data_H01
#
_chem_comp.id H01
_chem_comp.name "PROTOPORPHYRIN IX 2,4-DISULFONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H32 N4 O10 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "3,3'-(3,7,12,17-TETRAMETHYL-8,13-DISULFO-22,24-DIHYDROPORPHYRIN-2,18-DIYL)DIPROPANOIC ACID"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-06-11
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 672.726
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code H01
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details "Corina V3.40"
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H01 N1 N1 N 0 1 N N N N N N 26.837 -3.019 1.925 1.877 -1.141 -0.007 N1 H01 1
H01 C11 C11 C 0 1 N N N N N N 27.545 -1.880 1.758 1.678 -2.515 -0.006 C11 H01 2
H01 C12 C12 C 0 1 N N N N N N 27.162 -0.982 2.751 2.939 -3.135 -0.218 C12 H01 3
H01 O1 O1 O 0 1 N N N N N N 27.693 1.398 1.655 2.194 -5.401 -1.140 O1 H01 4
H01 O2 O2 O 0 1 N N N N N N 29.226 0.638 3.386 4.611 -5.027 -0.622 O2 H01 5
H01 C13 C13 C 0 1 N N N N N N 26.198 -1.610 3.521 3.875 -2.170 -0.322 C13 H01 6
H01 C15 C15 C 0 1 N N N N N N 25.157 -3.857 3.455 3.881 0.289 -0.196 C15 H01 7
H01 C14 C14 C 0 1 N N N N N N 26.007 -2.873 2.981 3.237 -0.909 -0.176 C14 H01 8
H01 C16 C16 C 0 1 N N N N N N 22.465 -7.965 2.486 3.031 5.250 0.293 C16 H01 9
H01 O3 O3 O 0 1 N N N N N N 26.980 1.379 3.994 3.021 -5.448 1.067 O3 H01 10
H01 O4 O4 O 0 1 N N N N N N 23.362 -4.513 5.645 5.936 3.284 -1.447 O4 H01 11
H01 C21 C21 C 0 1 Y N N N N N 24.667 -4.997 2.835 3.177 1.559 -0.044 C21 H01 12
H01 C22 C22 C 0 1 Y N N N N N 23.655 -5.818 3.298 3.805 2.792 0.045 C22 H01 13
H01 C23 C23 C 0 1 Y N N N N N 23.487 -6.823 2.386 2.811 3.764 0.168 C23 H01 14
H01 C24 C24 C 0 1 Y N N N N N 24.419 -6.615 1.372 1.586 3.116 0.153 C24 H01 15
H01 C25 C25 C 0 1 N N N N N N 24.630 -7.369 0.223 0.297 3.796 0.236 C25 H01 16
H01 C26 C26 C 0 1 N N N N N N 25.448 -1.043 4.747 5.347 -2.391 -0.554 C26 H01 17
H01 O41 O41 O 0 1 N N N N N N 29.360 -10.491 -4.848 -7.204 3.307 0.250 O41 H01 18
H01 C49 C49 C 0 1 N N N N N N 29.806 -9.478 -4.270 -6.678 3.105 -0.819 C49 H01 19
H01 O42 O42 O 0 1 N N N N N N 30.884 -8.866 -4.513 -7.420 3.072 -1.937 O42 H01 20
H01 C48 C48 C 0 1 N N N N N N 28.964 -8.951 -3.138 -5.188 2.890 -0.897 C48 H01 21
H01 C47 C47 C 0 1 N N N N N N 27.734 -8.205 -3.642 -4.586 2.977 0.507 C47 H01 22
H01 C33 C33 C 0 1 N N N N N N 27.046 -7.588 -2.419 -3.096 2.762 0.429 C33 H01 23
H01 C32 C32 C 0 1 N N N N N N 25.958 -8.091 -1.757 -2.162 3.732 0.353 C32 H01 24
