data_ISF
#
_chem_comp.id ISF
_chem_comp.name "P-(2'-IODO-5'-THENOYL)HYDROTROPIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H11 I O3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 386.205
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ISF
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1PGE
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ISF S1 S1 S 0 1 Y N N N N N 68.928 25.763 194.351 -0.263 0.066 0.988 S1 ISF 1
ISF C2 C2 C 0 1 Y N N N N N 68.999 24.766 195.683 -1.991 0.097 0.545 C2 ISF 2
ISF C3 C3 C 0 1 Y N N N N N 69.829 25.194 196.727 -2.606 0.073 1.791 C3 ISF 3
ISF C4 C4 C 0 1 Y N N N N N 70.419 26.447 196.345 -1.788 0.027 2.889 C4 ISF 4
ISF C5 C5 C 0 1 Y N N N N N 69.987 26.865 195.050 -0.438 0.019 2.713 C5 ISF 5
ISF I1 I1 I 0 1 N N N N N N 70.505 28.618 194.153 1.064 -0.036 4.171 I1 ISF 6
ISF C6 C6 C 0 1 N N N N N N 68.255 23.608 195.744 -2.602 0.141 -0.783 C6 ISF 7
ISF O7 O7 O 0 1 N N N N N N 67.511 23.340 194.816 -3.804 0.297 -0.896 O7 ISF 8
ISF C8 C8 C 0 1 Y N N N N N 68.316 22.714 196.871 -1.759 -0.004 -1.989 C8 ISF 9
ISF C9 C9 C 0 1 Y N N N N N 67.134 22.297 197.460 -2.306 0.204 -3.256 C9 ISF 10
ISF C10 C10 C 0 1 Y N N N N N 67.137 21.380 198.465 -1.514 0.067 -4.377 C10 ISF 11
ISF C11 C11 C 0 1 Y N N N N N 68.324 20.851 198.923 -0.179 -0.276 -4.248 C11 ISF 12
ISF C12 C12 C 0 1 Y N N N N N 69.518 21.272 198.356 0.367 -0.490 -2.995 C12 ISF 13
ISF C13 C13 C 0 1 Y N N N N N 69.513 22.204 197.333 -0.412 -0.351 -1.866 C13 ISF 14
ISF C14 C14 C 0 1 N N S N N N 68.309 19.823 200.000 0.679 -0.423 -5.477 C14 ISF 15
ISF C15 C15 C 0 1 N N N N N N 67.055 18.968 199.991 1.230 -1.849 -5.546 C15 ISF 16
ISF C16 C16 C 0 1 N N N N N N 68.473 20.510 201.335 1.823 0.554 -5.410 C16 ISF 17
ISF O17 O17 O 0 1 N N N N N N 69.500 20.235 201.974 1.930 1.296 -4.462 O17 ISF 18
ISF O18 O18 O 0 1 N N N N N N 67.585 21.300 201.728 2.724 0.603 -6.405 O18 ISF 19
ISF H3 H3 H 0 1 N N N N N N 69.988 24.647 197.671 -3.682 0.082 1.889 H3 ISF 20
ISF H4 H4 H 0 1 N N N N N N 71.121 27.020 196.972 -2.209 0.003 3.884 H4 ISF 21
ISF H9 H9 H 0 1 N N N N N N 66.167 22.705 197.120 -3.347 0.473 -3.359 H9 ISF 22
ISF H10 H10 H 0 1 N N N N N N 66.177 21.065 198.908 -1.935 0.229 -5.358 H10 ISF 23
ISF H12 H12 H 0 1 N N N N N N 70.475 20.863 198.720 1.408 -0.759 -2.901 H12 ISF 24
ISF H13 H13 H 0 1 N N N N N N 70.463 22.540 196.885 0.016 -0.515 -0.888 H13 ISF 25
ISF H14 H14 H 0 1 N N N N N N 69.158 19.124 199.814 0.080 -0.222 -6.365 H14 ISF 26
ISF H151 1H15 H 0 0 N N N N N N 67.043 18.198 200.797 1.829 -2.050 -4.657 H151 ISF 27
ISF H152 2H15 H 0 0 N N N N N N 66.140 19.604 200.036 0.403 -2.557 -5.594 H152 ISF 28
ISF H153 3H15 H 0 0 N N N N N N 66.901 18.498 198.991 1.852 -1.955 -6.435 H153 ISF 29
ISF HO8 HO8 H 0 1 N N N N N N 67.688 21.732 202.567 3.458 1.231 -6.362 HO8 ISF 30
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ISF S1 C2 SING Y N 1
ISF S1 C5 SING Y N 2
ISF C2 C3 DOUB Y N 3
ISF C2 C6 SING N N 4
ISF C3 C4 SING Y N 5
ISF C3 H3 SING N N 6
ISF C4 C5 DOUB Y N 7
ISF C4 H4 SING N N 8
ISF C5 I1 SING N N 9
ISF C6 O7 DOUB N N 10
ISF C6 C8 SING N N 11
ISF C8 C9 DOUB Y N 12
ISF C8 C13 SING Y N 13
ISF C9 C10 SING Y N 14
ISF C9 H9 SING N N 15
