data_J2Y
#
_chem_comp.id J2Y
_chem_comp.name N-{4-[3-(5-methoxypyridin-2-yl)-1H-pyrrolo[3,2-b]pyridin-2-yl]pyridin-2-yl}acetamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H17 N5 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-08-06
_chem_comp.pdbx_modified_date 2018-10-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 359.381
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code J2Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5QIM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J2Y C18 C1 C 0 1 Y N N N N N 7.978 10.864 5.640 -0.678 2.925 0.012 C18 J2Y 1
J2Y C16 C2 C 0 1 Y N N N N N 5.746 10.260 5.495 -1.726 0.867 0.050 C16 J2Y 2
J2Y C15 C3 C 0 1 Y N N N N N 2.351 7.700 3.719 1.977 -1.344 0.168 C15 J2Y 3
J2Y C19 C4 C 0 1 Y N N N N N 7.863 11.700 4.545 -1.877 3.581 0.249 C19 J2Y 4
J2Y C20 C5 C 0 1 Y N N N N N 6.632 11.816 3.905 -3.046 2.836 0.391 C20 J2Y 5
J2Y C21 C6 C 0 1 Y N N N N N 5.555 11.082 4.379 -2.967 1.460 0.290 C21 J2Y 6
J2Y C23 C7 C 0 1 N N N N N N -0.145 6.392 2.575 5.543 -0.732 0.502 C23 J2Y 7
J2Y C11 C8 C 0 1 Y N N N N N 4.716 7.929 3.386 1.084 0.333 -1.305 C11 J2Y 8
J2Y C12 C9 C 0 1 Y N N N N N 4.562 7.266 2.176 2.363 0.826 -1.451 C12 J2Y 9
J2Y C27 C10 C 0 1 N N N N N N 10.236 12.176 4.501 -0.672 5.630 0.186 C27 J2Y 10
J2Y C1 C11 C 0 1 Y N N N N N 4.111 9.822 7.500 -2.728 -1.571 0.056 C1 J2Y 11
J2Y C2 C12 C 0 1 Y N N N N N 2.924 9.102 7.633 -2.152 -2.842 -0.120 C2 J2Y 12
J2Y C3 C13 C 0 1 Y N N N N N 2.184 9.205 8.816 -2.973 -3.967 -0.055 C3 J2Y 13
J2Y C4 C14 C 0 1 Y N N N N N 2.691 10.013 9.835 -4.323 -3.781 0.181 C4 J2Y 14
J2Y C5 C15 C 0 1 Y N N N N N 3.899 10.677 9.630 -4.821 -2.498 0.344 C5 J2Y 15
J2Y N6 N1 N 0 1 Y N N N N N 4.617 10.597 8.483 -4.033 -1.447 0.280 N6 J2Y 16
J2Y C7 C16 C 0 1 Y N N N N N 4.599 9.555 6.114 -1.627 -0.604 -0.060 C7 J2Y 17
J2Y C8 C17 C 0 1 Y N N N N N 3.692 8.689 5.544 -0.482 -1.339 -0.294 C8 J2Y 18
J2Y N9 N2 N 0 1 Y N N N N N 2.690 8.407 6.463 -0.802 -2.673 -0.333 N9 J2Y 19
J2Y C10 C18 C 0 1 Y N N N N N 3.591 8.130 4.184 0.872 -0.779 -0.478 C10 J2Y 20
J2Y N13 N3 N 0 1 Y N N N N N 3.383 6.806 1.717 3.381 0.274 -0.817 N13 J2Y 21
J2Y C14 C19 C 0 1 Y N N N N N 2.292 7.012 2.494 3.229 -0.781 -0.031 C14 J2Y 22
J2Y N17 N4 N 0 1 Y N N N N N 6.936 10.137 6.114 -0.634 1.612 -0.079 N17 J2Y 23
J2Y N22 N5 N 0 1 N N N N N N 1.092 6.456 1.987 4.341 -1.332 0.606 N22 J2Y 24
