data_G1J
#
_chem_comp.id G1J
_chem_comp.name
"tert-butyl [(2R)-1-{[(2S)-1-oxo-3-phenyl-1-{[(pyridin-3-yl)methyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H35 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-05-02
_chem_comp.pdbx_modified_date 2019-03-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 505.672
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code G1J
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6DA5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G1J C12 C1 C 0 1 N N S N N N -21.763 -18.705 -4.896 1.572 0.468 0.258 C12 G1J 1
G1J C13 C2 C 0 1 N N N N N N -23.372 -18.679 -5.122 1.966 1.824 0.846 C13 G1J 2
G1J C14 C3 C 0 1 Y N N N N N -24.333 -19.861 -4.994 3.354 2.187 0.385 C14 G1J 3
G1J C15 C4 C 0 1 Y N N N N N -24.378 -20.786 -3.931 3.539 2.789 -0.845 C15 G1J 4
G1J C16 C5 C 0 1 Y N N N N N -25.342 -21.821 -3.905 4.812 3.122 -1.268 C16 G1J 5
G1J C17 C6 C 0 1 Y N N N N N -26.300 -21.949 -4.917 5.901 2.852 -0.460 C17 G1J 6
G1J C18 C7 C 0 1 Y N N N N N -26.271 -21.026 -5.949 5.716 2.249 0.771 C18 G1J 7
G1J C19 C8 C 0 1 Y N N N N N -25.319 -20.011 -5.964 4.442 1.922 1.196 C19 G1J 8
G1J C20 C9 C 0 1 N N N N N N -20.874 -19.942 -5.380 2.478 -0.602 0.811 C20 G1J 9
G1J C23 C10 C 0 1 N N N N N N -20.322 -22.001 -6.602 4.591 -1.814 0.832 C23 G1J 10
G1J C24 C11 C 0 1 Y N N N N N -19.700 -22.280 -7.972 5.901 -1.798 0.086 C24 G1J 11
G1J C25 C12 C 0 1 Y N N N N N -18.312 -22.441 -8.083 6.948 -1.012 0.528 C25 G1J 12
G1J C29 C13 C 0 1 Y N N N N N -20.408 -22.433 -9.138 6.072 -2.577 -1.048 C29 G1J 13
G1J C30 C14 C 0 1 N N N N N N -22.032 -18.374 -8.632 -3.379 2.118 -0.843 C30 G1J 14
G1J C32 C15 C 0 1 Y N N N N N -19.593 -17.931 -8.694 -5.454 2.601 0.472 C32 G1J 15
G1J C33 C16 C 0 1 Y N N N N N -18.397 -17.900 -9.314 -6.805 2.437 0.711 C33 G1J 16
G1J C34 C17 C 0 1 Y N N N N N -18.333 -18.267 -10.652 -7.553 1.601 -0.097 C34 G1J 17
G1J C35 C18 C 0 1 Y N N N N N -19.485 -18.667 -11.321 -6.950 0.930 -1.145 C35 G1J 18
G1J C01 C19 C 0 1 N N N N N N -27.631 -14.516 -9.833 -6.694 -1.941 -0.306 C01 G1J 19
G1J C02 C20 C 0 1 N N N N N N -26.589 -15.484 -10.427 -5.460 -2.798 -0.018 C02 G1J 20
G1J C03 C21 C 0 1 N N N N N N -27.157 -16.896 -10.570 -5.294 -2.961 1.495 C03 G1J 21
G1J C04 C22 C 0 1 N N N N N N -26.196 -14.926 -11.804 -5.632 -4.174 -0.664 C04 G1J 22
G1J C06 C23 C 0 1 N N N N N N -25.192 -16.341 -8.592 -3.987 -0.922 -0.100 C06 G1J 23
