data_JFP
#
_chem_comp.id JFP
_chem_comp.name N-(4-methyl-1,3-thiazol-2-yl)propanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H10 N2 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-09-10
_chem_comp.pdbx_modified_date 2018-10-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 170.232
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code JFP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5QDJ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JFP C01 C1 C 0 1 N N N N N N -63.369 18.695 14.603 4.366 0.129 -0.002 C01 JFP 1
JFP C02 C2 C 0 1 N N N N N N -63.039 19.781 13.609 3.274 -0.943 0.001 C02 JFP 2
JFP C03 C3 C 0 1 N N N N N N -64.227 20.719 13.453 1.920 -0.281 -0.001 C03 JFP 3
JFP O04 O1 O 0 1 N N N N N N -65.335 20.391 13.821 1.837 0.929 -0.004 O04 JFP 4
JFP N05 N1 N 0 1 N N N N N N -64.015 21.987 12.905 0.802 -1.034 0.002 N05 JFP 5
JFP C06 C4 C 0 1 Y N N N N N -65.068 22.920 12.696 -0.447 -0.423 0.000 C06 JFP 6
JFP N07 N2 N 0 1 Y N N N N N -64.864 24.221 12.464 -1.580 -1.052 0.002 N07 JFP 7
JFP C08 C5 C 0 1 Y N N N N N -66.049 24.833 12.261 -2.673 -0.312 0.001 C08 JFP 8
JFP C09 C6 C 0 1 Y N N N N N -67.132 24.025 12.319 -2.453 1.004 -0.003 C09 JFP 9
JFP S10 S1 S 0 1 Y N N N N N -66.722 22.477 12.646 -0.711 1.266 0.003 S10 JFP 10
JFP C11 C7 C 0 1 N N N N N N -66.097 26.278 11.987 -4.058 -0.906 -0.003 C11 JFP 11
JFP H011 H1 H 0 0 N N N N N N -62.506 18.021 14.711 4.265 0.752 0.886 H011 JFP 12
JFP H012 H2 H 0 0 N N N N N N -63.603 19.149 15.577 5.345 -0.350 -0.001 H012 JFP 13
JFP H013 H3 H 0 0 N N N N N N -64.238 18.123 14.246 4.265 0.748 -0.894 H013 JFP 14
JFP H022 H4 H 0 0 N N N N N N -62.804 19.325 12.636 3.375 -1.566 -0.887 H022 JFP 15
JFP H021 H5 H 0 0 N N N N N N -62.169 20.351 13.967 3.375 -1.562 0.892 H021 JFP 16
JFP H051 H6 H 0 0 N N N N N N -63.084 22.249 12.649 0.869 -2.002 0.004 H051 JFP 17
JFP H091 H7 H 0 0 N N N N N N -68.147 24.362 12.167 -3.210 1.774 -0.005 H091 JFP 18
JFP H111 H8 H 0 0 N N N N N N -65.075 26.686 11.987 -4.388 -1.053 -1.032 H111 JFP 19
JFP H112 H9 H 0 0 N N N N N N -66.560 26.450 11.004 -4.044 -1.866 0.514 H112 JFP 20
JFP H113 H10 H 0 0 N N N N N N -66.692 26.779 12.765 -4.745 -0.230 0.506 H113 JFP 21
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JFP C11 C08 SING N N 1
JFP C08 C09 DOUB Y N 2
JFP C08 N07 SING Y N 3
JFP C09 S10 SING Y N 4
JFP N07 C06 DOUB Y N 5
JFP S10 C06 SING Y N 6
JFP C06 N05 SING N N 7
JFP N05 C03 SING N N 8
JFP C03 C02 SING N N 9
JFP C03 O04 DOUB N N 10
JFP C02 C01 SING N N 11
JFP C01 H011 SING N N 12
JFP C01 H012 SING N N 13
JFP C01 H013 SING N N 14
JFP C02 H022 SING N N 15
JFP C02 H021 SING N N 16
JFP N05 H051 SING N N 17
JFP C09 H091 SING N N 18
JFP C11 H111 SING N N 19
JFP C11 H112 SING N N 20
JFP C11 H113 SING N N 21
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JFP SMILES ACDLabs 12.01 CCC(=O)Nc1nc(cs1)C
JFP InChI InChI 1.03 InChI=1S/C7H10N2OS/c1-3-6(10)9-7-8-5(2)4-11-7/h4H,3H2,1-2H3,(H,8,9,10)
JFP InChIKey InChI 1.03 AIOZNYOAFODHNA-UHFFFAOYSA-N
JFP SMILES_CANONICAL CACTVS 3.385 CCC(=O)Nc1scc(C)n1
JFP SMILES CACTVS 3.385 CCC(=O)Nc1scc(C)n1
JFP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCC(=O)Nc1nc(cs1)C
JFP SMILES "OpenEye OEToolkits" 2.0.6 CCC(=O)Nc1nc(cs1)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JFP "SYSTEMATIC NAME" ACDLabs 12.01 N-(4-methyl-1,3-thiazol-2-yl)propanamide
JFP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-(4-methyl-1,3-thiazol-2-yl)propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JFP 'Create component' 2018-09-10 RCSB
JFP 'Initial release' 2018-10-10 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
JFP C01 C 11.936 0.763 1
JFP C02 C 10.822 -0.240 2
JFP C03 C 9.395 0.223 3
