data_I7E
#
_chem_comp.id I7E
_chem_comp.name tert-butylbenzene
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H14"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-01-20
_chem_comp.pdbx_modified_date 2022-04-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 134.218
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code I7E
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7TM2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
I7E C01 C1 C 0 1 N N N N N N -5.912 -6.635 -12.103 2.009 -0.723 -1.249 C01 I7E 1
I7E C02 C2 C 0 1 N N N N N N -5.020 -5.417 -11.859 1.499 0.000 -0.001 C02 I7E 2
I7E C03 C3 C 0 1 N N N N N N -3.824 -5.498 -12.821 2.009 -0.720 1.250 C03 I7E 3
I7E C04 C4 C 0 1 N N N N N N -4.510 -5.443 -10.411 2.009 1.443 -0.002 C04 I7E 4
I7E C05 C5 C 0 1 Y N N N N N -5.781 -4.096 -12.077 -0.008 0.000 -0.000 C05 I7E 5
I7E C06 C6 C 0 1 Y N N N N N -7.167 -4.057 -12.102 -0.699 -1.197 0.001 C06 I7E 6
I7E C07 C7 C 0 1 Y N N N N N -7.856 -2.863 -12.274 -2.082 -1.197 0.001 C07 I7E 7
I7E C08 C8 C 0 1 Y N N N N N -7.151 -1.674 -12.406 -2.773 -0.000 -0.001 C08 I7E 8
I7E C09 C9 C 0 1 Y N N N N N -5.772 -1.692 -12.376 -2.082 1.197 -0.002 C09 I7E 9
I7E C10 C10 C 0 1 Y N N N N N -5.092 -2.888 -12.208 -0.700 1.197 0.004 C10 I7E 10
I7E H013 H1 H 0 0 N N N N N N -6.777 -6.599 -11.424 3.099 -0.722 -1.249 H013 I7E 11
I7E H012 H2 H 0 0 N N N N N N -6.264 -6.629 -13.145 1.645 -1.750 -1.248 H012 I7E 12
I7E H011 H3 H 0 0 N N N N N N -5.337 -7.554 -11.915 1.645 -0.210 -2.139 H011 I7E 13
I7E H031 H4 H 0 0 N N N N N N -3.167 -4.630 -12.664 3.099 -0.720 1.249 H031 I7E 14
I7E H033 H5 H 0 0 N N N N N N -3.261 -6.424 -12.629 1.646 -0.205 2.139 H033 I7E 15
I7E H032 H6 H 0 0 N N N N N N -4.188 -5.499 -13.859 1.646 -1.747 1.251 H032 I7E 16
I7E H041 H7 H 0 0 N N N N N N -5.364 -5.385 -9.720 1.645 1.956 -0.893 H041 I7E 17
I7E H043 H8 H 0 0 N N N N N N -3.958 -6.378 -10.234 1.645 1.957 0.887 H043 I7E 18
I7E H042 H9 H 0 0 N N N N N N -3.843 -4.585 -10.242 3.099 1.443 -0.002 H042 I7E 19
I7E H061 H10 H 0 0 N N N N N N -7.723 -4.975 -11.985 -0.159 -2.132 0.002 H061 I7E 20
I7E H071 H11 H 0 0 N N N N N N -8.936 -2.860 -12.305 -2.622 -2.133 0.001 H071 I7E 21
I7E H081 H12 H 0 0 N N N N N N -7.679 -0.740 -12.531 -3.853 -0.000 -0.006 H081 I7E 22
I7E H091 H13 H 0 0 N N N N N N -5.220 -0.770 -12.484 -2.622 2.132 -0.003 H091 I7E 23
I7E H101 H14 H 0 0 N N N N N N -4.012 -2.886 -12.178 -0.160 2.132 0.003 H101 I7E 24
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
I7E C03 C02 SING N N 1
I7E C08 C09 DOUB Y N 2
I7E C08 C07 SING Y N 3
I7E C09 C10 SING Y N 4
I7E C07 C06 DOUB Y N 5
I7E C10 C05 DOUB Y N 6
I7E C01 C02 SING N N 7
I7E C06 C05 SING Y N 8
I7E C05 C02 SING N N 9
I7E C02 C04 SING N N 10
I7E C01 H013 SING N N 11
I7E C01 H012 SING N N 12
I7E C01 H011 SING N N 13
I7E C03 H031 SING N N 14
I7E C03 H033 SING N N 15
I7E C03 H032 SING N N 16
I7E C04 H041 SING N N 17
I7E C04 H043 SING N N 18
I7E C04 H042 SING N N 19
I7E C06 H061 SING N N 20
I7E C07 H071 SING N N 21
I7E C08 H081 SING N N 22
I7E C09 H091 SING N N 23
I7E C10 H101 SING N N 24
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
I7E SMILES ACDLabs 12.01 CC(C)(C)c1ccccc1
I7E InChI InChI 1.03 InChI=1S/C10H14/c1-10(2,3)9-7-5-4-6-8-9/h4-8H,1-3H3
I7E InChIKey InChI 1.03 YTZKOQUCBOVLHL-UHFFFAOYSA-N
I7E SMILES_CANONICAL CACTVS 3.385 CC(C)(C)c1ccccc1
I7E SMILES CACTVS 3.385 CC(C)(C)c1ccccc1
I7E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC(C)(C)c1ccccc1
I7E SMILES "OpenEye OEToolkits" 2.0.7 CC(C)(C)c1ccccc1
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
I7E "SYSTEMATIC NAME" ACDLabs 12.01 tert-butylbenzene
I7E "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ~{tert}-butylbenzene
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
I7E 'Create component' 2022-01-20 RCSB
I7E 'Initial release' 2022-04-20 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