G1J C09 C24 C 0 1 N N R N N N -22.802 -17.095 -8.415 -2.586 1.071 -0.060 C09 G1J 24
G1J C10 C25 C 0 1 N N N N N N -22.761 -16.675 -6.898 -1.088 1.335 -0.228 C10 G1J 25
G1J C27 C26 C 0 1 Y N N N N N -18.380 -22.824 -10.353 8.293 -1.715 -1.205 C27 G1J 26
G1J C28 C27 C 0 1 Y N N N N N -19.792 -22.699 -10.339 7.294 -2.530 -1.702 C28 G1J 27
G1J C31 C28 C 0 1 Y N N N N N -20.776 -18.306 -9.336 -4.852 1.934 -0.579 C31 G1J 28
G1J C36 C29 C 0 1 Y N N N N N -20.688 -18.689 -10.671 -5.599 1.095 -1.384 C36 G1J 29
G1J N08 N1 N 0 1 N N N N N N -24.167 -17.322 -8.772 -2.907 -0.265 -0.567 N08 G1J 30
G1J N22 N2 N 0 1 N N N N N N -21.358 -20.958 -6.286 3.710 -0.775 0.294 N22 G1J 31
G1J N26 N3 N 0 1 Y N N N N N -17.652 -22.684 -9.223 8.097 -0.992 -0.119 N26 G1J 32
G1J O05 O1 O 0 1 N N N N N N -25.366 -15.478 -9.678 -4.282 -2.150 -0.566 O05 G1J 33
G1J O07 O2 O 0 1 N N N N N N -25.851 -16.227 -7.612 -4.694 -0.406 0.743 O07 G1J 34
G1J O21 O3 O 0 1 N N N N N N -19.736 -20.036 -5.087 2.097 -1.308 1.721 O21 G1J 35
G1J S11 S1 S 0 1 N N N N N N -21.283 -17.339 -5.997 -0.147 0.093 0.701 S11 G1J 36
G1J H1 H1 H 0 1 N N N N N N -21.513 -18.421 -3.863 1.668 0.500 -0.827 H1 G1J 37
G1J H2 H2 H 0 1 N N N N N N -23.509 -18.311 -6.149 1.261 2.584 0.510 H2 G1J 38
G1J H3 H3 H 0 1 N N N N N N -23.747 -17.929 -4.410 1.947 1.767 1.934 H3 G1J 39
G1J H4 H4 H 0 1 N N N N N N -23.665 -20.703 -3.124 2.688 3.000 -1.476 H4 G1J 40
G1J H5 H5 H 0 1 N N N N N N -25.339 -22.527 -3.087 4.957 3.592 -2.229 H5 G1J 41
G1J H6 H6 H 0 1 N N N N N N -27.036 -22.739 -4.894 6.896 3.112 -0.790 H6 G1J 42
G1J H7 H7 H 0 1 N N N N N N -26.993 -21.094 -6.749 6.567 2.038 1.402 H7 G1J 43
G1J H8 H8 H 0 1 N N N N N N -25.347 -19.299 -6.775 4.298 1.451 2.157 H8 G1J 44
G1J H9 H9 H 0 1 N N N N N N -20.774 -22.955 -6.293 4.117 -2.789 0.713 H9 G1J 45
G1J H10 H10 H 0 1 N N N N N N -19.472 -21.768 -5.944 4.773 -1.625 1.890 H10 G1J 46
G1J H11 H11 H 0 1 N N N N N N -17.728 -22.363 -7.178 6.824 -0.406 1.413 H11 G1J 47
G1J H12 H12 H 0 1 N N N N N N -21.484 -22.342 -9.112 5.273 -3.205 -1.414 H12 G1J 48
G1J H13 H13 H 0 1 N N N N N N -22.685 -19.055 -9.197 -3.075 3.116 -0.527 H13 G1J 49
G1J H14 H14 H 0 1 N N N N N N -21.826 -18.802 -7.640 -3.184 2.000 -1.909 H14 G1J 50
G1J H15 H15 H 0 1 N N N N N N -19.639 -17.653 -7.651 -4.869 3.254 1.103 H15 G1J 51
G1J H16 H16 H 0 1 N N N N N N -17.507 -17.596 -8.782 -7.277 2.961 1.529 H16 G1J 52
