data_G6Y
#
_chem_comp.id G6Y
_chem_comp.name
"3'-[(2R)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl]-5'-methoxy[1,1'-biphenyl]-4-carboxylic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H24 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-05-11
_chem_comp.pdbx_modified_date 2018-05-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 416.472
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code G6Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6DDP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G6Y C4 C1 C 0 1 Y N N N N N -0.584 1.582 6.018 -5.440 -1.069 0.215 C4 G6Y 1
G6Y C5 C2 C 0 1 Y N N N N N -1.052 1.555 4.707 -4.301 -0.367 -0.179 C5 G6Y 2
G6Y C6 C3 C 0 1 Y N N N N N -0.118 1.341 3.697 -4.342 0.338 -1.399 C6 G6Y 3
G6Y N1 N1 N 0 1 Y N N N N N 1.180 1.177 3.981 -5.456 0.307 -2.120 N1 G6Y 4
G6Y N3 N2 N 0 1 Y N N N N N 0.722 1.407 6.253 -6.510 -1.048 -0.563 N3 G6Y 5
G6Y CBE C4 C 0 1 N N N N N N -1.168 3.145 7.769 -4.969 -3.274 1.247 CBE G6Y 6
G6Y CBD C5 C 0 1 N N N N N N -1.436 1.783 7.124 -5.450 -1.845 1.507 CBD G6Y 7
G6Y C2 C6 C 0 1 Y N N N N N 1.601 1.233 5.253 -6.513 -0.374 -1.704 C2 G6Y 8
G6Y NAG N3 N 0 1 N N N N N N 2.895 1.081 5.509 -7.655 -0.382 -2.484 NAG G6Y 9
G6Y NAH N4 N 0 1 N N N N N N -0.551 1.302 2.430 -3.240 1.051 -1.837 NAH G6Y 10
G6Y CAI C7 C 0 1 N N N N N N -2.449 1.735 4.461 -3.122 -0.363 0.634 CAI G6Y 11
G6Y CAJ C8 C 0 1 N N N N N N -3.605 1.889 4.374 -2.155 -0.359 1.300 CAJ G6Y 12
G6Y CAK C9 C 0 1 N N R N N N -5.063 2.122 4.394 -0.944 -0.355 2.136 CAK G6Y 13
G6Y CBC C10 C 0 1 N N N N N N -5.476 2.931 3.146 -1.272 0.239 3.507 CBC G6Y 14
G6Y CAL C11 C 0 1 Y N N N N N -5.398 2.864 5.565 0.122 0.477 1.470 CAL G6Y 15
G6Y CAM C12 C 0 1 Y N N N N N -4.806 4.107 5.858 1.327 -0.098 1.123 CAM G6Y 16
G6Y CAQ C13 C 0 1 Y N N N N N -6.340 2.350 6.458 -0.112 1.814 1.205 CAQ G6Y 17
G6Y CAP C14 C 0 1 Y N N N N N -6.684 3.058 7.604 0.865 2.586 0.591 CAP G6Y 18
G6Y OAX O1 O 0 1 N N N N N N -7.611 2.525 8.460 0.629 3.899 0.332 OAX G6Y 19
G6Y CAY C15 C 0 1 N N N N N N -7.672 3.216 9.711 1.679 4.633 -0.301 CAY G6Y 20
G6Y CAO C16 C 0 1 Y N N N N N -6.086 4.290 7.877 2.080 2.018 0.244 CAO G6Y 21
G6Y CAN C17 C 0 1 Y N N N N N -5.129 4.825 7.026 2.315 0.670 0.507 CAN G6Y 22
G6Y CAR C18 C 0 1 Y N N N N N -4.551 6.083 7.292 3.611 0.055 0.132 CAR G6Y 23
