data_HFO
#
_chem_comp.id HFO
_chem_comp.name 1-[3,4-bis(oxidanyl)phenyl]ethanone
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H8 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-12-24
_chem_comp.pdbx_modified_date 2021-10-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 152.147
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code HFO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7DQJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HFO C1 C1 C 0 1 Y N N N N N 27.452 20.794 20.343 1.808 -0.561 0.024 C1 HFO 1
HFO C2 C2 C 0 1 Y N N N N N 27.030 19.601 19.744 1.340 0.753 0.027 C2 HFO 2
HFO C3 C3 C 0 1 Y N N N N N 25.703 19.443 19.367 -0.017 1.003 0.017 C3 HFO 3
HFO C4 C4 C 0 1 Y N N N N N 24.782 20.472 19.585 -0.922 -0.066 0.004 C4 HFO 4
HFO C5 C5 C 0 1 Y N N N N N 25.220 21.667 20.154 -0.444 -1.382 0.002 C5 HFO 5
HFO C6 C6 C 0 1 Y N N N N N 26.541 21.826 20.530 0.911 -1.622 0.012 C6 HFO 6
HFO O7 O1 O 0 1 N N N N N N 28.742 20.908 20.757 3.144 -0.804 0.029 O7 HFO 7
HFO O8 O2 O 0 1 N N N N N N 27.942 18.617 19.525 2.222 1.788 0.039 O8 HFO 8
HFO C9 C7 C 0 1 N N N N N N 23.327 20.259 19.319 -2.368 0.193 -0.006 C9 HFO 9
HFO O10 O3 O 0 1 N N N N N N 22.538 21.191 19.411 -2.780 1.334 -0.003 O10 HFO 10
HFO C11 C8 C 0 1 N N N N N N 22.842 18.906 18.909 -3.339 -0.959 -0.019 C11 HFO 11
HFO H1 H1 H 0 1 N N N N N N 25.381 18.522 18.904 -0.381 2.020 0.019 H1 HFO 12
HFO H2 H2 H 0 1 N N N N N N 24.521 22.476 20.303 -1.139 -2.209 -0.008 H2 HFO 13
HFO H3 H3 H 0 1 N N N N N N 26.866 22.757 20.971 1.279 -2.638 0.005 H3 HFO 14
HFO H4 H4 H 0 1 N N N N N N 28.877 21.767 21.140 3.535 -0.867 -0.853 H4 HFO 15
HFO H5 H5 H 0 1 N N N N N N 28.792 18.896 19.844 2.484 2.092 -0.841 H5 HFO 16
HFO H6 H6 H 0 1 N N N N N N 21.757 18.943 18.734 -4.359 -0.574 -0.025 H6 HFO 17
HFO H7 H7 H 0 1 N N N N N N 23.352 18.598 17.984 -3.174 -1.564 -0.911 H7 HFO 18
HFO H8 H8 H 0 1 N N N N N N 23.060 18.181 19.707 -3.188 -1.573 0.869 H8 HFO 19
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HFO C11 C9 SING N N 1
HFO C9 O10 DOUB N N 2
HFO C9 C4 SING N N 3
HFO C3 C4 DOUB Y N 4
HFO C3 C2 SING Y N 5
HFO O8 C2 SING N N 6
HFO C4 C5 SING Y N 7
HFO C2 C1 DOUB Y N 8
HFO C5 C6 DOUB Y N 9
HFO C1 C6 SING Y N 10
HFO C1 O7 SING N N 11
HFO C3 H1 SING N N 12
HFO C5 H2 SING N N 13
HFO C6 H3 SING N N 14
HFO O7 H4 SING N N 15
HFO O8 H5 SING N N 16
HFO C11 H6 SING N N 17
HFO C11 H7 SING N N 18
HFO C11 H8 SING N N 19
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HFO InChI InChI 1.03 InChI=1S/C8H8O3/c1-5(9)6-2-3-7(10)8(11)4-6/h2-4,10-11H,1H3
HFO InChIKey InChI 1.03 UCQUAMAQHHEXGD-UHFFFAOYSA-N
HFO SMILES_CANONICAL CACTVS 3.385 CC(=O)c1ccc(O)c(O)c1
HFO SMILES CACTVS 3.385 CC(=O)c1ccc(O)c(O)c1
HFO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC(=O)c1ccc(c(c1)O)O
HFO SMILES "OpenEye OEToolkits" 2.0.7 CC(=O)c1ccc(c(c1)O)O
#
_pdbx_chem_comp_identifier.comp_id HFO
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier 1-[3,4-bis(oxidanyl)phenyl]ethanone
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HFO 'Create component' 2020-12-24 PDBJ
HFO 'Initial release' 2021-10-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
HFO C1 C 5.104 0.517 1
HFO C2 C 6.404 1.268 2
HFO C3 C 7.702 0.517 3
HFO C4 C 7.702 -0.983 4
HFO C5 C 6.404 -1.732 5
HFO C6 C 5.104 -0.983 6
HFO O7 O 3.805 1.268 7
HFO O8 O 6.404 2.768 8
HFO C9 C 9.002 -1.732 9
HFO O10 O 9.002 -3.232 10