G1J H17 H17 H 0 1 N N N N N N -17.388 -18.242 -11.174 -8.609 1.472 0.090 H17 G1J 53
G1J H18 H18 H 0 1 N N N N N N -19.429 -18.962 -12.359 -7.534 0.275 -1.773 H18 G1J 54
G1J H19 H19 H 0 1 N N N N N N -27.944 -14.876 -8.842 -6.812 -1.825 -1.384 H19 G1J 55
G1J H20 H20 H 0 1 N N N N N N -27.187 -13.514 -9.736 -7.578 -2.428 0.105 H20 G1J 56
G1J H21 H21 H 0 1 N N N N N N -28.506 -14.466 -10.498 -6.571 -0.961 0.154 H21 G1J 57
G1J H22 H22 H 0 1 N N N N N N -27.434 -17.283 -9.578 -6.179 -3.448 1.906 H22 G1J 58
G1J H23 H23 H 0 1 N N N N N N -28.048 -16.869 -11.215 -4.415 -3.572 1.700 H23 G1J 59
G1J H24 H24 H 0 1 N N N N N N -26.398 -17.552 -11.021 -5.172 -1.981 1.955 H24 G1J 60
G1J H25 H25 H 0 1 N N N N N N -25.789 -13.911 -11.686 -5.749 -4.058 -1.741 H25 G1J 61
G1J H26 H26 H 0 1 N N N N N N -25.434 -15.576 -12.259 -4.752 -4.785 -0.458 H26 G1J 62
G1J H27 H27 H 0 1 N N N N N N -27.084 -14.892 -12.453 -6.516 -4.661 -0.252 H27 G1J 63
G1J H28 H28 H 0 1 N N N N N N -22.365 -16.288 -9.022 -2.849 1.132 0.997 H28 G1J 64
G1J H29 H29 H 0 1 N N N N N N -22.742 -15.577 -6.840 -0.825 1.274 -1.284 H29 G1J 65
G1J H30 H30 H 0 1 N N N N N N -23.669 -17.053 -6.406 -0.849 2.329 0.149 H30 G1J 66
G1J H31 H31 H 0 1 N N N N N N -17.876 -23.035 -11.285 9.248 -1.674 -1.708 H31 G1J 67
G1J H32 H32 H 0 1 N N N N N N -20.368 -22.809 -11.246 7.462 -3.120 -2.591 H32 G1J 68
G1J H33 H33 H 0 1 N N N N N N -21.576 -19.006 -11.197 -5.127 0.571 -2.202 H33 G1J 69
G1J H34 H34 H 0 1 N N N N N N -24.417 -18.207 -9.165 -2.342 -0.677 -1.239 H34 G1J 70
G1J H35 H35 H 0 1 N N N N N N -22.284 -20.967 -6.663 4.015 -0.210 -0.434 H35 G1J 71
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G1J C04 C02 SING N N 1
G1J C35 C36 DOUB Y N 2
G1J C35 C34 SING Y N 3
G1J C36 C31 SING Y N 4
G1J C34 C33 DOUB Y N 5
G1J C03 C02 SING N N 6
G1J C02 C01 SING N N 7
G1J C02 O05 SING N N 8
G1J C27 C28 DOUB Y N 9
G1J C27 N26 SING Y N 10
G1J C28 C29 SING Y N 11
G1J O05 C06 SING N N 12
G1J C31 C32 DOUB Y N 13
G1J C31 C30 SING N N 14
G1J C33 C32 SING Y N 15
G1J N26 C25 DOUB Y N 16
G1J C29 C24 DOUB Y N 17
G1J N08 C06 SING N N 18
G1J N08 C09 SING N N 19
G1J C30 C09 SING N N 20
G1J C06 O07 DOUB N N 21
G1J C09 C10 SING N N 22
G1J C25 C24 SING Y N 23
G1J C24 C23 SING N N 24
G1J C10 S11 SING N N 25
G1J C23 N22 SING N N 26
G1J N22 C20 SING N N 27
G1J S11 C12 SING N N 28
G1J C19 C18 DOUB Y N 29
G1J C19 C14 SING Y N 30
G1J C18 C17 SING Y N 31