G6Y CAS C19 C 0 1 Y N N N N N -3.337 6.444 6.713 3.841 -1.297 0.391 CAS G6Y 24
G6Y CAT C20 C 0 1 Y N N N N N -2.763 7.698 6.931 5.043 -1.870 0.043 CAT G6Y 25
G6Y CAU C21 C 0 1 Y N N N N N -3.396 8.627 7.749 6.034 -1.097 -0.569 CAU G6Y 26
G6Y CAZ C22 C 0 1 N N N N N N -2.816 9.882 7.958 7.323 -1.710 -0.942 CAZ G6Y 27
G6Y OBB O2 O 0 1 N N N N N N -1.978 10.327 7.138 7.524 -2.887 -0.718 OBB G6Y 28
G6Y OBA O3 O 0 1 N N N N N N -3.152 10.593 8.941 8.278 -0.964 -1.533 OBA G6Y 29
G6Y CAV C23 C 0 1 Y N N N N N -4.608 8.275 8.336 5.802 0.257 -0.827 CAV G6Y 30
G6Y CAW C24 C 0 1 Y N N N N N -5.190 7.024 8.106 4.596 0.826 -0.484 CAW G6Y 31
G6Y H1 H1 H 0 1 N N N N N N -1.841 3.283 8.628 -5.632 -3.756 0.528 H1 G6Y 32
G6Y H2 H2 H 0 1 N N N N N N -0.123 3.190 8.111 -3.955 -3.249 0.846 H2 G6Y 33
G6Y H3 H3 H 0 1 N N N N N N -1.347 3.941 7.032 -4.976 -3.836 2.181 H3 G6Y 34
G6Y H4 H4 H 0 1 N N N N N N -2.482 1.742 6.787 -4.787 -1.364 2.225 H4 G6Y 35
G6Y H5 H5 H 0 1 N N N N N N -1.259 0.990 7.866 -6.463 -1.871 1.908 H5 G6Y 36
G6Y H6 H6 H 0 1 N N N N N N 3.390 0.938 4.652 -7.674 0.106 -3.322 H6 G6Y 37
G6Y H7 H7 H 0 1 N N N N N N 3.244 1.901 5.963 -8.438 -0.876 -2.194 H7 G6Y 38
G6Y H8 H8 H 0 1 N N N N N N 0.223 1.142 1.817 -3.278 1.534 -2.677 H8 G6Y 39
G6Y H9 H9 H 0 1 N N N N N N -1.216 0.562 2.328 -2.430 1.068 -1.303 H9 G6Y 40
G6Y H10 H10 H 0 1 N N N N N N -5.593 1.158 4.384 -0.583 -1.376 2.259 H10 G6Y 41
G6Y H11 H11 H 0 1 N N N N N N -6.562 3.103 3.163 -1.632 1.260 3.384 H11 G6Y 42
G6Y H12 H12 H 0 1 N N N N N N -4.951 3.898 3.146 -2.043 -0.363 3.988 H12 G6Y 43
G6Y H13 H13 H 0 1 N N N N N N -5.208 2.368 2.239 -0.375 0.242 4.126 H13 G6Y 44
G6Y H14 H14 H 0 1 N N N N N N -4.085 4.521 5.169 1.506 -1.143 1.329 H14 G6Y 45
G6Y H15 H15 H 0 1 N N N N N N -6.805 1.396 6.257 -1.059 2.258 1.475 H15 G6Y 46
G6Y H16 H16 H 0 1 N N N N N N -8.430 2.745 10.354 2.568 4.614 0.330 H16 G6Y 47
G6Y H17 H17 H 0 1 N N N N N N -6.691 3.167 10.205 1.909 4.181 -1.266 H17 G6Y 48
G6Y H18 H18 H 0 1 N N N N N N -7.942 4.268 9.536 1.362 5.665 -0.451 H18 G6Y 49
G6Y H19 H19 H 0 1 N N N N N N -6.373 4.835 8.764 2.841 2.618 -0.233 H19 G6Y 50
G6Y H20 H20 H 0 1 N N N N N N -2.826 5.735 6.078 3.075 -1.894 0.864 H20 G6Y 51
G6Y H21 H21 H 0 1 N N N N N N -1.823 7.948 6.462 5.221 -2.916 0.244 H21 G6Y 52
