data_J9P
#
_chem_comp.id J9P
_chem_comp.name "(11alpha,12alpha,13E,16S)-11,16-dihydroxy-16-methyl-9-oxoprost-13-en-1-oic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H36 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-08-27
_chem_comp.pdbx_modified_date 2018-11-30
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 368.508
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code J9P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6M9T
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J9P C01 C1 C 0 1 N N N N N N 125.471 -11.713 153.693 9.330 -2.833 0.001 C01 J9P 1
J9P C02 C2 C 0 1 N N N N N N 125.985 -11.098 152.400 8.008 -2.753 -0.765 C02 J9P 2
J9P C03 C3 C 0 1 N N N N N N 126.083 -9.576 152.453 6.994 -1.949 0.050 C03 J9P 3
J9P C04 C4 C 0 1 N N N N N N 126.987 -9.075 151.320 5.672 -1.869 -0.716 C04 J9P 4
J9P C05 C5 C 0 1 N N S N N N 126.850 -7.623 150.827 4.658 -1.064 0.099 C05 J9P 5
J9P C06 C6 C 0 1 N N N N N N 125.442 -7.371 150.307 5.197 0.348 0.334 C06 J9P 6
J9P C07 C7 C 0 1 N N N N N N 127.134 -6.541 151.880 3.336 -0.984 -0.667 C07 J9P 7
J9P C08 C8 C 0 1 N N N N N N 128.465 -6.717 152.613 2.377 -0.090 0.077 C08 J9P 8
J9P C09 C9 C 0 1 N N N N N N 129.204 -5.656 152.853 1.829 0.932 -0.532 C09 J9P 9
J9P C10 C10 C 0 1 N N R N N N 130.501 -5.766 153.576 0.870 1.826 0.212 C10 J9P 10
J9P C11 C11 C 0 1 N N R N N N 131.659 -4.895 152.739 1.325 3.305 0.124 C11 J9P 11
J9P C12 C12 C 0 1 N N N N N N 132.607 -4.536 153.685 -0.003 4.073 0.341 C12 J9P 12
J9P C13 C13 C 0 1 N N N N N N 131.851 -4.551 155.066 -1.044 3.242 -0.388 C13 J9P 13
J9P C15 C14 C 0 1 N N R N N N 130.422 -5.107 154.822 -0.513 1.826 -0.472 C15 J9P 14
J9P C16 C15 C 0 1 N N N N N N 129.905 -6.024 155.987 -1.457 0.869 0.258 C16 J9P 15
J9P C17 C16 C 0 1 N N N N N N 130.792 -7.234 156.286 -2.783 0.783 -0.501 C17 J9P 16
J9P C18 C17 C 0 1 N N N N N N 130.145 -8.236 157.242 -3.727 -0.174 0.229 C18 J9P 17
J9P C19 C18 C 0 1 N N N N N N 130.348 -7.882 158.715 -5.053 -0.260 -0.529 C19 J9P 18
J9P C20 C19 C 0 1 N N N N N N 131.730 -8.225 159.263 -5.997 -1.217 0.201 C20 J9P 19
J9P C21 C20 C 0 1 N N N N N N 132.063 -7.351 160.469 -7.323 -1.303 -0.558 C21 J9P 20
J9P C22 C21 C 0 1 N N N N N N 133.553 -7.294 160.814 -8.253 -2.245 0.161 C22 J9P 21
J9P O14 O1 O 0 1 N N N N N N 132.307 -4.199 156.109 -2.100 3.637 -0.820 O14 J9P 22
J9P O23 O2 O 0 1 N N N N N N 133.919 -7.460 162.009 -9.482 -2.477 -0.327 O23 J9P 23
J9P O24 O3 O 0 1 N N N N N N 134.416 -7.066 159.922 -7.893 -2.792 1.176 O24 J9P 24
J9P O25 O4 O 0 1 N N N N N N 132.233 -5.696 151.788 2.263 3.611 1.158 O25 J9P 25
J9P O26 O5 O 0 1 N N N N N N 127.735 -7.454 149.753 4.441 -1.706 1.357 O26 J9P 26
J9P H1 H1 H 0 1 N N N N N N 125.425 -12.807 153.587 10.052 -3.407 -0.580 H1 J9P 27
J9P H2 H2 H 0 1 N N N N N N 126.151 -11.453 154.518 9.714 -1.827 0.168 H2 J9P 28