G1J C20 O21 DOUB N N 32
G1J C20 C12 SING N N 33
G1J C13 C14 SING N N 34
G1J C13 C12 SING N N 35
G1J C14 C15 DOUB Y N 36
G1J C17 C16 DOUB Y N 37
G1J C15 C16 SING Y N 38
G1J C12 H1 SING N N 39
G1J C13 H2 SING N N 40
G1J C13 H3 SING N N 41
G1J C15 H4 SING N N 42
G1J C16 H5 SING N N 43
G1J C17 H6 SING N N 44
G1J C18 H7 SING N N 45
G1J C19 H8 SING N N 46
G1J C23 H9 SING N N 47
G1J C23 H10 SING N N 48
G1J C25 H11 SING N N 49
G1J C29 H12 SING N N 50
G1J C30 H13 SING N N 51
G1J C30 H14 SING N N 52
G1J C32 H15 SING N N 53
G1J C33 H16 SING N N 54
G1J C34 H17 SING N N 55
G1J C35 H18 SING N N 56
G1J C01 H19 SING N N 57
G1J C01 H20 SING N N 58
G1J C01 H21 SING N N 59
G1J C03 H22 SING N N 60
G1J C03 H23 SING N N 61
G1J C03 H24 SING N N 62
G1J C04 H25 SING N N 63
G1J C04 H26 SING N N 64
G1J C04 H27 SING N N 65
G1J C09 H28 SING N N 66
G1J C10 H29 SING N N 67
G1J C10 H30 SING N N 68
G1J C27 H31 SING N N 69
G1J C28 H32 SING N N 70
G1J C36 H33 SING N N 71
G1J N08 H34 SING N N 72
G1J N22 H35 SING N N 73
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G1J SMILES ACDLabs 12.01 C(Cc1ccccc1)(C(=O)NCc2cnccc2)SCC(Cc3ccccc3)NC(=O)OC(C)(C)C
G1J InChI InChI 1.03 InChI=1S/C29H35N3O3S/c1-29(2,3)35-28(34)32-25(17-22-11-6-4-7-12-22)21-36-26(18-23-13-8-5-9-14-23)27(33)31-20-24-15-10-16-30-19-24/h4-16,19,25-26H,17-18,20-21H2,1-3H3,(H,31,33)(H,32,34)/t25-,26+/m1/s1
G1J InChIKey InChI 1.03 DPUYQVBTNSUNNA-FTJBHMTQSA-N
G1J SMILES_CANONICAL CACTVS 3.385 CC(C)(C)OC(=O)N[C@@H](CS[C@@H](Cc1ccccc1)C(=O)NCc2cccnc2)Cc3ccccc3
G1J SMILES CACTVS 3.385 CC(C)(C)OC(=O)N[CH](CS[CH](Cc1ccccc1)C(=O)NCc2cccnc2)Cc3ccccc3
G1J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(C)(C)OC(=O)N[C@H](Cc1ccccc1)CS[C@@H](Cc2ccccc2)C(=O)NCc3cccnc3
G1J SMILES "OpenEye OEToolkits" 2.0.6 CC(C)(C)OC(=O)NC(Cc1ccccc1)CSC(Cc2ccccc2)C(=O)NCc3cccnc3
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G1J "SYSTEMATIC NAME" ACDLabs 12.01 "tert-butyl [(2R)-1-{[(2S)-1-oxo-3-phenyl-1-{[(pyridin-3-yl)methyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate"
G1J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{tert}-butyl ~{N}-[(2~{R})-1-[(2~{S})-1-oxidanylidene-3-phenyl-1-(pyridin-3-ylmethylamino)propan-2-yl]sulfanyl-3-phenyl-propan-2-yl]carbamate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G1J 'Create component' 2018-05-02 RCSB
G1J 'Initial release' 2019-04-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
