data_G2C
#
_chem_comp.id G2C
_chem_comp.name
"2'-deoxy-5'-O-[(S)-{[(R)-[dichloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H16 Cl2 N5 O12 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2009-09-11
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 574.098
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code G2C
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G2C N1 N1 N 0 1 N N N N N N 2.010 3.247 -0.130 -8.151 2.267 0.113 N1 G2C 1
G2C C2 C2 C 0 1 N N N N N N 2.303 1.917 -0.233 -7.720 1.616 1.230 C2 G2C 2
G2C N2 N2 N 0 1 N N N N N N 2.691 1.380 -1.455 -8.443 1.732 2.390 N2 G2C 3
G2C N3 N3 N 0 1 N N N N N N 2.215 1.098 0.851 -6.631 0.880 1.228 N3 G2C 4
G2C C4 C4 C 0 1 Y N N N N N 1.831 1.616 2.042 -5.894 0.738 0.120 C4 G2C 5
G2C C5 C5 C 0 1 Y N N N N N 1.513 2.964 2.174 -6.284 1.382 -1.060 C5 G2C 6
G2C C6 C6 C 0 1 N N N N N N 1.607 3.800 1.049 -7.458 2.171 -1.044 C6 G2C 7
G2C O6 O6 O 0 1 N N N N N N 1.331 5.018 1.116 -7.836 2.749 -2.049 O6 G2C 8
G2C N7 N7 N 0 1 Y N N N N N 1.156 3.208 3.441 -5.370 1.069 -2.010 N7 G2C 9
G2C C8 C8 C 0 1 Y N N N N N 1.264 2.019 4.064 -4.463 0.291 -1.496 C8 G2C 10
G2C N9 N9 N 0 1 Y N N N N N 1.682 1.032 3.242 -4.745 0.058 -0.181 N9 G2C 11
G2C PA PA P 0 1 N N N N N N 2.366 1.994 8.070 1.618 -2.002 -0.628 PA G2C 12
G2C PB PB P 0 1 N N N N N N -0.336 2.287 8.001 4.012 -0.255 -0.622 PB G2C 13
G2C PG PG P 0 1 N N N N N N -3.148 2.720 8.441 6.186 1.699 -0.058 PG G2C 14
G2C "C1'" "C1'" C 0 1 N N R N N N 1.916 -0.351 3.571 -3.960 -0.768 0.740 "C1'" G2C 15
G2C O1A O1A O 0 1 N N N N N N 2.790 3.138 7.237 1.451 -1.830 -2.089 O1A G2C 16
G2C O1B O1B O 0 1 N N N N N N -0.671 0.902 7.610 3.765 0.397 -1.927 O1B G2C 17
G2C CL1B CL1B CL 0 0 N N N N N N -1.439 2.112 10.635 3.405 2.286 0.771 CL1B G2C 18
G2C O1G O1G O 0 1 N N N N N N -4.141 3.415 9.345 6.733 2.791 0.992 O1G G2C 19
G2C "C2'" "C2'" C 0 1 N N N N N N 3.390 -0.782 3.377 -4.543 -2.194 0.790 "C2'" G2C 20
G2C O2A O2A O 0 1 N N N N N N 3.362 1.782 9.186 2.205 -3.470 -0.324 O2A G2C 21
G2C O2B O2B O 0 1 N N N N N N -0.277 3.168 6.772 5.108 -1.421 -0.804 O2B G2C 22
G2C CL2B CL2B CL 0 0 N N N N N N -1.227 4.626 9.355 4.933 0.186 2.157 CL2B G2C 23
G2C O2G O2G O 0 1 N N N N N N -3.498 1.250 8.390 7.281 0.534 -0.240 O2G G2C 24
G2C "C3'" "C3'" C 0 1 N N S N N N 3.711 -1.600 4.636 -3.366 -3.100 0.352 "C3'" G2C 25
G2C "O3'" "O3'" O 0 1 N N N N N N 3.458 -2.990 4.416 -3.313 -4.286 1.148 "O3'" G2C 26
G2C O3A O3A O 0 1 N N N N N N 1.014 2.296 8.700 2.640 -0.890 -0.070 O3A G2C 27
G2C C3B C3B C 0 1 N N N N N N -1.546 2.915 9.070 4.632 0.980 0.567 C3B G2C 28
G2C O3G O3G O 0 1 N N N N N N -3.245 3.297 7.084 5.938 2.352 -1.363 O3G G2C 29
