2 DOUB N N 10
FNR C2 N3 SING N N 11
FNR N3 C4 SING N N 12
FNR N3 H3 SING N N 13
FNR C4 O4 DOUB N N 14
FNR C4 C4A SING N N 15
FNR C4A N5 SING N N 16
FNR N5 C5A SING N N 17
FNR N5 H5 SING N N 18
FNR C5A C6 SING Y N 19
FNR C6 C7 DOUB Y N 20
FNR C6 H7 SING N N 21
FNR C7 C7M SING N N 22
FNR C7 C8 SING Y N 23
FNR C7M H7M1 SING N N 24
FNR C7M H7M2 SING N N 25
FNR C7M H7M3 SING N N 26
FNR C8 C8M SING N N 27
FNR C8 C9 DOUB Y N 28
FNR C8M H8M1 SING N N 29
FNR C8M H8M2 SING N N 30
FNR C8M H8M3 SING N N 31
FNR C9 H9 SING N N 32
FNR "C1'" "C2'" SING N N 33
FNR "C1'" "H1'1" SING N N 34
FNR "C1'" "H1'2" SING N N 35
FNR "C2'" "O2'" SING N N 36
FNR "C2'" "C3'" SING N N 37
FNR "C2'" H6 SING N N 38
FNR "O2'" "H2'" SING N N 39
FNR "C3'" "O3'" SING N N 40
FNR "C3'" "C4'" SING N N 41
FNR "C3'" H4 SING N N 42
FNR "O3'" "H3'" SING N N 43
FNR "C4'" "O4'" SING N N 44
FNR "C4'" "C5'" SING N N 45
FNR "C4'" H2 SING N N 46
FNR "O4'" "H4'" SING N N 47
FNR "C5'" "O5'" SING N N 48
FNR "C5'" "H5'1" SING N N 49
FNR "C5'" "H5'2" SING N N 50
FNR "O5'" P SING N N 51
FNR P O1P SING N N 52
FNR P O2P DOUB N N 53
FNR P O3P SING N N 54
FNR O1P H1 SING N N 55
FNR O3P H3P SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FNR SMILES ACDLabs 12.01 c23N(C=1NC(=O)NC(=O)C=1Nc2cc(C)c(C)c3)CC(O)C(O)C(O)COP(O)(=O)O
FNR InChI InChI 1.03 InChI=1S/C17H23N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,18,22-24H,5-6H2,1-2H3,(H2,27,28,29)(H2,19,20,25,26)/t11-,12+,14-/m0/s1
FNR InChIKey InChI 1.03 YTNIXZGTHTVJBW-SCRDCRAPSA-N
FNR SMILES_CANONICAL CACTVS 3.385 Cc1cc2NC3=C(NC(=O)NC3=O)N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)c2cc1C
FNR SMILES CACTVS 3.385 Cc1cc2NC3=C(NC(=O)NC3=O)N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1C
FNR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 Cc1cc2c(cc1C)N(C3=C(N2)C(=O)NC(=O)N3)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
FNR SMILES "OpenEye OEToolkits" 1.7.6 Cc1cc2c(cc1C)N(C3=C(N2)C(=O)NC(=O)N3)CC(C(C(COP(=O)(O)O)O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FNR "SYSTEMATIC NAME" ACDLabs 12.01 1-deoxy-1-(7,8-dimethyl-2,4-dioxo-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl)-5-O-phosphono-D-ribitol
FNR "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4S)-5-[7,8-dimethyl-2,4-bis(oxidanylidene)-1,5-dihydrobenzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FNR 'Create component' 2006-02-10 RCSB
FNR 'Modify descriptor' 2011-06-04 RCSB
FNR 'Modify aromatic_flag' 2016-02-17 RCSB
FNR 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id FNR
_pdbx_chem_comp_synonyms.name "TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id FNR
_pdbe_chem_comp_synonyms.name 'TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
FNR C9A C 7.563 3.582 1
FNR N10 N 8.862 2.832 2
FNR CAA C 10.161 3.582 3
FNR N1 N 11.502 2.780 4
FNR C2 C 12.861 3.550 5
FNR O2 O 14.157 2.795 6
FNR N3 N 12.861 5.113 7
FNR C4 C 11.502 5.884 8
FNR O4 O 11.485 7.383 9
FNR C4A C 10.161 5.082 10
FNR N5 N 8.862 5.832 11
FNR C5A C 7.563 5.082 12
