data_H6A
#
_chem_comp.id H6A
_chem_comp.name "2-(5-phenyl-4-{(R)-phenyl[2-(piperidin-1-yl)ethoxy]methyl}-1H-pyrazol-1-yl)pyridine-4-carboxylic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H30 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-06-11
_chem_comp.pdbx_modified_date 2019-06-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 482.574
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code H6A
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6DQE
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H6A C02 C1 C 0 1 N N N N N N -23.525 18.300 7.757 5.813 -2.848 -0.790 C02 H6A 1
H6A C04 C2 C 0 1 Y N N N N N -23.592 17.804 6.319 5.054 -1.621 -0.456 C04 H6A 2
H6A C05 C3 C 0 1 Y N N N N N -23.582 16.440 6.078 5.694 -0.513 0.111 C05 H6A 3
H6A C06 C4 C 0 1 Y N N N N N -23.644 15.998 4.770 4.951 0.613 0.408 C06 H6A 4
H6A C08 C5 C 0 1 Y N N N N N -23.720 18.154 3.980 3.011 -0.365 -0.375 C08 H6A 5
H6A C10 C6 C 0 1 Y N N N N N -24.382 20.126 2.605 0.762 0.552 0.039 C10 H6A 6
H6A C11 C7 C 0 1 Y N N N N N -25.213 20.945 3.596 1.089 1.490 1.135 C11 H6A 7
H6A C12 C8 C 0 1 Y N N N N N -24.710 22.156 4.043 1.003 2.867 0.927 C12 H6A 8
H6A C13 C9 C 0 1 Y N N N N N -25.437 22.925 4.935 1.310 3.737 1.954 C13 H6A 9
H6A C14 C10 C 0 1 Y N N N N N -26.671 22.477 5.374 1.702 3.247 3.186 C14 H6A 10
H6A C15 C11 C 0 1 Y N N N N N -27.177 21.268 4.923 1.789 1.882 3.398 C15 H6A 11
H6A C16 C12 C 0 1 Y N N N N N -26.449 20.497 4.028 1.480 1.002 2.382 C16 H6A 12
H6A C18 C13 C 0 1 Y N N N N N -24.114 20.505 1.270 -0.473 0.345 -0.508 C18 H6A 13
H6A C35 C14 C 0 1 Y N N N N N -23.324 19.463 0.746 -0.340 -0.613 -1.514 C35 H6A 14
H6A C37 C15 C 0 1 Y N N N N N -23.654 18.693 5.252 3.682 -1.536 -0.704 C37 H6A 15
H6A N07 N1 N 0 1 Y N N N N N -23.708 16.852 3.767 3.656 0.655 0.165 N07 H6A 16
H6A N09 N2 N 0 1 Y N N N N N -23.770 18.978 2.793 1.639 -0.265 -0.617 N09 H6A 17
H6A N36 N3 N 0 1 Y N N N N N -23.147 18.583 1.690 0.915 -0.978 -1.581 N36 H6A 18
H6A O01 O1 O 0 1 N N N N N N -22.798 17.687 8.581 7.135 -2.910 -0.544 O01 H6A 19
H6A O03 O2 O 0 1 N N N N N N -24.192 19.304 8.110 5.241 -3.800 -1.282 O03 H6A 20
H6A C19 C16 C 0 1 N N R N N N -24.580 21.745 0.503 -1.751 1.031 -0.099 C19 H6A 21
H6A C21 C17 C 0 1 N N N N N N -22.556 22.763 1.084 -3.983 0.355 0.455 C21 H6A 22
H6A C22 C18 C 0 1 N N N N N N -21.784 23.875 0.365 -5.109 -0.585 0.020 C22 H6A 23