J9P H3 H3 H 0 1 N N N N N N 124.465 -11.323 153.910 9.164 -3.323 0.961 H3 J9P 29
J9P H4 H4 H 0 1 N N N N N N 125.300 -11.376 151.585 8.173 -2.263 -1.725 H4 J9P 30
J9P H5 H5 H 0 1 N N N N N N 126.986 -11.505 152.193 7.623 -3.759 -0.932 H5 J9P 31
J9P H6 H6 H 0 1 N N N N N N 126.507 -9.271 153.421 6.828 -2.438 1.010 H6 J9P 32
J9P H7 H7 H 0 1 N N N N N N 125.079 -9.141 152.339 7.378 -0.942 0.217 H7 J9P 33
J9P H8 H8 H 0 1 N N N N N N 126.804 -9.726 150.453 5.837 -1.379 -1.676 H8 J9P 34
J9P H9 H9 H 0 1 N N N N N N 128.026 -9.201 151.660 5.287 -2.875 -0.883 H9 J9P 35
J9P H10 H10 H 0 1 N N N N N N 124.720 -7.496 151.127 5.363 0.838 -0.626 H10 J9P 36
J9P H11 H11 H 0 1 N N N N N N 125.375 -6.346 149.912 4.475 0.922 0.914 H11 J9P 37
J9P H12 H12 H 0 1 N N N N N N 125.214 -8.089 149.505 6.139 0.292 0.879 H12 J9P 38
J9P H13 H13 H 0 1 N N N N N N 127.144 -5.563 151.377 3.516 -0.575 -1.661 H13 J9P 39
J9P H14 H14 H 0 1 N N N N N N 126.324 -6.562 152.624 2.907 -1.982 -0.757 H14 J9P 40
J9P H15 H15 H 0 1 N N N N N N 128.793 -7.697 152.928 2.142 -0.292 1.111 H15 J9P 41
J9P H16 H16 H 0 1 N N N N N N 128.864 -4.687 152.519 2.064 1.135 -1.566 H16 J9P 42
J9P H17 H17 H 0 1 N N N N N N 130.829 -6.812 153.665 0.783 1.511 1.252 H17 J9P 43
J9P H18 H18 H 0 1 N N N N N N 131.168 -4.015 152.298 1.743 3.524 -0.858 H18 J9P 44
J9P H19 H19 H 0 1 N N N N N N 133.436 -5.260 153.693 -0.239 4.133 1.404 H19 J9P 45
J9P H20 H20 H 0 1 N N N N N N 133.000 -3.531 153.473 0.060 5.071 -0.092 H20 J9P 46
J9P H21 H21 H 0 1 N N N N N N 129.737 -4.250 154.744 -0.412 1.527 -1.515 H21 J9P 47
J9P H22 H22 H 0 1 N N N N N N 129.838 -5.414 156.900 -1.003 -0.120 0.310 H22 J9P 48
J9P H23 H23 H 0 1 N N N N N N 128.904 -6.391 155.716 -1.639 1.238 1.268 H23 J9P 49
J9P H24 H24 H 0 1 N N N N N N 131.013 -7.748 155.339 -3.237 1.773 -0.552 H24 J9P 50
J9P H25 H25 H 0 1 N N N N N N 131.730 -6.877 156.737 -2.600 0.414 -1.510 H25 J9P 51
J9P H26 H26 H 0 1 N N N N N N 129.065 -8.268 157.036 -3.273 -1.163 0.281 H26 J9P 52
J9P H27 H27 H 0 1 N N N N N N 130.583 -9.228 157.057 -3.910 0.195 1.239 H27 J9P 53
J9P H28 H28 H 0 1 N N N N N N 130.190 -6.800 158.833 -5.507 0.730 -0.581 H28 J9P 54
J9P H29 H29 H 0 1 N N N N N N 129.599 -8.429 159.306 -4.871 -0.629 -1.539 H29 J9P 55
J9P H30 H30 H 0 1 N N N N N N 131.746 -9.282 159.567 -5.543 -2.206 0.252 H30 J9P 56
J9P H31 H31 H 0 1 N N N N N N 132.482 -8.058 158.477 -6.180 -0.848 1.210 H31 J9P 57
J9P H32 H32 H 0 1 N N N N N N 131.719 -6.328 160.258 -7.777 -0.313 -0.610 H32 J9P 58
J9P H33 H33 H 0 1 N N N N N N 131.522 -7.747 161.341 -7.141 -1.672 -1.568 H33 J9P 59
J9P H34 H34 H 0 1 N N N N N N 134.864 -7.383 162.065 -10.043 -3.089 0.169 H34 J9P 60
J9P H35 H35 H 0 1 N N N N N N 132.891 -5.202 151.312 2.578 4.525 1.145 H35 J9P 61
J9P H36 H36 H 0 1 N N N N N N 128.625 -7.606 150.049 4.098 -2.607 1.285 H36 J9P 62