G6Y H22 H22 H 0 1 N N N N N N -2.685 11.419 8.909 9.106 -1.410 -1.759 H22 G6Y 53
G6Y H23 H23 H 0 1 N N N N N N -5.109 8.981 8.982 6.566 0.855 -1.300 H23 G6Y 54
G6Y H24 H24 H 0 1 N N N N N N -6.140 6.783 8.560 4.415 1.871 -0.688 H24 G6Y 55
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G6Y NAH C6 SING N N 1
G6Y CBC CAK SING N N 2
G6Y C6 N1 DOUB Y N 3
G6Y C6 C5 SING Y N 4
G6Y N1 C2 SING Y N 5
G6Y CAJ CAK SING N N 6
G6Y CAJ CAI TRIP N N 7
G6Y CAK CAL SING N N 8
G6Y CAI C5 SING N N 9
G6Y C5 C4 DOUB Y N 10
G6Y C2 NAG SING N N 11
G6Y C2 N3 DOUB Y N 12
G6Y CAL CAM DOUB Y N 13
G6Y CAL CAQ SING Y N 14
G6Y CAM CAN SING Y N 15
G6Y C4 N3 SING Y N 16
G6Y C4 CBD SING N N 17
G6Y CAQ CAP DOUB Y N 18
G6Y CAS CAT DOUB Y N 19
G6Y CAS CAR SING Y N 20
G6Y CAT CAU SING Y N 21
G6Y CAN CAR SING N N 22
G6Y CAN CAO DOUB Y N 23
G6Y CBD CBE SING N N 24
G6Y OBB CAZ DOUB N N 25
G6Y CAR CAW DOUB Y N 26
G6Y CAP CAO SING Y N 27
G6Y CAP OAX SING N N 28
G6Y CAU CAZ SING N N 29
G6Y CAU CAV DOUB Y N 30
G6Y CAZ OBA SING N N 31
G6Y CAW CAV SING Y N 32
G6Y OAX CAY SING N N 33
G6Y CBE H1 SING N N 34
G6Y CBE H2 SING N N 35
G6Y CBE H3 SING N N 36
G6Y CBD H4 SING N N 37
G6Y CBD H5 SING N N 38
G6Y NAG H6 SING N N 39
G6Y NAG H7 SING N N 40
G6Y NAH H8 SING N N 41
G6Y NAH H9 SING N N 42
G6Y CAK H10 SING N N 43
G6Y CBC H11 SING N N 44
G6Y CBC H12 SING N N 45
G6Y CBC H13 SING N N 46
G6Y CAM H14 SING N N 47
G6Y CAQ H15 SING N N 48
G6Y CAY H16 SING N N 49
G6Y CAY H17 SING N N 50
G6Y CAY H18 SING N N 51
G6Y CAO H19 SING N N 52
G6Y CAS H20 SING N N 53
G6Y CAT H21 SING N N 54
G6Y OBA H22 SING N N 55
G6Y CAV H23 SING N N 56
G6Y CAW H24 SING N N 57
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G6Y SMILES ACDLabs 12.01 "c1(nc(nc(c1C#CC(c2cc(cc(c2)OC)c3ccc(cc3)C(O)=O)C)N)N)CC"
G6Y InChI InChI 1.03 InChI=1S/C24H24N4O3/c1-4-21-20(22(25)28-24(26)27-21)10-5-14(2)17-11-18(13-19(12-17)31-3)15-6-8-16(9-7-15)23(29)30/h6-9,11-14H,4H2,1-3H3,(H,29,30)(H4,25,26,27,28)/t14-/m0/s1
G6Y InChIKey InChI 1.03 OKJCHFXBCVXSIZ-AWEZNQCLSA-N
G6Y SMILES_CANONICAL CACTVS 3.385 "CCc1nc(N)nc(N)c1C#C[C@H](C)c2cc(OC)cc(c2)c3ccc(cc3)C(O)=O"
G6Y SMILES CACTVS 3.385 "CCc1nc(N)nc(N)c1C#C[CH](C)c2cc(OC)cc(c2)c3ccc(cc3)C(O)=O"
G6Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCc1c(c(nc(n1)N)N)C#C[C@H](C)c2cc(cc(c2)OC)c3ccc(cc3)C(=O)O"
