data_JLK
#
_chem_comp.id JLK
_chem_comp.name "(2~{R})-2-[[6-ethyl-5-(2-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H23 N3 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-03-11
_chem_comp.pdbx_modified_date 2019-08-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 417.523
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code JLK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6QZB
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JLK N10 N1 N 0 1 N N N N N N -5.675 0.511 4.511 -0.860 -0.679 0.546 N10 JLK 1
JLK C11 C1 C 0 1 N N R N N N -4.942 -0.638 3.928 -2.194 -1.157 0.916 C11 JLK 2
JLK C13 C2 C 0 1 N N N N N N -5.230 -1.993 4.654 -2.136 -1.805 2.275 C13 JLK 3
JLK C18 C3 C 0 1 Y N N N N N -8.020 2.572 4.651 1.373 1.250 0.654 C18 JLK 4
JLK C19 C4 C 0 1 Y N N N N N -9.179 2.485 2.102 0.161 3.316 2.042 C19 JLK 5
JLK C20 C5 C 0 1 Y N N N N N -9.326 1.384 2.945 0.754 2.275 2.735 C20 JLK 6
JLK C21 C6 C 0 1 Y N N N N N -8.759 1.457 4.209 1.360 1.243 2.049 C21 JLK 7
JLK C22 C7 C 0 1 Y N N N N N -8.446 3.614 2.508 0.177 3.331 0.659 C22 JLK 8
JLK C23 C8 C 0 1 Y N N N N N -7.855 3.653 3.777 0.780 2.304 -0.038 C23 JLK 9
JLK C24 C9 C 0 1 N N N N N N -7.077 4.846 4.201 0.796 2.322 -1.545 C24 JLK 10
JLK C25 C10 C 0 1 Y N N N N N -4.779 0.505 1.785 -3.319 0.595 -0.432 C25 JLK 11
JLK C27 C11 C 0 1 Y N N N N N -2.908 1.796 0.976 -2.700 2.206 -2.091 C27 JLK 12
JLK C28 C12 C 0 1 Y N N N N N -3.749 2.837 0.574 -3.599 1.640 -2.976 C28 JLK 13
JLK C29 C13 C 0 1 Y N N N N N -5.112 2.697 0.779 -4.355 0.549 -2.590 C29 JLK 14
JLK C30 C14 C 0 1 Y N N N N N -5.627 1.535 1.397 -4.215 0.026 -1.318 C30 JLK 15
JLK C9 C15 C 0 1 Y N N N N N -7.430 2.579 6.007 2.022 0.144 -0.089 C9 JLK 16
JLK C5 C16 C 0 1 Y N N N N N -6.360 1.742 6.440 1.332 -1.096 -0.421 C5 JLK 17
JLK C8 C17 C 0 1 Y N N N N N -7.901 3.349 7.047 3.283 0.202 -0.513 C8 JLK 18
JLK C16 C18 C 0 1 N N N N N N -9.056 4.324 6.944 4.200 1.379 -0.297 C16 JLK 19
JLK C17 C19 C 0 1 N N N N N N -9.929 4.400 8.154 4.956 1.201 1.021 C17 JLK 20
JLK S7 S1 S 0 1 Y N N N N N -7.054 3.131 8.508 3.741 -1.266 -1.355 S7 JLK 21
JLK C6 C20 C 0 1 Y N N N N N -6.074 1.964 7.782 2.152 -1.981 -1.122 C6 JLK 22
JLK N3 N2 N 0 1 Y N N N N N -5.040 1.347 8.419 1.657 -3.168 -1.499 N3 JLK 23
JLK C2 C21 C 0 1 Y N N N N N -4.286 0.476 7.751 0.420 -3.505 -1.220 C2 JLK 24
JLK N1 N3 N 0 1 Y N N N N N -4.516 0.174 6.477 -0.395 -2.703 -0.559 N1 JLK 25
JLK C4 C22 C 0 1 Y N N N N N -5.507 0.817 5.793 0.005 -1.509 -0.146 C4 JLK 26
JLK O15 O1 O 0 1 N N N N N N -6.332 -2.125 5.208 -3.250 -2.318 2.822 O15 JLK 27
