data_GP8
#
_chem_comp.id GP8
_chem_comp.name 1-(2-AMIDINOPHENYL)-3-(PHENOXYPHENYL)UREA
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H18 N4 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 346.383
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GP8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1BJV
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GP8 N1 N1 N 0 1 N N N N N N -2.849 13.823 13.808 -1.581 0.596 7.696 N1 GP8 1
GP8 N2 N2 N 0 1 N N N N N N -1.997 12.007 14.980 -2.403 -1.301 6.640 N2 GP8 2
GP8 C1 C1 C 0 1 N N N N N N -2.323 13.313 14.928 -1.592 -0.281 6.634 C1 GP8 3
GP8 C2 C2 C 0 1 Y N N N N N -1.864 14.166 15.964 -0.683 -0.066 5.487 C2 GP8 4
GP8 C3 C3 C 0 1 Y N N N N N -1.898 15.564 15.827 -0.693 -0.955 4.411 C3 GP8 5
GP8 C4 C4 C 0 1 Y N N N N N -1.502 16.410 16.865 0.154 -0.752 3.344 C4 GP8 6
GP8 C5 C5 C 0 1 Y N N N N N -1.056 15.870 18.080 1.020 0.336 3.339 C5 GP8 7
GP8 C6 C6 C 0 1 Y N N N N N -1.004 14.481 18.252 1.031 1.223 4.410 C6 GP8 8
GP8 C7 C7 C 0 1 Y N N N N N -1.404 13.653 17.199 0.182 1.028 5.477 C7 GP8 9
GP8 N3 N3 N 0 1 N N N N N N -0.674 16.687 19.084 1.878 0.539 2.257 N3 GP8 10
GP8 C8 C8 C 0 1 N N N N N N 0.259 17.646 19.003 1.490 0.189 1.015 C8 GP8 11
GP8 O1 O1 O 0 1 N N N N N N 0.829 17.930 17.932 0.356 -0.203 0.820 O1 GP8 12
GP8 N4 N4 N 0 1 N N N N N N 0.570 18.281 20.130 2.359 0.275 -0.011 N4 GP8 13
GP8 C9 C9 C 0 1 Y N N N N N 1.449 19.274 20.258 1.928 0.010 -1.318 C9 GP8 14
GP8 C10 C10 C 0 1 Y N N N N N 1.031 20.401 20.965 0.632 0.328 -1.699 C10 GP8 15
GP8 C11 C11 C 0 1 Y N N N N N 1.963 21.413 21.197 0.208 0.068 -2.987 C11 GP8 16
GP8 C12 C12 C 0 1 Y N N N N N 3.283 21.290 20.724 1.077 -0.511 -3.900 C12 GP8 17
GP8 C13 C13 C 0 1 Y N N N N N 3.667 20.137 20.025 2.373 -0.828 -3.520 C13 GP8 18
GP8 C14 C14 C 0 1 Y N N N N N 2.744 19.112 19.782 2.799 -0.564 -2.234 C14 GP8 19
GP8 O2 O2 O 0 1 N N N N N N 4.200 22.281 20.926 0.659 -0.767 -5.168 O2 GP8 20
GP8 C15 C15 C 0 1 Y N N N N N 4.756 22.743 22.083 -0.591 -0.249 -5.282 C15 GP8 21
GP8 C16 C16 C 0 1 Y N N N N N 5.795 23.673 21.985 -0.764 1.068 -5.680 C16 GP8 22
GP8 C17 C17 C 0 1 Y N N N N N 6.392 24.185 23.136 -2.037 1.592 -5.795 C17 GP8 23
GP8 C18 C18 C 0 1 Y N N N N N 5.956 23.772 24.394 -3.139 0.805 -5.513 C18 GP8 24
GP8 C19 C19 C 0 1 Y N N N N N 4.923 22.839 24.501 -2.969 -0.508 -5.116 C19 GP8 25
GP8 C20 C20 C 0 1 Y N N N N N 4.320 22.323 23.351 -1.698 -1.039 -5.005 C20 GP8 26
GP8 HN11 1HN1 H 0 0 N N N N N N -3.095 14.811 13.768 -0.975 1.353 7.693 HN11 GP8 27
