data_H2S
#
_chem_comp.id H2S
_chem_comp.name "HYDROSULFURIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "H2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "HYDROGEN SULFIDE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 34.081
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code H2S
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1YQ9
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H2S S S S 0 1 N N N N N N 27.069 73.339 43.000 -0.051 0.000 0.000 S H2S 1
H2S HS1 1HS H 0 1 N N N N N N 28.369 73.339 43.000 0.813 0.000 -1.030 HS1 H2S 2
H2S HS2 2HS H 0 1 N N N N N N 26.635 73.339 44.225 0.813 0.000 1.030 HS2 H2S 3
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H2S S HS1 SING N N 1
H2S S HS2 SING N N 2
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H2S SMILES_CANONICAL CACTVS 3.341 S
H2S SMILES CACTVS 3.341 S
H2S SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 S
H2S SMILES "OpenEye OEToolkits" 1.5.0 S
H2S InChI InChI 1.03 InChI=1S/H2S/h1H2
H2S InChIKey InChI 1.03 RWSOTUBLDIXVET-UHFFFAOYSA-N
#
_pdbx_chem_comp_identifier.comp_id H2S
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.5.0
_pdbx_chem_comp_identifier.identifier sulfane
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H2S 'Create component' 1999-07-08 EBI
H2S 'Modify descriptor' 2011-06-04 RCSB
H2S 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id H2S
_pdbx_chem_comp_synonyms.name "HYDROGEN SULFIDE"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id H2S
_pdbe_chem_comp_synonyms.name 'HYDROGEN SULFIDE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
_pdbe_chem_comp_atom_depiction.comp_id H2S
_pdbe_chem_comp_atom_depiction.atom_id S
_pdbe_chem_comp_atom_depiction.element S
_pdbe_chem_comp_atom_depiction.model_Cartn_x 3.805
_pdbe_chem_comp_atom_depiction.model_Cartn_y -0.233
_pdbe_chem_comp_atom_depiction.pdbx_ordinal 1
#
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id H2S
_pdbe_chem_comp_rdkit_properties.exactmw 33.988
_pdbe_chem_comp_rdkit_properties.amw 34.083
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 0
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 0
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 1
_pdbe_chem_comp_rdkit_properties.NumAtoms 3
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 16.733
_pdbe_chem_comp_rdkit_properties.tpsa 0
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.113
_pdbe_chem_comp_rdkit_properties.CrippenMR 10.381
_pdbe_chem_comp_rdkit_properties.chi0v 1.225
_pdbe_chem_comp_rdkit_properties.chi1v 0
_pdbe_chem_comp_rdkit_properties.chi2v 0
_pdbe_chem_comp_rdkit_properties.chi3v 0
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 2.408
_pdbe_chem_comp_rdkit_properties.chi1n 0.816
_pdbe_chem_comp_rdkit_properties.chi2n 0
_pdbe_chem_comp_rdkit_properties.chi3n 0
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.350
_pdbe_chem_comp_rdkit_properties.kappa1 0.030
_pdbe_chem_comp_rdkit_properties.kappa2 1.207
_pdbe_chem_comp_rdkit_properties.kappa3 7.779
_pdbe_chem_comp_rdkit_properties.Phi 0.036
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
H2S UniChem ChEMBL CHEMBL1200739
H2S UniChem PDBe H2S
H2S UniChem 'KEGG LIGAND' C00283
H2S UniChem ChEBI 16136
H2S UniChem eMolecules 481062
H2S UniChem fdasrs YY9FVM7NSN
H2S UniChem HMDB HMDB0003276
H2S UniChem 'PubChem TPHARMA' 15194103
H2S UniChem PubChem 18779926
H2S UniChem PubChem 402
H2S UniChem NMRShiftDB 60020602
H2S UniChem ACTor 11144-15-3
H2S UniChem ACTor 7704-34-9
H2S UniChem BindingDb 50147625
H2S UniChem 'EPA CompTox Dashboard' DTXSID4024149
H2S UniChem MetaboLights MTBLC16136
H2S UniChem BRENDA 128304
H2S UniChem BRENDA 47488
H2S UniChem BRENDA 708
H2S UniChem BRENDA 911
H2S UniChem ChemicalBook CB0122872
H2S UniChem ChemicalBook CB0854287
H2S UniChem ChemicalBook CB5855623
H2S UniChem ChemicalBook CB7875542
H2S UniChem 'Probes And Drugs' PD156179
H2S UniChem Nikkaji J644.123H
H2S UniChem SureChEMBL SCHEMBL134
H2S UniChem 'PubChem TPHARMA' 15296835
H2S UniChem ACTor 12673-82-4
H2S UniChem ACTor 13940-21-1
H2S UniChem ACTor 7783-06-4
H2S UniChem Nikkaji J3.750H
H2S UniChem Nikkaji J3.759A
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
H2S S -0.018 0.651 0.000 ETKDGv3 1
H2S HS1 1.022 -0.298 0.000 ETKDGv3 2
H2S HS2 -1.004 -0.353 0.000 ETKDGv3 3
#