H6A C24 C19 C 0 1 N N N N N N -23.207 25.411 -0.793 -5.632 -2.905 -0.431 C24 H6A 24
H6A C25 C20 C 0 1 N N N N N N -23.794 26.820 -0.856 -5.080 -4.331 -0.359 C25 H6A 25
H6A C26 C21 C 0 1 N N N N N N -22.763 27.868 -0.610 -4.853 -4.713 1.106 C26 H6A 26
H6A C27 C22 C 0 1 N N N N N N -22.036 27.628 0.667 -3.894 -3.704 1.745 C27 H6A 27
H6A C28 C23 C 0 1 N N N N N N -21.440 26.222 0.729 -4.480 -2.296 1.613 C28 H6A 28
H6A C29 C24 C 0 1 Y N N N N N -26.105 21.807 0.575 -1.878 2.339 -0.835 C29 H6A 29
H6A C30 C25 C 0 1 Y N N N N N -26.832 20.807 -0.049 -2.253 2.350 -2.166 C30 H6A 30
H6A C31 C26 C 0 1 Y N N N N N -28.214 20.818 -0.008 -2.370 3.550 -2.842 C31 H6A 31
H6A C32 C27 C 0 1 Y N N N N N -28.872 21.831 0.668 -2.111 4.740 -2.187 C32 H6A 32
H6A C33 C28 C 0 1 Y N N N N N -28.146 22.830 1.299 -1.736 4.729 -0.856 C33 H6A 33
H6A C34 C29 C 0 1 Y N N N N N -26.761 22.820 1.255 -1.624 3.529 -0.179 C34 H6A 34
H6A N23 N4 N 0 1 N N N N N N -22.452 25.160 0.465 -4.678 -1.979 0.193 N23 H6A 35
H6A O20 O3 O 0 1 N N N N N N -23.937 22.920 0.907 -2.864 0.194 -0.419 O20 H6A 36
H6A H1 H1 H 0 1 N N N N N N -23.527 15.736 6.895 6.754 -0.538 0.315 H1 H6A 37
H6A H2 H2 H 0 1 N N N N N N -23.640 14.937 4.566 5.438 1.471 0.846 H2 H6A 38
H6A H3 H3 H 0 1 N N N N N N -23.748 22.501 3.694 0.698 3.252 -0.035 H3 H6A 39
H6A H4 H4 H 0 1 N N N N N N -25.044 23.868 5.286 1.244 4.803 1.794 H4 H6A 40
H6A H5 H5 H 0 1 N N N N N N -27.242 23.072 6.071 1.941 3.932 3.986 H5 H6A 41
H6A H6 H6 H 0 1 N N N N N N -28.141 20.925 5.269 2.097 1.506 4.363 H6 H6A 42
H6A H7 H7 H 0 1 N N N N N N -26.843 19.557 3.672 1.544 -0.063 2.550 H7 H6A 43
H6A H8 H8 H 0 1 N N N N N N -22.934 19.404 -0.260 -1.140 -0.991 -2.133 H8 H6A 44
H6A H9 H9 H 0 1 N N N N N N -23.651 19.761 5.410 3.152 -2.368 -1.145 H9 H6A 45
H6A H10 H10 H 0 1 N N N N N N -22.860 18.106 9.431 7.587 -3.733 -0.775 H10 H6A 46
H6A H11 H11 H 0 1 N N N N N N -24.327 21.568 -0.553 -1.735 1.219 0.975 H11 H6A 47
H6A H12 H12 H 0 1 N N N N N N -22.249 21.789 0.676 -4.333 1.386 0.412 H12 H6A 48
H6A H13 H13 H 0 1 N N N N N N -22.324 22.800 2.159 -3.684 0.115 1.476 H13 H6A 49
H6A H14 H14 H 0 1 N N N N N N -21.686 23.608 -0.698 -5.993 -0.400 0.631 H14 H6A 50
H6A H15 H15 H 0 1 N N N N N N -20.784 23.960 0.815 -5.348 -0.405 -1.028 H15 H6A 51
H6A H16 H16 H 0 1 N N N N N N -24.029 24.684 -0.861 -5.781 -2.626 -1.473 H16 H6A 52
