data_HPP
#
_chem_comp.id HPP
_chem_comp.name "HYDROXYPHENYL PROPIONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H10 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 166.174
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code HPP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2TPL
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HPP C1 C1 C 0 1 Y N N N N N -23.292 16.687 4.040 0.001 0.436 -0.438 C1 HPP 1
HPP C2 C2 C 0 1 Y N N N N N -23.131 17.275 2.787 -1.197 0.285 -1.110 C2 HPP 2
HPP C3 C3 C 0 1 Y N N N N N -24.221 17.708 2.049 -1.200 -0.028 -2.456 C3 HPP 3
HPP C4 C4 C 0 1 Y N N N N N -25.491 17.550 2.565 -0.000 -0.190 -3.133 C4 HPP 4
HPP O4 O4 O 0 1 N N N N N N -26.603 17.973 1.863 -0.001 -0.498 -4.456 O4 HPP 5
HPP C5 C5 C 0 1 Y N N N N N -25.680 16.971 3.805 1.200 -0.036 -2.456 C5 HPP 6
HPP C6 C6 C 0 1 Y N N N N N -24.587 16.540 4.532 1.199 0.281 -1.112 C6 HPP 7
HPP C7 C7 C 0 1 N N N N N N -22.107 16.220 4.842 0.002 0.778 1.029 C7 HPP 8
HPP C8 C8 C 0 1 N N N N N N -21.430 17.190 5.796 -0.001 -0.511 1.852 C8 HPP 9
HPP C9 C9 C 0 1 N N N N N N -20.978 18.472 5.114 -0.000 -0.170 3.320 C9 HPP 10
HPP O1 O1 O 0 1 N N N N N N -21.732 19.468 5.223 0.003 0.986 3.671 O1 HPP 11
HPP O2 O2 O 0 1 N N N N N N -19.909 18.505 4.473 -0.004 -1.150 4.237 O2 HPP 12
HPP H2 H2 H 0 1 N N N N N N -22.117 17.400 2.369 -2.131 0.411 -0.583 H2 HPP 13
HPP H3 H3 H 0 1 N N N N N N -24.079 18.174 1.059 -2.137 -0.147 -2.980 H3 HPP 14
HPP HO4 HO4 H 0 1 N N N N N N -27.477 17.864 2.218 0.001 0.340 -4.938 HO4 HPP 15
HPP H5 H5 H 0 1 N N N N N N -26.698 16.853 4.212 2.136 -0.162 -2.981 H5 HPP 16
HPP H6 H6 H 0 1 N N N N N N -24.750 16.072 5.517 2.134 0.401 -0.585 H6 HPP 17
HPP H71 1H7 H 0 1 N N N N N N -22.396 15.304 5.408 -0.884 1.364 1.266 H71 HPP 18
HPP H72 2H7 H 0 1 N N N N N N -21.340 15.811 4.143 0.895 1.357 1.266 H72 HPP 19
HPP H81 1H8 H 0 1 N N N N N N -22.085 17.413 6.669 0.885 -1.097 1.615 H81 HPP 20
HPP H82 2H8 H 0 1 N N N N N N -20.580 16.699 6.326 -0.894 -1.090 1.615 H82 HPP 21
HPP HO2 HO2 H 0 1 N N N N N N -19.626 19.305 4.047 -0.003 -0.931 5.179 HO2 HPP 22
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HPP C1 C2 DOUB Y N 1
HPP C1 C6 SING Y N 2
HPP C1 C7 SING N N 3
HPP C2 C3 SING Y N 4
HPP C2 H2 SING N N 5
HPP C3 C4 DOUB Y N 6
HPP C3 H3 SING N N 7
HPP C4 O4 SING N N 8
HPP C4 C5 SING Y N 9
HPP O4 HO4 SING N N 10
HPP C5 C6 DOUB Y N 11
HPP C5 H5 SING N N 12
HPP C6 H6 SING N N 13
HPP C7 C8 SING N N 14
HPP C7 H71 SING N N 15
HPP C7 H72 SING N N 16
HPP C8 C9 SING N N 17
HPP C8 H81 SING N N 18
HPP C8 H82 SING N N 19
HPP C9 O1 DOUB N N 20
HPP C9 O2 SING N N 21
HPP O2 HO2 SING N N 22
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HPP SMILES ACDLabs 10.04 O=C(O)CCc1ccc(O)cc1
HPP SMILES_CANONICAL CACTVS 3.341 OC(=O)CCc1ccc(O)cc1
HPP SMILES CACTVS 3.341 OC(=O)CCc1ccc(O)cc1
HPP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc(ccc1CCC(=O)O)O
HPP SMILES "OpenEye OEToolkits" 1.5.0 c1cc(ccc1CCC(=O)O)O
HPP InChI InChI 1.03 InChI=1S/C9H10O3/c10-8-4-1-7(2-5-8)3-6-9(11)12/h1-2,4-5,10H,3,6H2,(H,11,12)
HPP InChIKey InChI 1.03 NMHMNPHRMNGLLB-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
HPP "SYSTEMATIC NAME" ACDLabs 10.04 "3-(4-hydroxyphenyl)propanoic acid"
HPP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-(4-hydroxyphenyl)propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HPP 'Create component' 1999-07-08 RCSB
HPP 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id HPP
_pdbe_chem_comp_drugbank_details.drugbank_id DB03897
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Phloretic acid'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 501-97-3
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
HPP '3-(4-Hydroxyphenyl)propionic acid' DrugBank ?
