data_HEW
#
_chem_comp.id HEW
_chem_comp.name 4-bromanylpyridin-2-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C5 H5 Br N2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-12-04
_chem_comp.pdbx_modified_date 2019-03-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 173.011
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code HEW
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6Q3F
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HEW C4 C1 C 0 1 Y N N N N N -12.425 -4.430 -9.819 0.399 1.511 -0.000 C4 HEW 1
HEW C5 C2 C 0 1 Y N N N N N -13.167 -4.784 -8.726 1.758 1.750 -0.000 C5 HEW 2
HEW N1 N1 N 0 1 N N N N N N -11.438 -3.229 -5.976 3.169 -1.530 -0.000 N1 HEW 3
HEW N2 N2 N 0 1 Y N N N N N -12.871 -4.366 -7.471 2.622 0.752 0.000 N2 HEW 4
HEW C3 C3 C 0 1 Y N N N N N -11.318 -3.630 -9.626 -0.060 0.199 -0.000 C3 HEW 5
HEW C1 C4 C 0 1 Y N N N N N -11.730 -3.597 -7.256 2.224 -0.511 0.000 C1 HEW 6
HEW C2 C5 C 0 1 Y N N N N N -10.939 -3.211 -8.357 0.870 -0.826 -0.000 C2 HEW 7
HEW BR1 BR1 BR 0 0 N N N N N N -10.293 -3.160 -11.143 -1.914 -0.176 0.000 BR1 HEW 8
HEW H1 H1 H 0 1 N N N N N N -12.699 -4.768 -10.808 -0.300 2.334 0.004 H1 HEW 9
HEW H2 H2 H 0 1 N N N N N N -14.025 -5.424 -8.869 2.120 2.768 -0.000 H2 HEW 10
HEW H3 H3 H 0 1 N N N N N N -12.134 -3.593 -5.357 4.115 -1.315 -0.000 H3 HEW 11
HEW H4 H4 H 0 1 N N N N N N -10.542 -3.593 -5.721 2.882 -2.457 -0.000 H4 HEW 12
HEW H5 H5 H 0 1 N N N N N N -10.058 -2.603 -8.217 0.548 -1.857 0.000 H5 HEW 13
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HEW BR1 C3 SING N N 1
HEW C4 C3 DOUB Y N 2
HEW C4 C5 SING Y N 3
HEW C3 C2 SING Y N 4
HEW C5 N2 DOUB Y N 5
HEW C2 C1 DOUB Y N 6
HEW N2 C1 SING Y N 7
HEW C1 N1 SING N N 8
HEW C4 H1 SING N N 9
HEW C5 H2 SING N N 10
HEW N1 H3 SING N N 11
HEW N1 H4 SING N N 12
HEW C2 H5 SING N N 13
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HEW InChI InChI 1.03 InChI=1S/C5H5BrN2/c6-4-1-2-8-5(7)3-4/h1-3H,(H2,7,8)
HEW InChIKey InChI 1.03 BAQKUNMKVAPWGU-UHFFFAOYSA-N
HEW SMILES_CANONICAL CACTVS 3.385 Nc1cc(Br)ccn1
HEW SMILES CACTVS 3.385 Nc1cc(Br)ccn1
HEW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cnc(cc1Br)N
HEW SMILES "OpenEye OEToolkits" 2.0.6 c1cnc(cc1Br)N
#
_pdbx_chem_comp_identifier.comp_id HEW
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier 4-bromanylpyridin-2-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HEW 'Create component' 2018-12-04 EBI
HEW 'Initial release' 2019-03-20 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
HEW C4 C 6.404 -1.785 1
HEW C5 C 7.702 -1.035 2
HEW N1 N 6.404 2.715 3
HEW N2 N 7.702 0.465 4
HEW C3 C 5.104 -1.035 5
HEW C1 C 6.404 1.215 6
HEW C2 C 5.104 0.465 7
HEW BR1 Br 3.805 -1.785 8
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