J2Y O24 O1 O 0 1 N N N N N N -0.398 6.872 3.677 5.678 0.234 -0.219 O24 J2Y 25
J2Y C25 C20 C 0 1 N N N N N N -1.223 5.731 1.753 6.719 -1.261 1.281 C25 J2Y 26
J2Y O26 O2 O 0 1 N N N N N N 8.914 12.375 3.967 -1.912 4.937 0.342 O26 J2Y 27
J2Y H35 H1 H 0 1 N N N N N N 8.934 10.787 6.137 0.230 3.499 -0.103 H35 J2Y 28
J2Y H34 H2 H 0 1 N N N N N N 1.453 7.891 4.288 1.856 -2.201 0.813 H34 J2Y 29
J2Y H36 H3 H 0 1 N N N N N N 6.517 12.468 3.052 -3.992 3.323 0.576 H36 J2Y 30
J2Y H37 H4 H 0 1 N N N N N N 4.590 11.144 3.897 -3.853 0.852 0.394 H37 J2Y 31
J2Y H32 H5 H 0 1 N N N N N N 5.687 8.281 3.702 0.257 0.797 -1.821 H32 J2Y 32
J2Y H33 H6 H 0 1 N N N N N N 5.440 7.110 1.567 2.534 1.682 -2.087 H33 J2Y 33
J2Y H42 H7 H 0 1 N N N N N N 10.957 12.782 3.932 -0.257 5.414 -0.799 H42 J2Y 34
J2Y H43 H8 H 0 1 N N N N N N 10.254 12.481 5.558 -0.840 6.702 0.283 H43 J2Y 35
J2Y H44 H9 H 0 1 N N N N N N 10.507 11.113 4.421 0.028 5.301 0.955 H44 J2Y 36
J2Y H28 H10 H 0 1 N N N N N N 1.250 8.676 8.937 -2.564 -4.958 -0.186 H28 J2Y 37
J2Y H29 H11 H 0 1 N N N N N N 2.156 10.122 10.767 -4.985 -4.632 0.236 H29 J2Y 38
J2Y H30 H12 H 0 1 N N N N N N 4.285 11.290 10.431 -5.876 -2.358 0.528 H30 J2Y 39
J2Y H31 H13 H 0 1 N N N N N N 1.917 7.794 6.302 -0.169 -3.392 -0.483 H31 J2Y 40
J2Y H38 H14 H 0 1 N N N N N N 1.156 6.054 1.073 4.249 -2.147 1.123 H38 J2Y 41
J2Y H40 H15 H 0 1 N N N N N N -2.177 5.771 2.299 7.598 -0.652 1.070 H40 J2Y 42
J2Y H39 H16 H 0 1 N N N N N N -1.328 6.259 0.793 6.497 -1.221 2.347 H39 J2Y 43
J2Y H41 H17 H 0 1 N N N N N N -0.950 4.682 1.567 6.914 -2.293 0.989 H41 J2Y 44
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J2Y N13 C12 DOUB Y N 1
J2Y N13 C14 SING Y N 2
J2Y C25 C23 SING N N 3
J2Y N22 C14 SING N N 4
J2Y N22 C23 SING N N 5
J2Y C12 C11 SING Y N 6
J2Y C14 C15 DOUB Y N 7
J2Y C23 O24 DOUB N N 8
J2Y C11 C10 DOUB Y N 9
J2Y C15 C10 SING Y N 10
J2Y C20 C21 DOUB Y N 11
J2Y C20 C19 SING Y N 12
J2Y O26 C27 SING N N 13
J2Y O26 C19 SING N N 14
J2Y C10 C8 SING N N 15
J2Y C21 C16 SING Y N 16
J2Y C19 C18 DOUB Y N 17
J2Y C16 C7 SING N N 18
J2Y C16 N17 DOUB Y N 19
J2Y C8 C7 DOUB Y N 20
J2Y C8 N9 SING Y N 21
J2Y C18 N17 SING Y N 22
J2Y C7 C1 SING Y N 23
J2Y N9 C2 SING Y N 24
J2Y C1 C2 DOUB Y N 25
J2Y C1 N6 SING Y N 26
J2Y C2 C3 SING Y N 27
J2Y N6 C5 DOUB Y N 28
J2Y C3 C4 DOUB Y N 29
J2Y C5 C4 SING Y N 30
J2Y C18 H35 SING N N 31
J2Y C15 H34 SING N N 32
J2Y C20 H36 SING N N 33
J2Y C21 H37 SING N N 34
