data_JC7
#
_chem_comp.id JC7
_chem_comp.name
"N-[2'-{[2-(acetylamino)-2-deoxy-beta-D-galactopyranosyl]oxy}-6'-(trifluoromethyl)[1,1'-biphenyl]-3-yl]methanesulfonamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H25 F3 N2 O8 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-08-29
_chem_comp.pdbx_modified_date 2019-08-30
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 534.503
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code JC7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6MAW
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JC7 C10 C1 C 0 1 Y N N N N N 133.675 105.020 -24.302 -0.020 -4.158 0.014 C10 JC7 1
JC7 C17 C2 C 0 1 Y N N N N N 134.442 105.306 -20.559 1.403 -0.740 0.666 C17 JC7 2
JC7 C26 C3 C 0 1 Y N N N N N 135.401 104.441 -18.504 2.272 0.973 2.111 C26 JC7 3
JC7 C28 C4 C 0 1 N N R N N N 130.173 103.844 -19.101 -3.115 1.385 0.706 C28 JC7 4
JC7 O01 O1 O 0 1 N N N N N N 128.401 107.801 -20.556 -4.724 -1.995 -2.789 O01 JC7 5
JC7 C02 C5 C 0 1 N N N N N N 127.647 106.679 -21.004 -4.988 -0.606 -2.582 C02 JC7 6
JC7 C03 C6 C 0 1 N N R N N N 128.315 105.398 -20.616 -4.634 -0.229 -1.142 C03 JC7 7
JC7 O04 O2 O 0 1 N N N N N N 129.778 105.542 -20.836 -3.227 -0.380 -0.941 O04 JC7 8
JC7 C05 C7 C 0 1 N N S N N N 130.477 104.312 -20.513 -2.791 -0.077 0.385 C05 JC7 9
JC7 O06 O3 O 0 1 N N N N N N 131.838 104.558 -20.566 -1.380 -0.284 0.482 O06 JC7 10
JC7 C07 C8 C 0 1 Y N N N N N 132.384 104.703 -21.859 -0.933 -1.558 0.328 C07 JC7 11
JC7 C08 C9 C 0 1 Y N N N N N 131.671 104.476 -23.035 -1.829 -2.586 0.089 C08 JC7 12
JC7 C09 C10 C 0 1 Y N N N N N 132.319 104.642 -24.259 -1.372 -3.881 -0.067 C09 JC7 13
JC7 C11 C11 C 0 1 Y N N N N N 134.387 105.241 -23.129 0.885 -3.143 0.252 C11 JC7 14
JC7 C12 C12 C 0 1 N N N N N N 135.857 105.666 -23.210 2.358 -3.451 0.339 C12 JC7 15
JC7 F13 F1 F 0 1 N N N N N N 136.607 104.988 -22.339 2.838 -3.080 1.600 F13 JC7 16
JC7 F14 F2 F 0 1 N N N N N N 135.946 106.968 -22.923 2.560 -4.821 0.147 F14 JC7 17
JC7 F15 F3 F 0 1 N N N N N N 136.317 105.449 -24.453 3.043 -2.735 -0.650 F15 JC7 18
JC7 C16 C13 C 0 1 Y N N N N N 133.731 105.079 -21.904 0.435 -1.835 0.411 C16 JC7 19
JC7 C18 C14 C 0 1 Y N N N N N 134.774 106.609 -20.180 2.340 -0.396 -0.305 C18 JC7 20
JC7 C19 C15 C 0 1 Y N N N N N 135.419 106.810 -18.957 3.239 0.632 -0.062 C19 JC7 21
JC7 N20 N1 N 0 1 N N N N N N 135.779 108.141 -18.562 4.180 0.982 -1.034 N20 JC7 22
JC7 S21 S1 S 0 1 N N N N N N 137.369 108.550 -18.726 4.425 2.575 -1.414 S21 JC7 23
JC7 O22 O4 O 0 1 N N N N N N 137.568 109.909 -18.332 5.383 2.542 -2.463 O22 JC7 24