ISF C10 C11 DOUB Y N 16
ISF C10 H10 SING N N 17
ISF C11 C12 SING Y N 18
ISF C11 C14 SING N N 19
ISF C12 C13 DOUB Y N 20
ISF C12 H12 SING N N 21
ISF C13 H13 SING N N 22
ISF C14 C15 SING N N 23
ISF C14 C16 SING N N 24
ISF C14 H14 SING N N 25
ISF C15 H151 SING N N 26
ISF C15 H152 SING N N 27
ISF C15 H153 SING N N 28
ISF C16 O17 DOUB N N 29
ISF C16 O18 SING N N 30
ISF O18 HO8 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ISF SMILES ACDLabs 10.04 O=C(c1ccc(cc1)C(C(=O)O)C)c2sc(I)cc2
ISF SMILES_CANONICAL CACTVS 3.341 C[C@H](C(O)=O)c1ccc(cc1)C(=O)c2sc(I)cc2
ISF SMILES CACTVS 3.341 C[CH](C(O)=O)c1ccc(cc1)C(=O)c2sc(I)cc2
ISF SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C[C@@H](c1ccc(cc1)C(=O)c2ccc(s2)I)C(=O)O
ISF SMILES "OpenEye OEToolkits" 1.5.0 CC(c1ccc(cc1)C(=O)c2ccc(s2)I)C(=O)O
ISF InChI InChI 1.03 InChI=1S/C14H11IO3S/c1-8(14(17)18)9-2-4-10(5-3-9)13(16)11-6-7-12(15)19-11/h2-8H,1H3,(H,17,18)/t8-/m0/s1
ISF InChIKey InChI 1.03 UIZPHGUBGPJBAR-QMMMGPOBSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ISF "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-2-{4-[(5-iodothiophen-2-yl)carbonyl]phenyl}propanoic acid"
ISF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[4-(5-iodothiophen-2-yl)carbonylphenyl]propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ISF 'Create component' 1999-07-08 RCSB
ISF 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id ISF
_pdbe_chem_comp_drugbank_details.drugbank_id DB03752
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "P-(2'-Iodo-5'-Thenoyl)Hydrotropic Acid"
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id ISF
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03752
_pdbe_chem_comp_drugbank_classification.parent Aryl-phenylketones
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as aryl-phenylketones. These are aromatic compounds containing a ketone substituted by one aryl group, and a phenyl group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id ISF
_pdbe_chem_comp_drugbank_targets.drugbank_id DB03752
_pdbe_chem_comp_drugbank_targets.name 'Prostaglandin G/H synthase 1'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P23219
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ISF S1 S 8.267 3.220 1
ISF C2 C 6.897 3.831 2
ISF C3 C 7.054 5.322 3
ISF C4 C 8.521 5.634 4
ISF C5 C 9.271 4.335 5
ISF I1 I 10.763 4.178 6
ISF C6 C 5.598 3.081 7
ISF O7 O 4.299 3.831 8
ISF C8 C 5.598 1.581 9
ISF C9 C 6.897 0.831 10
ISF C10 C 6.897 -0.669 11
ISF C11 C 5.598 -1.419 12
ISF C12 C 4.299 -0.669 13
ISF C13 C 4.299 0.831 14
ISF C14 C 5.598 -2.919 15
ISF C15 C 6.897 -3.669 16
ISF C16 C 4.299 -3.669 17
ISF O17 O 4.299 -5.169 18
ISF O18 O 3.000 -2.919 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ISF S1 C2 SINGLE NONE 1
ISF S1 C5 SINGLE NONE 2
ISF C2 C3 DOUBLE NONE 3
ISF C2 C6 SINGLE NONE 4
ISF C3 C4 SINGLE NONE 5
ISF C4 C5 DOUBLE NONE 6
ISF C5 I1 SINGLE NONE 7
ISF C6 O7 DOUBLE NONE 8
ISF C6 C8 SINGLE NONE 9
ISF C8 C9 DOUBLE NONE 10
ISF C8 C13 SINGLE NONE 11
ISF C9 C10 SINGLE NONE 12
ISF C10 C11 DOUBLE NONE 13
ISF C11 C12 SINGLE NONE 14
ISF C11 C14 SINGLE NONE 15
ISF C12 C13 DOUBLE NONE 16
ISF C14 C15 SINGLE BEGINDASH 17
ISF C14 C16 SINGLE NONE 18
ISF C16 O17 DOUBLE NONE 19
