data_JCF
#
_chem_comp.id JCF
_chem_comp.name 8-hydroxy-2-methylquinoline-6-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H10 N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-12-04
_chem_comp.pdbx_modified_date 2015-10-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 202.209
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code JCF
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4UCR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JCF O1 O1 O 0 1 N N N N N N 17.344 94.607 14.973 3.651 -1.563 -0.006 O1 JCF 1
JCF C10 C10 C 0 1 N N N N N N 18.511 94.975 15.155 3.258 -0.413 0.001 C10 JCF 2
JCF N1 N1 N 0 1 N N N N N N 19.111 94.860 16.328 4.144 0.603 0.001 N1 JCF 3
JCF C6 C6 C 0 1 Y N N N N N 19.278 95.612 14.019 1.808 -0.128 0.002 C6 JCF 4
JCF C5 C5 C 0 1 Y N N N N N 20.646 95.747 14.057 0.901 -1.176 -0.004 C5 JCF 5
JCF C7 C7 C 0 1 Y N N N N N 18.552 96.103 12.931 1.358 1.203 0.016 C7 JCF 6
JCF C8 C8 C 0 1 Y N N N N N 19.193 96.745 11.898 0.026 1.491 0.018 C8 JCF 7
JCF O O O 0 1 N N N N N N 18.484 97.160 10.822 -0.389 2.784 0.030 O JCF 8
JCF C9 C9 C 0 1 Y N N N N N 20.606 96.910 11.922 -0.922 0.445 0.006 C9 JCF 9
JCF C4 C4 C 0 1 Y N N N N N 21.336 96.413 13.026 -0.474 -0.900 -0.002 C4 JCF 10
JCF C3 C3 C 0 1 Y N N N N N 22.739 96.561 12.988 -1.427 -1.938 -0.008 C3 JCF 11
JCF C2 C2 C 0 1 Y N N N N N 23.332 97.172 11.924 -2.750 -1.598 -0.006 C2 JCF 12
JCF N N N 0 1 Y N N N N N 21.220 97.513 10.844 -2.232 0.708 0.008 N JCF 13
JCF C1 C1 C 0 1 Y N N N N N 22.544 97.635 10.854 -3.122 -0.255 0.002 C1 JCF 14
JCF C C C 0 1 N N N N N N 23.170 98.361 9.700 -4.586 0.100 0.004 C JCF 15
JCF H11N H11N H 0 0 N N N N N N 18.620 94.465 17.104 5.096 0.416 -0.004 H11N JCF 16
JCF H12N H12N H 0 0 N N N N N N 20.056 95.168 16.439 3.830 1.521 0.007 H12N JCF 17
JCF H5 H5 H 0 1 N N N N N N 21.199 95.337 14.889 1.250 -2.198 -0.011 H5 JCF 18
JCF H7 H7 H 0 1 N N N N N N 17.480 95.977 12.901 2.077 2.009 0.025 H7 JCF 19
JCF H H H 0 1 N N N N N N 19.067 97.582 10.202 -0.509 3.168 -0.849 H JCF 20
JCF H3 H3 H 0 1 N N N N N N 23.343 96.190 13.803 -1.120 -2.973 -0.015 H3 JCF 21
JCF H2 H2 H 0 1 N N N N N N 24.404 97.301 11.902 -3.506 -2.368 -0.011 H2 JCF 22
JCF HC1 HC1 H 0 1 N N N N N N 22.385 98.688 9.002 -4.939 0.179 1.033 HC1 JCF 23
JCF HC2 HC2 H 0 1 N N N N N N 23.717 99.239 10.073 -4.729 1.054 -0.504 HC2 JCF 24
JCF HC3 HC3 H 0 1 N N N N N N 23.867 97.689 9.179 -5.149 -0.676 -0.514 HC3 JCF 25
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JCF O1 C10 DOUB N N 1
JCF C10 N1 SING N N 2
JCF C10 C6 SING N N 3
JCF C6 C5 SING Y N 4
JCF C6 C7 DOUB Y N 5
JCF C5 C4 DOUB Y N 6
JCF C7 C8 SING Y N 7
JCF C8 O SING N N 8