FNR C6 C 6.222 5.884 13
FNR C7 C 4.863 5.113 14
FNR C7M C 3.567 5.868 15
FNR C8 C 4.863 3.550 16
FNR C8M C 3.567 2.795 17
FNR C9 C 6.222 2.780 18
FNR "C1'" C 8.862 1.332 19
FNR "C2'" C 7.563 0.582 20
FNR "O2'" O 6.264 1.332 21
FNR "C3'" C 7.563 -0.918 22
FNR "O3'" O 8.862 -1.668 23
FNR "C4'" C 6.264 -1.668 24
FNR "O4'" O 4.965 -0.918 25
FNR "C5'" C 6.264 -3.168 26
FNR "O5'" O 4.965 -3.918 27
FNR P P 4.965 -5.418 28
FNR O1P O 4.965 -6.918 29
FNR O2P O 3.465 -5.418 30
FNR O3P O 6.465 -5.418 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
FNR C9A N10 SINGLE NONE 1
FNR C9A C5A DOUBLE NONE 2
FNR C9A C9 SINGLE NONE 3
FNR N10 CAA SINGLE NONE 4
FNR N10 "C1'" SINGLE NONE 5
FNR CAA N1 SINGLE NONE 6
FNR CAA C4A DOUBLE NONE 7
FNR N1 C2 SINGLE NONE 8
FNR C2 O2 DOUBLE NONE 9
FNR C2 N3 SINGLE NONE 10
FNR N3 C4 SINGLE NONE 11
FNR C4 O4 DOUBLE NONE 12
FNR C4 C4A SINGLE NONE 13
FNR C4A N5 SINGLE NONE 14
FNR N5 C5A SINGLE NONE 15
FNR C5A C6 SINGLE NONE 16
FNR C6 C7 DOUBLE NONE 17
FNR C7 C7M SINGLE NONE 18
FNR C7 C8 SINGLE NONE 19
FNR C8 C8M SINGLE NONE 20
FNR C8 C9 DOUBLE NONE 21
FNR "C1'" "C2'" SINGLE NONE 22
FNR "C2'" "O2'" SINGLE BEGINWEDGE 23
FNR "C2'" "C3'" SINGLE NONE 24
FNR "C3'" "O3'" SINGLE BEGINDASH 25
FNR "C3'" "C4'" SINGLE NONE 26
FNR "C4'" "O4'" SINGLE BEGINWEDGE 27
FNR "C4'" "C5'" SINGLE NONE 28
FNR "C5'" "O5'" SINGLE NONE 29
FNR "O5'" P SINGLE NONE 30
FNR P O1P SINGLE NONE 31
FNR P O2P DOUBLE NONE 32
FNR P O3P SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
FNR MurckoScaffold S1 scaffold 'O=c1[nH]c2c(c(=O)[nH]1)Nc1ccccc1N2' InChI=1S/C10H8N4O2/c15-9-7-8(13-10(16)14-9)12-6-4-2-1-3-5(6)11-7/h1-4,11H,(H3,12,13,14,15,16) ICNWIVGGVNHRNQ-UHFFFAOYSA-N
FNR phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
FNR phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
FNR pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
FNR C9A S1 1
FNR N10 S1 1
FNR CAA S1 1
FNR N1 S1 1
FNR C2 S1 1
FNR O2 S1 1
FNR N3 S1 1
FNR C4 S1 1
FNR O4 S1 1
FNR C4A S1 1
FNR N5 S1 1
FNR C5A S1 1
FNR C6 S1 1
FNR C7 S1 1
FNR C8 S1 1
FNR C9 S1 1
FNR C9A F1 1
FNR C5A F1 1
FNR C6 F1 1
FNR C7 F1 1
FNR C8 F1 1
FNR C9 F1 1
FNR "O5'" F2 1
FNR P F2 1
FNR O2P F2 1
FNR O1P F2 1
FNR O3P F2 1
FNR C4A F3 1
FNR CAA F3 1
FNR N1 F3 1
FNR C2 F3 1
FNR N3 F3 1
FNR C4 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id FNR
_pdbe_chem_comp_rdkit_properties.exactmw 458.120
_pdbe_chem_comp_rdkit_properties.amw 458.364
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 13
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 8
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.412
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 207.665
_pdbe_chem_comp_rdkit_properties.tpsa 208.440
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.765
_pdbe_chem_comp_rdkit_properties.CrippenMR 106.293
_pdbe_chem_comp_rdkit_properties.chi0v 15.305
_pdbe_chem_comp_rdkit_properties.chi1v 8.928
_pdbe_chem_comp_rdkit_properties.chi2v 3.624
_pdbe_chem_comp_rdkit_properties.chi3v 3.624