H01 C46 C46 C 0 1 N N N N N N 25.191 -9.371 -2.152 -2.431 5.215 0.333 C46 H01 25
H01 C31 C31 C 0 1 N N N N N N 25.659 -7.246 -0.699 -0.883 3.119 0.294 C31 H01 26
H01 N3 N3 N 0 1 N N N N N N 26.562 -6.246 -0.694 -1.073 1.742 0.315 N3 H01 27
H01 C34 C34 C 0 1 N N N N N N 27.423 -6.435 -1.722 -2.437 1.503 0.424 C34 H01 28
H01 C35 C35 C 0 1 N N N N N N 28.493 -5.595 -2.028 -3.077 0.307 0.523 C35 H01 29
H01 C41 C41 C 0 1 Y N N N N N 28.911 -4.364 -1.514 -2.368 -0.970 0.506 C41 H01 30
H01 N4 N4 N 0 1 Y N N N N N 28.270 -3.743 -0.511 -1.023 -1.175 0.315 N4 H01 31
H01 C42 C42 C 0 1 Y N N N N N 30.006 -3.572 -1.906 -2.969 -2.205 0.684 C42 H01 32
H01 C37 C37 C 0 1 N N N N N N 31.080 -3.832 -3.001 -4.434 -2.454 0.937 C37 H01 33
H01 C38 C38 C 0 1 N N N N N N 30.565 -4.608 -4.223 -5.160 -2.629 -0.398 C38 H01 34
H01 C39 C39 C 0 1 N N N N N N 30.082 -3.691 -5.354 -6.624 -2.878 -0.144 C39 H01 35
H01 O32 O32 O 0 1 N N N N N N 29.360 -2.716 -5.045 -7.463 -3.063 -1.176 O32 H01 36
H01 O31 O31 O 0 1 N N N N N N 30.431 -4.002 -6.510 -7.044 -2.912 0.988 O31 H01 37
H01 C43 C43 C 0 1 Y N N N N N 29.964 -2.462 -1.081 -1.972 -3.178 0.585 C43 H01 38
H01 C36 C36 C 0 1 N N N N N N 30.941 -1.269 -1.084 -2.166 -4.667 0.714 C36 H01 39
H01 C44 C44 C 0 1 Y N N N N N 28.889 -2.584 -0.230 -0.772 -2.527 0.347 C44 H01 40
H01 C45 C45 C 0 1 N N N N N N 28.477 -1.687 0.751 0.509 -3.196 0.159 C45 H01 41
H01 S1 S1 S 0 1 N N N N N N 27.791 0.656 2.952 3.230 -4.870 -0.325 S1 H01 42
H01 N2 N2 N 0 1 Y N N N N N 25.120 -5.501 1.673 1.821 1.766 0.044 N2 H01 43
H01 S2 S2 S 0 1 N N N N N N 22.730 -5.577 4.788 5.543 3.080 0.009 S2 H01 44
H01 O5 O5 O 0 1 N N N N N N 22.661 -6.857 5.576 6.158 1.868 0.425 O5 H01 45
H01 O6 O6 O 0 1 N N N N N N 21.354 -5.149 4.419 5.757 4.324 0.661 O6 H01 46
H01 HN1 HN1 H 0 1 N N N N N N 26.915 -3.839 1.358 1.189 -0.463 0.089 HN1 H01 47
H01 H15 H15 H 0 1 N N N N N N 24.821 -3.714 4.471 4.959 0.308 -0.331 H15 H01 48
H01 H161 1H16 H 0 0 N N N N N N 22.221 -8.328 1.477 3.047 5.700 -0.700 H161 H01 49
H01 H162 2H16 H 0 0 N N N N N N 22.892 -8.788 3.079 2.222 5.689 0.878 H162 H01 50
H01 H163 3H16 H 0 0 N N N N N N 21.551 -7.597 2.974 3.982 5.436 0.792 H163 H01 51
H01 HO3 HO3 H 0 1 N N N N N N 27.516 1.531 4.764 3.158 -6.404 1.120 HO3 H01 52
H01 HO4 HO4 H 0 1 N N N N N N 23.495 -4.851 6.523 6.879 3.451 -1.580 HO4 H01 53
H01 H25 H25 H 0 1 N N N N N N 23.905 -8.144 0.024 0.282 4.883 0.252 H25 H01 54
H01 H261 1H26 H 0 0 N N N N N N 26.154 -0.908 5.579 5.548 -2.405 -1.626 H261 H01 55