ISF C16 O18 SINGLE NONE 20
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ISF MurckoScaffold S1 scaffold O=C(c1ccccc1)c1cccs1 InChI=1S/C11H8OS/c12-11(10-7-4-8-13-10)9-5-2-1-3-6-9/h1-8H DWYFUJJWTRPARQ-UHFFFAOYSA-N
ISF phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
ISF thiophen F2 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ISF S1 S1 1
ISF C2 S1 1
ISF C3 S1 1
ISF C4 S1 1
ISF C5 S1 1
ISF C6 S1 1
ISF O7 S1 1
ISF C8 S1 1
ISF C9 S1 1
ISF C10 S1 1
ISF C11 S1 1
ISF C12 S1 1
ISF C13 S1 1
ISF C8 F1 1
ISF C9 F1 1
ISF C10 F1 1
ISF C11 F1 1
ISF C12 F1 1
ISF C13 F1 1
ISF C2 F2 1
ISF C3 F2 1
ISF C4 F2 1
ISF C5 F2 1
ISF S1 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ISF
_pdbe_chem_comp_rdkit_properties.exactmw 385.947
_pdbe_chem_comp_rdkit_properties.amw 386.210
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 30
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.143
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 143.509
_pdbe_chem_comp_rdkit_properties.tpsa 54.370
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.608
_pdbe_chem_comp_rdkit_properties.CrippenMR 82.163
_pdbe_chem_comp_rdkit_properties.chi0v 11.985
_pdbe_chem_comp_rdkit_properties.chi1v 6.605
_pdbe_chem_comp_rdkit_properties.chi2v 3.682
_pdbe_chem_comp_rdkit_properties.chi3v 3.682
_pdbe_chem_comp_rdkit_properties.chi4v 2.490
_pdbe_chem_comp_rdkit_properties.chi0n 20.011
_pdbe_chem_comp_rdkit_properties.chi1n 10.118
_pdbe_chem_comp_rdkit_properties.chi2n 1.978
_pdbe_chem_comp_rdkit_properties.chi3n 1.978
_pdbe_chem_comp_rdkit_properties.chi4n 1.116
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.210
_pdbe_chem_comp_rdkit_properties.kappa1 5.651
_pdbe_chem_comp_rdkit_properties.kappa2 5.833
_pdbe_chem_comp_rdkit_properties.kappa3 3.217
_pdbe_chem_comp_rdkit_properties.Phi 1.735
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ISF UniChem DrugBank DB03752
ISF UniChem PDBe ISF
ISF UniChem ZINC ZINC000002047443
ISF UniChem PubChem 447834
ISF UniChem 'Probes And Drugs' PD007268
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ISF S1 5.107 -1.332 -0.075 ETKDGv3 1
ISF C2 3.479 -0.608 -0.105 ETKDGv3 2
ISF C3 3.470 0.502 0.639 ETKDGv3 3
ISF C4 4.765 0.804 1.288 ETKDGv3 4
ISF C5 5.728 -0.070 1.010 ETKDGv3 5
ISF I1 7.702 0.026 1.735 ETKDGv3 6
ISF C6 2.357 -1.125 -0.912 ETKDGv3 7
ISF O7 2.615 -1.897 -1.874 ETKDGv3 8
ISF C8 0.946 -0.772 -0.629 ETKDGv3 9
ISF C9 0.067 -0.626 -1.636 ETKDGv3 10
ISF C10 -1.343 -0.286 -1.358 ETKDGv3 11
ISF C11 -1.774 -0.132 -0.091 ETKDGv3 12
ISF C12 -0.811 -0.324 1.022 ETKDGv3 13
ISF C13 0.467 -0.628 0.770 ETKDGv3 14
ISF C14 -3.216 0.215 0.220 ETKDGv3 15
ISF C15 -4.171 -0.899 -0.230 ETKDGv3 16
ISF C16 -3.586 1.548 -0.374 ETKDGv3 17
ISF O17 -3.966 1.636 -1.574 ETKDGv3 18
ISF O18 -3.462 2.699 0.396 ETKDGv3 19
ISF H3 2.609 1.149 0.738 ETKDGv3 20
ISF H4 4.918 1.664 1.926 ETKDGv3 21
ISF H9 0.382 -0.738 -2.667 ETKDGv3 22
ISF H10 -2.020 -0.161 -2.194 ETKDGv3 23
ISF H12 -1.140 -0.227 2.049 ETKDGv3 24
ISF H13 1.146 -0.789 1.598 ETKDGv3 25
ISF H14 -3.336 0.306 1.322 ETKDGv3 26
ISF H151 -4.137 -1.042 -1.331 ETKDGv3 27
ISF H152 -3.895 -1.856 0.261 ETKDGv3 28
ISF H153 -5.213 -0.646 0.062 ETKDGv3 29
ISF HO8 -3.689 3.609 0.012 ETKDGv3 30
#