GP8 HN12 2HN1 H 0 0 N N N N N N -3.671 13.273 13.557 -2.178 0.455 8.448 HN12 GP8 28
GP8 HN2 HN2 H 0 1 N N N N N N -2.730 11.298 14.940 -2.411 -1.919 5.892 HN2 GP8 29
GP8 H3 H3 H 0 1 N N N N N N -2.244 16.009 14.879 -1.364 -1.801 4.414 H3 GP8 30
GP8 H4 H4 H 0 1 N N N N N N -1.541 17.503 16.725 0.148 -1.440 2.511 H4 GP8 31
GP8 H6 H6 H 0 1 N N N N N N -0.653 14.045 19.202 1.704 2.068 4.403 H6 GP8 32
GP8 H7 H7 H 0 1 N N N N N N -1.355 12.561 17.347 0.191 1.718 6.308 H7 GP8 33
GP8 HN3 HN3 H 0 1 N N N N N N -0.401 16.083 19.859 2.753 0.931 2.399 HN3 GP8 34
GP8 HN4 HN4 H 0 1 N N N N N N 0.088 17.977 20.976 3.283 0.519 0.154 HN4 GP8 35
GP8 H10 H10 H 0 1 N N N N N N -0.006 20.489 21.329 -0.044 0.779 -0.989 H10 GP8 36
GP8 H11 H11 H 0 1 N N N N N N 1.655 22.312 21.755 -0.800 0.316 -3.284 H11 GP8 37
GP8 H13 H13 H 0 1 N N N N N N 4.704 20.035 19.663 3.049 -1.279 -4.231 H13 GP8 38
GP8 H14 H14 H 0 1 N N N N N N 3.029 18.200 19.230 3.808 -0.811 -1.937 H14 GP8 39
GP8 H16 H16 H 0 1 N N N N N N 6.145 24.004 20.993 0.094 1.684 -5.899 H16 GP8 40
GP8 H17 H17 H 0 1 N N N N N N 7.211 24.918 23.051 -2.173 2.618 -6.104 H17 GP8 41
GP8 H18 H18 H 0 1 N N N N N N 6.427 24.182 25.302 -4.133 1.217 -5.603 H18 GP8 42
GP8 H19 H19 H 0 1 N N N N N N 4.582 22.508 25.496 -3.831 -1.120 -4.896 H19 GP8 43
GP8 H20 H20 H 0 1 N N N N N N 3.503 21.587 23.443 -1.567 -2.065 -4.695 H20 GP8 44
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GP8 N1 C1 SING N N 1
GP8 N1 HN11 SING N N 2
GP8 N1 HN12 SING N N 3
GP8 N2 C1 DOUB N N 4
GP8 N2 HN2 SING N N 5
GP8 C1 C2 SING N N 6
GP8 C2 C3 DOUB Y N 7
GP8 C2 C7 SING Y N 8
GP8 C3 C4 SING Y N 9
GP8 C3 H3 SING N N 10
GP8 C4 C5 DOUB Y N 11
GP8 C4 H4 SING N N 12
GP8 C5 C6 SING Y N 13
GP8 C5 N3 SING N N 14
GP8 C6 C7 DOUB Y N 15
GP8 C6 H6 SING N N 16
GP8 C7 H7 SING N N 17
GP8 N3 C8 SING N N 18
GP8 N3 HN3 SING N N 19
GP8 C8 O1 DOUB N N 20
GP8 C8 N4 SING N N 21
GP8 N4 C9 SING N N 22
GP8 N4 HN4 SING N N 23
GP8 C9 C10 DOUB Y N 24
GP8 C9 C14 SING Y N 25
GP8 C10 C11 SING Y N 26
GP8 C10 H10 SING N N 27
GP8 C11 C12 DOUB Y N 28
GP8 C11 H11 SING N N 29
GP8 C12 C13 SING Y N 30
GP8 C12 O2 SING N N 31
GP8 C13 C14 DOUB Y N 32
GP8 C13 H13 SING N N 33
GP8 C14 H14 SING N N 34
GP8 O2 C15 SING N N 35
GP8 C15 C16 DOUB Y N 36
GP8 C15 C20 SING Y N 37
GP8 C16 C17 SING Y N 38
GP8 C16 H16 SING N N 39
GP8 C17 C18 DOUB Y N 40
GP8 C17 H17 SING N N 41
GP8 C18 C19 SING Y N 42
GP8 C18 H18 SING N N 43
GP8 C19 C20 DOUB Y N 44
GP8 C19 H19 SING N N 45
