data_J34
#
_chem_comp.id J34
_chem_comp.name
"N-{[(1S)-1-carboxy-5-({[2-({4,44-dioxo-48-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-7,10,13,16,19,22,25,28,31,34,37,40-dodecaoxa-3,43-diazaoctatetracont-1-yl}oxy)phenyl]carbamoyl}amino)pentyl]carbamoyl}-L-glutamic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C58 H98 N8 O24 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-12-11
_chem_comp.pdbx_modified_date 2014-06-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 1323.503
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code J34
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4NGS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J34 O23 O23 O 0 1 N N N N N N -30.872 -14.419 -0.120 18.032 -2.681 -2.753 O23 J34 1
J34 C12 C12 C 0 1 N N N N N N -30.043 -14.034 0.704 17.020 -2.256 -2.229 C12 J34 2
J34 N2 N2 N 0 1 N N N N N N -28.952 -14.829 0.714 16.989 -0.998 -1.746 N2 J34 3
J34 C11 C11 C 0 1 N N N N N N -27.625 -14.574 1.223 18.174 -0.144 -1.852 C11 J34 4
J34 C10 C10 C 0 1 N N N N N N -27.024 -13.306 0.628 17.874 1.223 -1.232 C10 J34 5
J34 C9 C9 C 0 1 N N N N N N -25.954 -12.726 1.545 19.111 2.116 -1.343 C9 J34 6
J34 C8 C8 C 0 1 N N N N N N -26.021 -11.204 1.569 18.812 3.482 -0.723 C8 J34 7
J34 C1 C1 C 0 1 N N S N N N -24.684 -10.605 1.991 20.049 4.375 -0.834 C1 J34 8
J34 N N N 0 1 N N N N N N -24.092 -11.407 3.043 21.132 3.811 -0.024 N J34 9
J34 C2 C2 C 0 1 N N N N N N -24.600 -11.427 4.272 22.416 4.089 -0.329 C2 J34 10
J34 O6 O6 O 0 1 N N N N N N -25.586 -10.766 4.554 22.674 4.807 -1.275 O6 J34 11
J34 N1 N1 N 0 1 N N N N N N -24.001 -12.187 5.184 23.412 3.570 0.416 N1 J34 12
J34 C3 C3 C 0 1 N N S N N N -24.491 -12.265 6.546 24.807 3.872 0.085 C3 J34 13
J34 C7 C7 C 0 1 N N N N N N -23.585 -13.090 7.412 25.292 2.912 -0.971 C7 J34 14
J34 O5 O5 O 0 1 N N N N N N -22.811 -13.891 6.917 24.548 2.064 -1.404 O5 J34 15
J34 O4 O4 O 0 1 N N N N N N -23.619 -12.954 8.735 26.549 3.001 -1.432 O4 J34 16
J34 C4 C4 C 0 1 N N N N N N -25.893 -12.863 6.562 25.671 3.728 1.339 C4 J34 17
J34 C5 C5 C 0 1 N N N N N N -26.382 -13.068 7.991 25.260 4.786 2.365 C5 J34 18
J34 C6 C6 C 0 1 N N N N N N -27.801 -13.584 7.975 26.112 4.644 3.601 C6 J34 19
J34 O3 O3 O 0 1 N N N N N N -28.742 -12.808 7.957 26.960 3.786 3.655 O3 J34 20
J34 O2 O2 O 0 1 N N N N N N -28.044 -14.892 7.978 25.928 5.473 4.641 O2 J34 21
J34 C C C 0 1 N N N N N N -24.889 -9.185 2.427 19.717 5.758 -0.335 C J34 22
J34 O1 O1 O 0 1 N N N N N N -25.800 -8.894 3.351 18.748 6.471 -0.930 O1 J34 23
J34 O O O 0 1 N N N N N N -24.225 -8.283 1.943 20.323 6.224 0.600 O J34 24
J34 N3 N3 N 0 1 N N N N N N -30.389 -12.894 1.386 15.928 -3.041 -2.136 N3 J34 25
J34 C13 C13 C 0 1 Y N N N N N -29.922 -12.181 2.483 15.918 -4.303 -2.747 C13 J34 26
J34 C18 C18 C 0 1 Y N N N N N -30.736 -10.976 2.869 15.074 -5.303 -2.270 C18 J34 27
J34 C17 C17 C 0 1 Y N N N N N -30.375 -10.166 3.936 15.068 -6.548 -2.877 C17 J34 28
J34 C16 C16 C 0 1 Y N N N N N -29.248 -10.456 4.681 15.899 -6.796 -3.954 C16 J34 29
J34 C15 C15 C 0 1 Y N N N N N -28.478 -11.561 4.359 16.738 -5.804 -4.427 C15 J34 30
J34 C14 C14 C 0 1 Y N N N N N -28.799 -12.403 3.298 16.745 -4.557 -3.831 C14 J34 31
J34 O7 O7 O 0 1 N N N N N N -31.868 -10.620 2.180 14.258 -5.057 -1.210 O7 J34 32
J34 C19 C19 C 0 1 N N N N N N -31.857 -9.470 1.337 13.419 -6.129 -0.775 C19 J34 33
J34 C20 C20 C 0 1 N N N N N N -33.250 -8.851 1.294 12.579 -5.668 0.418 C20 J34 34
J34 N4 N4 N 0 1 N N N N N N -33.249 -7.487 1.785 11.663 -4.609 -0.011 N4 J34 35
J34 C21 C21 C 0 1 N N N N N N -32.375 -6.589 1.341 10.820 -4.047 0.878 C21 J34 36
J34 O22 O22 O 0 1 N N N N N N -31.527 -6.845 0.502 10.820 -4.418 2.033 O22 J34 37
J34 C22 C22 C 0 1 N N N N N N -32.476 -5.202 1.929 9.877 -2.957 0.438 C22 J34 38
J34 C23 C23 C 0 1 N N N N N N -31.144 -4.479 1.774 9.037 -2.496 1.630 C23 J34 39
J34 O8 O8 O 0 1 N N N N N N -31.351 -3.069 1.837 8.143 -1.462 1.213 O8 J34 40
J34 C24 C24 C 0 1 N N N N N N -30.128 -2.363 2.032 7.308 -0.959 2.257 C24 J34 41