HPP '3-(p-hydroxyphenyl)propionic acid' DrugBank ?
HPP '4-Hydroxyphenylpropionic acid' DrugBank ?
HPP Desaminotyrosine DrugBank ?
HPP 'Dihydro-p-coumaric acid' DrugBank ?
HPP 'Hydroxyphenyl propionic acid' DrugBank ?
HPP 'p-Hydroxyhydrocinnamic acid' DrugBank ?
HPP 'p-hydroxyphenylpropionic acid' DrugBank ?
HPP 'Phloretic acid' DrugBank ?
HPP 'Phloretinic acid' DrugBank ?
HPP 'β-(p-hydroxyphenyl)propionic acid' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id HPP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03897
_pdbe_chem_comp_drugbank_classification.parent 'Phenylpropanoic acids'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Phenylpropanoic acids'
_pdbe_chem_comp_drugbank_classification.superclass 'Phenylpropanoids and polyketides'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phenylpropanoic acids. These are compounds with a structure containing a benzene ring conjugated to a propanoic acid.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
HPP DB03897 'Tyrosine phenol-lyase' 'Citrobacter freundii' P31013 unknown 1
HPP DB03897 'Prephenate dehydrogenase' 'Aquifex aeolicus (strain VF5)' O67636 unknown 2
HPP DB03897 'Tyrosine phenol-lyase' 'Citrobacter intermedius' P31012 unknown 3
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
HPP C1 C 4.299 -0.233 1
HPP C2 C 3.000 -0.983 2
HPP C3 C 3.000 -2.482 3
HPP C4 C 4.299 -3.232 4
HPP O4 O 4.299 -4.732 5
HPP C5 C 5.598 -2.482 6
HPP C6 C 5.598 -0.983 7
HPP C7 C 4.299 1.268 8
HPP C8 C 5.598 2.018 9
HPP C9 C 5.598 3.518 10
HPP O1 O 6.897 4.268 11
HPP O2 O 4.299 4.268 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
HPP C1 C2 DOUBLE NONE 1
HPP C1 C6 SINGLE NONE 2
HPP C1 C7 SINGLE NONE 3
HPP C2 C3 SINGLE NONE 4
HPP C3 C4 DOUBLE NONE 5
HPP C4 O4 SINGLE NONE 6
HPP C4 C5 SINGLE NONE 7
HPP C5 C6 DOUBLE NONE 8
HPP C7 C8 SINGLE NONE 9
HPP C8 C9 SINGLE NONE 10
HPP C9 O1 DOUBLE NONE 11
HPP C9 O2 SINGLE NONE 12
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
HPP MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
HPP phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
HPP C1 S1 1
HPP C2 S1 1
HPP C3 S1 1
HPP C4 S1 1
HPP C5 S1 1
HPP C6 S1 1
HPP C1 F1 1
HPP C2 F1 1
HPP C3 F1 1
HPP C4 F1 1
HPP C5 F1 1
HPP C6 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id HPP
_pdbe_chem_comp_rdkit_properties.exactmw 166.063
_pdbe_chem_comp_rdkit_properties.amw 166.176
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 22
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.222
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 84.499
_pdbe_chem_comp_rdkit_properties.tpsa 57.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.892
_pdbe_chem_comp_rdkit_properties.CrippenMR 43.188
_pdbe_chem_comp_rdkit_properties.chi0v 5.725