JC7 C23 C16 C 0 1 N N N N N N 137.890 108.320 -20.420 2.819 3.145 -2.036 C23 JC7 25
JC7 O24 O5 O 0 1 N N N N N N 138.184 107.755 -17.855 4.724 3.190 -0.168 O24 JC7 26
JC7 C25 C17 C 0 1 Y N N N N N 135.744 105.743 -18.118 3.202 1.315 1.147 C25 JC7 27
JC7 C27 C18 C 0 1 Y N N N N N 134.759 104.229 -19.725 1.374 -0.049 1.877 C27 JC7 28
JC7 N29 N2 N 0 1 N N N N N N 130.874 102.576 -18.922 -2.723 1.682 2.086 N29 JC7 29
JC7 C30 C19 C 0 1 N N N N N N 131.915 102.403 -17.962 -1.455 2.044 2.363 C30 JC7 30
JC7 C31 C20 C 0 1 N N N N N N 132.601 101.047 -17.864 -1.051 2.350 3.782 C31 JC7 31
JC7 O32 O6 O 0 1 N N N N N N 132.260 103.315 -17.221 -0.638 2.124 1.470 O32 JC7 32
JC7 C33 C21 C 0 1 N N R N N N 128.719 103.682 -18.903 -4.621 1.614 0.541 C33 JC7 33
JC7 O34 O7 O 0 1 N N N N N N 128.484 103.273 -17.518 -4.922 2.992 0.767 O34 JC7 34
JC7 C35 C22 C 0 1 N N R N N N 127.996 104.943 -19.200 -5.032 1.226 -0.882 C35 JC7 35
JC7 O36 O8 O 0 1 N N N N N N 128.382 105.968 -18.241 -4.369 2.077 -1.820 O36 JC7 36
JC7 H1 H1 H 0 1 N N N N N N 134.167 105.139 -25.256 0.330 -5.173 -0.105 H1 JC7 37
JC7 H2 H2 H 0 1 N N N N N N 135.632 103.605 -17.860 2.247 1.507 3.049 H2 JC7 38
JC7 H3 H3 H 0 1 N N N N N N 130.560 104.586 -18.388 -2.571 2.038 0.024 H3 JC7 39
JC7 H4 H4 H 0 1 N N N N N N 127.960 108.602 -20.812 -4.925 -2.305 -3.683 H4 JC7 40
JC7 H5 H5 H 0 1 N N N N N N 127.556 106.720 -22.099 -4.384 -0.015 -3.271 H5 JC7 41
JC7 H6 H6 H 0 1 N N N N N N 126.645 106.714 -20.551 -6.044 -0.406 -2.761 H6 JC7 42
JC7 H7 H7 H 0 1 N N N N N N 127.951 104.616 -21.298 -5.171 -0.881 -0.453 H7 JC7 43
JC7 H8 H8 H 0 1 N N N N N N 130.192 103.521 -21.222 -3.304 -0.727 1.094 H8 JC7 44
JC7 H9 H9 H 0 1 N N N N N N 130.634 104.177 -22.999 -2.887 -2.375 0.024 H9 JC7 45
JC7 H10 H10 H 0 1 N N N N N N 131.778 104.480 -25.179 -2.075 -4.680 -0.253 H10 JC7 46
JC7 H11 H11 H 0 1 N N N N N N 134.536 107.445 -20.821 2.366 -0.928 -1.245 H11 JC7 47
JC7 H12 H12 H 0 1 N N N N N N 135.242 108.778 -19.115 4.689 0.291 -1.486 H12 JC7 48
JC7 H13 H13 H 0 1 N N N N N N 138.950 108.595 -20.519 2.084 3.107 -1.233 H13 JC7 49
JC7 H14 H14 H 0 1 N N N N N N 137.757 107.266 -20.704 2.912 4.169 -2.396 H14 JC7 50
JC7 H15 H15 H 0 1 N N N N N N 137.283 108.957 -21.080 2.497 2.500 -2.854 H15 JC7 51
JC7 H16 H16 H 0 1 N N N N N N 136.254 105.919 -17.182 3.902 2.116 1.335 H16 JC7 52
JC7 H17 H17 H 0 1 N N N N N N 134.505 103.224 -20.029 0.649 -0.314 2.632 H17 JC7 53
JC7 H18 H18 H 0 1 N N N N N N 130.614 101.798 -19.495 -3.376 1.618 2.800 H18 JC7 54
JC7 H19 H19 H 0 1 N N N N N N 133.371 101.081 -17.079 -1.912 2.225 4.440 H19 JC7 55