J2Y C11 H32 SING N N 35
J2Y C12 H33 SING N N 36
J2Y C27 H42 SING N N 37
J2Y C27 H43 SING N N 38
J2Y C27 H44 SING N N 39
J2Y C3 H28 SING N N 40
J2Y C4 H29 SING N N 41
J2Y C5 H30 SING N N 42
J2Y N9 H31 SING N N 43
J2Y N22 H38 SING N N 44
J2Y C25 H40 SING N N 45
J2Y C25 H39 SING N N 46
J2Y C25 H41 SING N N 47
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J2Y SMILES ACDLabs 12.01 c4nc(c2c1c(cccn1)nc2c3cc(ncc3)NC(=O)C)ccc4OC
J2Y InChI InChI 1.03 InChI=1S/C20H17N5O2/c1-12(26)24-17-10-13(7-9-21-17)19-18(15-6-5-14(27-2)11-23-15)20-16(25-19)4-3-8-22-20/h3-11,25H,1-2H3,(H,21,24,26)
J2Y InChIKey InChI 1.03 VRPRBQAJAQCSCW-UHFFFAOYSA-N
J2Y SMILES_CANONICAL CACTVS 3.385 COc1ccc(nc1)c2c([nH]c3cccnc23)c4ccnc(NC(C)=O)c4
J2Y SMILES CACTVS 3.385 COc1ccc(nc1)c2c([nH]c3cccnc23)c4ccnc(NC(C)=O)c4
J2Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(=O)Nc1cc(ccn1)c2c(c3c([nH]2)cccn3)c4ccc(cn4)OC
J2Y SMILES "OpenEye OEToolkits" 2.0.6 CC(=O)Nc1cc(ccn1)c2c(c3c([nH]2)cccn3)c4ccc(cn4)OC
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
J2Y "SYSTEMATIC NAME" ACDLabs 12.01 N-{4-[3-(5-methoxypyridin-2-yl)-1H-pyrrolo[3,2-b]pyridin-2-yl]pyridin-2-yl}acetamide
J2Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[4-[3-(5-methoxypyridin-2-yl)-1~{H}-pyrrolo[3,2-b]pyridin-2-yl]pyridin-2-yl]ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J2Y 'Create component' 2018-08-06 RCSB
J2Y 'Initial release' 2018-10-31 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
J2Y C18 C 9.417 1.400 1
J2Y C16 C 7.483 -0.335 2
J2Y C15 C 10.143 -1.669 3
J2Y C19 C 8.415 2.517 4
J2Y C20 C 6.948 2.207 5
J2Y C21 C 6.482 0.781 6
J2Y C23 C 13.893 -0.370 7
J2Y C11 C 10.143 -4.267 8
J2Y C12 C 11.643 -4.267 9
J2Y C27 C 7.880 5.059 10
J2Y C1 C 5.598 -2.218 11
J2Y C2 C 5.598 -3.718 12
J2Y C3 C 4.299 -4.468 13
J2Y C4 C 3.000 -3.718 14
J2Y C5 C 3.000 -2.218 15
J2Y N6 N 4.299 -1.468 16
J2Y C7 C 7.018 -1.761 17
J2Y C8 C 7.893 -2.968 18
J2Y N9 N 7.018 -4.175 19
J2Y C10 C 9.393 -2.968 20
J2Y N13 N 12.393 -2.968 21
J2Y C14 C 11.643 -1.669 22
J2Y N17 N 8.951 -0.026 23
J2Y N22 N 12.393 -0.370 24
J2Y O24 O 14.643 0.929 25
J2Y C25 C 14.643 -1.669 26
J2Y O26 O 8.881 3.942 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
J2Y N13 C12 DOUBLE NONE 1
J2Y N13 C14 SINGLE NONE 2
J2Y C25 C23 SINGLE NONE 3
J2Y N22 C14 SINGLE NONE 4
J2Y N22 C23 SINGLE NONE 5
J2Y C12 C11 SINGLE NONE 6
J2Y C14 C15 DOUBLE NONE 7
J2Y C23 O24 DOUBLE NONE 8