GP8 C20 H20 SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GP8 SMILES ACDLabs 10.04 O=C(Nc1ccc(C(=[N@H])N)cc1)Nc3ccc(Oc2ccccc2)cc3
GP8 SMILES_CANONICAL CACTVS 3.341 NC(=N)c1ccc(NC(=O)Nc2ccc(Oc3ccccc3)cc2)cc1
GP8 SMILES CACTVS 3.341 NC(=N)c1ccc(NC(=O)Nc2ccc(Oc3ccccc3)cc2)cc1
GP8 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)Oc2ccc(cc2)NC(=O)Nc3ccc(cc3)C(=N)N
GP8 SMILES "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)Oc2ccc(cc2)NC(=O)Nc3ccc(cc3)C(=N)N
GP8 InChI InChI 1.03 InChI=1S/C20H18N4O2/c21-19(22)14-6-8-15(9-7-14)23-20(25)24-16-10-12-18(13-11-16)26-17-4-2-1-3-5-17/h1-13H,(H3,21,22)(H2,23,24,25)
GP8 InChIKey InChI 1.03 ZHCAYBOLUMAUQX-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GP8 "SYSTEMATIC NAME" ACDLabs 10.04 4-{[(4-phenoxyphenyl)carbamoyl]amino}benzenecarboximidamide
GP8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 1-(4-carbamimidoylphenyl)-3-(4-phenoxyphenyl)urea
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GP8 'Create component' 1999-07-08 RCSB
GP8 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id GP8
_pdbe_chem_comp_drugbank_details.drugbank_id DB03337
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 1-(2-Amidinophenyl)-3-(Phenoxyphenyl)Urea
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id GP8
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03337
_pdbe_chem_comp_drugbank_classification.parent Diphenylethers
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Benzene and substituted derivatives'
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as diphenylethers. These are aromatic compounds containing two benzene rings linked to each other through an ether group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id GP8
_pdbe_chem_comp_drugbank_targets.drugbank_id DB03337
_pdbe_chem_comp_drugbank_targets.name Trypsin-1
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P07477
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
GP8 N1 N 3.805 -7.785 1
GP8 N2 N 6.404 -7.785 2
GP8 C1 C 5.104 -7.035 3
GP8 C2 C 5.104 -5.535 4
GP8 C3 C 3.805 -4.785 5
GP8 C4 C 3.805 -3.285 6
GP8 C5 C 5.104 -2.535 7
GP8 C6 C 6.404 -3.285 8
GP8 C7 C 6.404 -4.785 9
GP8 N3 N 5.104 -1.035 10
GP8 C8 C 6.404 -0.285 11
GP8 O1 O 7.702 -1.035 12
GP8 N4 N 6.404 1.215 13
GP8 C9 C 7.702 1.965 14
GP8 C10 C 9.002 1.215 15
GP8 C11 C 10.301 1.965 16
GP8 C12 C 10.301 3.465 17
GP8 C13 C 9.002 4.215 18
GP8 C14 C 7.702 3.465 19
GP8 O2 O 11.600 4.215 20
GP8 C15 C 11.600 5.715 21
GP8 C16 C 12.899 6.465 22