G6Y SMILES "OpenEye OEToolkits" 2.0.6 "CCc1c(c(nc(n1)N)N)C#CC(C)c2cc(cc(c2)OC)c3ccc(cc3)C(=O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G6Y "SYSTEMATIC NAME" ACDLabs 12.01 "3'-[(2R)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl]-5'-methoxy[1,1'-biphenyl]-4-carboxylic acid"
G6Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[3-[(2~{R})-4-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]but-3-yn-2-yl]-5-methoxy-phenyl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G6Y 'Create component' 2018-05-11 RCSB
G6Y 'Initial release' 2018-05-23 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
G6Y C4 C 15.990 -3.143 1
G6Y C5 C 14.691 -3.893 2
G6Y C6 C 14.691 -5.393 3
G6Y N1 N 15.990 -6.143 4
G6Y N3 N 17.290 -3.893 5
G6Y CBE C 17.290 -0.892 6
G6Y CBD C 15.990 -1.643 7
G6Y C2 C 17.290 -5.393 8
G6Y NAG N 18.588 -6.143 9
G6Y NAH N 13.392 -6.143 10
G6Y CAI C 13.392 -3.143 11
G6Y CAJ C 12.093 -2.393 12
G6Y CAK C 10.794 -1.643 13
G6Y CBC C 9.495 -2.393 14
G6Y CAL C 10.794 -0.142 15
G6Y CAM C 9.495 0.608 16
G6Y CAQ C 12.093 0.608 17
G6Y CAP C 12.093 2.107 18
G6Y OAX O 13.392 2.857 19
G6Y CAY C 13.392 4.357 20
G6Y CAO C 10.794 2.857 21
G6Y CAN C 9.495 2.107 22
G6Y CAR C 8.196 2.857 23
G6Y CAS C 6.897 2.107 24
G6Y CAT C 5.598 2.857 25
G6Y CAU C 5.598 4.357 26
G6Y CAZ C 4.299 5.107 27
G6Y OBB O 4.299 6.607 28
G6Y OBA O 3.000 4.357 29
G6Y CAV C 6.897 5.107 30
G6Y CAW C 8.196 4.357 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
G6Y NAH C6 SINGLE NONE 1
G6Y CAK CBC SINGLE BEGINDASH 2
G6Y C6 N1 DOUBLE NONE 3
G6Y C6 C5 SINGLE NONE 4
G6Y N1 C2 SINGLE NONE 5
G6Y CAJ CAK SINGLE NONE 6
G6Y CAJ CAI TRIPLE NONE 7
G6Y CAK CAL SINGLE NONE 8
G6Y CAI C5 SINGLE NONE 9
G6Y C5 C4 DOUBLE NONE 10
G6Y C2 NAG SINGLE NONE 11
G6Y C2 N3 DOUBLE NONE 12
G6Y CAL CAM DOUBLE NONE 13
G6Y CAL CAQ SINGLE NONE 14
G6Y CAM CAN SINGLE NONE 15
G6Y C4 N3 SINGLE NONE 16
G6Y C4 CBD SINGLE NONE 17
G6Y CAQ CAP DOUBLE NONE 18
G6Y CAS CAT DOUBLE NONE 19
G6Y CAS CAR SINGLE NONE 20
G6Y CAT CAU SINGLE NONE 21
G6Y CAN CAR SINGLE NONE 22
G6Y CAN CAO DOUBLE NONE 23
G6Y CBD CBE SINGLE NONE 24
G6Y OBB CAZ DOUBLE NONE 25
G6Y CAR CAW DOUBLE NONE 26
G6Y CAP CAO SINGLE NONE 27
G6Y CAP OAX SINGLE NONE 28
G6Y CAU CAZ SINGLE NONE 29