G2C "C4'" "C4'" C 0 1 N N R N N N 2.727 -1.017 5.674 -2.139 -2.194 0.627 "C4'" G2C 30
G2C "O4'" "O4'" O 0 1 N N N N N N 1.549 -0.680 4.925 -2.607 -0.876 0.268 "O4'" G2C 31
G2C "C5'" "C5'" C 0 1 N N N N N N 3.260 0.218 6.455 -0.958 -2.605 -0.255 "C5'" G2C 32
G2C "O5'" "O5'" O 0 1 N N N N N N 2.290 0.724 7.233 0.191 -1.833 0.098 "O5'" G2C 33
G2C HN1 HN1 H 0 1 N N N N N N 2.093 3.829 -0.939 -8.961 2.799 0.147 HN1 G2C 34
G2C HN2 HN2 H 0 1 N N N N N N 2.901 0.405 -1.529 -9.250 2.271 2.407 HN2 G2C 35
G2C HN2A HN2A H 0 0 N N N N N N 2.760 1.969 -2.260 -8.149 1.275 3.193 HN2A G2C 36
G2C H8 H8 H 0 1 N N N N N N 1.040 1.870 5.110 -3.614 -0.111 -2.030 H8 G2C 37
G2C "H1'" "H1'" H 0 1 N N N N N N 1.272 -0.896 2.866 -3.974 -0.327 1.737 "H1'" G2C 38
G2C "H2'" "H2'" H 0 1 N N N N N N 3.513 -1.386 2.466 -4.858 -2.441 1.804 "H2'" G2C 39
G2C "H2'A" "H2'A" H 0 0 N N N N N N 4.053 0.091 3.288 -5.377 -2.290 0.096 "H2'A" G2C 40
G2C "H3'" "H3'" H 0 1 N N N N N N 4.764 -1.536 4.947 -3.439 -3.347 -0.707 "H3'" G2C 41
G2C "HO3'" "HO3'" H 0 0 N N N N N N 3.662 -3.478 5.205 -4.101 -4.842 1.079 "HO3'" G2C 42
G2C "H4'" "H4'" H 0 1 N N N N N N 2.545 -1.761 6.464 -1.863 -2.230 1.681 "H4'" G2C 43
G2C "H5'" "H5'" H 0 1 N N N N N N 4.108 -0.089 7.085 -0.745 -3.663 -0.107 "H5'" G2C 44
G2C "H5'A" "H5'A" H 0 0 N N N N N N 3.589 0.986 5.739 -1.207 -2.427 -1.301 "H5'A" G2C 45
G2C H13 H13 H 0 1 N N N N N N -4.615 4.073 8.850 7.559 3.215 0.724 H13 G2C 46
G2C H14 H14 H 0 1 N N N N N N 4.055 2.429 9.120 2.340 -3.653 0.615 H14 G2C 47
G2C H15 H15 H 0 1 N N N N N N -0.468 2.648 6.000 5.320 -1.892 0.013 H15 G2C 48
G2C H16 H16 H 0 1 N N N N N N -3.707 1.005 7.496 7.493 0.062 0.577 H16 G2C 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G2C N1 C2 SING N N 1
G2C N1 C6 SING N N 2
G2C N1 HN1 SING N N 3
G2C C2 N2 SING N N 4
G2C C2 N3 DOUB N N 5
G2C N2 HN2 SING N N 6
G2C N2 HN2A SING N N 7
G2C N3 C4 SING N N 8
G2C C4 C5 DOUB Y N 9
G2C C4 N9 SING Y N 10
G2C C5 C6 SING N N 11
G2C C5 N7 SING Y N 12
G2C C6 O6 DOUB N N 13
G2C N7 C8 DOUB Y N 14
G2C C8 N9 SING Y N 15
G2C C8 H8 SING N N 16
G2C N9 "C1'" SING N N 17
G2C PA O1A DOUB N N 18
G2C PA O2A SING N N 19
G2C PA O3A SING N N 20
G2C PA "O5'" SING N N 21
G2C PB O1B DOUB N N 22
G2C PB O2B SING N N 23
G2C PB O3A SING N N 24
G2C PB C3B SING N N 25
G2C PG O1G SING N N 26
G2C PG O2G SING N N 27
G2C PG C3B SING N N 28
G2C PG O3G DOUB N N 29
G2C "C1'" "C2'" SING N N 30
G2C "C1'" "O4'" SING N N 31
G2C "C1'" "H1'" SING N N 32
G2C CL1B C3B SING N N 33
G2C "C2'" "C3'" SING N N 34
G2C "C2'" "H2'" SING N N 35
G2C "C2'" "H2'A" SING N N 36
G2C CL2B C3B SING N N 37
G2C "C3'" "O3'" SING N N 38
G2C "C3'" "C4'" SING N N 39
G2C "C3'" "H3'" SING N N 40