JC7 H20 H20 H 0 1 N N N N N N 131.856 100.277 -17.614 -0.257 1.668 4.089 H20 JC7 56
JC7 H21 H21 H 0 1 N N N N N N 133.071 100.804 -18.828 -0.692 3.377 3.845 H21 JC7 57
JC7 H22 H22 H 0 1 N N N N N N 128.352 102.895 -19.578 -5.164 0.999 1.259 H22 JC7 58
JC7 H23 H23 H 0 1 N N N N N N 128.952 102.465 -17.342 -5.860 3.209 0.679 H23 JC7 59
JC7 H24 H24 H 0 1 N N N N N N 126.914 104.762 -19.126 -6.111 1.333 -0.992 H24 JC7 60
JC7 H25 H25 H 0 1 N N N N N N 128.178 105.672 -17.362 -4.580 1.884 -2.743 H25 JC7 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JC7 F15 C12 SING N N 1
JC7 C10 C09 DOUB Y N 2
JC7 C10 C11 SING Y N 3
JC7 C09 C08 SING Y N 4
JC7 C12 C11 SING N N 5
JC7 C12 F14 SING N N 6
JC7 C12 F13 SING N N 7
JC7 C11 C16 DOUB Y N 8
JC7 C08 C07 DOUB Y N 9
JC7 C16 C07 SING Y N 10
JC7 C16 C17 SING N N 11
JC7 C07 O06 SING N N 12
JC7 C02 C03 SING N N 13
JC7 C02 O01 SING N N 14
JC7 O04 C03 SING N N 15
JC7 O04 C05 SING N N 16
JC7 C03 C35 SING N N 17
JC7 O06 C05 SING N N 18
JC7 C17 C18 DOUB Y N 19
JC7 C17 C27 SING Y N 20
JC7 C05 C28 SING N N 21
JC7 C23 S21 SING N N 22
JC7 C18 C19 SING Y N 23
JC7 C27 C26 DOUB Y N 24
JC7 C35 C33 SING N N 25
JC7 C35 O36 SING N N 26
JC7 C28 N29 SING N N 27
JC7 C28 C33 SING N N 28
JC7 C19 N20 SING N N 29
JC7 C19 C25 DOUB Y N 30
JC7 N29 C30 SING N N 31
JC7 C33 O34 SING N N 32
JC7 S21 N20 SING N N 33
JC7 S21 O22 DOUB N N 34
JC7 S21 O24 DOUB N N 35
JC7 C26 C25 SING Y N 36
JC7 C30 C31 SING N N 37
JC7 C30 O32 DOUB N N 38
JC7 C10 H1 SING N N 39
JC7 C26 H2 SING N N 40
JC7 C28 H3 SING N N 41
JC7 O01 H4 SING N N 42
JC7 C02 H5 SING N N 43
JC7 C02 H6 SING N N 44
JC7 C03 H7 SING N N 45
JC7 C05 H8 SING N N 46
JC7 C08 H9 SING N N 47
JC7 C09 H10 SING N N 48
JC7 C18 H11 SING N N 49
JC7 N20 H12 SING N N 50
JC7 C23 H13 SING N N 51
JC7 C23 H14 SING N N 52
JC7 C23 H15 SING N N 53
JC7 C25 H16 SING N N 54
JC7 C27 H17 SING N N 55
JC7 N29 H18 SING N N 56
JC7 C31 H19 SING N N 57
JC7 C31 H20 SING N N 58
JC7 C31 H21 SING N N 59
JC7 C33 H22 SING N N 60
JC7 O34 H23 SING N N 61
JC7 C35 H24 SING N N 62
JC7 O36 H25 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JC7 SMILES ACDLabs 12.01 c3ccc(OC1C(NC(C)=O)C(O)C(C(CO)O1)O)c(c2cc(NS(=O)(=O)C)ccc2)c3C(F)(F)F
JC7 InChI InChI 1.03 InChI=1S/C22H25F3N2O8S/c1-11(29)26-18-20(31)19(30)16(10-28)35-21(18)34-15-8-4-7-14(22(23,24)25)17(15)12-5-3-6-13(9-12)27-36(2,32)33/h3-9,16,18-21,27-28,30-31H,10H2,1-2H3,(H,26,29)/t16-,18-,19+,20-,21-/m1/s1
JC7 InChIKey InChI 1.03 RPOJFLNPFLSKOB-QNDFHXLGSA-N