_pdbe_chem_comp_rdkit_properties.chi4v 2.301
_pdbe_chem_comp_rdkit_properties.chi0n 37.410
_pdbe_chem_comp_rdkit_properties.chi1n 18.350
_pdbe_chem_comp_rdkit_properties.chi2n 3.309
_pdbe_chem_comp_rdkit_properties.chi3n 3.309
_pdbe_chem_comp_rdkit_properties.chi4n 2.106
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.510
_pdbe_chem_comp_rdkit_properties.kappa1 7.525
_pdbe_chem_comp_rdkit_properties.kappa2 8.553
_pdbe_chem_comp_rdkit_properties.kappa3 5.047
_pdbe_chem_comp_rdkit_properties.Phi 2.076
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
FNR UniChem PDBe FNR
FNR UniChem ChEBI 16048
FNR UniChem HMDB HMDB0001142
FNR UniChem 'PubChem TPHARMA' 16418680
FNR UniChem NMRShiftDB 60022220
FNR UniChem Nikkaji J1.888.371F
FNR UniChem MetaboLights MTBLC16048
FNR UniChem PubChem 445395
FNR UniChem PubChem 136749967
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
FNR C9A -2.359 -0.191 0.025 ETKDGv3 1
FNR N10 -1.196 0.662 0.240 ETKDGv3 2
FNR CAA -1.377 2.105 0.354 ETKDGv3 3
FNR N1 -0.238 2.998 0.399 ETKDGv3 4
FNR C2 -0.405 4.410 0.550 ETKDGv3 5
FNR O2 0.600 5.167 0.596 ETKDGv3 6
FNR N3 -1.717 4.954 0.645 ETKDGv3 7
FNR C4 -2.838 4.074 0.574 ETKDGv3 8
FNR O4 -4.004 4.546 0.642 ETKDGv3 9
FNR C4A -2.626 2.616 0.423 ETKDGv3 10
FNR N5 -3.757 1.741 0.344 ETKDGv3 11
FNR C5A -3.594 0.343 0.093 ETKDGv3 12
FNR C6 -4.795 -0.499 -0.098 ETKDGv3 13
FNR C7 -4.684 -1.810 -0.359 ETKDGv3 14
FNR C7M -5.921 -2.648 -0.540 ETKDGv3 15
FNR C8 -3.328 -2.424 -0.432 ETKDGv3 16
FNR C8M -3.170 -3.891 -0.739 ETKDGv3 17
FNR C9 -2.239 -1.651 -0.266 ETKDGv3 18
FNR "C1'" 0.153 0.085 0.410 ETKDGv3 19
FNR "C2'" 0.950 0.121 -0.920 ETKDGv3 20
FNR "O2'" 0.590 -0.941 -1.768 ETKDGv3 21
FNR "C3'" 2.494 0.207 -0.724 ETKDGv3 22
FNR "O3'" 3.100 0.571 -1.940 ETKDGv3 23
FNR "C4'" 3.160 -1.075 -0.147 ETKDGv3 24
FNR "O4'" 2.592 -1.398 1.095 ETKDGv3 25
FNR "C5'" 4.678 -0.894 0.026 ETKDGv3 26
FNR "O5'" 4.933 0.138 0.952 ETKDGv3 27
FNR P 6.620 0.268 1.171 ETKDGv3 28
FNR O1P 7.392 0.548 -0.311 ETKDGv3 29
FNR O2P 7.161 -0.996 1.803 ETKDGv3 30
FNR O3P 6.936 1.574 2.199 ETKDGv3 31
FNR HN1 0.737 2.647 0.289 ETKDGv3 32
FNR H3 -1.857 5.984 0.756 ETKDGv3 33
FNR H5 -4.722 2.132 0.424 ETKDGv3 34
FNR H7 -5.772 -0.036 -0.027 ETKDGv3 35
FNR H7M1 -6.042 -3.324 0.332 ETKDGv3 36
FNR H7M2 -5.835 -3.256 -1.465 ETKDGv3 37
FNR H7M3 -6.836 -2.024 -0.631 ETKDGv3 38
FNR H8M1 -3.437 -4.077 -1.800 ETKDGv3 39
FNR H8M2 -3.834 -4.491 -0.084 ETKDGv3 40
FNR H8M3 -2.129 -4.241 -0.572 ETKDGv3 41
FNR H9 -1.271 -2.112 -0.357 ETKDGv3 42
FNR "H1'1" 0.691 0.644 1.205 ETKDGv3 43
FNR "H1'2" 0.101 -0.941 0.822 ETKDGv3 44
FNR H6 0.661 1.055 -1.450 ETKDGv3 45
FNR "H2'" 0.793 -1.789 -1.297 ETKDGv3 46
FNR H4 2.687 1.038 -0.011 ETKDGv3 47
FNR "H3'" 2.962 -0.176 -2.579 ETKDGv3 48
FNR H2 3.006 -1.914 -0.864 ETKDGv3 49
FNR "H4'" 2.786 -2.358 1.262 ETKDGv3 50
FNR "H5'1" 5.099 -1.860 0.387 ETKDGv3 51
FNR "H5'2" 5.128 -0.659 -0.964 ETKDGv3 52
FNR H1 7.582 -0.352 -0.679 ETKDGv3 53
FNR H3P 6.391 1.396 3.007 ETKDGv3 54
#