HFO C11 C 10.301 -0.983 11
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
HFO C11 C9 SINGLE NONE 1
HFO C9 O10 DOUBLE NONE 2
HFO C9 C4 SINGLE NONE 3
HFO C3 C4 DOUBLE NONE 4
HFO C3 C2 SINGLE NONE 5
HFO O8 C2 SINGLE NONE 6
HFO C4 C5 SINGLE NONE 7
HFO C2 C1 DOUBLE NONE 8
HFO C5 C6 DOUBLE NONE 9
HFO C1 C6 SINGLE NONE 10
HFO C1 O7 SINGLE NONE 11
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
HFO MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
HFO phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
HFO C1 S1 1
HFO C2 S1 1
HFO C3 S1 1
HFO C4 S1 1
HFO C5 S1 1
HFO C6 S1 1
HFO C1 F1 1
HFO C2 F1 1
HFO C3 F1 1
HFO C4 F1 1
HFO C5 F1 1
HFO C6 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id HFO
_pdbe_chem_comp_rdkit_properties.exactmw 152.047
_pdbe_chem_comp_rdkit_properties.amw 152.149
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 11
_pdbe_chem_comp_rdkit_properties.NumAtoms 19
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.125
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 75.324
_pdbe_chem_comp_rdkit_properties.tpsa 57.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.321
_pdbe_chem_comp_rdkit_properties.CrippenMR 38.290
_pdbe_chem_comp_rdkit_properties.chi0v 5.225
_pdbe_chem_comp_rdkit_properties.chi1v 2.612
_pdbe_chem_comp_rdkit_properties.chi2v 0.973
_pdbe_chem_comp_rdkit_properties.chi3v 0.973
_pdbe_chem_comp_rdkit_properties.chi4v 0.491
_pdbe_chem_comp_rdkit_properties.chi0n 13.225
_pdbe_chem_comp_rdkit_properties.chi1n 6.429
_pdbe_chem_comp_rdkit_properties.chi2n 0.973
_pdbe_chem_comp_rdkit_properties.chi3n 0.973
_pdbe_chem_comp_rdkit_properties.chi4n 0.491
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.510
_pdbe_chem_comp_rdkit_properties.kappa1 2.236
_pdbe_chem_comp_rdkit_properties.kappa2 2.617
_pdbe_chem_comp_rdkit_properties.kappa3 1.490
_pdbe_chem_comp_rdkit_properties.Phi 0.532
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
HFO UniChem ChEMBL CHEMBL243161
HFO UniChem PDBe HFO
HFO UniChem 'KEGG LIGAND' C10675
HFO UniChem ChEBI 19868
HFO UniChem ChEBI 69446
HFO UniChem ZINC ZINC000000900177
HFO UniChem fdasrs 07OQ35LVBK
HFO UniChem HMDB HMDB0029661
HFO UniChem PubChem 14530
HFO UniChem NMRShiftDB 60026421
HFO UniChem ACTor 1197-09-7
HFO UniChem MetaboLights MTBLC69446
HFO UniChem BRENDA 15515
HFO UniChem ChemicalBook CB6457350
HFO UniChem MedChemExpress HY-N1775
HFO UniChem 'Probes And Drugs' PD065356
HFO UniChem 'EPA CompTox Dashboard' DTXSID30152546
HFO UniChem eMolecules 610176
HFO UniChem SureChEMBL SCHEMBL144106
HFO UniChem 'PubChem TPHARMA' 15243107
HFO UniChem Mcule MCULE-9501549860
HFO UniChem Nikkaji J7.452G
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
HFO C1 -2.165 -0.214 -0.150 ETKDGv3 1
HFO C2 -1.667 0.968 0.256 ETKDGv3 2
HFO C3 -0.201 1.146 0.381 ETKDGv3 3
HFO C4 0.646 0.137 0.093 ETKDGv3 4
HFO C5 0.077 -1.164 -0.355 ETKDGv3 5
HFO C6 -1.246 -1.325 -0.467 ETKDGv3 6
HFO O7 -3.539 -0.420 -0.280 ETKDGv3 7
HFO O8 -2.522 2.026 0.559 ETKDGv3 8
HFO C9 2.116 0.323 0.221 ETKDGv3 9
HFO O10 2.581 1.433 0.601 ETKDGv3 10
HFO C11 3.078 -0.783 -0.093 ETKDGv3 11
HFO H1 0.174 2.108 0.709 ETKDGv3 12
HFO H2 0.723 -1.998 -0.595 ETKDGv3 13
HFO H3 -1.648 -2.276 -0.794 ETKDGv3 14
HFO H4 -4.219 0.304 -0.077 ETKDGv3 15
HFO H5 -2.162 2.922 0.866 ETKDGv3 16
HFO H6 2.964 -1.091 -1.154 ETKDGv3 17
HFO H7 2.884 -1.650 0.572 ETKDGv3 18
HFO H8 4.125 -0.446 0.064 ETKDGv3 19
#