JC7 SMILES_CANONICAL CACTVS 3.385 CC(=O)N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1Oc2cccc(c2c3cccc(N[S](C)(=O)=O)c3)C(F)(F)F
JC7 SMILES CACTVS 3.385 CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1Oc2cccc(c2c3cccc(N[S](C)(=O)=O)c3)C(F)(F)F
JC7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1Oc2cccc(c2c3cccc(c3)NS(=O)(=O)C)C(F)(F)F)CO)O)O
JC7 SMILES "OpenEye OEToolkits" 2.0.6 CC(=O)NC1C(C(C(OC1Oc2cccc(c2c3cccc(c3)NS(=O)(=O)C)C(F)(F)F)CO)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JC7 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[2'-{[2-(acetylamino)-2-deoxy-beta-D-galactopyranosyl]oxy}-6'-(trifluoromethyl)[1,1'-biphenyl]-3-yl]methanesulfonamide"
JC7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-2-[2-[3-(methylsulfonylamino)phenyl]-3-(trifluoromethyl)phenoxy]-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JC7 'Create component' 2018-08-29 RCSB
JC7 'Initial release' 2019-09-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
JC7 C10 C 10.301 4.226 1
JC7 C17 C 12.899 1.226 2
JC7 C26 C 15.497 1.226 3
JC7 C28 C 9.002 -2.525 4
JC7 O01 O 3.805 -1.024 5
JC7 C02 C 5.104 -0.275 6
JC7 C03 C 6.404 -1.024 7
JC7 O04 O 7.702 -0.275 8
JC7 C05 C 9.002 -1.024 9
JC7 O06 O 10.301 -0.275 10
JC7 C07 C 10.301 1.226 11
JC7 C08 C 9.002 1.976 12
JC7 C09 C 9.002 3.475 13
JC7 C11 C 11.600 3.475 14
JC7 C12 C 12.899 4.226 15
JC7 F13 F 13.649 2.926 16
JC7 F14 F 12.149 5.524 17
JC7 F15 F 14.198 4.976 18
JC7 C16 C 11.600 1.976 19
JC7 C18 C 12.899 -0.275 20
JC7 C19 C 14.198 -1.024 21
JC7 N20 N 14.198 -2.525 22
JC7 S21 S 15.497 -3.275 23
JC7 O22 O 16.247 -1.976 24
JC7 C23 C 14.747 -4.574 25
JC7 O24 O 16.796 -4.024 26
JC7 C25 C 15.497 -0.275 27
JC7 C27 C 14.198 1.976 28
JC7 N29 N 10.301 -3.275 29
JC7 C30 C 10.301 -4.774 30
JC7 C31 C 9.002 -5.524 31
JC7 O32 O 11.600 -5.524 32
JC7 C33 C 7.702 -3.275 33
JC7 O34 O 7.702 -4.774 34
JC7 C35 C 6.404 -2.525 35
JC7 O36 O 5.104 -3.275 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
JC7 F15 C12 SINGLE NONE 1
JC7 C10 C09 DOUBLE NONE 2
JC7 C10 C11 SINGLE NONE 3
JC7 C09 C08 SINGLE NONE 4
JC7 C12 C11 SINGLE NONE 5
JC7 C12 F14 SINGLE NONE 6
JC7 C12 F13 SINGLE NONE 7
JC7 C11 C16 DOUBLE NONE 8
JC7 C08 C07 DOUBLE NONE 9
JC7 C16 C07 SINGLE NONE 10
JC7 C16 C17 SINGLE NONE 11
JC7 C07 O06 SINGLE NONE 12
JC7 C03 C02 SINGLE BEGINWEDGE 13
JC7 C02 O01 SINGLE NONE 14
JC7 O04 C03 SINGLE NONE 15
JC7 O04 C05 SINGLE NONE 16
JC7 C03 C35 SINGLE NONE 17
JC7 C05 O06 SINGLE BEGINWEDGE 18
JC7 C17 C18 DOUBLE NONE 19
JC7 C17 C27 SINGLE NONE 20
JC7 C05 C28 SINGLE NONE 21
JC7 C23 S21 SINGLE NONE 22
JC7 C18 C19 SINGLE NONE 23
JC7 C27 C26 DOUBLE NONE 24