_pdbe_chem_comp_rdkit_properties.chi1v 2.862
_pdbe_chem_comp_rdkit_properties.chi2v 0.892
_pdbe_chem_comp_rdkit_properties.chi3v 0.892
_pdbe_chem_comp_rdkit_properties.chi4v 0.477
_pdbe_chem_comp_rdkit_properties.chi0n 15.725
_pdbe_chem_comp_rdkit_properties.chi1n 7.679
_pdbe_chem_comp_rdkit_properties.chi2n 0.892
_pdbe_chem_comp_rdkit_properties.chi3n 0.892
_pdbe_chem_comp_rdkit_properties.chi4n 0.477
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.510
_pdbe_chem_comp_rdkit_properties.kappa1 2.250
_pdbe_chem_comp_rdkit_properties.kappa2 3.759
_pdbe_chem_comp_rdkit_properties.kappa3 2.617
_pdbe_chem_comp_rdkit_properties.Phi 0.705
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
HPP UniChem ChEMBL CHEMBL1172560
HPP UniChem DrugBank DB03897
HPP UniChem PDBe HPP
HPP UniChem 'KEGG LIGAND' C01744
HPP UniChem ChEBI 32980
HPP UniChem ZINC ZINC000008383206
HPP UniChem eMolecules 521593
HPP UniChem fdasrs 6QNC6P18SR
HPP UniChem HMDB HMDB0002199
HPP UniChem 'PubChem TPHARMA' 15194951
HPP UniChem NMRShiftDB 10024828
HPP UniChem ACTor 501-97-3
HPP UniChem Nikkaji J1.565B
HPP UniChem BindingDb 231636
HPP UniChem 'EPA CompTox Dashboard' DTXSID2075427
HPP UniChem MetaboLights MTBLC32980
HPP UniChem BRENDA 101242
HPP UniChem BRENDA 112513
HPP UniChem BRENDA 13256
HPP UniChem BRENDA 16733
HPP UniChem BRENDA 207381
HPP UniChem BRENDA 224786
HPP UniChem BRENDA 225179
HPP UniChem BRENDA 23336
HPP UniChem BRENDA 248254
HPP UniChem BRENDA 32385
HPP UniChem BRENDA 44694
HPP UniChem BRENDA 49767
HPP UniChem BRENDA 49768
HPP UniChem BRENDA 51341
HPP UniChem BRENDA 5493
HPP UniChem BRENDA 83913
HPP UniChem BRENDA 9995
HPP UniChem ChemicalBook CB1740365
HPP UniChem MedChemExpress HY-W015346
HPP UniChem 'Probes And Drugs' PD006673
HPP UniChem SureChEMBL SCHEMBL35486
HPP UniChem PubChem 10394
HPP UniChem Mcule MCULE-6058509896
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
HPP C1 0.338 -0.000 0.534 ETKDGv3 1
HPP C2 1.152 -1.071 0.562 ETKDGv3 2
HPP C3 2.563 -0.946 0.140 ETKDGv3 3
HPP C4 3.036 0.232 -0.289 ETKDGv3 4
HPP O4 4.366 0.340 -0.686 ETKDGv3 5
HPP C5 2.140 1.410 -0.339 ETKDGv3 6
HPP C6 0.863 1.300 0.047 ETKDGv3 7
HPP C7 -1.109 -0.123 0.927 ETKDGv3 8
HPP C8 -1.966 -0.495 -0.285 ETKDGv3 9
HPP C9 -3.406 -0.603 0.105 ETKDGv3 10
HPP O1 -3.874 -1.706 0.494 ETKDGv3 11
HPP O2 -4.217 0.527 0.079 ETKDGv3 12
HPP H2 0.786 -2.036 0.891 ETKDGv3 13
HPP H3 3.210 -1.813 0.176 ETKDGv3 14
HPP HO4 4.746 1.220 -1.014 ETKDGv3 15
HPP H5 2.517 2.361 -0.692 ETKDGv3 16
HPP H6 0.213 2.165 0.002 ETKDGv3 17
HPP H71 -1.225 -0.894 1.721 ETKDGv3 18
HPP H72 -1.460 0.844 1.351 ETKDGv3 19
HPP H81 -1.623 -1.466 -0.707 ETKDGv3 20
HPP H82 -1.861 0.282 -1.073 ETKDGv3 21
HPP HO2 -5.190 0.474 0.356 ETKDGv3 22
#