JCF C8 C9 DOUB Y N 9
JCF C9 C4 SING Y N 10
JCF C9 N SING Y N 11
JCF C4 C3 SING Y N 12
JCF C3 C2 DOUB Y N 13
JCF C2 C1 SING Y N 14
JCF N C1 DOUB Y N 15
JCF C1 C SING N N 16
JCF N1 H11N SING N N 17
JCF N1 H12N SING N N 18
JCF C5 H5 SING N N 19
JCF C7 H7 SING N N 20
JCF O H SING N N 21
JCF C3 H3 SING N N 22
JCF C2 H2 SING N N 23
JCF C HC1 SING N N 24
JCF C HC2 SING N N 25
JCF C HC3 SING N N 26
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JCF SMILES ACDLabs 12.01 O=C(c1cc(O)c2nc(ccc2c1)C)N
JCF InChI InChI 1.03 InChI=1S/C11H10N2O2/c1-6-2-3-7-4-8(11(12)15)5-9(14)10(7)13-6/h2-5,14H,1H3,(H2,12,15)
JCF InChIKey InChI 1.03 CTRBRVRHXAPYCD-UHFFFAOYSA-N
JCF SMILES_CANONICAL CACTVS 3.385 Cc1ccc2cc(cc(O)c2n1)C(N)=O
JCF SMILES CACTVS 3.385 Cc1ccc2cc(cc(O)c2n1)C(N)=O
JCF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 Cc1ccc2cc(cc(c2n1)O)C(=O)N
JCF SMILES "OpenEye OEToolkits" 1.7.6 Cc1ccc2cc(cc(c2n1)O)C(=O)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JCF "SYSTEMATIC NAME" ACDLabs 12.01 8-hydroxy-2-methylquinoline-6-carboxamide
JCF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 2-methyl-8-oxidanyl-quinoline-6-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JCF 'Create component' 2014-12-04 EBI
JCF 'Initial release' 2015-10-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
JCF O1 O 5.104 3.232 1
JCF C10 C 5.104 1.732 2
JCF N1 N 3.805 0.983 3
JCF C6 C 6.404 0.983 4
JCF C5 C 7.702 1.732 5
JCF C7 C 6.404 -0.517 6
JCF C8 C 7.702 -1.268 7
JCF O O 7.702 -2.768 8
JCF C9 C 9.002 -0.517 9
JCF C4 C 9.002 0.983 10
JCF C3 C 10.342 1.784 11
JCF C2 C 11.701 1.014 12
JCF N N 10.342 -1.320 13
JCF C1 C 11.701 -0.549 14
JCF C C 12.998 -1.304 15
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
JCF O1 C10 DOUBLE NONE 1
JCF C10 N1 SINGLE NONE 2
JCF C10 C6 SINGLE NONE 3
JCF C6 C5 DOUBLE NONE 4
JCF C6 C7 SINGLE NONE 5
JCF C5 C4 SINGLE NONE 6
JCF C7 C8 DOUBLE NONE 7
JCF C8 O SINGLE NONE 8
JCF C8 C9 SINGLE NONE 9
JCF C9 C4 DOUBLE NONE 10
JCF C9 N SINGLE NONE 11
JCF C4 C3 SINGLE NONE 12
JCF C3 C2 DOUBLE NONE 13
JCF C2 C1 SINGLE NONE 14
JCF N C1 DOUBLE NONE 15
JCF C1 C SINGLE NONE 16
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
JCF MurckoScaffold S1 scaffold c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
JCF amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
JCF phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
JCF pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
JCF quinoline F4 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
JCF C6 S1 1
JCF C5 S1 1
JCF C7 S1 1
JCF C8 S1 1
JCF C9 S1 1
JCF C4 S1 1
JCF C3 S1 1
JCF C2 S1 1
JCF N S1 1
JCF C1 S1 1
JCF N1 F1 1
JCF C10 F1 1