J34 C25 C25 C 0 1 N N N N N N -30.418 -0.883 2.258 6.398 0.137 1.699 C25 J34 42
J34 O9 O9 O 0 1 N N N N N N -29.215 -0.130 2.120 5.503 -0.430 0.740 O9 J34 43
J34 C26 C26 C 0 1 N N N N N N -29.470 1.272 2.070 4.604 0.513 0.154 C26 J34 44
J34 C27 C27 C 0 1 N N N N N N -28.152 2.036 2.066 3.698 -0.201 -0.851 C27 J34 45
J34 O10 O10 O 0 1 N N N N N N -28.400 3.424 1.856 2.867 -1.137 -0.162 O10 J34 46
J34 C28 C28 C 0 1 N N N N N N -27.233 4.211 2.085 1.978 -1.862 -1.014 C28 J34 47
J34 C29 C29 C 0 1 N N N N N N -27.614 5.685 2.168 1.142 -2.829 -0.174 C29 J34 48
J34 O11 O11 O 0 1 N N N N N N -26.437 6.489 2.146 0.299 -2.087 0.709 O11 J34 49
J34 C30 C30 C 0 1 N N N N N N -26.747 7.881 2.119 -0.529 -2.901 1.543 C30 J34 50
J34 C31 C31 C 0 1 N N N N N N -25.460 8.696 2.172 -1.384 -2.005 2.442 C31 J34 51
J34 O12 O12 O 0 1 N N N N N N -25.773 10.083 2.272 -2.289 -1.247 1.636 O12 J34 52
J34 C32 C32 C 0 1 N N N N N N -24.605 10.898 2.187 -3.139 -0.374 2.382 C32 J34 53
J34 C33 C33 C 0 1 N N N N N N -25.006 12.367 2.143 -4.060 0.383 1.423 C33 J34 54
J34 O13 O13 O 0 1 N N N N N N -23.839 13.186 2.169 -4.939 -0.541 0.779 O13 J34 55
J34 C34 C34 C 0 1 N N N N N N -24.166 14.574 2.167 -5.847 0.066 -0.144 C34 J34 56
J34 C35 C35 C 0 1 N N N N N N -22.889 15.406 2.183 -6.734 -1.011 -0.770 C35 J34 57
J34 O14 O14 O 0 1 N N N N N N -23.220 16.793 2.176 -7.558 -1.597 0.241 O14 J34 58
J34 C36 C36 C 0 1 N N N N N N -22.055 17.616 2.192 -8.430 -2.621 -0.242 C36 J34 59
J34 C37 C37 C 0 1 N N N N N N -22.464 19.084 2.183 -9.259 -3.173 0.920 C37 J34 60
J34 O15 O15 O 0 1 N N N N N N -21.302 19.910 2.199 -10.120 -2.148 1.420 O15 J34 61
J34 C38 C38 C 0 1 N N N N N N -21.638 21.295 2.193 -10.943 -2.562 2.513 C38 J34 62
J34 C39 C39 C 0 1 N N N N N N -20.367 22.135 2.208 -11.817 -1.391 2.965 C39 J34 63
J34 O16 O16 O 0 1 N N N N N N -20.707 23.520 2.198 -12.726 -1.043 1.918 O16 J34 64
J34 C40 C40 C 0 1 N N N N N N -19.548 24.352 2.215 -13.594 0.045 2.240 C40 J34 65
J34 C41 C41 C 0 1 N N N N N N -19.968 25.817 2.208 -14.518 0.329 1.053 C41 J34 66
J34 O17 O17 O 0 1 N N N N N N -18.811 26.650 2.214 -15.379 -0.792 0.842 O17 J34 67
J34 C42 C42 C 0 1 N N N N N N -19.157 28.034 2.209 -16.288 -0.629 -0.249 C42 J34 68
J34 C43 C43 C 0 1 N N N N N N -17.891 28.882 2.220 -17.155 -1.883 -0.381 C43 J34 69
J34 O18 O18 O 0 1 N N N N N N -18.239 30.265 2.256 -17.979 -2.016 0.779 O18 J34 70
J34 C44 C44 C 0 1 N N N N N N -17.089 31.104 2.185 -18.833 -3.162 0.757 C44 J34 71
J34 C45 C45 C 0 1 N N N N N N -17.519 32.566 2.171 -19.664 -3.204 2.041 C45 J34 72
J34 O19 O19 O 0 1 N N N N N N -16.368 33.407 2.183 -20.542 -2.077 2.077 O19 J34 73
J34 C46 C46 C 0 1 N N N N N N -16.722 34.787 2.239 -21.368 -2.021 3.242 C46 J34 74
J34 C47 C47 C 0 1 N N N N N N -15.465 35.635 2.398 -22.262 -0.781 3.174 C47 J34 75
J34 N5 N5 N 0 1 N N N N N N -15.709 37.027 2.070 -23.190 -0.910 2.048 N5 J34 76
J34 C48 C48 C 0 1 N N N N N N -16.707 37.707 2.627 -24.079 0.070 1.792 C48 J34 77
J34 O21 O21 O 0 1 N N N N N N -17.474 37.217 3.439 -24.111 1.058 2.494 O21 J34 78
J34 C49 C49 C 0 1 N N N N N N -16.857 39.149 2.203 -25.034 -0.063 0.633 C49 J34 79
J34 C50 C50 C 0 1 N N N N N N -18.336 39.501 2.092 -25.928 1.177 0.565 C50 J34 80
J34 C51 C51 C 0 1 N N N N N N -18.523 40.983 1.791 -26.897 1.042 -0.611 C51 J34 81
J34 C52 C52 C 0 1 N N N N N N -20.001 41.330 1.656 -27.792 2.282 -0.680 C52 J34 82
J34 C53 C53 C 0 1 N N S N N N -20.321 42.643 2.365 -28.761 2.147 -1.856 C53 J34 83
J34 C56 C56 C 0 1 N N S N N N -21.806 43.018 2.319 -29.759 3.321 -1.878 C56 J34 84
J34 C55 C55 C 0 1 N N R N N N -22.406 43.226 3.721 -30.090 3.780 -3.304 C55 J34 85
J34 C54 C54 C 0 1 N N N N N N -21.408 42.960 4.847 -29.344 2.957 -4.373 C54 J34 86
J34 S S S 0 1 N N N N N N -19.896 42.527 4.067 -27.875 2.339 -3.456 S J34 87
J34 N7 N7 N 0 1 N N N N N N -22.651 41.966 1.781 -29.133 4.501 -1.261 N7 J34 88
J34 C57 C57 C 0 1 N N N N N N -23.596 41.566 2.620 -29.095 5.495 -2.158 C57 J34 89