H6A H17 H17 H 0 1 N N N N N N -22.526 25.275 -1.646 -6.584 -2.857 0.098 H17 H6A 53
H6A H18 H18 H 0 1 N N N N N N -24.230 26.978 -1.853 -5.795 -5.021 -0.808 H18 H6A 54
H6A H19 H19 H 0 1 N N N N N N -24.581 26.911 -0.093 -4.135 -4.383 -0.900 H19 H6A 55
H6A H20 H20 H 0 1 N N N N N N -22.041 27.861 -1.440 -5.804 -4.698 1.638 H20 H6A 56
H6A H21 H21 H 0 1 N N N N N N -23.256 28.850 -0.562 -4.420 -5.711 1.160 H21 H6A 57
H6A H22 H22 H 0 1 N N N N N N -21.223 28.363 0.757 -3.762 -3.945 2.800 H22 H6A 58
H6A H23 H23 H 0 1 N N N N N N -22.738 27.754 1.505 -2.931 -3.746 1.238 H23 H6A 59
H6A H24 H24 H 0 1 N N N N N N -21.015 26.063 1.731 -5.437 -2.251 2.132 H24 H6A 60
H6A H25 H25 H 0 1 N N N N N N -20.642 26.144 -0.024 -3.793 -1.574 2.054 H25 H6A 61
H6A H26 H26 H 0 1 N N N N N N -26.317 20.014 -0.571 -2.455 1.420 -2.677 H26 H6A 62
H6A H27 H27 H 0 1 N N N N N N -28.778 20.040 -0.501 -2.662 3.558 -3.881 H27 H6A 63
H6A H28 H28 H 0 1 N N N N N N -29.951 21.843 0.704 -2.201 5.677 -2.715 H28 H6A 64
H6A H29 H29 H 0 1 N N N N N N -28.662 23.619 1.827 -1.534 5.659 -0.345 H29 H6A 65
H6A H30 H30 H 0 1 N N N N N N -26.196 23.597 1.748 -1.335 3.521 0.861 H30 H6A 66
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H6A C25 C24 SING N N 1
H6A C25 C26 SING N N 2
H6A C24 N23 SING N N 3
H6A C26 C27 SING N N 4
H6A C30 C31 DOUB Y N 5
H6A C30 C29 SING Y N 6
H6A C31 C32 SING Y N 7
H6A C22 N23 SING N N 8
H6A C22 C21 SING N N 9
H6A N23 C28 SING N N 10
H6A C19 C29 SING N N 11
H6A C19 O20 SING N N 12
H6A C19 C18 SING N N 13
H6A C29 C34 DOUB Y N 14
H6A C27 C28 SING N N 15
H6A C32 C33 DOUB Y N 16
H6A C35 C18 SING Y N 17
H6A C35 N36 DOUB Y N 18
H6A O20 C21 SING N N 19
H6A C34 C33 SING Y N 20
H6A C18 C10 DOUB Y N 21
H6A N36 N09 SING Y N 22
H6A C10 N09 SING Y N 23
H6A C10 C11 SING N N 24
H6A N09 C08 SING N N 25
H6A C11 C16 DOUB Y N 26
H6A C11 C12 SING Y N 27
H6A N07 C08 DOUB Y N 28
H6A N07 C06 SING Y N 29
H6A C08 C37 SING Y N 30
H6A C16 C15 SING Y N 31
H6A C12 C13 DOUB Y N 32
H6A C06 C05 DOUB Y N 33
H6A C15 C14 DOUB Y N 34
H6A C13 C14 SING Y N 35
H6A C37 C04 DOUB Y N 36
H6A C05 C04 SING Y N 37
H6A C04 C02 SING N N 38
H6A C02 O03 DOUB N N 39
H6A C02 O01 SING N N 40
H6A C05 H1 SING N N 41
H6A C06 H2 SING N N 42
H6A C12 H3 SING N N 43
H6A C13 H4 SING N N 44
H6A C14 H5 SING N N 45
H6A C15 H6 SING N N 46