G6Y CAU CAV DOUBLE NONE 30
G6Y CAZ OBA SINGLE NONE 31
G6Y CAW CAV SINGLE NONE 32
G6Y OAX CAY SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
G6Y MurckoScaffold S1 scaffold 'C(#Cc1cncnc1)Cc1cccc(-c2ccccc2)c1' InChI=1S/C19H14N2/c1-2-9-18(10-3-1)19-11-5-7-16(12-19)6-4-8-17-13-20-15-21-14-17/h1-3,5,7,9-15H,6H2 VKHWQAXLRZDYTI-UHFFFAOYSA-N
G6Y phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
G6Y pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
G6Y C4 S1 1
G6Y C5 S1 1
G6Y C6 S1 1
G6Y N1 S1 1
G6Y N3 S1 1
G6Y C2 S1 1
G6Y CAI S1 1
G6Y CAJ S1 1
G6Y CAK S1 1
G6Y CAL S1 1
G6Y CAM S1 1
G6Y CAQ S1 1
G6Y CAP S1 1
G6Y CAO S1 1
G6Y CAN S1 1
G6Y CAR S1 1
G6Y CAS S1 1
G6Y CAT S1 1
G6Y CAU S1 1
G6Y CAV S1 1
G6Y CAW S1 1
G6Y CAL F1 1
G6Y CAM F1 1
G6Y CAN F1 1
G6Y CAO F1 1
G6Y CAP F1 1
G6Y CAQ F1 1
G6Y CAR F1 2
G6Y CAS F1 2
G6Y CAT F1 2
G6Y CAU F1 2
G6Y CAV F1 2
G6Y CAW F1 2
G6Y C5 F2 1
G6Y C6 F2 1
G6Y N1 F2 1
G6Y C2 F2 1
G6Y N3 F2 1
G6Y C4 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id G6Y
_pdbe_chem_comp_rdkit_properties.exactmw 416.185
_pdbe_chem_comp_rdkit_properties.amw 416.481
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 55
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.208
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 214.691
_pdbe_chem_comp_rdkit_properties.tpsa 124.350
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.910
_pdbe_chem_comp_rdkit_properties.CrippenMR 116.273
_pdbe_chem_comp_rdkit_properties.chi0v 15.014
_pdbe_chem_comp_rdkit_properties.chi1v 7.908
_pdbe_chem_comp_rdkit_properties.chi2v 3.467
_pdbe_chem_comp_rdkit_properties.chi3v 3.467
_pdbe_chem_comp_rdkit_properties.chi4v 2.117
_pdbe_chem_comp_rdkit_properties.chi0n 39.014
_pdbe_chem_comp_rdkit_properties.chi1n 19.605
_pdbe_chem_comp_rdkit_properties.chi2n 3.467
_pdbe_chem_comp_rdkit_properties.chi3n 3.467
_pdbe_chem_comp_rdkit_properties.chi4n 2.117
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.050
_pdbe_chem_comp_rdkit_properties.kappa1 6.473
_pdbe_chem_comp_rdkit_properties.kappa2 9.179
_pdbe_chem_comp_rdkit_properties.kappa3 4.930
_pdbe_chem_comp_rdkit_properties.Phi 1.917
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
G6Y UniChem ChEMBL CHEMBL3828485
G6Y UniChem PDBe G6Y
G6Y UniChem ZINC ZINC000653838797
G6Y UniChem PubChem 124081251