GP8 C17 C 12.899 7.965 23
GP8 C18 C 11.600 8.715 24
GP8 C19 C 10.301 7.965 25
GP8 C20 C 10.301 6.465 26
GP8 HN2 H 7.703 -7.035 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
GP8 N1 C1 SINGLE ENDUPRIGHT 1
GP8 N2 C1 DOUBLE NONE 2
GP8 C1 C2 SINGLE ENDUPRIGHT 3
GP8 C2 C3 DOUBLE NONE 4
GP8 C2 C7 SINGLE NONE 5
GP8 C3 C4 SINGLE NONE 6
GP8 C4 C5 DOUBLE NONE 7
GP8 C5 C6 SINGLE NONE 8
GP8 C5 N3 SINGLE NONE 9
GP8 C6 C7 DOUBLE NONE 10
GP8 N3 C8 SINGLE NONE 11
GP8 C8 O1 DOUBLE NONE 12
GP8 C8 N4 SINGLE NONE 13
GP8 N4 C9 SINGLE NONE 14
GP8 C9 C10 DOUBLE NONE 15
GP8 C9 C14 SINGLE NONE 16
GP8 C10 C11 SINGLE NONE 17
GP8 C11 C12 DOUBLE NONE 18
GP8 C12 C13 SINGLE NONE 19
GP8 C12 O2 SINGLE NONE 20
GP8 C13 C14 DOUBLE NONE 21
GP8 O2 C15 SINGLE NONE 22
GP8 C15 C16 DOUBLE NONE 23
GP8 C15 C20 SINGLE NONE 24
GP8 C16 C17 SINGLE NONE 25
GP8 C17 C18 DOUBLE NONE 26
GP8 C18 C19 SINGLE NONE 27
GP8 C19 C20 DOUBLE NONE 28
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
GP8 MurckoScaffold S1 scaffold O=C(Nc1ccccc1)Nc1ccc(Oc2ccccc2)cc1 InChI=1S/C19H16N2O2/c22-19(20-15-7-3-1-4-8-15)21-16-11-13-18(14-12-16)23-17-9-5-2-6-10-17/h1-14H,(H2,20,21,22) DUNHEWVUYXOHIL-UHFFFAOYSA-N
GP8 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
GP8 C2 S1 1
GP8 C3 S1 1
GP8 C4 S1 1
GP8 C5 S1 1
GP8 C6 S1 1
GP8 C7 S1 1
GP8 N3 S1 1
GP8 C8 S1 1
GP8 O1 S1 1
GP8 N4 S1 1
GP8 C9 S1 1
GP8 C10 S1 1
GP8 C11 S1 1
GP8 C12 S1 1
GP8 C13 S1 1
GP8 C14 S1 1
GP8 O2 S1 1
GP8 C15 S1 1
GP8 C16 S1 1
GP8 C17 S1 1
GP8 C18 S1 1
GP8 C19 S1 1
GP8 C20 S1 1
GP8 C2 F1 1
GP8 C3 F1 1
GP8 C4 F1 1
GP8 C5 F1 1
GP8 C6 F1 1
GP8 C7 F1 1
GP8 C9 F1 2
GP8 C10 F1 2
GP8 C11 F1 2
GP8 C12 F1 2
GP8 C13 F1 2
GP8 C14 F1 2
GP8 C15 F1 3
GP8 C16 F1 3
GP8 C17 F1 3
GP8 C18 F1 3
GP8 C19 F1 3
GP8 C20 F1 3
#
_pdbe_chem_comp_rdkit_properties.comp_id GP8
_pdbe_chem_comp_rdkit_properties.exactmw 346.143
_pdbe_chem_comp_rdkit_properties.amw 346.390
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 44
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 176.255
_pdbe_chem_comp_rdkit_properties.tpsa 100.230
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.666
_pdbe_chem_comp_rdkit_properties.CrippenMR 99.924
_pdbe_chem_comp_rdkit_properties.chi0v 12.605
_pdbe_chem_comp_rdkit_properties.chi1v 6.704
_pdbe_chem_comp_rdkit_properties.chi2v 2.520
_pdbe_chem_comp_rdkit_properties.chi3v 2.520
_pdbe_chem_comp_rdkit_properties.chi4v 1.483
_pdbe_chem_comp_rdkit_properties.chi0n 30.605
_pdbe_chem_comp_rdkit_properties.chi1n 15.440
_pdbe_chem_comp_rdkit_properties.chi2n 2.520