H01 H262 2H26 H 0 0 N N N N N N 25.000 -0.073 4.486 5.913 -1.585 -0.089 H262 H01 56
H01 H263 3H26 H 0 0 N N N N N N 24.656 -1.744 5.048 5.644 -3.344 -0.116 H263 H01 57
H01 HO42 HO42 H 0 0 N N N N N N 31.338 -9.295 -5.229 -8.371 3.215 -1.836 HO42 H01 58
H01 H481 1H48 H 0 0 N N N N N N 28.633 -9.800 -2.521 -4.985 1.906 -1.319 H481 H01 59
H01 H482 2H48 H 0 0 N N N N N N 29.576 -8.246 -2.556 -4.743 3.657 -1.531 H482 H01 60
H01 H471 1H47 H 0 0 N N N N N N 28.030 -7.417 -4.350 -4.790 3.961 0.929 H471 H01 61
H01 H472 2H47 H 0 0 N N N N N N 27.052 -8.889 -4.169 -5.031 2.211 1.141 H472 H01 62
H01 H461 1H46 H 0 0 N N N N N N 25.009 -9.370 -3.237 -2.437 5.597 1.354 H461 H01 63
H01 H462 2H46 H 0 0 N N N N N N 25.788 -10.254 -1.882 -1.651 5.718 -0.238 H462 H01 64
H01 H463 3H46 H 0 0 N N N N N N 24.229 -9.401 -1.619 -3.399 5.403 -0.131 H463 H01 65
H01 HN3 HN3 H 0 1 N N N N N N 26.591 -5.490 -0.040 -0.377 1.067 0.264 HN3 H01 66
H01 H35 H35 H 0 1 N N N N N N 29.125 -5.970 -2.820 -4.160 0.309 0.618 H35 H01 67
H01 HN4 HN4 H 0 1 N N N N N N 27.456 -4.090 -0.044 -0.359 -0.481 0.179 HN4 H01 68
H01 H371 1H37 H 0 0 N N N N N N 31.448 -2.856 -3.351 -4.550 -3.357 1.536 H371 H01 69
H01 H372 2H37 H 0 0 N N N N N N 31.861 -4.453 -2.538 -4.859 -1.605 1.474 H372 H01 70
H01 H381 1H38 H 0 0 N N N N N N 31.386 -5.230 -4.609 -5.043 -1.726 -0.996 H381 H01 71
H01 H382 2H38 H 0 0 N N N N N N 29.705 -5.211 -3.895 -4.735 -3.478 -0.934 H382 H01 72
H01 HO32 HO32 H 0 0 N N N N N N 29.114 -2.242 -5.831 -8.393 -3.219 -0.964 HO32 H01 73
H01 H361 1H36 H 0 0 N N N N N N 31.174 -0.982 -0.048 -2.378 -5.092 -0.267 H361 H01 74
H01 H362 2H36 H 0 0 N N N N N N 31.868 -1.556 -1.602 -1.259 -5.117 1.118 H362 H01 75
H01 H363 3H36 H 0 0 N N N N N N 30.478 -0.418 -1.605 -3.001 -4.867 1.385 H363 H01 76
H01 H45 H45 H 0 1 N N N N N N 28.945 -0.714 0.724 0.542 -4.283 0.150 H45 H01 77
H01 HN2 HN2 H 0 1 N N N N N N 25.858 -5.113 1.121 1.142 1.074 0.031 HN2 H01 78
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H01 N1 C11 SING N N 1
H01 N1 C14 SING N N 2
H01 N1 HN1 SING N N 3
H01 C11 C45 DOUB N Z 4
H01 C11 C12 SING N N 5
H01 C12 S1 SING N N 6
H01 C12 C13 DOUB N N 7
H01 O1 S1 DOUB N N 8
H01 O2 S1 DOUB N N 9
H01 C13 C14 SING N N 10
H01 C13 C26 SING N N 11
H01 C15 C21 SING N N 12
H01 C15 C14 DOUB N Z 13
H01 C15 H15 SING N N 14
H01 C16 C23 SING N N 15
H01 C16 H161 SING N N 16
H01 C16 H162 SING N N 17
H01 C16 H163 SING N N 18
H01 O3 S1 SING N N 19
H01 O3 HO3 SING N N 20
H01 O4 S2 SING N N 21