JC7 C35 C33 SINGLE NONE 25
JC7 C35 O36 SINGLE BEGINWEDGE 26
JC7 C28 N29 SINGLE BEGINDASH 27
JC7 C28 C33 SINGLE NONE 28
JC7 C19 N20 SINGLE NONE 29
JC7 C19 C25 DOUBLE NONE 30
JC7 N29 C30 SINGLE NONE 31
JC7 C33 O34 SINGLE BEGINWEDGE 32
JC7 S21 N20 SINGLE NONE 33
JC7 S21 O22 DOUBLE NONE 34
JC7 S21 O24 DOUBLE NONE 35
JC7 C26 C25 SINGLE NONE 36
JC7 C30 C31 SINGLE NONE 37
JC7 C30 O32 DOUBLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
JC7 MurckoScaffold S1 scaffold 'c1ccc(-c2ccccc2O[C@H]2CCCCO2)cc1' InChI=1S/C17H18O2/c1-2-8-14(9-3-1)15-10-4-5-11-16(15)19-17-12-6-7-13-18-17/h1-5,8-11,17H,6-7,12-13H2/t17-/m0/s1 DXBTVQYHAYKIAS-KRWDZBQOSA-N
JC7 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
JC7 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
JC7 pyranose F3 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
JC7 C10 S1 1
JC7 C17 S1 1
JC7 C26 S1 1
JC7 C28 S1 1
JC7 C03 S1 1
JC7 O04 S1 1
JC7 C05 S1 1
JC7 O06 S1 1
JC7 C07 S1 1
JC7 C08 S1 1
JC7 C09 S1 1
JC7 C11 S1 1
JC7 C16 S1 1
JC7 C18 S1 1
JC7 C19 S1 1
JC7 C25 S1 1
JC7 C27 S1 1
JC7 C33 S1 1
JC7 C35 S1 1
JC7 N29 F1 1
JC7 C30 F1 1
JC7 O32 F1 1
JC7 C31 F1 1
JC7 C10 F2 1
JC7 C09 F2 1
JC7 C08 F2 1
JC7 C07 F2 1
JC7 C16 F2 1
JC7 C11 F2 1
JC7 C17 F2 2
JC7 C18 F2 2
JC7 C19 F2 2
JC7 C25 F2 2
JC7 C26 F2 2
JC7 C27 F2 2
JC7 C35 F3 1
JC7 C03 F3 1
JC7 O04 F3 1
JC7 C05 F3 1
JC7 C28 F3 1
JC7 C33 F3 1
JC7 O06 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id JC7
_pdbe_chem_comp_rdkit_properties.exactmw 534.128
_pdbe_chem_comp_rdkit_properties.amw 534.509
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 61
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.409
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 239.761
_pdbe_chem_comp_rdkit_properties.tpsa 154.420
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.211
_pdbe_chem_comp_rdkit_properties.CrippenMR 118.318
_pdbe_chem_comp_rdkit_properties.chi0v 17.519
_pdbe_chem_comp_rdkit_properties.chi1v 10.031
_pdbe_chem_comp_rdkit_properties.chi2v 4.137
_pdbe_chem_comp_rdkit_properties.chi3v 4.137
_pdbe_chem_comp_rdkit_properties.chi4v 2.791
_pdbe_chem_comp_rdkit_properties.chi0n 41.703
_pdbe_chem_comp_rdkit_properties.chi1n 20.710
_pdbe_chem_comp_rdkit_properties.chi2n 3.714
_pdbe_chem_comp_rdkit_properties.chi3n 3.714
_pdbe_chem_comp_rdkit_properties.chi4n 2.459
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.910
_pdbe_chem_comp_rdkit_properties.kappa1 9.437
_pdbe_chem_comp_rdkit_properties.kappa2 10.602
_pdbe_chem_comp_rdkit_properties.kappa3 6.445
_pdbe_chem_comp_rdkit_properties.Phi 2.779