J34 O20 O20 O 0 1 N N N N N N -24.426 40.700 2.396 -28.628 6.591 -1.914 O20 J34 90
J34 N6 N6 N 0 1 N N N N N N -23.492 42.262 3.743 -29.618 5.172 -3.349 N6 J34 91
J34 H22 H22 H 0 1 N N N N N N -29.083 -15.733 0.307 16.182 -0.659 -1.328 H22 J34 92
J34 H20 H20 H 0 1 N N N N N N -27.678 -14.464 2.316 19.006 -0.608 -1.323 H20 J34 93
J34 H21 H21 H 0 1 N N N N N N -26.977 -15.427 0.972 18.437 -0.016 -2.902 H21 J34 94
J34 H18 H18 H 0 1 N N N N N N -26.572 -13.545 -0.346 17.042 1.687 -1.761 H18 J34 95
J34 H19 H19 H 0 1 N N N N N N -27.821 -12.561 0.489 17.611 1.095 -0.182 H19 J34 96
J34 H16 H16 H 0 1 N N N N N N -26.108 -13.109 2.565 19.943 1.651 -0.814 H16 J34 97
J34 H17 H17 H 0 1 N N N N N N -24.963 -13.037 1.183 19.375 2.243 -2.393 H17 J34 98
J34 H14 H14 H 0 1 N N N N N N -26.277 -10.839 0.563 17.980 3.947 -1.252 H14 J34 99
J34 H15 H15 H 0 1 N N N N N N -26.797 -10.889 2.282 18.549 3.354 0.327 H15 J34 100
J34 H H H 0 1 N N N N N N -24.016 -10.608 1.117 20.365 4.430 -1.875 H J34 101
J34 H6 H6 H 0 1 N N N N N N -23.283 -11.958 2.840 20.926 3.238 0.730 H6 J34 102
J34 H7 H7 H 0 1 N N N N N N -23.194 -12.717 4.924 23.206 2.997 1.171 H7 J34 103
J34 H1 H1 H 0 1 N N N N N N -24.546 -11.250 6.968 24.879 4.892 -0.291 H1 J34 104
J34 H13 H13 H 0 1 N N N N N N -22.989 -13.544 9.131 26.814 2.364 -2.110 H13 J34 105
J34 H8 H8 H 0 1 N N N N N N -26.581 -12.181 6.040 25.531 2.735 1.765 H8 J34 106
J34 H9 H9 H 0 1 N N N N N N -25.876 -13.834 6.045 26.720 3.865 1.076 H9 J34 107
J34 H10 H10 H 0 1 N N N N N N -25.733 -13.798 8.498 25.401 5.779 1.939 H10 J34 108
J34 H11 H11 H 0 1 N N N N N N -26.348 -12.110 8.530 24.212 4.649 2.629 H11 J34 109
J34 H12 H12 H 0 1 N N N N N N -28.982 -15.040 7.965 26.498 5.343 5.412 H12 J34 110
J34 H5 H5 H 0 1 N N N N N N -25.801 -7.958 3.511 18.571 7.353 -0.575 H5 J34 111
J34 H23 H23 H 0 1 N N N N N N -31.195 -12.459 0.985 15.149 -2.733 -1.647 H23 J34 112
J34 H27 H27 H 0 1 N N N N N N -30.977 -9.305 4.185 14.415 -7.325 -2.509 H27 J34 113
J34 H26 H26 H 0 1 N N N N N N -28.969 -9.824 5.511 15.894 -7.768 -4.425 H26 J34 114
J34 H25 H25 H 0 1 N N N N N N -27.600 -11.776 4.950 17.386 -6.003 -5.268 H25 J34 115
J34 H24 H24 H 0 1 N N N N N N -28.165 -13.253 3.095 17.397 -3.783 -4.207 H24 J34 116
J34 H28 H28 H 0 1 N N N N N N -31.142 -8.734 1.732 12.759 -6.428 -1.590 H28 J34 117
J34 H29 H29 H 0 1 N N N N N N -31.556 -9.764 0.321 14.037 -6.977 -0.479 H29 J34 118
J34 H30 H30 H 0 1 N N N N N N -33.609 -8.855 0.254 12.005 -6.510 0.805 H30 J34 119
J34 H31 H31 H 0 1 N N N N N N -33.927 -9.453 1.918 13.236 -5.286 1.199 H31 J34 120
J34 H32 H32 H 0 1 N N N N N N -33.921 -7.215 2.474 11.663 -4.312 -0.934 H32 J34 121
J34 H33 H33 H 0 1 N N N N N N -33.261 -4.639 1.403 10.451 -2.115 0.050 H33 J34 122
J34 H34 H34 H 0 1 N N N N N N -32.730 -5.275 2.997 9.220 -3.339 -0.344 H34 J34 123
J34 H35 H35 H 0 1 N N N N N N -30.466 -4.785 2.584 8.464 -3.338 2.018 H35 J34 124
J34 H36 H36 H 0 1 N N N N N N -30.697 -4.740 0.803 9.694 -2.114 2.411 H36 J34 125
J34 H37 H37 H 0 1 N N N N N N -29.606 -2.771 2.910 6.699 -1.769 2.658 H37 J34 126
J34 H38 H38 H 0 1 N N N N N N -29.493 -2.479 1.141 7.930 -0.545 3.051 H38 J34 127
J34 H39 H39 H 0 1 N N N N N N -31.153 -0.537 1.516 5.825 0.582 2.512 H39 J34 128
J34 H40 H40 H 0 1 N N N N N N -30.824 -0.741 3.270 7.005 0.905 1.219 H40 J34 129
J34 H41 H41 H 0 1 N N N N N N -30.032 1.509 1.155 3.993 0.967 0.935 H41 J34 130
J34 H42 H42 H 0 1 N N N N N N -30.061 1.567 2.950 5.174 1.289 -0.357 H42 J34 131
J34 H43 H43 H 0 1 N N N N N N -27.646 1.897 3.033 3.074 0.532 -1.362 H43 J34 132
J34 H44 H44 H 0 1 N N N N N N -27.510 1.653 1.259 4.311 -0.728 -1.582 H44 J34 133
J34 H45 H45 H 0 1 N N N N N N -26.763 3.901 3.030 1.318 -1.163 -1.528 H45 J34 134
J34 H46 H46 H 0 1 N N N N N N -26.524 4.063 1.257 2.556 -2.424 -1.748 H46 J34 135
J34 H47 H47 H 0 1 N N N N N N -28.251 5.947 1.310 0.528 -3.444 -0.832 H47 J34 136
J34 H48 H48 H 0 1 N N N N N N -28.164 5.868 3.103 1.804 -3.470 0.409 H48 J34 137