H6A C16 H7 SING N N 47
H6A C35 H8 SING N N 48
H6A C37 H9 SING N N 49
H6A O01 H10 SING N N 50
H6A C19 H11 SING N N 51
H6A C21 H12 SING N N 52
H6A C21 H13 SING N N 53
H6A C22 H14 SING N N 54
H6A C22 H15 SING N N 55
H6A C24 H16 SING N N 56
H6A C24 H17 SING N N 57
H6A C25 H18 SING N N 58
H6A C25 H19 SING N N 59
H6A C26 H20 SING N N 60
H6A C26 H21 SING N N 61
H6A C27 H22 SING N N 62
H6A C27 H23 SING N N 63
H6A C28 H24 SING N N 64
H6A C28 H25 SING N N 65
H6A C30 H26 SING N N 66
H6A C31 H27 SING N N 67
H6A C32 H28 SING N N 68
H6A C33 H29 SING N N 69
H6A C34 H30 SING N N 70
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H6A SMILES ACDLabs 12.01 C(=O)(O)c1ccnc(c1)n3c(c2ccccc2)c(cn3)C(c4ccccc4)OCCN5CCCCC5
H6A InChI InChI 1.03 InChI=1S/C29H30N4O3/c34-29(35)24-14-15-30-26(20-24)33-27(22-10-4-1-5-11-22)25(21-31-33)28(23-12-6-2-7-13-23)36-19-18-32-16-8-3-9-17-32/h1-2,4-7,10-15,20-21,28H,3,8-9,16-19H2,(H,34,35)/t28-/m1/s1
H6A InChIKey InChI 1.03 HAJRSCRWEDXEKU-MUUNZHRXSA-N
H6A SMILES_CANONICAL CACTVS 3.385 OC(=O)c1ccnc(c1)n2ncc([C@H](OCCN3CCCCC3)c4ccccc4)c2c5ccccc5
H6A SMILES CACTVS 3.385 OC(=O)c1ccnc(c1)n2ncc([CH](OCCN3CCCCC3)c4ccccc4)c2c5ccccc5
H6A SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1ccc(cc1)c2c(cnn2c3cc(ccn3)C(=O)O)[C@@H](c4ccccc4)OCCN5CCCCC5
H6A SMILES "OpenEye OEToolkits" 2.0.6 c1ccc(cc1)c2c(cnn2c3cc(ccn3)C(=O)O)C(c4ccccc4)OCCN5CCCCC5
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
H6A "SYSTEMATIC NAME" ACDLabs 12.01 "2-(5-phenyl-4-{(R)-phenyl[2-(piperidin-1-yl)ethoxy]methyl}-1H-pyrazol-1-yl)pyridine-4-carboxylic acid"
H6A "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[5-phenyl-4-[(~{R})-phenyl(2-piperidin-1-ylethoxy)methyl]pyrazol-1-yl]pyridine-4-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H6A 'Create component' 2018-06-11 RCSB
H6A 'Initial release' 2019-06-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
H6A C02 C 4.299 5.377 1
H6A C04 C 5.598 4.627 2
H6A C05 C 6.897 5.377 3
H6A C06 C 8.196 4.627 4
H6A C08 C 6.897 2.377 5
H6A C10 C 8.111 -0.005 6
H6A C11 C 9.537 0.459 7
H6A C12 C 10.652 -0.545 8
H6A C13 C 12.079 -0.081 9
H6A C14 C 12.390 1.386 10
H6A C15 C 11.276 2.390 11
H6A C16 C 9.849 1.926 12
H6A C18 C 7.647 -1.431 13
H6A C35 C 6.147 -1.431 14
H6A C37 C 5.598 3.127 15
H6A N07 N 8.196 3.127 16
H6A N09 N 6.897 0.877 17
H6A N36 N 5.684 -0.005 18
H6A O01 O 3.000 4.627 19