G1J C12 C 9.495 -1.024 1
G1J C13 C 9.495 -2.525 2
G1J C14 C 10.794 -3.275 3
G1J C15 C 12.093 -2.525 4
G1J C16 C 13.392 -3.275 5
G1J C17 C 13.392 -4.774 6
G1J C18 C 12.093 -5.524 7
G1J C19 C 10.794 -4.774 8
G1J C20 C 10.794 -0.275 9
G1J C23 C 12.093 1.976 10
G1J C24 C 13.392 1.226 11
G1J C25 C 14.691 1.976 12
G1J C29 C 13.392 -0.275 13
G1J C30 C 4.299 -1.024 14
G1J C32 C 3.000 -3.275 15
G1J C33 C 3.000 -4.774 16
G1J C34 C 4.299 -5.524 17
G1J C35 C 5.598 -4.774 18
G1J C01 C 8.946 2.926 19
G1J C02 C 8.196 4.226 20
G1J C03 C 7.446 5.524 21
G1J C04 C 9.495 4.976 22
G1J C06 C 6.897 1.976 23
G1J C09 C 5.598 -0.275 24
G1J C10 C 6.897 -1.024 25
G1J C27 C 15.990 -0.275 26
G1J C28 C 14.691 -1.024 27
G1J C31 C 4.299 -2.525 28
G1J C36 C 5.598 -3.275 29
G1J N08 N 5.598 1.226 30
G1J N22 N 10.794 1.226 31
G1J N26 N 15.990 1.226 32
G1J O05 O 6.897 3.475 33
G1J O07 O 8.196 1.226 34
G1J O21 O 12.093 -1.024 35
G1J S11 S 8.196 -0.275 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
G1J C04 C02 SINGLE NONE 1
G1J C35 C36 DOUBLE NONE 2
G1J C35 C34 SINGLE NONE 3
G1J C36 C31 SINGLE NONE 4
G1J C34 C33 DOUBLE NONE 5
G1J C03 C02 SINGLE NONE 6
G1J C02 C01 SINGLE NONE 7
G1J C02 O05 SINGLE NONE 8
G1J C27 C28 DOUBLE NONE 9
G1J C27 N26 SINGLE NONE 10
G1J C28 C29 SINGLE NONE 11
G1J O05 C06 SINGLE NONE 12
G1J C31 C32 DOUBLE NONE 13
G1J C31 C30 SINGLE NONE 14
G1J C33 C32 SINGLE NONE 15
G1J N26 C25 DOUBLE NONE 16
G1J C29 C24 DOUBLE NONE 17
G1J N08 C06 SINGLE NONE 18
G1J N08 C09 SINGLE NONE 19
G1J C09 C30 SINGLE BEGINWEDGE 20
G1J C06 O07 DOUBLE NONE 21
G1J C09 C10 SINGLE NONE 22
G1J C25 C24 SINGLE NONE 23
G1J C24 C23 SINGLE NONE 24
G1J C10 S11 SINGLE NONE 25
G1J C23 N22 SINGLE NONE 26
G1J N22 C20 SINGLE NONE 27
G1J S11 C12 SINGLE NONE 28
G1J C19 C18 DOUBLE NONE 29
G1J C19 C14 SINGLE NONE 30
G1J C18 C17 SINGLE NONE 31
G1J C20 O21 DOUBLE NONE 32
G1J C20 C12 SINGLE NONE 33
G1J C13 C14 SINGLE NONE 34
G1J C12 C13 SINGLE BEGINDASH 35
G1J C14 C15 DOUBLE NONE 36
G1J C17 C16 DOUBLE NONE 37
G1J C15 C16 SINGLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
G1J MurckoScaffold S1 scaffold 'O=C(NCc1cccnc1)[C@H](Cc1ccccc1)SCCCc1ccccc1' InChI=1S/C24H26N2OS/c27-24(26-19-22-13-7-15-25-18-22)23(17-21-11-5-2-6-12-21)28-16-8-14-20-9-3-1-4-10-20/h1-7,9-13,15,18,23H,8,14,16-17,19H2,(H,26,27)/t23-/m0/s1 DIKBGLYYEMXQJR-QHCPKHFHSA-N
G1J amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