J34 H49 H49 H 0 1 N N N N N N -27.291 8.116 1.192 -1.178 -3.517 0.921 H49 J34 138
J34 H50 H50 H 0 1 N N N N N N -27.375 8.133 2.986 0.099 -3.543 2.162 H50 J34 139
J34 H51 H51 H 0 1 N N N N N N -24.870 8.390 3.048 -1.949 -2.624 3.139 H51 J34 140
J34 H52 H52 H 0 1 N N N N N N -24.877 8.518 1.257 -0.738 -1.327 2.999 H52 J34 141
J34 H53 H53 H 0 1 N N N N N N -23.969 10.719 3.067 -3.740 -0.959 3.078 H53 J34 142
J34 H54 H54 H 0 1 N N N N N N -24.047 10.644 1.274 -2.530 0.339 2.938 H54 J34 143
J34 H55 H55 H 0 1 N N N N N N -25.570 12.564 1.220 -4.646 1.113 1.981 H55 J34 144
J34 H56 H56 H 0 1 N N N N N N -25.636 12.600 3.014 -3.460 0.897 0.672 H56 J34 145
J34 H57 H57 H 0 1 N N N N N N -24.745 14.811 1.262 -6.470 0.789 0.383 H57 J34 146
J34 H58 H58 H 0 1 N N N N N N -24.766 14.809 3.059 -5.284 0.573 -0.927 H58 J34 147
J34 H59 H59 H 0 1 N N N N N N -22.311 15.172 3.090 -7.365 -0.562 -1.537 H59 J34 148
J34 H60 H60 H 0 1 N N N N N N -22.287 15.169 1.293 -6.108 -1.782 -1.220 H60 J34 149
J34 H61 H61 H 0 1 N N N N N N -21.470 17.405 3.099 -9.096 -2.204 -0.998 H61 J34 150
J34 H62 H62 H 0 1 N N N N N N -21.443 17.401 1.303 -7.839 -3.424 -0.681 H62 J34 151
J34 H63 H63 H 0 1 N N N N N N -23.049 19.294 1.275 -9.860 -4.013 0.570 H63 J34 152
J34 H64 H64 H 0 1 N N N N N N -23.076 19.298 3.072 -8.593 -3.508 1.714 H64 J34 153
J34 H65 H65 H 0 1 N N N N N N -22.218 21.526 1.287 -11.578 -3.389 2.197 H65 J34 154
J34 H66 H66 H 0 1 N N N N N N -22.240 21.528 3.083 -10.311 -2.885 3.341 H66 J34 155
J34 H67 H67 H 0 1 N N N N N N -19.788 21.907 3.115 -12.380 -1.679 3.853 H67 J34 156
J34 H68 H68 H 0 1 N N N N N N -19.763 21.900 1.319 -11.186 -0.534 3.197 H68 J34 157
J34 H69 H69 H 0 1 N N N N N N -18.962 24.144 3.122 -14.193 -0.213 3.113 H69 J34 158
J34 H70 H70 H 0 1 N N N N N N -18.935 24.143 1.326 -12.999 0.933 2.457 H70 J34 159
J34 H71 H71 H 0 1 N N N N N N -20.562 26.023 1.305 -15.118 1.214 1.263 H71 J34 160
J34 H72 H72 H 0 1 N N N N N N -20.574 26.028 3.101 -13.919 0.500 0.159 H72 J34 161
J34 H73 H73 H 0 1 N N N N N N -19.741 28.261 1.305 -16.924 0.236 -0.066 H73 J34 162
J34 H74 H74 H 0 1 N N N N N N -19.758 28.263 3.101 -15.725 -0.478 -1.170 H74 J34 163
J34 H75 H75 H 0 1 N N N N N N -17.292 28.633 3.108 -17.786 -1.796 -1.266 H75 J34 164
J34 H76 H76 H 0 1 N N N N N N -17.305 28.676 1.312 -16.515 -2.760 -0.475 H76 J34 165
J34 H77 H77 H 0 1 N N N N N N -16.448 30.920 3.060 -19.498 -3.102 -0.104 H77 J34 166
J34 H78 H78 H 0 1 N N N N N N -16.529 30.879 1.266 -18.227 -4.065 0.686 H78 J34 167
J34 H79 H79 H 0 1 N N N N N N -18.108 32.765 1.263 -20.250 -4.122 2.065 H79 J34 168
J34 H80 H80 H 0 1 N N N N N N -18.133 32.775 3.059 -18.999 -3.174 2.905 H80 J34 169
J34 H81 H81 H 0 1 N N N N N N -17.239 35.070 1.310 -21.989 -2.915 3.291 H81 J34 170
J34 H82 H82 H 0 1 N N N N N N -17.389 34.959 3.096 -20.739 -1.966 4.131 H82 J34 171
J34 H83 H83 H 0 1 N N N N N N -15.121 35.570 3.441 -22.827 -0.689 4.102 H83 J34 172
J34 H84 H84 H 0 1 N N N N N N -14.684 35.243 1.729 -21.644 0.106 3.036 H84 J34 173
J34 H85 H85 H 0 1 N N N N N N -15.113 37.485 1.410 -23.164 -1.701 1.486 H85 J34 174
J34 H86 H86 H 0 1 N N N N N N -16.381 39.801 2.950 -24.469 -0.154 -0.294 H86 J34 175
J34 H87 H87 H 0 1 N N N N N N -16.372 39.295 1.227 -25.652 -0.950 0.771 H87 J34 176
J34 H88 H88 H 0 1 N N N N N N -18.787 38.910 1.281 -26.493 1.268 1.492 H88 J34 177
J34 H89 H89 H 0 1 N N N N N N -18.835 39.261 3.042 -25.310 2.064 0.427 H89 J34 178
J34 H90 H90 H 0 1 N N N N N N -18.088 41.574 2.610 -26.332 0.950 -1.539 H90 J34 179
J34 H91 H91 H 0 1 N N N N N N -18.009 41.227 0.850 -27.515 0.155 -0.473 H91 J34 180
J34 H92 H92 H 0 1 N N N N N N -20.252 41.427 0.589 -28.357 2.373 0.248 H92 J34 181
J34 H93 H93 H 0 1 N N N N N N -20.602 40.524 2.103 -27.174 3.169 -0.818 H93 J34 182
J34 H2 H2 H 0 1 N N N N N N -19.718 43.456 1.935 -29.287 1.193 -1.814 H2 J34 183
J34 H4 H4 H 0 1 N N N N N N -21.928 43.942 1.734 -30.672 3.050 -1.348 H4 J34 184