_pdbe_chem_comp_rdkit_properties.chi3n 2.520
_pdbe_chem_comp_rdkit_properties.chi4n 1.483
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.800
_pdbe_chem_comp_rdkit_properties.kappa1 5.603
_pdbe_chem_comp_rdkit_properties.kappa2 7.848
_pdbe_chem_comp_rdkit_properties.kappa3 4.608
_pdbe_chem_comp_rdkit_properties.Phi 1.691
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
GP8 UniChem ChEMBL CHEMBL1233097
GP8 UniChem DrugBank DB03337
GP8 UniChem PDBe GP8
GP8 UniChem ZINC ZINC000000009048
GP8 UniChem 'PubChem TPHARMA' 14827494
GP8 UniChem PubChem 444581
GP8 UniChem Nikkaji J1.051.068F
GP8 UniChem BindingDb 50514490
GP8 UniChem BRENDA 65478
GP8 UniChem 'Probes And Drugs' PD007073
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
GP8 N1 -9.049 0.191 0.399 ETKDGv3 1
GP8 N2 -8.036 -0.666 2.349 ETKDGv3 2
GP8 C1 -7.891 -0.194 1.150 ETKDGv3 3
GP8 C2 -6.530 -0.050 0.573 ETKDGv3 4
GP8 C3 -5.453 0.081 1.373 ETKDGv3 5
GP8 C4 -4.100 0.232 0.797 ETKDGv3 6
GP8 C5 -3.921 0.211 -0.536 ETKDGv3 7
GP8 C6 -5.101 0.071 -1.418 ETKDGv3 8
GP8 C7 -6.328 -0.059 -0.899 ETKDGv3 9
GP8 N3 -2.622 0.388 -1.127 ETKDGv3 10
GP8 C8 -1.399 -0.103 -0.558 ETKDGv3 11
GP8 O1 -1.428 -0.937 0.388 ETKDGv3 12
GP8 N4 -0.143 0.299 -1.129 ETKDGv3 13
GP8 C9 1.140 0.029 -0.538 ETKDGv3 14
GP8 C10 1.321 0.038 0.796 ETKDGv3 15
GP8 C11 2.661 -0.209 1.369 ETKDGv3 16
GP8 C12 3.718 -0.404 0.569 ETKDGv3 17
GP8 C13 3.522 -0.411 -0.904 ETKDGv3 18
GP8 C14 2.307 -0.196 -1.423 ETKDGv3 19
GP8 O2 4.972 -0.642 1.148 ETKDGv3 20
GP8 C15 6.202 -0.307 0.567 ETKDGv3 21
GP8 C16 7.283 -1.041 0.867 ETKDGv3 22
GP8 C17 8.599 -0.710 0.281 ETKDGv3 23
GP8 C18 8.721 0.337 -0.543 ETKDGv3 24
GP8 C19 7.543 1.170 -0.858 ETKDGv3 25
GP8 C20 6.349 0.871 -0.330 ETKDGv3 26
GP8 HN11 -8.966 0.711 -0.502 ETKDGv3 27
GP8 HN12 -10.007 0.027 0.780 ETKDGv3 28
GP8 HN2 -8.978 -0.778 2.787 ETKDGv3 29
GP8 H3 -5.558 0.101 2.451 ETKDGv3 30
GP8 H4 -3.269 0.392 1.470 ETKDGv3 31
GP8 H6 -4.970 0.056 -2.493 ETKDGv3 32
GP8 H7 -7.166 -0.195 -1.570 ETKDGv3 33
GP8 HN3 -2.576 0.825 -2.075 ETKDGv3 34
GP8 HN4 -0.159 0.738 -2.077 ETKDGv3 35
GP8 H10 0.504 0.254 1.470 ETKDGv3 36
GP8 H11 2.785 -0.214 2.444 ETKDGv3 37
GP8 H13 4.354 -0.609 -1.566 ETKDGv3 38
GP8 H14 2.174 -0.206 -2.498 ETKDGv3 39
GP8 H16 7.197 -1.890 1.534 ETKDGv3 40
GP8 H17 9.462 -1.319 0.518 ETKDGv3 41
GP8 H18 9.684 0.581 -0.973 ETKDGv3 42
GP8 H19 7.650 2.030 -1.507 ETKDGv3 43
GP8 H20 5.500 1.507 -0.544 ETKDGv3 44
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