H01 O4 HO4 SING N N 22
H01 C21 N2 SING Y N 23
H01 C21 C22 DOUB Y N 24
H01 C22 C23 SING Y N 25
H01 C22 S2 SING N N 26
H01 C23 C24 DOUB Y N 27
H01 C24 C25 SING N N 28
H01 C24 N2 SING Y N 29
H01 C25 C31 DOUB N Z 30
H01 C25 H25 SING N N 31
H01 C26 H261 SING N N 32
H01 C26 H262 SING N N 33
H01 C26 H263 SING N N 34
H01 O41 C49 DOUB N N 35
H01 C49 O42 SING N N 36
H01 C49 C48 SING N N 37
H01 O42 HO42 SING N N 38
H01 C48 C47 SING N N 39
H01 C48 H481 SING N N 40
H01 C48 H482 SING N N 41
H01 C47 C33 SING N N 42
H01 C47 H471 SING N N 43
H01 C47 H472 SING N N 44
H01 C33 C32 DOUB N N 45
H01 C33 C34 SING N N 46
H01 C32 C46 SING N N 47
H01 C32 C31 SING N N 48
H01 C46 H461 SING N N 49
H01 C46 H462 SING N N 50
H01 C46 H463 SING N N 51
H01 C31 N3 SING N N 52
H01 N3 C34 SING N N 53
H01 N3 HN3 SING N N 54
H01 C34 C35 DOUB N Z 55
H01 C35 C41 SING N N 56
H01 C35 H35 SING N N 57
H01 C41 C42 DOUB Y N 58
H01 C41 N4 SING Y N 59
H01 N4 C44 SING Y N 60
H01 N4 HN4 SING N N 61
H01 C42 C37 SING N N 62
H01 C42 C43 SING Y N 63
H01 C37 C38 SING N N 64
H01 C37 H371 SING N N 65
H01 C37 H372 SING N N 66
H01 C38 C39 SING N N 67
H01 C38 H381 SING N N 68
H01 C38 H382 SING N N 69
H01 C39 O31 DOUB N N 70
H01 C39 O32 SING N N 71
H01 O32 HO32 SING N N 72
H01 C43 C36 SING N N 73
H01 C43 C44 DOUB Y N 74
H01 C36 H361 SING N N 75
H01 C36 H362 SING N N 76
H01 C36 H363 SING N N 77
H01 C44 C45 SING N N 78
H01 C45 H45 SING N N 79
H01 N2 HN2 SING N N 80
H01 S2 O6 DOUB N N 81
H01 S2 O5 DOUB N N 82
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H01 SMILES ACDLabs 10.04 O=S(=O)(O)C5=C(C=2NC5=Cc1c(c(c(n1)C=C4NC(=Cc3c(c(c(C=2)n3)S(=O)(=O)O)C)C(=C4CCC(=O)O)C)CCC(=O)O)C)C
H01 SMILES_CANONICAL CACTVS 3.341 CC/1=C(CCC(O)=O)\C2=C\c3[nH]c(\C=C4/N\C(=C/c5[nH]c(\C=C/1N2)c(C)c5[S](O)(=O)=O)C(=C4[S](O)(=O)=O)C)c(C)c3CCC(O)=O
H01 SMILES CACTVS 3.341 CC1=C(CCC(O)=O)C2=Cc3[nH]c(C=C4NC(=Cc5[nH]c(C=C1N2)c(C)c5[S](O)(=O)=O)C(=C4[S](O)(=O)=O)C)c(C)c3CCC(O)=O
H01 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1c\2[nH]c(c1CCC(=O)O)\C=C/3\C(=C(/C(=C/c4c(c(c([nH]4)C=C5C(=C(/C(=C2)/N5)S(=O)(=O)O)C)S(=O)(=O)O)C)/N3)C)CCC(=O)O
H01 SMILES "OpenEye OEToolkits" 1.5.0 Cc1c2[nH]c(c1CCC(=O)O)C=C3C(=C(C(=Cc4c(c(c([nH]4)C=C5C(=C(C(=C2)N5)S(=O)(=O)O)C)S(=O)(=O)O)C)N3)C)CCC(=O)O
H01 InChI InChI 1.03 InChI=1S/C30H32N4O10S2/c1-13-17(5-7-27(35)36)23-12-24-18(6-8-28(37)38)14(2)20(32-24)10-25-30(46(42,43)44)16(4)22(34-25)11-26-29(45(39,40)41)15(3)21(33-26)9-19(13)31-23/h9-12,31-34H,5-8H2,1-4H3,(H,35,36)(H,37,38)(H,39,40,41)(H,42,43,44)/b19-9-,20-10-,21-9-,22-11-,23-12-,24-12-,25-10-,26-11-