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
JC7 UniChem ChEMBL CHEMBL4546725
JC7 UniChem PDBe JC7
JC7 UniChem PubChem 139030266
JC7 UniChem BindingDb 50507940
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
JC7 C10 0.847 -4.023 2.208 ETKDGv3 1
JC7 C17 2.270 -1.517 -0.329 ETKDGv3 2
JC7 C26 3.376 -1.520 -2.506 ETKDGv3 3
JC7 C28 -1.537 1.462 -0.560 ETKDGv3 4
JC7 O01 -6.079 -0.557 -1.390 ETKDGv3 5
JC7 C02 -4.880 -1.182 -1.016 ETKDGv3 6
JC7 C03 -3.766 -0.145 -0.794 ETKDGv3 7
JC7 O04 -2.564 -0.813 -0.473 ETKDGv3 8
JC7 C05 -1.644 0.075 0.153 ETKDGv3 9
JC7 O06 -0.353 -0.532 0.142 ETKDGv3 10
JC7 C07 0.015 -1.702 0.829 ETKDGv3 11
JC7 C08 -0.835 -2.355 1.643 ETKDGv3 12
JC7 C09 -0.401 -3.570 2.351 ETKDGv3 13
JC7 C11 1.819 -3.314 1.334 ETKDGv3 14
JC7 C12 3.228 -3.866 1.215 ETKDGv3 15
JC7 F13 3.520 -4.706 2.275 ETKDGv3 16
JC7 F14 4.160 -2.843 1.223 ETKDGv3 17
JC7 F15 3.347 -4.586 0.042 ETKDGv3 18
JC7 C16 1.399 -2.221 0.640 ETKDGv3 19
JC7 C18 2.699 -0.269 -0.075 ETKDGv3 20
JC7 C19 3.546 0.456 -1.063 ETKDGv3 21
JC7 N20 4.029 1.790 -0.819 ETKDGv3 22
JC7 S21 3.608 2.743 0.569 ETKDGv3 23
JC7 O22 2.120 2.727 0.772 ETKDGv3 24
JC7 C23 4.443 2.126 2.015 ETKDGv3 25
JC7 O24 4.044 4.161 0.332 ETKDGv3 26
JC7 C25 3.867 -0.158 -2.216 ETKDGv3 27
JC7 C27 2.615 -2.163 -1.616 ETKDGv3 28
JC7 N29 -2.242 2.498 0.209 ETKDGv3 29
JC7 C30 -1.748 2.991 1.462 ETKDGv3 30
JC7 C31 -2.491 4.067 2.184 ETKDGv3 31
JC7 O32 -0.678 2.537 1.951 ETKDGv3 32
JC7 C33 -2.087 1.382 -2.000 ETKDGv3 33
JC7 O34 -1.204 0.597 -2.764 ETKDGv3 34
JC7 C35 -3.525 0.785 -2.018 ETKDGv3 35
JC7 O36 -3.792 0.146 -3.245 ETKDGv3 36
JC7 H1 1.137 -4.922 2.736 ETKDGv3 37
JC7 H2 3.627 -1.992 -3.447 ETKDGv3 38
JC7 H3 -0.467 1.766 -0.628 ETKDGv3 39
JC7 H4 -6.446 -0.133 -0.571 ETKDGv3 40
JC7 H5 -4.587 -1.904 -1.807 ETKDGv3 41
JC7 H6 -5.032 -1.770 -0.082 ETKDGv3 42
JC7 H7 -4.102 0.478 0.070 ETKDGv3 43
JC7 H8 -1.948 0.226 1.213 ETKDGv3 44
JC7 H9 -1.848 -2.013 1.799 ETKDGv3 45
JC7 H10 -1.098 -4.095 2.990 ETKDGv3 46
JC7 H11 2.423 0.199 0.858 ETKDGv3 47
JC7 H12 4.657 2.241 -1.522 ETKDGv3 48
JC7 H13 4.165 2.742 2.894 ETKDGv3 49
JC7 H14 4.157 1.071 2.203 ETKDGv3 50
JC7 H15 5.540 2.182 1.860 ETKDGv3 51
JC7 H16 4.481 0.342 -2.954 ETKDGv3 52
JC7 H17 2.240 -3.152 -1.846 ETKDGv3 53
JC7 H18 -3.102 2.944 -0.185 ETKDGv3 54
JC7 H19 -2.059 4.229 3.195 ETKDGv3 55
JC7 H20 -2.427 5.012 1.607 ETKDGv3 56
JC7 H21 -3.557 3.776 2.292 ETKDGv3 57
JC7 H22 -2.118 2.416 -2.420 ETKDGv3 58
JC7 H23 -1.279 0.905 -3.705 ETKDGv3 59
JC7 H24 -4.245 1.629 -1.932 ETKDGv3 60
JC7 H25 -3.242 -0.679 -3.284 ETKDGv3 61
#