JFP O04 O 9.083 1.690 4
JFP N05 N 8.280 -0.781 5
JFP C06 C 6.854 -0.317 6
JFP N07 N 5.640 -1.199 7
JFP C08 C 4.427 -0.317 8
JFP C09 C 4.890 1.110 9
JFP S10 S 6.390 1.110 10
JFP C11 C 3.000 -0.781 11
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
JFP C11 C08 SINGLE NONE 1
JFP C08 C09 DOUBLE NONE 2
JFP C08 N07 SINGLE NONE 3
JFP C09 S10 SINGLE NONE 4
JFP N07 C06 DOUBLE NONE 5
JFP S10 C06 SINGLE NONE 6
JFP C06 N05 SINGLE NONE 7
JFP N05 C03 SINGLE NONE 8
JFP C03 C02 SINGLE NONE 9
JFP C03 O04 DOUBLE NONE 10
JFP C02 C01 SINGLE NONE 11
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
JFP MurckoScaffold S1 scaffold c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
JFP amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
JFP thiazole F2 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
JFP Z30820160 F3 fragment CCC(=O)Nc1nc(C)cs1 InChI=1S/C7H10N2OS/c1-3-6(10)9-7-8-5(2)4-11-7/h4H,3H2,1-2H3,(H,8,9,10) AIOZNYOAFODHNA-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
JFP C06 S1 1
JFP N07 S1 1
JFP C08 S1 1
JFP C09 S1 1
JFP S10 S1 1
JFP N05 F1 1
JFP C03 F1 1
JFP O04 F1 1
JFP C02 F1 1
JFP C09 F2 1
JFP C08 F2 1
JFP N07 F2 1
JFP C06 F2 1
JFP S10 F2 1
JFP C01 F3 1
JFP C02 F3 1
JFP C03 F3 1
JFP O04 F3 1
JFP N05 F3 1
JFP C06 F3 1
JFP N07 F3 1
JFP C08 F3 1
JFP C11 F3 1
JFP C09 F3 1
JFP S10 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id JFP
_pdbe_chem_comp_rdkit_properties.exactmw 170.051
_pdbe_chem_comp_rdkit_properties.amw 170.237
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 11
_pdbe_chem_comp_rdkit_properties.NumAtoms 21
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.429
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 83.570
_pdbe_chem_comp_rdkit_properties.tpsa 41.990
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.365
_pdbe_chem_comp_rdkit_properties.CrippenMR 44.682
_pdbe_chem_comp_rdkit_properties.chi0v 6.027
_pdbe_chem_comp_rdkit_properties.chi1v 3.323
_pdbe_chem_comp_rdkit_properties.chi2v 1.411
_pdbe_chem_comp_rdkit_properties.chi3v 1.411
_pdbe_chem_comp_rdkit_properties.chi4v 0.897
_pdbe_chem_comp_rdkit_properties.chi0n 15.211
_pdbe_chem_comp_rdkit_properties.chi1n 7.454
_pdbe_chem_comp_rdkit_properties.chi2n 0.751
_pdbe_chem_comp_rdkit_properties.chi3n 0.751
_pdbe_chem_comp_rdkit_properties.chi4n 0.398
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.900
_pdbe_chem_comp_rdkit_properties.kappa1 2.070
_pdbe_chem_comp_rdkit_properties.kappa2 3.479
_pdbe_chem_comp_rdkit_properties.kappa3 2.307
_pdbe_chem_comp_rdkit_properties.Phi 0.655
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
JFP UniChem ChEMBL CHEMBL4096653
JFP UniChem PDBe JFP
JFP UniChem ZINC ZINC000000069044
JFP UniChem eMolecules 5350262
JFP UniChem SureChEMBL SCHEMBL4097866
JFP UniChem PubChem 3613666
JFP UniChem Mcule MCULE-9548596266
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
JFP C01 -3.757 -0.094 0.568 ETKDGv3 1
JFP C02 -2.983 0.668 -0.501 ETKDGv3 2
JFP C03 -1.537 0.273 -0.489 ETKDGv3 3
JFP O04 -1.138 -0.626 -1.276 ETKDGv3 4
JFP N05 -0.635 0.887 0.446 ETKDGv3 5
JFP C06 0.761 0.573 0.542 ETKDGv3 6
JFP N07 1.356 -0.291 -0.218 ETKDGv3 7
JFP C08 2.756 -0.418 0.084 ETKDGv3 8
JFP C09 3.208 0.364 1.067 ETKDGv3 9
JFP S10 1.862 1.334 1.713 ETKDGv3 10
JFP C11 3.645 -1.337 -0.688 ETKDGv3 11
JFP H011 -4.825 0.210 0.541 ETKDGv3 12
JFP H012 -3.694 -1.188 0.384 ETKDGv3 13
JFP H013 -3.349 0.133 1.576 ETKDGv3 14
JFP H022 -3.424 0.453 -1.499 ETKDGv3 15
JFP H021 -3.074 1.760 -0.316 ETKDGv3 16
JFP H051 -1.013 1.606 1.102 ETKDGv3 17
JFP H091 4.234 0.402 1.409 ETKDGv3 18
JFP H111 4.242 -1.963 0.007 ETKDGv3 19
JFP H112 3.035 -2.003 -1.334 ETKDGv3 20
JFP H113 4.330 -0.742 -1.329 ETKDGv3 21
#