H01 InChIKey InChI 1.03 VFNOXNYLBHFZNR-IZAUZZAISA-N
#
_pdbx_chem_comp_identifier.comp_id H01
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 10.04
_pdbx_chem_comp_identifier.identifier
"3,3'-(3,7,12,17-tetramethyl-8,13-disulfo-22,24-dihydroporphyrin-2,18-diyl)dipropanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H01 'Create component' 2007-06-11 RCSB
H01 'Modify descriptor' 2011-06-04 RCSB
H01 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id H01
_pdbx_chem_comp_synonyms.name
"3,3'-(3,7,12,17-TETRAMETHYL-8,13-DISULFO-22,24-DIHYDROPORPHYRIN-2,18-DIYL)DIPROPANOIC ACID"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id H01
_pdbe_chem_comp_synonyms.name
"3,3'-(3,7,12,17-TETRAMETHYL-8,13-DISULFO-22,24-DIHYDROPORPHYRIN-2,18-DIYL)DIPROPANOIC ACID"
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
H01 N1 N 7.508 2.029 1
H01 C11 C 6.305 2.981 2
H01 C12 C 6.757 4.433 3
H01 O1 O 7.088 6.529 4
H01 O2 O 4.661 4.766 5
H01 C13 C 8.259 4.433 6
H01 C15 C 10.213 2.579 7
H01 C14 C 8.761 3.031 8
H01 C16 C 13.331 -1.608 9
H01 O3 O 4.992 6.861 10
H01 O4 O 14.469 2.651 11
H01 C21 C 10.662 1.178 12
H01 C22 C 12.116 0.776 13
H01 C23 C 12.116 -0.726 14
H01 C24 C 10.712 -1.128 15
H01 C25 C 10.263 -2.579 16
H01 C26 C 9.097 5.662 17
H01 O41 O 4.161 -8.075 18
H01 C49 C 3.551 -6.704 19
H01 O42 O 2.059 -6.548 20
H01 C48 C 4.433 -5.491 21
H01 C47 C 5.924 -5.648 22
H01 C33 C 6.807 -4.433 23
H01 C32 C 8.309 -4.433 24
H01 C46 C 9.218 -5.651 25
H01 C31 C 8.761 -2.981 26
H01 N3 N 7.558 -2.079 27
H01 C34 C 6.355 -3.031 28
H01 C35 C 4.904 -2.579 29
H01 C41 C 4.452 -1.178 30
H01 N4 N 5.303 -0.025 31
H01 C42 C 3.000 -0.776 32
H01 C37 C 1.785 -1.659 33
H01 C38 C 0.415 -1.049 34
H01 C39 C -0.799 -1.930 35
H01 O32 O -2.169 -1.320 36
H01 O31 O -0.642 -3.422 37
H01 C43 C 3.000 0.726 38
H01 C36 C 1.822 1.664 39
H01 C44 C 4.452 1.128 40
H01 C45 C 4.853 2.579 41
H01 S1 S 5.874 5.647 42
H01 N2 N 9.811 -0.025 43
H01 S2 S 13.296 1.716 44
H01 O5 O 14.230 0.543 45
H01 O6 O 12.361 2.889 46
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
H01 N1 C11 SINGLE ENDUPRIGHT 1
H01 N1 C14 SINGLE ENDUPRIGHT 2
H01 C11 C45 DOUBLE NONE 3
H01 C11 C12 SINGLE ENDUPRIGHT 4
H01 C12 S1 SINGLE NONE 5
H01 C12 C13 DOUBLE NONE 6
H01 O1 S1 DOUBLE NONE 7
H01 O2 S1 DOUBLE NONE 8
H01 C13 C14 SINGLE ENDDOWNRIGHT 9
H01 C13 C26 SINGLE NONE 10
H01 C15 C21 SINGLE ENDDOWNRIGHT 11
H01 C15 C14 DOUBLE NONE 12
H01 C16 C23 SINGLE NONE 13
H01 O3 S1 SINGLE NONE 14