G1J phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
G1J pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
G1J C12 S1 1
G1J C13 S1 1
G1J C14 S1 1
G1J C15 S1 1
G1J C16 S1 1
G1J C17 S1 1
G1J C18 S1 1
G1J C19 S1 1
G1J C20 S1 1
G1J C23 S1 1
G1J C24 S1 1
G1J C25 S1 1
G1J C29 S1 1
G1J C30 S1 1
G1J C32 S1 1
G1J C33 S1 1
G1J C34 S1 1
G1J C35 S1 1
G1J C09 S1 1
G1J C10 S1 1
G1J C27 S1 1
G1J C28 S1 1
G1J C31 S1 1
G1J C36 S1 1
G1J N22 S1 1
G1J N26 S1 1
G1J O21 S1 1
G1J S11 S1 1
G1J N22 F1 1
G1J C20 F1 1
G1J O21 F1 1
G1J C12 F1 1
G1J C14 F2 1
G1J C19 F2 1
G1J C18 F2 1
G1J C17 F2 1
G1J C16 F2 1
G1J C15 F2 1
G1J C32 F2 2
G1J C31 F2 2
G1J C36 F2 2
G1J C35 F2 2
G1J C34 F2 2
G1J C33 F2 2
G1J C25 F3 1
G1J C24 F3 1
G1J C29 F3 1
G1J C28 F3 1
G1J C27 F3 1
G1J N26 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id G1J
_pdbe_chem_comp_rdkit_properties.exactmw 505.240
_pdbe_chem_comp_rdkit_properties.amw 505.684
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 71
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.345
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 267.094
_pdbe_chem_comp_rdkit_properties.tpsa 80.320
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.014
_pdbe_chem_comp_rdkit_properties.CrippenMR 144.981
_pdbe_chem_comp_rdkit_properties.chi0v 18.291
_pdbe_chem_comp_rdkit_properties.chi1v 9.883
_pdbe_chem_comp_rdkit_properties.chi2v 3.882
_pdbe_chem_comp_rdkit_properties.chi3v 3.882
_pdbe_chem_comp_rdkit_properties.chi4v 2.422
_pdbe_chem_comp_rdkit_properties.chi0n 52.475
_pdbe_chem_comp_rdkit_properties.chi1n 26.461
_pdbe_chem_comp_rdkit_properties.chi2n 3.106
_pdbe_chem_comp_rdkit_properties.chi3n 3.106
_pdbe_chem_comp_rdkit_properties.chi4n 1.841
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.320
_pdbe_chem_comp_rdkit_properties.kappa1 6.755
_pdbe_chem_comp_rdkit_properties.kappa2 13.685
_pdbe_chem_comp_rdkit_properties.kappa3 10.119
_pdbe_chem_comp_rdkit_properties.Phi 2.568
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
G1J UniChem PDBe G1J
G1J UniChem PubChem 137628293
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
G1J C12 1.079 -0.836 0.244 ETKDGv3 1
G1J C13 -0.189 -1.301 -0.501 ETKDGv3 2
G1J C14 0.142 -2.047 -1.769 ETKDGv3 3
G1J C15 0.574 -3.321 -1.721 ETKDGv3 4
G1J C16 0.911 -4.041 -2.967 ETKDGv3 5
G1J C17 0.789 -3.428 -4.150 ETKDGv3 6
G1J C18 0.318 -2.030 -4.212 ETKDGv3 7
G1J C19 0.012 -1.374 -3.086 ETKDGv3 8