JCF O1 F1 1
JCF C6 F1 1
JCF C6 F2 1
JCF C5 F2 1
JCF C4 F2 1
JCF C9 F2 1
JCF C8 F2 1
JCF C7 F2 1
JCF C9 F3 1
JCF C4 F3 1
JCF C3 F3 1
JCF C2 F3 1
JCF C1 F3 1
JCF N F3 1
JCF C6 F4 1
JCF C5 F4 1
JCF C4 F4 1
JCF C9 F4 1
JCF C8 F4 1
JCF C7 F4 1
JCF N F4 1
JCF C1 F4 1
JCF C2 F4 1
JCF C3 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id JCF
_pdbe_chem_comp_rdkit_properties.exactmw 202.074
_pdbe_chem_comp_rdkit_properties.amw 202.213
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 15
_pdbe_chem_comp_rdkit_properties.NumAtoms 25
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.091
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 100.611
_pdbe_chem_comp_rdkit_properties.tpsa 76.210
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.347
_pdbe_chem_comp_rdkit_properties.CrippenMR 53.315
_pdbe_chem_comp_rdkit_properties.chi0v 7.211
_pdbe_chem_comp_rdkit_properties.chi1v 3.829
_pdbe_chem_comp_rdkit_properties.chi2v 1.684
_pdbe_chem_comp_rdkit_properties.chi3v 1.684
_pdbe_chem_comp_rdkit_properties.chi4v 1.067
_pdbe_chem_comp_rdkit_properties.chi0n 17.211
_pdbe_chem_comp_rdkit_properties.chi1n 8.632
_pdbe_chem_comp_rdkit_properties.chi2n 1.684
_pdbe_chem_comp_rdkit_properties.chi3n 1.684
_pdbe_chem_comp_rdkit_properties.chi4n 1.067
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.100
_pdbe_chem_comp_rdkit_properties.kappa1 3.198
_pdbe_chem_comp_rdkit_properties.kappa2 3.237
_pdbe_chem_comp_rdkit_properties.kappa3 1.612
_pdbe_chem_comp_rdkit_properties.Phi 0.690
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
JCF UniChem ChEMBL CHEMBL3916938
JCF UniChem PDBe JCF
JCF UniChem ZINC ZINC000263620327
JCF UniChem PubChem 91936949
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
JCF O1 3.975 1.731 0.216 ETKDGv3 1
JCF C10 3.593 0.531 0.261 ETKDGv3 2
JCF N1 4.575 -0.503 0.363 ETKDGv3 3
JCF C6 2.144 0.214 0.195 ETKDGv3 4
JCF C5 1.278 1.100 -0.334 ETKDGv3 5
JCF C7 1.622 -1.074 0.729 ETKDGv3 6
JCF C8 0.312 -1.361 0.668 ETKDGv3 7
JCF O -0.178 -2.565 1.172 ETKDGv3 8
JCF C9 -0.626 -0.389 0.067 ETKDGv3 9
JCF C4 -0.166 0.786 -0.407 ETKDGv3 10
JCF C3 -1.120 1.745 -1.003 ETKDGv3 11
JCF C2 -2.421 1.441 -1.059 ETKDGv3 12
JCF N -2.031 -0.693 -0.009 ETKDGv3 13
JCF C1 -2.890 0.146 -0.516 ETKDGv3 14
JCF C -4.334 -0.227 -0.604 ETKDGv3 15
JCF H11N 4.328 -1.510 0.248 ETKDGv3 16
JCF H12N 5.584 -0.253 0.468 ETKDGv3 17
JCF H5 1.627 2.047 -0.728 ETKDGv3 18
JCF H7 2.294 -1.781 1.198 ETKDGv3 19
JCF H 0.432 -3.256 1.593 ETKDGv3 20
JCF H3 -0.770 2.691 -1.396 ETKDGv3 21
JCF H2 -3.123 2.139 -1.498 ETKDGv3 22
JCF HC1 -4.567 -1.058 0.095 ETKDGv3 23
JCF HC2 -4.969 0.645 -0.339 ETKDGv3 24
JCF HC3 -4.571 -0.548 -1.640 ETKDGv3 25
#