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J9P O26 C05 SING N N 1
J9P C06 C05 SING N N 2
J9P C05 C04 SING N N 3
J9P C05 C07 SING N N 4
J9P C04 C03 SING N N 5
J9P O25 C11 SING N N 6
J9P C07 C08 SING N N 7
J9P C02 C03 SING N N 8
J9P C02 C01 SING N N 9
J9P C08 C09 DOUB N E 10
J9P C11 C10 SING N N 11
J9P C11 C12 SING N N 12
J9P C09 C10 SING N N 13
J9P C10 C15 SING N N 14
J9P C12 C13 SING N N 15
J9P C15 C13 SING N N 16
J9P C15 C16 SING N N 17
J9P C13 O14 DOUB N N 18
J9P C16 C17 SING N N 19
J9P C17 C18 SING N N 20
J9P C18 C19 SING N N 21
J9P C19 C20 SING N N 22
J9P C20 C21 SING N N 23
J9P O24 C22 DOUB N N 24
J9P C21 C22 SING N N 25
J9P C22 O23 SING N N 26
J9P C01 H1 SING N N 27
J9P C01 H2 SING N N 28
J9P C01 H3 SING N N 29
J9P C02 H4 SING N N 30
J9P C02 H5 SING N N 31
J9P C03 H6 SING N N 32
J9P C03 H7 SING N N 33
J9P C04 H8 SING N N 34
J9P C04 H9 SING N N 35
J9P C06 H10 SING N N 36
J9P C06 H11 SING N N 37
J9P C06 H12 SING N N 38
J9P C07 H13 SING N N 39
J9P C07 H14 SING N N 40
J9P C08 H15 SING N N 41
J9P C09 H16 SING N N 42
J9P C10 H17 SING N N 43
J9P C11 H18 SING N N 44
J9P C12 H19 SING N N 45
J9P C12 H20 SING N N 46
J9P C15 H21 SING N N 47
J9P C16 H22 SING N N 48
J9P C16 H23 SING N N 49
J9P C17 H24 SING N N 50
J9P C17 H25 SING N N 51
J9P C18 H26 SING N N 52
J9P C18 H27 SING N N 53
J9P C19 H28 SING N N 54
J9P C19 H29 SING N N 55
J9P C20 H30 SING N N 56
J9P C20 H31 SING N N 57
J9P C21 H32 SING N N 58
J9P C21 H33 SING N N 59
J9P O23 H34 SING N N 60
J9P O25 H35 SING N N 61
J9P O26 H36 SING N N 62
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J9P SMILES ACDLabs 12.01 CCCCC(C\C=C\C1C(C(CC1O)=O)CCCCCCC(O)=O)(C)O
J9P InChI InChI 1.03 InChI=1S/C21H36O5/c1-3-4-13-21(2,26)14-9-11-17-16(18(22)15-19(17)23)10-7-5-6-8-12-20(24)25/h9,11,16-17,19,23,26H,3-8,10,12-15H2,1-2H3,(H,24,25)/b11-9+/t16-,17-,19-,21+/m1/s1
J9P InChIKey InChI 1.03 CNWGPXZGIIOYDL-AGRNYGATSA-N
J9P SMILES_CANONICAL CACTVS 3.385 CCCC[C@](C)(O)C\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(O)=O
J9P SMILES CACTVS 3.385 CCCC[C](C)(O)CC=C[CH]1[CH](O)CC(=O)[CH]1CCCCCCC(O)=O
J9P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCCC[C@@](C)(C/C=C/[C@H]1[C@@H](CC(=O)[C@@H]1CCCCCCC(=O)O)O)O
J9P SMILES "OpenEye OEToolkits" 2.0.6 CCCCC(C)(CC=CC1C(CC(=O)C1CCCCCCC(=O)O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
J9P "SYSTEMATIC NAME" ACDLabs 12.01 "(11alpha,12alpha,13E,16S)-11,16-dihydroxy-16-methyl-9-oxoprost-13-en-1-oic acid"
J9P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "7-[(1~{R},2~{R},3~{R})-2-[(~{E},4~{S})-4-methyl-4-oxidanyl-oct-1-enyl]-3-oxidanyl-5-oxidanylidene-cyclopentyl]heptanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J9P 'Create component' 2018-08-27 RCSB
J9P 'Initial release' 2018-12-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
J9P C01 C 20.459 6.261 1