H01 O4 S2 SINGLE NONE 15
H01 C21 N2 SINGLE NONE 16
H01 C21 C22 DOUBLE NONE 17
H01 C22 C23 SINGLE NONE 18
H01 C22 S2 SINGLE NONE 19
H01 C23 C24 DOUBLE NONE 20
H01 C24 C25 SINGLE ENDUPRIGHT 21
H01 C24 N2 SINGLE NONE 22
H01 C25 C31 DOUBLE NONE 23
H01 O41 C49 DOUBLE NONE 24
H01 C49 O42 SINGLE NONE 25
H01 C49 C48 SINGLE NONE 26
H01 C48 C47 SINGLE NONE 27
H01 C47 C33 SINGLE NONE 28
H01 C33 C32 DOUBLE NONE 29
H01 C33 C34 SINGLE ENDUPRIGHT 30
H01 C32 C46 SINGLE NONE 31
H01 C32 C31 SINGLE ENDDOWNRIGHT 32
H01 C31 N3 SINGLE ENDDOWNRIGHT 33
H01 N3 C34 SINGLE ENDDOWNRIGHT 34
H01 C34 C35 DOUBLE NONE 35
H01 C35 C41 SINGLE ENDUPRIGHT 36
H01 C41 C42 DOUBLE NONE 37
H01 C41 N4 SINGLE NONE 38
H01 N4 C44 SINGLE NONE 39
H01 C42 C37 SINGLE NONE 40
H01 C42 C43 SINGLE NONE 41
H01 C37 C38 SINGLE NONE 42
H01 C38 C39 SINGLE NONE 43
H01 C39 O31 DOUBLE NONE 44
H01 C39 O32 SINGLE NONE 45
H01 C43 C36 SINGLE NONE 46
H01 C43 C44 DOUBLE NONE 47
H01 C44 C45 SINGLE ENDUPRIGHT 48
H01 S2 O6 DOUBLE NONE 49
H01 S2 O5 DOUBLE NONE 50
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
H01 MurckoScaffold S1 scaffold 'C1=c2/cc/c([nH]2)=C/c2ccc([nH]2)/C=c2/cc/c([nH]2)=C/c2ccc/1[nH]2' InChI=1S/C20H16N4/c1-2-14-10-16-5-6-18(23-16)12-20-8-7-19(24-20)11-17-4-3-15(22-17)9-13(1)21-14/h1-12,21-24H/b13-9-,14-10-,15-9?,16-10?,17-11?,18-12?,19-11-,20-12- ZKSVMRIKVRPHQK-VZSLUVORSA-N
H01 porphin F1 fragment 'C1=c2ccc([nH]2)=Cc2ccc([nH]2)C=c2ccc([nH]2)=Cc2ccc1[nH]2' InChI=1S/C20H16N4/c1-2-14-10-16-5-6-18(23-16)12-20-8-7-19(24-20)11-17-4-3-15(22-17)9-13(1)21-14/h1-12,21-24H ZKSVMRIKVRPHQK-UHFFFAOYSA-N
H01 porphin-like F2 fragment C1~C~C2~C~C3~C~C~C(~C~C4~C~C~C(~C~C5~C~C~C(~C~C~1~N~2)~N~5)~N~4)~N~3 ? ?
H01 pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
H01 N1 S1 1
H01 C11 S1 1
H01 C12 S1 1
H01 C13 S1 1
H01 C15 S1 1
H01 C14 S1 1
H01 C21 S1 1
H01 C22 S1 1
H01 C23 S1 1
H01 C24 S1 1
H01 C25 S1 1
H01 C33 S1 1
H01 C32 S1 1
H01 C31 S1 1
H01 N3 S1 1
H01 C34 S1 1
H01 C35 S1 1
H01 C41 S1 1
H01 N4 S1 1
H01 C42 S1 1
H01 C43 S1 1
H01 C44 S1 1
H01 C45 S1 1
H01 N2 S1 1
H01 C12 F1 1
H01 C13 F1 1
H01 C14 F1 1
H01 C15 F1 1
H01 C21 F1 1
H01 N2 F1 1
H01 C24 F1 1
H01 C23 F1 1
H01 C22 F1 1
H01 C25 F1 1
H01 C31 F1 1
H01 N3 F1 1
H01 C34 F1 1
H01 C35 F1 1
H01 C41 F1 1
H01 N4 F1 1
H01 C44 F1 1
H01 C45 F1 1
H01 C11 F1 1
H01 N1 F1 1
H01 C43 F1 1
H01 C42 F1 1
H01 C33 F1 1
H01 C32 F1 1
H01 C12 F2 1
H01 C13 F2 1
H01 C14 F2 1
H01 C15 F2 1
H01 C21 F2 1
H01 N2 F2 1
H01 C24 F2 1
H01 C23 F2 1
H01 C22 F2 1
H01 C25 F2 1