G6Y UniChem BindingDb 210930
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loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
G6Y C4 -4.154 -1.642 1.798 ETKDGv3 1
G6Y C5 -3.137 -0.848 1.392 ETKDGv3 2
G6Y C6 -2.679 0.233 2.304 ETKDGv3 3
G6Y N1 -3.253 0.381 3.462 ETKDGv3 4
G6Y N3 -4.738 -1.427 3.094 ETKDGv3 5
G6Y CBE -3.817 -4.036 1.160 ETKDGv3 6
G6Y CBD -4.675 -2.789 0.967 ETKDGv3 7
G6Y C2 -4.322 -0.479 3.880 ETKDGv3 8
G6Y NAG -4.927 -0.294 5.158 ETKDGv3 9
G6Y NAH -1.615 1.116 1.935 ETKDGv3 10
G6Y CAI -2.486 -1.042 0.117 ETKDGv3 11
G6Y CAJ -1.931 -1.202 -0.940 ETKDGv3 12
G6Y CAK -1.231 -1.391 -2.220 ETKDGv3 13
G6Y CBC -0.638 -2.800 -2.299 ETKDGv3 14
G6Y CAL -0.159 -0.337 -2.401 ETKDGv3 15
G6Y CAM 0.787 -0.130 -1.464 ETKDGv3 16
G6Y CAQ -0.122 0.460 -3.651 ETKDGv3 17
G6Y CAP 0.825 1.386 -3.848 ETKDGv3 18
G6Y OAX 0.814 2.109 -5.049 ETKDGv3 19
G6Y CAY 1.763 3.115 -5.382 ETKDGv3 20
G6Y CAO 1.848 1.619 -2.795 ETKDGv3 21
G6Y CAN 1.836 0.904 -1.655 ETKDGv3 22
G6Y CAR 2.850 1.144 -0.598 ETKDGv3 23
G6Y CAS 4.269 1.399 -0.960 ETKDGv3 24
G6Y CAT 5.184 1.620 -0.009 ETKDGv3 25
G6Y CAU 4.799 1.612 1.424 ETKDGv3 26
G6Y CAZ 5.822 1.860 2.463 ETKDGv3 27
G6Y OBB 5.512 1.855 3.686 ETKDGv3 28
G6Y OBA 7.143 2.101 2.096 ETKDGv3 29
G6Y CAV 3.515 1.376 1.753 ETKDGv3 30
G6Y CAW 2.504 1.132 0.703 ETKDGv3 31
G6Y H1 -3.807 -4.334 2.231 ETKDGv3 32
G6Y H2 -2.776 -3.849 0.823 ETKDGv3 33
G6Y H3 -4.238 -4.872 0.562 ETKDGv3 34
G6Y H4 -4.706 -2.516 -0.110 ETKDGv3 35
G6Y H5 -5.717 -3.019 1.276 ETKDGv3 36
G6Y H6 -4.594 0.466 5.791 ETKDGv3 37
G6Y H7 -5.705 -0.914 5.473 ETKDGv3 38
G6Y H8 -1.136 1.041 1.010 ETKDGv3 39
G6Y H9 -1.300 1.863 2.593 ETKDGv3 40
G6Y H10 -1.991 -1.294 -3.026 ETKDGv3 41
G6Y H11 -1.447 -3.559 -2.222 ETKDGv3 42
G6Y H12 -0.123 -2.940 -3.273 ETKDGv3 43
G6Y H13 0.091 -2.973 -1.479 ETKDGv3 44
G6Y H14 0.791 -0.727 -0.560 ETKDGv3 45
G6Y H15 -0.867 0.289 -4.418 ETKDGv3 46
G6Y H16 1.712 3.945 -4.646 ETKDGv3 47
G6Y H17 2.786 2.684 -5.402 ETKDGv3 48
G6Y H18 1.527 3.518 -6.388 ETKDGv3 49
G6Y H19 2.594 2.390 -2.939 ETKDGv3 50
G6Y H20 4.577 1.392 -1.998 ETKDGv3 51
G6Y H21 6.212 1.798 -0.298 ETKDGv3 52
G6Y H22 7.855 2.273 2.797 ETKDGv3 53
G6Y H23 3.196 1.363 2.787 ETKDGv3 54
G6Y H24 1.478 0.968 1.005 ETKDGv3 55
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