J9P C02 C 20.459 4.761 2
J9P C03 C 19.160 4.011 3
J9P C04 C 19.160 2.511 4
J9P C05 C 17.861 1.761 5
J9P C06 C 18.611 0.462 6
J9P C07 C 16.562 1.011 7
J9P C08 C 16.562 -0.489 8
J9P C09 C 15.263 -1.239 9
J9P C10 C 15.263 -2.739 10
J9P C11 C 16.477 -3.621 11
J9P C12 C 16.013 -5.047 12
J9P C13 C 14.513 -5.047 13
J9P C15 C 14.050 -3.621 14
J9P C16 C 12.623 -3.157 15
J9P C17 C 11.508 -4.161 16
J9P C18 C 10.082 -3.697 17
J9P C19 C 8.967 -4.701 18
J9P C20 C 7.540 -4.238 19
J9P C21 C 6.426 -5.241 20
J9P C22 C 4.999 -4.778 21
J9P O14 O 13.632 -6.261 22
J9P O23 O 4.687 -3.311 23
J9P O24 O 3.884 -5.781 24
J9P O25 O 17.903 -3.157 25
J9P O26 O 17.111 3.060 26
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
J9P O26 C05 SINGLE NONE 1
J9P C05 C06 SINGLE BEGINDASH 2
J9P C05 C04 SINGLE NONE 3
J9P C05 C07 SINGLE NONE 4
J9P C04 C03 SINGLE NONE 5
J9P C11 O25 SINGLE BEGINDASH 6
J9P C07 C08 SINGLE ENDUPRIGHT 7
J9P C02 C03 SINGLE NONE 8
J9P C02 C01 SINGLE NONE 9
J9P C08 C09 DOUBLE NONE 10
J9P C11 C10 SINGLE NONE 11
J9P C11 C12 SINGLE NONE 12
J9P C10 C09 SINGLE BEGINWEDGE 13
J9P C10 C15 SINGLE NONE 14
J9P C12 C13 SINGLE NONE 15
J9P C15 C13 SINGLE NONE 16
J9P C15 C16 SINGLE BEGINDASH 17
J9P C13 O14 DOUBLE NONE 18
J9P C16 C17 SINGLE NONE 19
J9P C17 C18 SINGLE NONE 20
J9P C18 C19 SINGLE NONE 21
J9P C19 C20 SINGLE NONE 22
J9P C20 C21 SINGLE NONE 23
J9P O24 C22 DOUBLE NONE 24
J9P C21 C22 SINGLE NONE 25
J9P C22 O23 SINGLE NONE 26
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
J9P MurckoScaffold S1 scaffold O=C1CCCC1 InChI=1S/C5H8O/c6-5-3-1-2-4-5/h1-4H2 BGTOWKSIORTVQH-UHFFFAOYSA-N
J9P cyclopentane F1 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
J9P C10 S1 1
J9P C11 S1 1
J9P C12 S1 1
J9P C13 S1 1
J9P C15 S1 1
J9P O14 S1 1
J9P C10 F1 1
J9P C11 F1 1
J9P C12 F1 1
J9P C13 F1 1
J9P C15 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id J9P
_pdbe_chem_comp_rdkit_properties.exactmw 368.256
_pdbe_chem_comp_rdkit_properties.amw 368.514
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 17
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 62
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.810
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 207.887
_pdbe_chem_comp_rdkit_properties.tpsa 94.830
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.865
_pdbe_chem_comp_rdkit_properties.CrippenMR 101.854
_pdbe_chem_comp_rdkit_properties.chi0v 12.541
_pdbe_chem_comp_rdkit_properties.chi1v 6.271
_pdbe_chem_comp_rdkit_properties.chi2v 2.198
_pdbe_chem_comp_rdkit_properties.chi3v 2.198
_pdbe_chem_comp_rdkit_properties.chi4v 1.265
_pdbe_chem_comp_rdkit_properties.chi0n 48.541
_pdbe_chem_comp_rdkit_properties.chi1n 23.995
_pdbe_chem_comp_rdkit_properties.chi2n 2.198
_pdbe_chem_comp_rdkit_properties.chi3n 2.198
_pdbe_chem_comp_rdkit_properties.chi4n 1.265