I7E C01 C 6.000 1.500 1
I7E C02 C 4.500 1.500 2
I7E C03 C 4.500 3.000 3
I7E C04 C 3.000 1.500 4
I7E C05 C 4.500 0.000 5
I7E C06 C 5.799 -0.750 6
I7E C07 C 5.799 -2.250 7
I7E C08 C 4.500 -3.000 8
I7E C09 C 3.201 -2.250 9
I7E C10 C 3.201 -0.750 10
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
I7E C03 C02 SINGLE NONE 1
I7E C08 C09 DOUBLE NONE 2
I7E C08 C07 SINGLE NONE 3
I7E C09 C10 SINGLE NONE 4
I7E C07 C06 DOUBLE NONE 5
I7E C10 C05 DOUBLE NONE 6
I7E C01 C02 SINGLE NONE 7
I7E C06 C05 SINGLE NONE 8
I7E C05 C02 SINGLE NONE 9
I7E C02 C04 SINGLE NONE 10
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
I7E MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
I7E phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
I7E C05 S1 1
I7E C06 S1 1
I7E C07 S1 1
I7E C08 S1 1
I7E C09 S1 1
I7E C10 S1 1
I7E C05 F1 1
I7E C10 F1 1
I7E C09 F1 1
I7E C08 F1 1
I7E C07 F1 1
I7E C06 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id I7E
_pdbe_chem_comp_rdkit_properties.exactmw 134.110
_pdbe_chem_comp_rdkit_properties.amw 134.222
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 0
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 0
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 10
_pdbe_chem_comp_rdkit_properties.NumAtoms 24
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 0
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.400
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 82.561
_pdbe_chem_comp_rdkit_properties.tpsa 0
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.929
_pdbe_chem_comp_rdkit_properties.CrippenMR 44.876
_pdbe_chem_comp_rdkit_properties.chi0v 5
_pdbe_chem_comp_rdkit_properties.chi1v 2.500
_pdbe_chem_comp_rdkit_properties.chi2v 0.875
_pdbe_chem_comp_rdkit_properties.chi3v 0.875
_pdbe_chem_comp_rdkit_properties.chi4v 0.438
_pdbe_chem_comp_rdkit_properties.chi0n 19
_pdbe_chem_comp_rdkit_properties.chi1n 9.500
_pdbe_chem_comp_rdkit_properties.chi2n 0.875
_pdbe_chem_comp_rdkit_properties.chi3n 0.875
_pdbe_chem_comp_rdkit_properties.chi4n 0.438
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.780
_pdbe_chem_comp_rdkit_properties.kappa1 1.155
_pdbe_chem_comp_rdkit_properties.kappa2 2.452
_pdbe_chem_comp_rdkit_properties.kappa3 1.598
_pdbe_chem_comp_rdkit_properties.Phi 0.283
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
I7E UniChem ChEMBL CHEMBL1797277
I7E UniChem PDBe I7E
I7E UniChem ZINC ZINC000001693606
I7E UniChem fdasrs M1R2NME7S2
I7E UniChem HMDB HMDB0258847
I7E UniChem 'PubChem TPHARMA' 14793786
I7E UniChem NMRShiftDB 10016561
I7E UniChem ACTor 98-06-6
I7E UniChem ChemicalBook CB6161293
I7E UniChem 'EPA CompTox Dashboard' DTXSID3047138
I7E UniChem eMolecules 487475
I7E UniChem SureChEMBL SCHEMBL18889
I7E UniChem SureChEMBL SCHEMBL21925696
I7E UniChem PubChem 7366
I7E UniChem Mcule MCULE-8566444437
I7E UniChem Nikkaji J43.279B
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
I7E C01 -1.636 1.489 -0.071 ETKDGv3 1
I7E C02 -1.147 0.027 -0.155 ETKDGv3 2
I7E C03 -1.705 -0.581 -1.463 ETKDGv3 3
I7E C04 -1.732 -0.780 1.025 ETKDGv3 4
I7E C05 0.394 -0.009 -0.096 ETKDGv3 5
I7E C06 1.225 -0.580 -1.204 ETKDGv3 6
I7E C07 2.562 -0.595 -1.120 ETKDGv3 7
I7E C08 3.238 -0.050 0.069 ETKDGv3 8
I7E C09 2.517 0.463 1.068 ETKDGv3 9
I7E C10 1.043 0.485 0.985 ETKDGv3 10
I7E H013 -1.190 2.094 -0.890 ETKDGv3 11
I7E H012 -1.361 1.957 0.897 ETKDGv3 12
I7E H011 -2.743 1.541 -0.162 ETKDGv3 13
I7E H031 -2.816 -0.540 -1.474 ETKDGv3 14
I7E H033 -1.342 -0.016 -2.349 ETKDGv3 15
I7E H032 -1.410 -1.648 -1.561 ETKDGv3 16
I7E H041 -1.356 -1.825 1.003 ETKDGv3 17
I7E H043 -2.842 -0.807 0.972 ETKDGv3 18
I7E H042 -1.457 -0.331 2.002 ETKDGv3 19
I7E H061 0.776 -0.991 -2.095 ETKDGv3 20
I7E H071 3.151 -1.010 -1.928 ETKDGv3 21
I7E H081 4.319 -0.066 0.129 ETKDGv3 22
I7E H091 3.012 0.865 1.943 ETKDGv3 23
I7E H101 0.501 0.910 1.818 ETKDGv3 24
#