G2C "O3'" "HO3'" SING N N 41
G2C "C4'" "O4'" SING N N 42
G2C "C4'" "C5'" SING N N 43
G2C "C4'" "H4'" SING N N 44
G2C "C5'" "O5'" SING N N 45
G2C "C5'" "H5'" SING N N 46
G2C "C5'" "H5'A" SING N N 47
G2C O1G H13 SING N N 48
G2C O2A H14 SING N N 49
G2C O2B H15 SING N N 50
G2C O2G H16 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G2C SMILES ACDLabs 11.02 O=P(O)(O)C(Cl)(Cl)P(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)CC3O
G2C SMILES_CANONICAL CACTVS 3.352 NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)C(Cl)(Cl)[P](O)(O)=O)O3
G2C SMILES CACTVS 3.352 NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)C(Cl)(Cl)[P](O)(O)=O)O3
G2C SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)CO[P@](=O)(O)O[P@@](=O)(C(P(=O)(O)O)(Cl)Cl)O)O)N=C(NC2=O)N
G2C SMILES "OpenEye OEToolkits" 1.7.0 c1nc2c(n1C3CC(C(O3)COP(=O)(O)OP(=O)(C(P(=O)(O)O)(Cl)Cl)O)O)N=C(NC2=O)N
G2C InChI InChI 1.03 InChI=1S/C11H16Cl2N5O12P3/c12-11(13,31(21,22)23)32(24,25)30-33(26,27)28-2-5-4(19)1-6(29-5)18-3-15-7-8(18)16-10(14)17-9(7)20/h3-6,19H,1-2H2,(H,24,25)(H,26,27)(H2,21,22,23)(H3,14,16,17,20)/t4-,5+,6+/m0/s1
G2C InChIKey InChI 1.03 FJDLJIOCZHPQHU-KVQBGUIXSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G2C "SYSTEMATIC NAME" ACDLabs 11.02 "2'-deoxy-5'-O-[(S)-{[(R)-[dichloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine"
G2C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[[[[(2R,3S,5R)-5-(2-azanyl-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]-dichloro-methyl]phosphonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G2C 'Create component' 2009-09-11 RCSB
G2C 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
G2C N1 N 5.104 -3.315 1
G2C C2 C 5.104 -1.815 2
G2C N2 N 3.805 -1.065 3
G2C N3 N 6.404 -1.065 4
G2C C4 C 7.702 -1.815 5
G2C C5 C 7.702 -3.315 6
G2C C6 C 6.404 -4.065 7
G2C O6 O 6.404 -5.565 8
G2C N7 N 9.122 -3.772 9
G2C C8 C 9.997 -2.565 10
G2C N9 N 9.122 -1.358 11
G2C PA P 14.817 3.175 12
G2C PB P 17.401 3.442 13
G2C PG P 20.140 2.218 14
G2C "C1'" C 9.588 0.068 15
G2C O1A O 15.697 1.960 16
G2C O1B O 18.014 4.812 17
G2C CL1B Cl 19.383 4.199 18
G2C O1G O 21.509 1.605 19
G2C "C2'" C 8.708 1.283 20
G2C O2A O 13.938 4.391 21
G2C O2B O 16.789 2.073 22
G2C CL2B Cl 18.158 1.461 23
G2C O2G O 20.753 3.587 24
G2C "C3'" C 9.592 2.495 25
G2C "O3'" O 9.131 3.922 26
G2C O3A O 16.032 4.055 27
G2C C3B C 18.771 2.830 28
G2C O3G O 19.528 0.848 29
G2C "C4'" C 11.018 2.029 30
G2C "O4'" O 11.015 0.529 31
G2C "C5'" C 12.233 2.908 32
G2C "O5'" O 13.602 2.296 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
G2C N1 C2 SINGLE NONE 1
G2C N1 C6 SINGLE NONE 2
G2C C2 N2 SINGLE NONE 3
G2C C2 N3 DOUBLE NONE 4
G2C N3 C4 SINGLE NONE 5