H6A O03 O 4.299 6.877 20
H6A C19 C 8.529 -2.645 21
H6A C21 C 10.902 -3.701 22
H6A C22 C 12.394 -3.545 23
H6A C24 C 12.665 -6.129 24
H6A C25 C 13.547 -7.342 25
H6A C26 C 15.039 -7.185 26
H6A C27 C 15.649 -5.815 27
H6A C28 C 14.768 -4.601 28
H6A C29 C 7.919 -4.015 29
H6A C30 C 8.800 -5.229 30
H6A C31 C 8.190 -6.599 31
H6A C32 C 6.698 -6.756 32
H6A C33 C 5.817 -5.542 33
H6A C34 C 6.427 -4.172 34
H6A N23 N 13.276 -4.758 35
H6A O20 O 10.021 -2.488 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
H6A C25 C24 SINGLE NONE 1
H6A C25 C26 SINGLE NONE 2
H6A C24 N23 SINGLE NONE 3
H6A C26 C27 SINGLE NONE 4
H6A C30 C31 DOUBLE NONE 5
H6A C30 C29 SINGLE NONE 6
H6A C31 C32 SINGLE NONE 7
H6A C22 N23 SINGLE NONE 8
H6A C22 C21 SINGLE NONE 9
H6A N23 C28 SINGLE NONE 10
H6A C19 C29 SINGLE NONE 11
H6A C19 O20 SINGLE BEGINDASH 12
H6A C19 C18 SINGLE NONE 13
H6A C29 C34 DOUBLE NONE 14
H6A C27 C28 SINGLE NONE 15
H6A C32 C33 DOUBLE NONE 16
H6A C35 C18 SINGLE NONE 17
H6A C35 N36 DOUBLE NONE 18
H6A O20 C21 SINGLE NONE 19
H6A C34 C33 SINGLE NONE 20
H6A C18 C10 DOUBLE NONE 21
H6A N36 N09 SINGLE NONE 22
H6A C10 N09 SINGLE NONE 23
H6A C10 C11 SINGLE NONE 24
H6A N09 C08 SINGLE NONE 25
H6A C11 C16 SINGLE NONE 26
H6A C11 C12 DOUBLE NONE 27
H6A N07 C08 DOUBLE NONE 28
H6A N07 C06 SINGLE NONE 29
H6A C08 C37 SINGLE NONE 30
H6A C16 C15 DOUBLE NONE 31
H6A C12 C13 SINGLE NONE 32
H6A C06 C05 DOUBLE NONE 33
H6A C15 C14 SINGLE NONE 34
H6A C13 C14 DOUBLE NONE 35
H6A C37 C04 DOUBLE NONE 36
H6A C05 C04 SINGLE NONE 37
H6A C04 C02 SINGLE NONE 38
H6A C02 O03 DOUBLE NONE 39
H6A C02 O01 SINGLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
H6A MurckoScaffold S1 scaffold 'c1ccc(-c2c([C@H](OCCN3CCCCC3)c3ccccc3)cnn2-c2ccccn2)cc1' InChI=1S/C28H30N4O/c1-4-12-23(13-5-1)27-25(22-30-32(27)26-16-8-9-17-29-26)28(24-14-6-2-7-15-24)33-21-20-31-18-10-3-11-19-31/h1-2,4-9,12-17,22,28H,3,10-11,18-21H2/t28-/m1/s1 DUZHNBPBYWREEN-MUUNZHRXSA-N
H6A phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
H6A pyrazole F2 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
H6A pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
H6A Z826535920 F4 fragment Cc1ccnn1-c1ccccn1 InChI=1S/C9H9N3/c1-8-5-7-11-12(8)9-4-2-3-6-10-9/h2-7H,1H3 COTNQJPITRTSCQ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
H6A C04 S1 1
H6A C05 S1 1
H6A C06 S1 1
H6A C08 S1 1
H6A C10 S1 1