J34 H3 H3 H 0 1 N N N N N N -22.794 44.252 3.806 -31.165 3.734 -3.475 H3 J34 185
J34 H95 H95 H 0 1 N N N N N N -21.276 43.863 5.461 -29.960 2.127 -4.721 H95 J34 186
J34 H94 H94 H 0 1 N N N N N N -21.760 42.134 5.482 -29.041 3.590 -5.206 H94 J34 187
J34 H97 H97 H 0 1 N N N N N N -22.531 41.581 0.866 -28.803 4.551 -0.350 H97 J34 188
J34 H96 H96 H 0 1 N N N N N N -24.100 42.136 4.527 -29.677 5.762 -4.117 H96 J34 189
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J34 O23 C12 DOUB N N 1
J34 C12 N2 SING N N 2
J34 C12 N3 SING N N 3
J34 N2 C11 SING N N 4
J34 C11 C10 SING N N 5
J34 C10 C9 SING N N 6
J34 C9 C8 SING N N 7
J34 C8 C1 SING N N 8
J34 C1 N SING N N 9
J34 C1 C SING N N 10
J34 N C2 SING N N 11
J34 C2 O6 DOUB N N 12
J34 C2 N1 SING N N 13
J34 N1 C3 SING N N 14
J34 C3 C7 SING N N 15
J34 C3 C4 SING N N 16
J34 C7 O5 DOUB N N 17
J34 C7 O4 SING N N 18
J34 C4 C5 SING N N 19
J34 C5 C6 SING N N 20
J34 C6 O3 DOUB N N 21
J34 C6 O2 SING N N 22
J34 C O1 SING N N 23
J34 C O DOUB N N 24
J34 N3 C13 SING N N 25
J34 C13 C18 DOUB Y N 26
J34 C13 C14 SING Y N 27
J34 C18 C17 SING Y N 28
J34 C18 O7 SING N N 29
J34 C17 C16 DOUB Y N 30
J34 C16 C15 SING Y N 31
J34 C15 C14 DOUB Y N 32
J34 O7 C19 SING N N 33
J34 C19 C20 SING N N 34
J34 C20 N4 SING N N 35
J34 N4 C21 SING N N 36
J34 C21 O22 DOUB N N 37
J34 C21 C22 SING N N 38
J34 C22 C23 SING N N 39
J34 C23 O8 SING N N 40
J34 O8 C24 SING N N 41
J34 C24 C25 SING N N 42
J34 C25 O9 SING N N 43
J34 O9 C26 SING N N 44
J34 C26 C27 SING N N 45
J34 C27 O10 SING N N 46
J34 O10 C28 SING N N 47
J34 C28 C29 SING N N 48
J34 C29 O11 SING N N 49
J34 O11 C30 SING N N 50
J34 C30 C31 SING N N 51
J34 C31 O12 SING N N 52
J34 O12 C32 SING N N 53
J34 C32 C33 SING N N 54
J34 C33 O13 SING N N 55
J34 O13 C34 SING N N 56
J34 C34 C35 SING N N 57
J34 C35 O14 SING N N 58
J34 O14 C36 SING N N 59
J34 C36 C37 SING N N 60
J34 C37 O15 SING N N 61
J34 O15 C38 SING N N 62
J34 C38 C39 SING N N 63
J34 C39 O16 SING N N 64
J34 O16 C40 SING N N 65
J34 C40 C41 SING N N 66
J34 C41 O17 SING N N 67
J34 O17 C42 SING N N 68
J34 C42 C43 SING N N 69
J34 C43 O18 SING N N 70
J34 O18 C44 SING N N 71
J34 C44 C45 SING N N 72
J34 C45 O19 SING N N 73
J34 O19 C46 SING N N 74
J34 C46 C47 SING N N 75
J34 C47 N5 SING N N 76
J34 N5 C48 SING N N 77
J34 C48 O21 DOUB N N 78
J34 C48 C49 SING N N 79
J34 C49 C50 SING N N 80
J34 C50 C51 SING N N 81
J34 C51 C52 SING N N 82
J34 C52 C53 SING N N 83
J34 C53 C56 SING N N 84
J34 C53 S SING N N 85
J34 C56 C55 SING N N 86
J34 C56 N7 SING N N 87
J34 C55 C54 SING N N 88
J34 C55 N6 SING N N 89
J34 C54 S SING N N 90
J34 N7 C57 SING N N 91
J34 C57 O20 DOUB N N 92
J34 C57 N6 SING N N 93
J34 N2 H22 SING N N 94
J34 C11 H20 SING N N 95
J34 C11 H21 SING N N 96
J34 C10 H18 SING N N 97
J34 C10 H19 SING N N 98
J34 C9 H16 SING N N 99
J34 C9 H17 SING N N 100
J34 C8 H14 SING N N 101
J34 C8 H15 SING N N 102
J34 C1 H SING N N 103
J34 N H6 SING N N 104
J34 N1 H7 SING N N 105
J34 C3 H1 SING N N 106
J34 O4 H13 SING N N 107
J34 C4 H8 SING N N 108
J34 C4 H9 SING N N 109
J34 C5 H10 SING N N 110
J34 C5 H11 SING N N 111
J34 O2 H12 SING N N 112
J34 O1 H5 SING N N 113
J34 N3 H23 SING N N 114
J34 C17 H27 SING N N 115
J34 C16 H26 SING N N 116
J34 C15 H25 SING N N 117
J34 C14 H24 SING N N 118
J34 C19 H28 SING N N 119
J34 C19 H29 SING N N 120
J34 C20 H30 SING N N 121
J34 C20 H31 SING N N 122
J34 N4 H32 SING N N 123
J34 C22 H33 SING N N 124
J34 C22 H34 SING N N 125
J34 C23 H35 SING N N 126
J34 C23 H36 SING N N 127
J34 C24 H37 SING N N 128
J34 C24 H38 SING N N 129
J34 C25 H39 SING N N 130
J34 C25 H40 SING N N 131
J34 C26 H41 SING N N 132
J34 C26 H42 SING N N 133
J34 C27 H43 SING N N 134
J34 C27 H44 SING N N 135
J34 C28 H45 SING N N 136
J34 C28 H46 SING N N 137
J34 C29 H47 SING N N 138
J34 C29 H48 SING N N 139
J34 C30 H49 SING N N 140
J34 C30 H50 SING N N 141
J34 C31 H51 SING N N 142
J34 C31 H52 SING N N 143
J34 C32 H53 SING N N 144
J34 C32 H54 SING N N 145
J34 C33 H55 SING N N 146
J34 C33 H56 SING N N 147
J34 C34 H57 SING N N 148