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.200
_pdbe_chem_comp_rdkit_properties.kappa1 3.800
_pdbe_chem_comp_rdkit_properties.kappa2 11.500
_pdbe_chem_comp_rdkit_properties.kappa3 8.454
_pdbe_chem_comp_rdkit_properties.Phi 1.681
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
J9P UniChem PDBe J9P
J9P UniChem ZINC ZINC000005514857
J9P UniChem 'PubChem TPHARMA' 14779451
J9P UniChem PubChem 9820635
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
J9P C01 -6.866 -2.191 2.136 ETKDGv3 1
J9P C02 -5.975 -2.366 0.910 ETKDGv3 2
J9P C03 -5.443 -1.016 0.413 ETKDGv3 3
J9P C04 -4.548 -1.205 -0.826 ETKDGv3 4
J9P C05 -3.905 0.106 -1.385 ETKDGv3 5
J9P C06 -5.004 1.074 -1.862 ETKDGv3 6
J9P C07 -3.016 0.842 -0.341 ETKDGv3 7
J9P C08 -1.995 -0.052 0.313 ETKDGv3 8
J9P C09 -0.806 -0.304 -0.254 ETKDGv3 9
J9P C10 0.185 -1.242 0.395 ETKDGv3 10
J9P C11 -0.310 -2.701 0.392 ETKDGv3 11
J9P C12 0.948 -3.569 0.391 ETKDGv3 12
J9P C13 1.990 -2.675 -0.170 ETKDGv3 13
J9P C15 1.546 -1.258 -0.334 ETKDGv3 14
J9P C16 2.530 -0.237 0.281 ETKDGv3 15
J9P C17 3.715 0.065 -0.653 ETKDGv3 16
J9P C18 4.754 0.999 -0.009 ETKDGv3 17
J9P C19 4.266 2.456 0.080 ETKDGv3 18
J9P C20 5.313 3.391 0.706 ETKDGv3 19
J9P C21 6.479 3.695 -0.245 ETKDGv3 20
J9P C22 7.400 4.703 0.367 ETKDGv3 21
J9P O14 3.091 -3.082 -0.505 ETKDGv3 22
J9P O23 8.423 4.284 1.211 ETKDGv3 23
J9P O24 7.225 5.932 0.150 ETKDGv3 24
J9P O25 -1.099 -2.960 1.523 ETKDGv3 25
J9P O26 -3.127 -0.204 -2.520 ETKDGv3 26
J9P H1 -7.235 -3.183 2.472 ETKDGv3 27
J9P H2 -7.741 -1.553 1.889 ETKDGv3 28
J9P H3 -6.294 -1.725 2.966 ETKDGv3 29
J9P H4 -6.563 -2.857 0.105 ETKDGv3 30
J9P H5 -5.123 -3.029 1.178 ETKDGv3 31
J9P H6 -4.865 -0.541 1.232 ETKDGv3 32
J9P H7 -6.307 -0.366 0.160 ETKDGv3 33
J9P H8 -5.151 -1.677 -1.633 ETKDGv3 34
J9P H9 -3.743 -1.929 -0.571 ETKDGv3 35
J9P H10 -5.594 1.474 -1.011 ETKDGv3 36
J9P H11 -5.693 0.563 -2.568 ETKDGv3 37
J9P H12 -4.548 1.938 -2.392 ETKDGv3 38
J9P H13 -2.501 1.702 -0.824 ETKDGv3 39
J9P H14 -3.653 1.276 0.460 ETKDGv3 40
J9P H15 -2.245 -0.507 1.267 ETKDGv3 41
J9P H16 -0.552 0.182 -1.193 ETKDGv3 42
J9P H17 0.340 -0.924 1.454 ETKDGv3 43
J9P H18 -0.891 -2.898 -0.542 ETKDGv3 44
J9P H19 1.237 -3.871 1.421 ETKDGv3 45
J9P H20 0.808 -4.466 -0.249 ETKDGv3 46
J9P H21 1.414 -1.062 -1.422 ETKDGv3 47
J9P H22 1.979 0.709 0.465 ETKDGv3 48
J9P H23 2.901 -0.612 1.261 ETKDGv3 49
J9P H24 3.345 0.512 -1.601 ETKDGv3 50
J9P H25 4.231 -0.882 -0.912 ETKDGv3 51
J9P H26 5.670 0.959 -0.635 ETKDGv3 52
J9P H27 5.021 0.624 1.003 ETKDGv3 53
J9P H28 3.359 2.499 0.719 ETKDGv3 54
J9P H29 3.985 2.827 -0.930 ETKDGv3 55
J9P H30 4.807 4.347 0.965 ETKDGv3 56
J9P H31 5.699 2.948 1.650 ETKDGv3 57
J9P H32 6.091 4.089 -1.210 ETKDGv3 58
J9P H33 7.058 2.772 -0.454 ETKDGv3 59
J9P H34 9.045 4.955 1.646 ETKDGv3 60
J9P H35 -1.548 -3.831 1.359 ETKDGv3 61
J9P H36 -2.516 -0.952 -2.292 ETKDGv3 62
#