H6A C11 S1 1
H6A C12 S1 1
H6A C13 S1 1
H6A C14 S1 1
H6A C15 S1 1
H6A C16 S1 1
H6A C18 S1 1
H6A C35 S1 1
H6A C37 S1 1
H6A N07 S1 1
H6A N09 S1 1
H6A N36 S1 1
H6A C19 S1 1
H6A C21 S1 1
H6A C22 S1 1
H6A C24 S1 1
H6A C25 S1 1
H6A C26 S1 1
H6A C27 S1 1
H6A C28 S1 1
H6A C29 S1 1
H6A C30 S1 1
H6A C31 S1 1
H6A C32 S1 1
H6A C33 S1 1
H6A C34 S1 1
H6A N23 S1 1
H6A O20 S1 1
H6A C11 F1 1
H6A C16 F1 1
H6A C15 F1 1
H6A C14 F1 1
H6A C13 F1 1
H6A C12 F1 1
H6A C29 F1 2
H6A C30 F1 2
H6A C31 F1 2
H6A C32 F1 2
H6A C33 F1 2
H6A C34 F1 2
H6A C10 F2 1
H6A C18 F2 1
H6A C35 F2 1
H6A N36 F2 1
H6A N09 F2 1
H6A C06 F3 1
H6A C05 F3 1
H6A C04 F3 1
H6A C37 F3 1
H6A C08 F3 1
H6A N07 F3 1
H6A C11 F4 1
H6A C10 F4 1
H6A C18 F4 1
H6A C35 F4 1
H6A N36 F4 1
H6A N09 F4 1
H6A C08 F4 1
H6A C37 F4 1
H6A C04 F4 1
H6A C05 F4 1
H6A C06 F4 1
H6A N07 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id H6A
_pdbe_chem_comp_rdkit_properties.exactmw 482.232
_pdbe_chem_comp_rdkit_properties.amw 482.584
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 66
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.276
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 252.773
_pdbe_chem_comp_rdkit_properties.tpsa 80.480
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.490
_pdbe_chem_comp_rdkit_properties.CrippenMR 135.501
_pdbe_chem_comp_rdkit_properties.chi0v 17.514
_pdbe_chem_comp_rdkit_properties.chi1v 9.555
_pdbe_chem_comp_rdkit_properties.chi2v 4.157
_pdbe_chem_comp_rdkit_properties.chi3v 4.157
_pdbe_chem_comp_rdkit_properties.chi4v 2.723
_pdbe_chem_comp_rdkit_properties.chi0n 47.514
_pdbe_chem_comp_rdkit_properties.chi1n 24.464
_pdbe_chem_comp_rdkit_properties.chi2n 4.157
_pdbe_chem_comp_rdkit_properties.chi3n 4.157
_pdbe_chem_comp_rdkit_properties.chi4n 2.723
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.810
_pdbe_chem_comp_rdkit_properties.kappa1 7.148
_pdbe_chem_comp_rdkit_properties.kappa2 11.285
_pdbe_chem_comp_rdkit_properties.kappa3 5.373
_pdbe_chem_comp_rdkit_properties.Phi 2.241
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
H6A UniChem PDBe H6A
H6A UniChem PubChem 138393321
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
H6A C02 -5.729 3.088 1.344 ETKDGv3 1
H6A C04 -5.411 2.400 0.074 ETKDGv3 2
H6A C05 -6.460 2.236 -0.960 ETKDGv3 3
H6A C06 -6.161 1.633 -2.116 ETKDGv3 4
H6A C08 -3.893 1.233 -1.453 ETKDGv3 5