J2Y C11 C10 DOUBLE NONE 9
J2Y C15 C10 SINGLE NONE 10
J2Y C20 C21 DOUBLE NONE 11
J2Y C20 C19 SINGLE NONE 12
J2Y O26 C27 SINGLE NONE 13
J2Y O26 C19 SINGLE NONE 14
J2Y C10 C8 SINGLE NONE 15
J2Y C21 C16 SINGLE NONE 16
J2Y C19 C18 DOUBLE NONE 17
J2Y C16 C7 SINGLE NONE 18
J2Y C16 N17 DOUBLE NONE 19
J2Y C8 C7 DOUBLE NONE 20
J2Y C8 N9 SINGLE NONE 21
J2Y C18 N17 SINGLE NONE 22
J2Y C7 C1 SINGLE NONE 23
J2Y N9 C2 SINGLE NONE 24
J2Y C1 C2 SINGLE NONE 25
J2Y C1 N6 DOUBLE NONE 26
J2Y C2 C3 DOUBLE NONE 27
J2Y N6 C5 SINGLE NONE 28
J2Y C3 C4 SINGLE NONE 29
J2Y C5 C4 DOUBLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
J2Y MurckoScaffold S1 scaffold 'c1ccc(-c2c(-c3ccncc3)[nH]c3cccnc23)nc1' InChI=1S/C17H12N4/c1-2-8-19-13(4-1)15-16(12-6-10-18-11-7-12)21-14-5-3-9-20-17(14)15/h1-11,21H JIBOWKZUZHQHDF-UHFFFAOYSA-N
J2Y amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
J2Y pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
J2Y pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
J2Y C18 S1 1
J2Y C16 S1 1
J2Y C15 S1 1
J2Y C19 S1 1
J2Y C20 S1 1
J2Y C21 S1 1
J2Y C11 S1 1
J2Y C12 S1 1
J2Y C1 S1 1
J2Y C2 S1 1
J2Y C3 S1 1
J2Y C4 S1 1
J2Y C5 S1 1
J2Y N6 S1 1
J2Y C7 S1 1
J2Y C8 S1 1
J2Y N9 S1 1
J2Y C10 S1 1
J2Y N13 S1 1
J2Y C14 S1 1
J2Y N17 S1 1
J2Y N22 F1 1
J2Y C23 F1 1
J2Y O24 F1 1
J2Y C25 F1 1
J2Y C18 F2 1
J2Y C19 F2 1
J2Y C20 F2 1
J2Y C21 F2 1
J2Y C16 F2 1
J2Y N17 F2 1
J2Y C12 F2 2
J2Y C11 F2 2
J2Y C10 F2 2
J2Y C15 F2 2
J2Y C14 F2 2
J2Y N13 F2 2
J2Y C1 F2 3
J2Y C2 F2 3
J2Y C3 F2 3
J2Y C4 F2 3
J2Y C5 F2 3
J2Y N6 F2 3
J2Y C2 F3 1
J2Y C1 F3 1
J2Y C7 F3 1
J2Y C8 F3 1
J2Y N9 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id J2Y
_pdbe_chem_comp_rdkit_properties.exactmw 359.138
_pdbe_chem_comp_rdkit_properties.amw 359.389
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27
_pdbe_chem_comp_rdkit_properties.NumAtoms 44
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.100
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 179.016
_pdbe_chem_comp_rdkit_properties.tpsa 92.790
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.622
_pdbe_chem_comp_rdkit_properties.CrippenMR 97.127
_pdbe_chem_comp_rdkit_properties.chi0v 13.053
_pdbe_chem_comp_rdkit_properties.chi1v 7.098
_pdbe_chem_comp_rdkit_properties.chi2v 3.252
_pdbe_chem_comp_rdkit_properties.chi3v 3.252
_pdbe_chem_comp_rdkit_properties.chi4v 2.244
_pdbe_chem_comp_rdkit_properties.chi0n 30.053