H01 C31 F2 1
H01 N3 F2 1
H01 C34 F2 1
H01 C35 F2 1
H01 C41 F2 1
H01 N4 F2 1
H01 C44 F2 1
H01 C45 F2 1
H01 C11 F2 1
H01 N1 F2 1
H01 C43 F2 1
H01 C42 F2 1
H01 C33 F2 1
H01 C32 F2 1
H01 C11 F3 1
H01 C12 F3 1
H01 C13 F3 1
H01 C14 F3 1
H01 N1 F3 1
H01 C21 F3 2
H01 C22 F3 2
H01 C23 F3 2
H01 C24 F3 2
H01 N2 F3 2
H01 C31 F3 3
H01 C32 F3 3
H01 C33 F3 3
H01 C34 F3 3
H01 N3 F3 3
H01 C41 F3 4
H01 C42 F3 4
H01 C43 F3 4
H01 C44 F3 4
H01 N4 F3 4
#
_pdbe_chem_comp_rdkit_properties.comp_id H01
_pdbe_chem_comp_rdkit_properties.exactmw 672.156
_pdbe_chem_comp_rdkit_properties.amw 672.738
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 8
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 46
_pdbe_chem_comp_rdkit_properties.NumAtoms 78
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 16
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.267
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 8
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 307.491
_pdbe_chem_comp_rdkit_properties.tpsa 246.500
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.226
_pdbe_chem_comp_rdkit_properties.CrippenMR 165.342
_pdbe_chem_comp_rdkit_properties.chi0v 23.321
_pdbe_chem_comp_rdkit_properties.chi1v 14.330
_pdbe_chem_comp_rdkit_properties.chi2v 7.521
_pdbe_chem_comp_rdkit_properties.chi3v 7.521
_pdbe_chem_comp_rdkit_properties.chi4v 5.288
_pdbe_chem_comp_rdkit_properties.chi0n 53.688
_pdbe_chem_comp_rdkit_properties.chi1n 26.935
_pdbe_chem_comp_rdkit_properties.chi2n 5.726
_pdbe_chem_comp_rdkit_properties.chi3n 5.726
_pdbe_chem_comp_rdkit_properties.chi4n 3.928
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.640
_pdbe_chem_comp_rdkit_properties.kappa1 11.258
_pdbe_chem_comp_rdkit_properties.kappa2 11.618
_pdbe_chem_comp_rdkit_properties.kappa3 6.110
_pdbe_chem_comp_rdkit_properties.Phi 2.843
#
_pdbe_chem_comp_external_mappings.comp_id H01
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id H01
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
H01 N1 2.510 -0.495 0.543 ETKDGv3 1
H01 C11 2.569 -1.660 1.358 ETKDGv3 2
H01 C12 3.873 -1.708 2.038 ETKDGv3 3
H01 O1 5.422 -2.398 4.140 ETKDGv3 4
H01 O2 3.200 -3.377 4.023 ETKDGv3 5
H01 C13 4.595 -0.651 1.641 ETKDGv3 6
H01 C15 4.088 1.335 0.180 ETKDGv3 7
H01 C14 3.755 0.163 0.743 ETKDGv3 8
H01 C16 2.091 4.550 -3.234 ETKDGv3 9
H01 O3 5.004 -4.268 2.379 ETKDGv3 10
H01 O4 5.868 4.387 -1.579 ETKDGv3 11
H01 C21 3.140 2.138 -0.621 ETKDGv3 12
H01 C22 3.455 2.933 -1.642 ETKDGv3 13
H01 C23 2.221 3.608 -2.073 ETKDGv3 14