G1J C20 1.878 0.208 -0.498 ETKDGv3 9
G1J C23 4.086 1.366 -0.904 ETKDGv3 10
G1J C24 5.509 1.316 -0.422 ETKDGv3 11
G1J C25 5.928 2.122 0.749 ETKDGv3 12
G1J C29 6.405 0.494 -0.993 ETKDGv3 13
G1J C30 -2.373 0.943 3.293 ETKDGv3 14
G1J C32 -1.936 -1.220 4.425 ETKDGv3 15
G1J C33 -1.182 -2.062 5.377 ETKDGv3 16
G1J C34 -0.193 -1.531 6.105 ETKDGv3 17
G1J C35 0.146 -0.101 5.959 ETKDGv3 18
G1J C01 -5.746 0.393 -2.254 ETKDGv3 19
G1J C02 -4.492 1.262 -2.467 ETKDGv3 20
G1J C03 -3.434 0.498 -3.287 ETKDGv3 21
G1J C04 -4.892 2.532 -3.233 ETKDGv3 22
G1J C06 -3.422 0.842 -0.213 ETKDGv3 23
G1J C09 -1.922 0.683 1.841 ETKDGv3 24
G1J C10 -0.456 1.103 1.590 ETKDGv3 25
G1J C27 8.124 1.186 0.578 ETKDGv3 26
G1J C28 7.784 0.431 -0.473 ETKDGv3 27
G1J C31 -1.635 0.085 4.288 ETKDGv3 28
G1J C36 -0.536 0.667 5.100 ETKDGv3 29
G1J N08 -2.797 1.433 0.933 ETKDGv3 30
G1J N22 3.276 0.358 -0.221 ETKDGv3 31
G1J N26 7.150 2.045 1.194 ETKDGv3 32
G1J O05 -3.945 1.681 -1.207 ETKDGv3 33
G1J O07 -3.496 -0.412 -0.319 ETKDGv3 34
G1J O21 1.318 0.972 -1.332 ETKDGv3 35
G1J S11 0.711 -0.268 1.954 ETKDGv3 36
G1J H1 1.734 -1.726 0.367 ETKDGv3 37
G1J H2 -0.837 -0.434 -0.744 ETKDGv3 38
G1J H3 -0.779 -1.969 0.163 ETKDGv3 39
G1J H4 0.682 -3.832 -0.772 ETKDGv3 40
G1J H5 1.257 -5.066 -2.919 ETKDGv3 41
G1J H6 1.036 -3.954 -5.063 ETKDGv3 42
G1J H7 0.221 -1.537 -5.171 ETKDGv3 43
G1J H8 -0.333 -0.350 -3.142 ETKDGv3 44
G1J H9 3.662 2.374 -0.708 ETKDGv3 45
G1J H10 4.047 1.190 -2.002 ETKDGv3 46
G1J H11 5.221 2.776 1.241 ETKDGv3 47
G1J H12 6.127 -0.132 -1.833 ETKDGv3 48
G1J H13 -3.462 0.730 3.377 ETKDGv3 49
G1J H14 -2.241 2.018 3.543 ETKDGv3 50
G1J H15 -2.725 -1.669 3.835 ETKDGv3 51
G1J H16 -1.431 -3.110 5.481 ETKDGv3 52
G1J H17 0.361 -2.148 6.801 ETKDGv3 53
G1J H18 0.950 0.324 6.547 ETKDGv3 54
G1J H19 -6.466 0.916 -1.589 ETKDGv3 55
G1J H20 -5.491 -0.583 -1.794 ETKDGv3 56
G1J H21 -6.247 0.185 -3.224 ETKDGv3 57
G1J H22 -3.169 -0.467 -2.809 ETKDGv3 58
G1J H23 -3.816 0.276 -4.307 ETKDGv3 59
G1J H24 -2.509 1.106 -3.380 ETKDGv3 60
G1J H25 -5.322 2.279 -4.227 ETKDGv3 61
G1J H26 -4.006 3.184 -3.388 ETKDGv3 62
G1J H27 -5.648 3.108 -2.657 ETKDGv3 63
G1J H28 -2.029 -0.405 1.641 ETKDGv3 64
G1J H29 -0.189 1.968 2.233 ETKDGv3 65
G1J H30 -0.330 1.453 0.547 ETKDGv3 66
G1J H31 9.132 1.148 0.971 ETKDGv3 67
G1J H32 8.512 -0.221 -0.938 ETKDGv3 68
G1J H33 -0.277 1.712 4.995 ETKDGv3 69
G1J H34 -2.843 2.472 1.033 ETKDGv3 70
G1J H35 3.716 -0.269 0.492 ETKDGv3 71
#