J34 C34 H58 SING N N 149
J34 C35 H59 SING N N 150
J34 C35 H60 SING N N 151
J34 C36 H61 SING N N 152
J34 C36 H62 SING N N 153
J34 C37 H63 SING N N 154
J34 C37 H64 SING N N 155
J34 C38 H65 SING N N 156
J34 C38 H66 SING N N 157
J34 C39 H67 SING N N 158
J34 C39 H68 SING N N 159
J34 C40 H69 SING N N 160
J34 C40 H70 SING N N 161
J34 C41 H71 SING N N 162
J34 C41 H72 SING N N 163
J34 C42 H73 SING N N 164
J34 C42 H74 SING N N 165
J34 C43 H75 SING N N 166
J34 C43 H76 SING N N 167
J34 C44 H77 SING N N 168
J34 C44 H78 SING N N 169
J34 C45 H79 SING N N 170
J34 C45 H80 SING N N 171
J34 C46 H81 SING N N 172
J34 C46 H82 SING N N 173
J34 C47 H83 SING N N 174
J34 C47 H84 SING N N 175
J34 N5 H85 SING N N 176
J34 C49 H86 SING N N 177
J34 C49 H87 SING N N 178
J34 C50 H88 SING N N 179
J34 C50 H89 SING N N 180
J34 C51 H90 SING N N 181
J34 C51 H91 SING N N 182
J34 C52 H92 SING N N 183
J34 C52 H93 SING N N 184
J34 C53 H2 SING N N 185
J34 C56 H4 SING N N 186
J34 C55 H3 SING N N 187
J34 C54 H95 SING N N 188
J34 C54 H94 SING N N 189
J34 N7 H97 SING N N 190
J34 N6 H96 SING N N 191
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J34 SMILES ACDLabs 12.01 O=C(O)C(NC(=O)NC(C(=O)O)CCCCNC(=O)Nc3ccccc3OCCNC(=O)CCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCCCC1SCC2NC(=O)NC12)CCC(=O)O
J34 InChI InChI 1.03 InChI=1S/C58H98N8O24S/c67-50(11-4-3-10-49-53-47(43-91-49)65-58(77)66-53)59-16-19-79-22-24-81-26-28-83-30-32-85-34-36-87-38-40-89-42-41-88-39-37-86-35-33-84-31-29-82-27-25-80-23-21-78-18-14-51(68)60-17-20-90-48-9-2-1-7-44(48)62-56(75)61-15-6-5-8-45(54(71)72)63-57(76)64-46(55(73)74)12-13-52(69)70/h1-2,7,9,45-47,49,53H,3-6,8,10-43H2,(H,59,67)(H,60,68)(H,69,70)(H,71,72)(H,73,74)(H2,61,62,75)(H2,63,64,76)(H2,65,66,77)/t45-,46-,47-,49-,53-/m0/s1
J34 InChIKey InChI 1.03 XRZNULQNCHFEIW-HJXABITDSA-N
J34 SMILES_CANONICAL CACTVS 3.385 OC(=O)CC[C@H](NC(=O)N[C@@H](CCCCNC(=O)Nc1ccccc1OCCNC(=O)CCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCCC[C@@H]2SC[C@@H]3NC(=O)N[C@H]23)C(O)=O)C(O)=O
J34 SMILES CACTVS 3.385 OC(=O)CC[CH](NC(=O)N[CH](CCCCNC(=O)Nc1ccccc1OCCNC(=O)CCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCCC[CH]2SC[CH]3NC(=O)N[CH]23)C(O)=O)C(O)=O
J34 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 c1ccc(c(c1)NC(=O)NCCCC[C@@H](C(=O)O)NC(=O)N[C@@H](CCC(=O)O)C(=O)O)OCCNC(=O)CCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCCC[C@H]2[C@@H]3[C@H](CS2)NC(=O)N3
J34 SMILES "OpenEye OEToolkits" 1.7.6 c1ccc(c(c1)NC(=O)NCCCCC(C(=O)O)NC(=O)NC(CCC(=O)O)C(=O)O)OCCNC(=O)CCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCCCC2C3C(CS2)NC(=O)N3
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
J34 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{[(1S)-1-carboxy-5-({[2-({4,44-dioxo-48-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-7,10,13,16,19,22,25,28,31,34,37,40-dodecaoxa-3,43-diazaoctatetracont-1-yl}oxy)phenyl]carbamoyl}amino)pentyl]carbamoyl}-L-glutamic acid"
J34 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-[[(2S)-6-[[2-[2-[3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoylamino]ethoxy]phenyl]carbamoylamino]-1-oxidanyl-1-oxidanylidene-hexan-2-yl]carbamoylamino]pentanedioic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J34 'Create component' 2013-12-11 PDBJ
J34 'Initial release' 2014-06-18 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
J34 O23 O 10.060 19.125 1
J34 C12 C 11.528 18.815 2
J34 N2 N 11.994 17.389 3
J34 C11 C 10.992 16.273 4
J34 C10 C 11.458 14.847 5
J34 C9 C 10.456 13.731 6
J34 C8 C 10.922 12.305 7
J34 C1 C 9.921 11.188 8
J34 N N 10.387 9.763 9
J34 C2 C 9.385 8.646 10
J34 O6 O 7.917 8.956 11
J34 N1 N 9.851 7.220 12
J34 C3 C 8.849 6.104 13
J34 C7 C 9.315 4.678 14
J34 O5 O 8.313 3.562 15
J34 O4 O 10.783 4.369 16
J34 C4 C 7.381 6.413 17
J34 C5 C 6.380 5.297 18
J34 C6 C 4.912 5.606 19
J34 O3 O 3.910 4.490 20
J34 O2 O 4.446 7.032 21
J34 C C 8.453 11.498 22
J34 O1 O 7.451 10.381 23
J34 O O 7.987 12.924 24
J34 N3 N 12.530 19.931 25