HEW BR1 C3 SINGLE NONE 1
HEW C4 C3 DOUBLE NONE 2
HEW C4 C5 SINGLE NONE 3
HEW C3 C2 SINGLE NONE 4
HEW C5 N2 DOUBLE NONE 5
HEW C2 C1 DOUBLE NONE 6
HEW N2 C1 SINGLE NONE 7
HEW C1 N1 SINGLE NONE 8
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
HEW MurckoScaffold S1 scaffold c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
HEW pyridine F1 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
HEW C4 S1 1
HEW C5 S1 1
HEW N2 S1 1
HEW C3 S1 1
HEW C1 S1 1
HEW C2 S1 1
HEW C5 F1 1
HEW C4 F1 1
HEW C3 F1 1
HEW C2 F1 1
HEW C1 F1 1
HEW N2 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id HEW
_pdbe_chem_comp_rdkit_properties.exactmw 171.964
_pdbe_chem_comp_rdkit_properties.amw 173.013
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 1
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 8
_pdbe_chem_comp_rdkit_properties.NumAtoms 13
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 62.999
_pdbe_chem_comp_rdkit_properties.tpsa 38.910
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.046
_pdbe_chem_comp_rdkit_properties.CrippenMR 35.525
_pdbe_chem_comp_rdkit_properties.chi0v 5.358
_pdbe_chem_comp_rdkit_properties.chi1v 2.653
_pdbe_chem_comp_rdkit_properties.chi2v 0.945
_pdbe_chem_comp_rdkit_properties.chi3v 0.945
_pdbe_chem_comp_rdkit_properties.chi4v 0.553
_pdbe_chem_comp_rdkit_properties.chi0n 8.772
_pdbe_chem_comp_rdkit_properties.chi1n 4.254
_pdbe_chem_comp_rdkit_properties.chi2n 0.549
_pdbe_chem_comp_rdkit_properties.chi3n 0.549
_pdbe_chem_comp_rdkit_properties.chi4n 0.287
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.570
_pdbe_chem_comp_rdkit_properties.kappa1 1.988
_pdbe_chem_comp_rdkit_properties.kappa2 2.132
_pdbe_chem_comp_rdkit_properties.kappa3 1.198
_pdbe_chem_comp_rdkit_properties.Phi 0.530
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
HEW UniChem PDBe HEW
HEW UniChem ZINC ZINC000019862889
HEW UniChem 'EPA CompTox Dashboard' DTXSID80351204
HEW UniChem ChemicalBook CB31081300
HEW UniChem ChemicalBook CB6337719
HEW UniChem Nikkaji J2.849.607I
HEW UniChem eMolecules 830494
HEW UniChem SureChEMBL SCHEMBL246592
HEW UniChem 'PubChem TPHARMA' 99244483
HEW UniChem PubChem 693282
HEW UniChem Mcule MCULE-3512913518
HEW UniChem ACTor 84249-14-9
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
HEW C4 1.765 0.490 0.067 ETKDGv3 1
HEW C5 0.814 1.588 -0.191 ETKDGv3 2
HEW N1 -2.399 -0.202 -0.166 ETKDGv3 3
HEW N2 -0.463 1.344 -0.257 ETKDGv3 4
HEW C3 1.300 -0.753 0.231 ETKDGv3 5
HEW C1 -0.990 0.015 -0.085 ETKDGv3 6
HEW C2 -0.153 -1.008 0.151 ETKDGv3 7
HEW BR1 2.503 -2.198 0.566 ETKDGv3 8
HEW H1 2.827 0.695 0.121 ETKDGv3 9
HEW H2 1.177 2.598 -0.325 ETKDGv3 10
HEW H3 -2.809 -1.155 -0.045 ETKDGv3 11
HEW H4 -3.041 0.601 -0.350 ETKDGv3 12
HEW H5 -0.531 -2.014 0.284 ETKDGv3 13
#