H6A C10 -1.589 0.239 -0.841 ETKDGv3 6
H6A C11 -1.818 -0.078 0.582 ETKDGv3 7
H6A C12 -1.023 0.433 1.539 ETKDGv3 8
H6A C13 -1.263 0.100 2.958 ETKDGv3 9
H6A C14 -2.276 -0.707 3.296 ETKDGv3 10
H6A C15 -3.159 -1.263 2.250 ETKDGv3 11
H6A C16 -2.944 -0.964 0.963 ETKDGv3 12
H6A C18 -0.526 -0.137 -1.556 ETKDGv3 13
H6A C35 -0.889 0.097 -2.959 ETKDGv3 14
H6A C37 -4.176 1.925 -0.172 ETKDGv3 15
H6A N07 -4.836 1.129 -2.346 ETKDGv3 16
H6A N09 -2.589 0.708 -1.744 ETKDGv3 17
H6A N36 -2.085 0.579 -3.041 ETKDGv3 18
H6A O01 -7.009 3.590 1.563 ETKDGv3 19
H6A O03 -4.850 3.226 2.239 ETKDGv3 20
H6A C19 0.656 -0.938 -1.073 ETKDGv3 21
H6A C21 2.964 -1.066 -1.444 ETKDGv3 22
H6A C22 3.583 0.280 -1.053 ETKDGv3 23
H6A C24 4.817 -0.174 1.044 ETKDGv3 24
H6A C25 4.532 1.103 1.856 ETKDGv3 25
H6A C26 5.520 2.215 1.506 ETKDGv3 26
H6A C27 5.554 2.448 -0.004 ETKDGv3 27
H6A C28 5.874 1.138 -0.736 ETKDGv3 28
H6A C29 0.239 -2.377 -0.851 ETKDGv3 29
H6A C30 0.127 -2.907 0.532 ETKDGv3 30
H6A C31 -0.278 -4.165 0.743 ETKDGv3 31
H6A C32 -0.610 -5.037 -0.401 ETKDGv3 32
H6A C33 -0.508 -4.570 -1.651 ETKDGv3 33
H6A C34 -0.067 -3.180 -1.888 ETKDGv3 34
H6A N23 4.902 0.071 -0.416 ETKDGv3 35
H6A O20 1.694 -0.867 -2.039 ETKDGv3 36
H6A H1 -7.463 2.607 -0.796 ETKDGv3 37
H6A H2 -6.919 1.517 -2.880 ETKDGv3 38
H6A H3 -0.207 1.098 1.284 ETKDGv3 39
H6A H4 -0.616 0.510 3.723 ETKDGv3 40
H6A H5 -2.453 -0.952 4.335 ETKDGv3 41
H6A H6 -3.978 -1.913 2.527 ETKDGv3 42
H6A H7 -3.591 -1.379 0.200 ETKDGv3 43
H6A H8 -0.276 -0.125 -3.823 ETKDGv3 44
H6A H9 -3.381 2.070 0.547 ETKDGv3 45
H6A H10 -7.242 4.063 2.428 ETKDGv3 46
H6A H11 0.979 -0.487 -0.108 ETKDGv3 47
H6A H12 3.623 -1.545 -2.199 ETKDGv3 48
H6A H13 2.930 -1.765 -0.578 ETKDGv3 49
H6A H14 2.893 0.840 -0.390 ETKDGv3 50
H6A H15 3.679 0.879 -1.987 ETKDGv3 51
H6A H16 4.033 -0.928 1.269 ETKDGv3 52
H6A H17 5.779 -0.612 1.389 ETKDGv3 53
H6A H18 3.494 1.455 1.681 ETKDGv3 54
H6A H19 4.618 0.870 2.940 ETKDGv3 55
H6A H20 6.536 1.937 1.864 ETKDGv3 56
H6A H21 5.219 3.154 2.019 ETKDGv3 57
H6A H22 4.576 2.849 -0.348 ETKDGv3 58
H6A H23 6.336 3.202 -0.241 ETKDGv3 59
H6A H24 6.894 0.799 -0.449 ETKDGv3 60
H6A H25 5.907 1.320 -1.832 ETKDGv3 61
H6A H26 0.368 -2.277 1.379 ETKDGv3 62
H6A H27 -0.363 -4.546 1.752 ETKDGv3 63
H6A H28 -0.936 -6.054 -0.226 ETKDGv3 64
H6A H29 -0.751 -5.208 -2.491 ETKDGv3 65
H6A H30 -0.003 -2.817 -2.907 ETKDGv3 66
#