J34 C13 C 12.064 21.358 26
J34 C18 C 13.066 22.474 27
J34 C17 C 12.599 23.900 28
J34 C16 C 11.132 24.209 29
J34 C15 C 10.130 23.093 30
J34 C14 C 10.596 21.667 31
J34 O7 O 14.533 22.165 32
J34 C19 C 14.999 20.739 33
J34 C20 C 16.467 20.429 34
J34 N4 N 16.933 19.004 35
J34 C21 C 18.401 18.694 36
J34 O22 O 19.402 19.811 37
J34 C22 C 18.867 17.269 38
J34 C23 C 20.334 16.959 39
J34 O8 O 20.800 15.533 40
J34 C24 C 22.268 15.224 41
J34 C25 C 22.734 13.798 42
J34 O9 O 24.202 13.489 43
J34 C26 C 24.668 12.063 44
J34 C27 C 26.136 11.754 45
J34 O10 O 26.602 10.328 46
J34 C28 C 28.070 10.019 47
J34 C29 C 28.535 8.593 48
J34 O11 O 30.003 8.284 49
J34 C30 C 30.469 6.858 50
J34 C31 C 31.937 6.549 51
J34 O12 O 32.403 5.123 52
J34 C32 C 33.871 4.814 53
J34 C33 C 34.337 3.388 54
J34 O13 O 35.805 3.078 55
J34 C34 C 36.270 1.653 56
J34 C35 C 37.738 1.343 57
J34 O14 O 38.204 -0.083 58
J34 C36 C 39.672 -0.392 59
J34 C37 C 40.138 -1.818 60
J34 O15 O 41.606 -2.127 61
J34 C38 C 42.072 -3.553 62
J34 C39 C 43.539 -3.862 63
J34 O16 O 44.005 -5.288 64
J34 C40 C 45.473 -5.597 65
J34 C41 C 45.939 -7.023 66
J34 O17 O 47.407 -7.332 67
J34 C42 C 47.873 -8.758 68
J34 C43 C 49.341 -9.068 69
J34 O18 O 49.807 -10.493 70
J34 C44 C 51.275 -10.803 71
J34 C45 C 51.740 -12.228 72
J34 O19 O 53.208 -12.538 73
J34 C46 C 53.674 -13.963 74
J34 C47 C 55.142 -14.273 75
J34 N5 N 55.608 -15.699 76
J34 C48 C 57.076 -16.008 77
J34 O21 O 58.078 -14.891 78
J34 C49 C 57.542 -17.434 79
J34 C50 C 59.010 -17.743 80
J34 C51 C 59.475 -19.169 81
J34 C52 C 60.943 -19.478 82
J34 C53 C 61.409 -20.904 83
J34 C56 C 62.828 -21.361 84
J34 C55 C 62.828 -22.861 85
J34 C54 C 61.409 -23.318 86
J34 S S 60.534 -22.111 87
J34 N7 N 64.255 -20.897 88
J34 C57 C 65.137 -22.111 89
J34 O20 O 66.637 -22.111 90
J34 N6 N 64.255 -23.325 91
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
J34 O23 C12 DOUBLE NONE 1
J34 C12 N2 SINGLE NONE 2
J34 C12 N3 SINGLE NONE 3
J34 N2 C11 SINGLE NONE 4
J34 C11 C10 SINGLE NONE 5
J34 C10 C9 SINGLE NONE 6
J34 C9 C8 SINGLE NONE 7
J34 C1 C8 SINGLE BEGINDASH 8
J34 C1 N SINGLE NONE 9
J34 C1 C SINGLE NONE 10
J34 N C2 SINGLE NONE 11
J34 C2 O6 DOUBLE NONE 12
J34 C2 N1 SINGLE NONE 13
J34 N1 C3 SINGLE NONE 14
J34 C3 C7 SINGLE NONE 15
J34 C3 C4 SINGLE BEGINDASH 16
J34 C7 O5 DOUBLE NONE 17
J34 C7 O4 SINGLE NONE 18
J34 C4 C5 SINGLE NONE 19
J34 C5 C6 SINGLE NONE 20
J34 C6 O3 DOUBLE NONE 21
J34 C6 O2 SINGLE NONE 22
J34 C O1 SINGLE NONE 23
J34 C O DOUBLE NONE 24
J34 N3 C13 SINGLE NONE 25
J34 C13 C18 DOUBLE NONE 26
J34 C13 C14 SINGLE NONE 27
J34 C18 C17 SINGLE NONE 28
J34 C18 O7 SINGLE NONE 29
J34 C17 C16 DOUBLE NONE 30
J34 C16 C15 SINGLE NONE 31
J34 C15 C14 DOUBLE NONE 32
J34 O7 C19 SINGLE NONE 33
J34 C19 C20 SINGLE NONE 34
J34 C20 N4 SINGLE NONE 35
J34 N4 C21 SINGLE NONE 36
J34 C21 O22 DOUBLE NONE 37
J34 C21 C22 SINGLE NONE 38
J34 C22 C23 SINGLE NONE 39
J34 C23 O8 SINGLE NONE 40
J34 O8 C24 SINGLE NONE 41
J34 C24 C25 SINGLE NONE 42
J34 C25 O9 SINGLE NONE 43
J34 O9 C26 SINGLE NONE 44
J34 C26 C27 SINGLE NONE 45
J34 C27 O10 SINGLE NONE 46
J34 O10 C28 SINGLE NONE 47
J34 C28 C29 SINGLE NONE 48
J34 C29 O11 SINGLE NONE 49
J34 O11 C30 SINGLE NONE 50
J34 C30 C31 SINGLE NONE 51
J34 C31 O12 SINGLE NONE 52
J34 O12 C32 SINGLE NONE 53
J34 C32 C33 SINGLE NONE 54
J34 C33 O13 SINGLE NONE 55
J34 O13 C34 SINGLE NONE 56
J34 C34 C35 SINGLE NONE 57
J34 C35 O14 SINGLE NONE 58
J34 O14 C36 SINGLE NONE 59
J34 C36 C37 SINGLE NONE 60
J34 C37 O15 SINGLE NONE 61
J34 O15 C38 SINGLE NONE 62
J34 C38 C39 SINGLE NONE 63
J34 C39 O16 SINGLE NONE 64
J34 O16 C40 SINGLE NONE 65
J34 C40 C41 SINGLE NONE 66
J34 C41 O17 SINGLE NONE 67
J34 O17 C42 SINGLE NONE 68
J34 C42 C43 SINGLE NONE 69
J34 C43 O18 SINGLE NONE 70
J34 O18 C44 SINGLE NONE 71
J34 C44 C45 SINGLE NONE 72
J34 C45 O19 SINGLE NONE 73
J34 O19 C46 SINGLE NONE 74
J34 C46 C47 SINGLE NONE 75
J34 C47 N5 SINGLE NONE 76
J34 N5 C48 SINGLE NONE 77
J34 C48 O21 DOUBLE NONE 78
J34 C48 C49 SINGLE NONE 79
J34 C49 C50 SINGLE NONE 80
J34 C50 C51 SINGLE NONE 81