G2C C4 C5 DOUBLE NONE 6
G2C C4 N9 SINGLE NONE 7
G2C C5 C6 SINGLE NONE 8
G2C C5 N7 SINGLE NONE 9
G2C C6 O6 DOUBLE NONE 10
G2C N7 C8 DOUBLE NONE 11
G2C C8 N9 SINGLE NONE 12
G2C "C1'" N9 SINGLE BEGINWEDGE 13
G2C PA O1A DOUBLE NONE 14
G2C PA O2A SINGLE BEGINWEDGE 15
G2C PA O3A SINGLE NONE 16
G2C PA "O5'" SINGLE NONE 17
G2C PB O1B DOUBLE NONE 18
G2C PB O2B SINGLE BEGINDASH 19
G2C PB O3A SINGLE NONE 20
G2C PB C3B SINGLE NONE 21
G2C PG O1G SINGLE NONE 22
G2C PG O2G SINGLE NONE 23
G2C PG C3B SINGLE NONE 24
G2C PG O3G DOUBLE NONE 25
G2C "C1'" "C2'" SINGLE NONE 26
G2C "C1'" "O4'" SINGLE NONE 27
G2C CL1B C3B SINGLE NONE 28
G2C "C2'" "C3'" SINGLE NONE 29
G2C CL2B C3B SINGLE NONE 30
G2C "C3'" "O3'" SINGLE BEGINDASH 31
G2C "C3'" "C4'" SINGLE NONE 32
G2C "C4'" "O4'" SINGLE NONE 33
G2C "C4'" "C5'" SINGLE BEGINWEDGE 34
G2C "C5'" "O5'" SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
G2C MurckoScaffold S1 scaffold 'O=c1[nH]cnc2c1ncn2[C@H]1CCCO1' InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1 JBXHFRZBULGPSC-ZCFIWIBFSA-N
G2C deoxyribose F1 fragment 'OCC1OC[CH2]C1O' InChI=1S/C5H10O3/c6-3-5-4(7)1-2-8-5/h4-7H,1-3H2 NSMOSDAEGJTOIQ-UHFFFAOYSA-N
G2C imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
G2C phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
G2C purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
G2C pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
G2C N1 S1 1
G2C C2 S1 1
G2C N3 S1 1
G2C C4 S1 1
G2C C5 S1 1
G2C C6 S1 1
G2C O6 S1 1
G2C N7 S1 1
G2C C8 S1 1
G2C N9 S1 1
G2C "C1'" S1 1
G2C "C2'" S1 1
G2C "C3'" S1 1
G2C "C4'" S1 1
G2C "O4'" S1 1
G2C "C1'" F1 1
G2C "C2'" F1 1
G2C "C3'" F1 1
G2C "O3'" F1 1
G2C "C4'" F1 1
G2C "O4'" F1 1
G2C "C5'" F1 1
G2C "O5'" F1 1
G2C C4 F2 1
G2C C5 F2 1
G2C N7 F2 1
G2C C8 F2 1
G2C N9 F2 1
G2C O2A F3 1
G2C PA F3 1
G2C O1A F3 1
G2C O3A F3 1
G2C "O5'" F3 1
G2C N7 F4 1
G2C C8 F4 1
G2C N9 F4 1
G2C C4 F4 1
G2C C5 F4 1
G2C C6 F4 1
G2C N1 F4 1
G2C C2 F4 1
G2C N3 F4 1
G2C C5 F5 1
G2C C4 F5 1
G2C N3 F5 1
G2C C2 F5 1
G2C N1 F5 1
G2C C6 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id G2C
_pdbe_chem_comp_rdkit_properties.exactmw 572.939
_pdbe_chem_comp_rdkit_properties.amw 574.100
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 16
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 22
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.545
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 215.357
_pdbe_chem_comp_rdkit_properties.tpsa 269.640
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.027
_pdbe_chem_comp_rdkit_properties.CrippenMR 107.342
_pdbe_chem_comp_rdkit_properties.chi0v 18.928
_pdbe_chem_comp_rdkit_properties.chi1v 12.709
_pdbe_chem_comp_rdkit_properties.chi2v 10.487