_pdbe_chem_comp_rdkit_properties.chi1n 15.493
_pdbe_chem_comp_rdkit_properties.chi2n 3.252
_pdbe_chem_comp_rdkit_properties.chi3n 3.252
_pdbe_chem_comp_rdkit_properties.chi4n 2.244
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.740
_pdbe_chem_comp_rdkit_properties.kappa1 6.159
_pdbe_chem_comp_rdkit_properties.kappa2 6.873
_pdbe_chem_comp_rdkit_properties.kappa3 3.221
_pdbe_chem_comp_rdkit_properties.Phi 1.568
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
J2Y UniChem ChEMBL CHEMBL4288634
J2Y UniChem PDBe J2Y
J2Y UniChem SureChEMBL SCHEMBL17840539
J2Y UniChem PubChem 121411739
J2Y UniChem BindingDb 50468183
J2Y UniChem BindingDb 50468187
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
J2Y C18 4.171 -0.632 -0.007 ETKDGv3 1
J2Y C16 1.896 0.132 0.037 ETKDGv3 2
J2Y C15 -2.475 -0.536 -0.248 ETKDGv3 3
J2Y C19 3.893 -1.709 0.754 ETKDGv3 4
J2Y C20 2.508 -1.901 1.229 ETKDGv3 5
J2Y C21 1.555 -1.026 0.897 ETKDGv3 6
J2Y C23 -5.450 -0.924 0.239 ETKDGv3 7
J2Y C11 -0.541 -1.367 -1.474 ETKDGv3 8
J2Y C12 -1.267 -2.641 -1.625 ETKDGv3 9
J2Y C27 6.234 -2.598 0.739 ETKDGv3 10
J2Y C1 1.113 2.575 -0.389 ETKDGv3 11
J2Y C2 -0.139 3.188 -0.701 ETKDGv3 12
J2Y C3 -0.263 4.510 -0.802 ETKDGv3 13
J2Y C4 0.964 5.320 -0.572 ETKDGv3 14
J2Y C5 2.131 4.703 -0.270 ETKDGv3 15
J2Y N6 2.195 3.260 -0.171 ETKDGv3 16
J2Y C7 0.881 1.138 -0.336 ETKDGv3 17
J2Y C8 -0.429 0.944 -0.631 ETKDGv3 18
J2Y N9 -1.126 2.185 -0.850 ETKDGv3 19
J2Y C10 -1.109 -0.359 -0.792 ETKDGv3 20
J2Y N13 -2.463 -2.773 -1.131 ETKDGv3 21
J2Y C14 -3.124 -1.701 -0.434 ETKDGv3 22
J2Y N17 3.129 0.297 -0.351 ETKDGv3 23
J2Y N22 -4.434 -1.931 0.108 ETKDGv3 24
J2Y O24 -5.331 0.189 -0.341 ETKDGv3 25
J2Y C25 -6.707 -1.229 0.986 ETKDGv3 26
J2Y O26 4.863 -2.655 1.121 ETKDGv3 27
J2Y H35 5.170 -0.445 -0.373 ETKDGv3 28
J2Y H34 -2.920 0.262 0.330 ETKDGv3 29
J2Y H36 2.268 -2.748 1.859 ETKDGv3 30
J2Y H37 0.550 -1.159 1.276 ETKDGv3 31
J2Y H32 0.439 -1.261 -1.922 ETKDGv3 32
J2Y H33 -0.806 -3.468 -2.148 ETKDGv3 33
J2Y H42 6.324 -2.635 -0.367 ETKDGv3 34
J2Y H43 6.702 -1.670 1.130 ETKDGv3 35
J2Y H44 6.766 -3.472 1.167 ETKDGv3 36
J2Y H28 -1.213 4.974 -1.035 ETKDGv3 37
J2Y H29 0.920 6.399 -0.644 ETKDGv3 38
J2Y H30 3.023 5.290 -0.100 ETKDGv3 39
J2Y H31 -2.126 2.316 -1.120 ETKDGv3 40
J2Y H38 -4.697 -2.919 0.326 ETKDGv3 41
J2Y H40 -6.475 -1.843 1.881 ETKDGv3 42
J2Y H39 -7.198 -0.290 1.317 ETKDGv3 43
J2Y H41 -7.401 -1.791 0.327 ETKDGv3 44
#