J34 C51 C52 SINGLE NONE 82
J34 C53 C52 SINGLE BEGINWEDGE 83
J34 C53 C56 SINGLE NONE 84
J34 C53 S SINGLE NONE 85
J34 C56 C55 SINGLE NONE 86
J34 C56 N7 SINGLE NONE 87
J34 C55 C54 SINGLE NONE 88
J34 C55 N6 SINGLE NONE 89
J34 C54 S SINGLE NONE 90
J34 N7 C57 SINGLE NONE 91
J34 C57 O20 DOUBLE NONE 92
J34 C57 N6 SINGLE NONE 93
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
J34 MurckoScaffold S1 scaffold 'O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@@H]21)NCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCC(=O)NCCOc1ccccc1' InChI=1S/C45H78N4O16S/c50-42(9-5-4-8-41-44-40(38-66-41)48-45(52)49-44)46-11-14-54-17-19-56-21-23-58-25-27-60-29-31-62-33-35-64-37-36-63-34-32-61-30-28-59-26-24-57-22-20-55-18-16-53-13-10-43(51)47-12-15-65-39-6-2-1-3-7-39/h1-3,6-7,40-41,44H,4-5,8-38H2,(H,46,50)(H,47,51)(H2,48,49,52)/t40-,41-,44-/m0/s1 RYKCIWLZYMEESN-UEMJTUMQSA-N
J34 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
J34 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
J34 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
J34 C13 S1 1
J34 C18 S1 1
J34 C17 S1 1
J34 C16 S1 1
J34 C15 S1 1
J34 C14 S1 1
J34 O7 S1 1
J34 C19 S1 1
J34 C20 S1 1
J34 N4 S1 1
J34 C21 S1 1
J34 O22 S1 1
J34 C22 S1 1
J34 C23 S1 1
J34 O8 S1 1
J34 C24 S1 1
J34 C25 S1 1
J34 O9 S1 1
J34 C26 S1 1
J34 C27 S1 1
J34 O10 S1 1
J34 C28 S1 1
J34 C29 S1 1
J34 O11 S1 1
J34 C30 S1 1
J34 C31 S1 1
J34 O12 S1 1
J34 C32 S1 1
J34 C33 S1 1
J34 O13 S1 1
J34 C34 S1 1
J34 C35 S1 1
J34 O14 S1 1
J34 C36 S1 1
J34 C37 S1 1
J34 O15 S1 1
J34 C38 S1 1
J34 C39 S1 1
J34 O16 S1 1
J34 C40 S1 1
J34 C41 S1 1
J34 O17 S1 1
J34 C42 S1 1
J34 C43 S1 1
J34 O18 S1 1
J34 C44 S1 1
J34 C45 S1 1
J34 O19 S1 1
J34 C46 S1 1
J34 C47 S1 1
J34 N5 S1 1
J34 C48 S1 1
J34 O21 S1 1
J34 C49 S1 1
J34 C50 S1 1
J34 C51 S1 1
J34 C52 S1 1
J34 C53 S1 1
J34 C56 S1 1
J34 C55 S1 1
J34 C54 S1 1
J34 S S1 1
J34 N7 S1 1
J34 C57 S1 1
J34 O20 S1 1
J34 N6 S1 1
J34 N4 F1 1
J34 C21 F1 1
J34 O22 F1 1
J34 C22 F1 1
J34 N5 F1 2
J34 C48 F1 2
J34 O21 F1 2
J34 C49 F1 2
J34 O5 F2 1
J34 C7 F2 1
J34 C3 F2 1
J34 N1 F2 1
J34 O F2 2
J34 C F2 2
J34 C1 F2 2
J34 N F2 2
J34 C13 F3 1
J34 C18 F3 1
J34 C17 F3 1
J34 C16 F3 1
J34 C15 F3 1
J34 C14 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id J34
_pdbe_chem_comp_rdkit_properties.exactmw 1322.641
_pdbe_chem_comp_rdkit_properties.amw 1323.521
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 32
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 11
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 61
_pdbe_chem_comp_rdkit_properties.NumHBD 11
_pdbe_chem_comp_rdkit_properties.NumHBA 25
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 91
_pdbe_chem_comp_rdkit_properties.NumAtoms 189
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 33
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 8
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.759
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 673.481
_pdbe_chem_comp_rdkit_properties.tpsa 413.480
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.132
_pdbe_chem_comp_rdkit_properties.CrippenMR 327.182
_pdbe_chem_comp_rdkit_properties.chi0v 43.600
_pdbe_chem_comp_rdkit_properties.chi1v 21.855
_pdbe_chem_comp_rdkit_properties.chi2v 7.085
_pdbe_chem_comp_rdkit_properties.chi3v 7.085
_pdbe_chem_comp_rdkit_properties.chi4v 4.110
_pdbe_chem_comp_rdkit_properties.chi0n 140.784
_pdbe_chem_comp_rdkit_properties.chi1n 69.341
_pdbe_chem_comp_rdkit_properties.chi2n 6.290
_pdbe_chem_comp_rdkit_properties.chi3n 6.290
_pdbe_chem_comp_rdkit_properties.chi4n 3.428
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -5.950
_pdbe_chem_comp_rdkit_properties.kappa1 17.546
_pdbe_chem_comp_rdkit_properties.kappa2 53.547
_pdbe_chem_comp_rdkit_properties.kappa3 42.749
_pdbe_chem_comp_rdkit_properties.Phi 10.324
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
J34 UniChem ChEMBL CHEMBL3309669
J34 UniChem PDBe J34
J34 UniChem PubChem 118706013
J34 UniChem BindingDb 50046844
#