_pdbe_chem_comp_rdkit_properties.chi3v 10.487
_pdbe_chem_comp_rdkit_properties.chi4v 5.749
_pdbe_chem_comp_rdkit_properties.chi0n 30.733
_pdbe_chem_comp_rdkit_properties.chi1n 14.790
_pdbe_chem_comp_rdkit_properties.chi2n 3.241
_pdbe_chem_comp_rdkit_properties.chi3n 3.241
_pdbe_chem_comp_rdkit_properties.chi4n 1.891
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.900
_pdbe_chem_comp_rdkit_properties.kappa1 12.369
_pdbe_chem_comp_rdkit_properties.kappa2 8.953
_pdbe_chem_comp_rdkit_properties.kappa3 5.359
_pdbe_chem_comp_rdkit_properties.Phi 3.356
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
G2C UniChem PDBe G2C
G2C UniChem ZINC ZINC000058639165
G2C UniChem PubChem 135566489
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
G2C N1 -3.892 -2.674 -5.076 ETKDGv3 1
G2C C2 -3.421 -1.309 -5.167 ETKDGv3 2
G2C N2 -3.902 -0.457 -6.205 ETKDGv3 3
G2C N3 -2.561 -0.847 -4.296 ETKDGv3 4
G2C C4 -2.064 -1.695 -3.250 ETKDGv3 5
G2C C5 -2.451 -2.933 -3.092 ETKDGv3 6
G2C C6 -3.421 -3.514 -4.012 ETKDGv3 7
G2C O6 -3.836 -4.696 -3.878 ETKDGv3 8
G2C N7 -1.944 -3.472 -1.877 ETKDGv3 9
G2C C8 -1.250 -2.499 -1.363 ETKDGv3 10
G2C N9 -1.235 -1.310 -2.168 ETKDGv3 11
G2C PA 1.230 -0.167 3.916 ETKDGv3 12
G2C PB 3.252 1.681 3.688 ETKDGv3 13
G2C PG 4.812 1.573 1.135 ETKDGv3 14
G2C "C1'" -0.993 0.055 -1.705 ETKDGv3 15
G2C O1A 0.924 -1.645 4.018 ETKDGv3 16
G2C O1B 3.339 2.047 5.154 ETKDGv3 17
G2C CL1B 5.325 3.691 3.109 ETKDGv3 18
G2C O1G 4.388 -0.053 0.934 ETKDGv3 19
G2C "C2'" -2.187 0.578 -0.912 ETKDGv3 20
G2C O2A 0.877 0.557 5.405 ETKDGv3 21
G2C O2B 2.082 2.648 2.934 ETKDGv3 22
G2C CL2B 6.100 0.963 3.704 ETKDGv3 23
G2C O2G 3.683 2.563 0.351 ETKDGv3 24
G2C "C3'" -1.709 0.514 0.510 ETKDGv3 25
G2C "O3'" -2.220 1.575 1.274 ETKDGv3 26
G2C O3A 2.878 0.026 3.538 ETKDGv3 27
G2C C3B 4.873 1.980 2.910 ETKDGv3 28
G2C O3G 6.175 1.807 0.524 ETKDGv3 29
G2C "C4'" -0.199 0.635 0.350 ETKDGv3 30
G2C "O4'" 0.162 0.077 -0.892 ETKDGv3 31
G2C "C5'" 0.563 -0.072 1.474 ETKDGv3 32
G2C "O5'" 0.252 0.535 2.707 ETKDGv3 33
G2C HN1 -4.582 -3.042 -5.768 ETKDGv3 34
G2C HN2 -4.591 -0.812 -6.904 ETKDGv3 35
G2C HN2A -3.571 0.531 -6.276 ETKDGv3 36
G2C H8 -0.754 -2.578 -0.405 ETKDGv3 37
G2C "H1'" -0.818 0.707 -2.588 ETKDGv3 38
G2C "H2'" -3.107 -0.029 -1.058 ETKDGv3 39
G2C "H2'A" -2.395 1.632 -1.205 ETKDGv3 40
G2C "H3'" -1.985 -0.470 0.959 ETKDGv3 41
G2C "HO3'" -3.168 1.352 1.465 ETKDGv3 42
G2C "H4'" 0.094 1.710 0.343 ETKDGv3 43
G2C "H5'" 1.649 0.019 1.248 ETKDGv3 44
G2C "H5'A" 0.284 -1.150 1.484 ETKDGv3 45
G2C H13 4.272 -0.166 -0.043 ETKDGv3 46
G2C H14 -0.109 0.506 5.484 ETKDGv3 47
G2C H15 2.314 3.577 3.186 ETKDGv3 48
G2C H16 2.837 2.050 0.366 ETKDGv3 49
#