H01 C24 1.231 3.142 -1.308 ETKDGv3 15
H01 C25 -0.194 3.531 -1.388 ETKDGv3 16
H01 C26 5.989 -0.319 2.091 ETKDGv3 17
H01 O41 -3.861 1.229 2.455 ETKDGv3 18
H01 C49 -4.871 1.046 1.723 ETKDGv3 19
H01 O42 -5.567 -0.157 1.787 ETKDGv3 20
H01 C48 -5.297 2.104 0.753 ETKDGv3 21
H01 C47 -4.819 1.794 -0.672 ETKDGv3 22
H01 C33 -3.317 1.903 -0.797 ETKDGv3 23
H01 C32 -2.629 3.027 -1.046 ETKDGv3 24
H01 C46 -3.217 4.381 -1.329 ETKDGv3 25
H01 C31 -1.196 2.692 -1.086 ETKDGv3 26
H01 N3 -1.031 1.303 -0.823 ETKDGv3 27
H01 C34 -2.348 0.808 -0.609 ETKDGv3 28
H01 C35 -2.639 -0.469 -0.312 ETKDGv3 29
H01 C41 -1.603 -1.483 -0.022 ETKDGv3 30
H01 N4 -0.356 -1.183 0.594 ETKDGv3 31
H01 C42 -1.724 -2.800 -0.197 ETKDGv3 32
H01 C37 -2.945 -3.523 -0.699 ETKDGv3 33
H01 C38 -3.853 -3.911 0.469 ETKDGv3 34
H01 C39 -5.077 -4.609 -0.031 ETKDGv3 35
H01 O32 -5.059 -5.987 -0.222 ETKDGv3 36
H01 O31 -6.111 -3.947 -0.316 ETKDGv3 37
H01 C43 -0.485 -3.420 0.304 ETKDGv3 38
H01 C36 -0.204 -4.889 0.418 ETKDGv3 39
H01 C44 0.297 -2.437 0.748 ETKDGv3 40
H01 C45 1.613 -2.602 1.401 ETKDGv3 41
H01 S1 4.381 -2.942 3.202 ETKDGv3 42
H01 N2 1.749 2.236 -0.339 ETKDGv3 43
H01 S2 5.058 3.136 -2.355 ETKDGv3 44
H01 O5 5.850 1.864 -2.227 ETKDGv3 45
H01 O6 4.925 3.462 -3.816 ETKDGv3 46
H01 HN1 1.890 -0.362 -0.286 ETKDGv3 47
H01 H15 5.081 1.735 0.325 ETKDGv3 48
H01 H161 1.222 5.227 -3.113 ETKDGv3 49
H01 H162 2.997 5.184 -3.309 ETKDGv3 50
H01 H163 1.971 3.967 -4.170 ETKDGv3 51
H01 HO3 5.764 -3.908 1.855 ETKDGv3 52
H01 HO4 5.921 4.107 -0.630 ETKDGv3 53
H01 H25 -0.429 4.542 -1.689 ETKDGv3 54
H01 H261 6.497 0.344 1.363 ETKDGv3 55
H01 H262 5.952 0.186 3.079 ETKDGv3 56
H01 H263 6.601 -1.241 2.164 ETKDGv3 57
H01 HO42 -5.278 -0.892 2.422 ETKDGv3 58
H01 H481 -6.407 2.157 0.754 ETKDGv3 59
H01 H482 -4.915 3.095 1.080 ETKDGv3 60
H01 H471 -5.303 2.502 -1.377 ETKDGv3 61
H01 H472 -5.162 0.784 -0.977 ETKDGv3 62
H01 H461 -3.347 4.505 -2.424 ETKDGv3 63
H01 H462 -2.548 5.178 -0.946 ETKDGv3 64
H01 H463 -4.198 4.508 -0.827 ETKDGv3 65
H01 HN3 -0.208 0.729 -1.108 ETKDGv3 66
H01 H35 -3.672 -0.780 -0.261 ETKDGv3 67
H01 HN4 -0.113 -0.299 1.092 ETKDGv3 68
H01 H371 -2.636 -4.432 -1.256 ETKDGv3 69
H01 H372 -3.499 -2.879 -1.415 ETKDGv3 70
H01 H381 -3.307 -4.587 1.162 ETKDGv3 71
H01 H382 -4.153 -3.002 1.036 ETKDGv3 72
H01 HO32 -5.875 -6.473 -0.575 ETKDGv3 73
H01 H361 0.867 -5.094 0.206 ETKDGv3 74
H01 H362 -0.810 -5.465 -0.308 ETKDGv3 75
H01 H363 -0.447 -5.233 1.445 ETKDGv3 76
H01 H45 1.804 -3.529 1.923 ETKDGv3 77
H01 HN2 1.259 1.894 0.517 ETKDGv3 78
#