JLK O14 O2 O 0 1 N N N N N N -4.406 -2.933 4.527 -1.088 -1.862 2.874 O14 JLK 28
JLK C12 C23 C 0 1 N N N N N N -5.294 -0.767 2.463 -3.166 0.024 0.955 C12 JLK 29
JLK C26 C24 C 0 1 Y N N N N N -3.423 0.650 1.573 -2.560 1.683 -0.819 C26 JLK 30
JLK H1 H1 H 0 1 N N N N N N -5.414 1.319 3.983 -0.584 0.220 0.782 H1 JLK 31
JLK H2 H2 H 0 1 N N N N N N -3.862 -0.442 4.006 -2.536 -1.885 0.181 H2 JLK 32
JLK H3 H3 H 0 1 N N N N N N -9.635 2.470 1.123 -0.312 4.122 2.584 H3 JLK 33
JLK H4 H4 H 0 1 N N N N N N -9.863 0.504 2.625 0.739 2.268 3.815 H4 JLK 34
JLK H5 H5 H 0 1 N N N N N N -8.890 0.623 4.883 1.822 0.431 2.590 H5 JLK 35
JLK H6 H6 H 0 1 N N N N N N -8.338 4.455 1.838 -0.288 4.146 0.124 H6 JLK 36
JLK H7 H7 H 0 1 N N N N N N -7.749 5.569 4.686 1.726 2.772 -1.893 H7 JLK 37
JLK H8 H8 H 0 1 N N N N N N -6.294 4.540 4.911 0.722 1.302 -1.922 H8 JLK 38
JLK H9 H9 H 0 1 N N N N N N -6.611 5.312 3.320 -0.049 2.906 -1.911 H9 JLK 39
JLK H10 H10 H 0 1 N N N N N N -1.843 1.882 0.821 -2.107 3.056 -2.394 H10 JLK 40
JLK H11 H11 H 0 1 N N N N N N -3.347 3.728 0.115 -3.709 2.049 -3.969 H11 JLK 41
JLK H12 H12 H 0 1 N N N N N N -5.785 3.481 0.465 -5.058 0.107 -3.281 H12 JLK 42
JLK H13 H13 H 0 1 N N N N N N -6.690 1.447 1.569 -4.805 -0.827 -1.016 H13 JLK 43
JLK H14 H14 H 0 1 N N N N N N -8.641 5.326 6.759 4.913 1.440 -1.120 H14 JLK 44
JLK H15 H15 H 0 1 N N N N N N -9.681 4.023 6.091 3.611 2.295 -0.258 H15 JLK 45
JLK H16 H16 H 0 1 N N N N N N -10.733 5.131 7.981 5.619 2.052 1.177 H16 JLK 46
JLK H17 H17 H 0 1 N N N N N N -10.368 3.411 8.352 4.243 1.140 1.843 H17 JLK 47
JLK H18 H18 H 0 1 N N N N N N -9.328 4.714 9.020 5.544 0.284 0.982 H18 JLK 48
JLK H19 H19 H 0 1 N N N N N N -3.461 -0.000 8.261 0.056 -4.470 -1.541 H19 JLK 49
JLK H20 H20 H 0 1 N N N N N N -6.433 -3.022 5.504 -3.163 -2.724 3.695 H20 JLK 50
JLK H21 H21 H 0 1 N N N N N N -6.384 -0.851 2.339 -4.136 -0.315 1.317 H21 JLK 51
JLK H22 H22 H 0 1 N N N N N N -4.807 -1.653 2.031 -2.777 0.793 1.623 H22 JLK 52
JLK H23 H23 H 0 1 N N N N N N -2.751 -0.139 1.876 -1.857 2.125 -0.128 H23 JLK 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JLK C28 C29 DOUB Y N 1
JLK C28 C27 SING Y N 2
JLK C29 C30 SING Y N 3
JLK C27 C26 DOUB Y N 4
JLK C30 C25 DOUB Y N 5
JLK C26 C25 SING Y N 6
JLK C25 C12 SING N N 7
JLK C19 C22 DOUB Y N 8
JLK C19 C20 SING Y N 9
JLK C12 C11 SING N N 10
JLK C22 C23 SING Y N 11
JLK C20 C21 DOUB Y N 12
JLK C23 C24 SING N N 13
JLK C23 C18 DOUB Y N 14
JLK C11 N10 SING N N 15
JLK C11 C13 SING N N 16
JLK C21 C18 SING Y N 17
JLK N10 C4 SING N N 18
JLK O14 C13 DOUB N N 19
JLK C18 C9 SING N N 20
JLK C13 O15 SING N N 21
JLK C4 C5 DOUB Y N 22
JLK C4 N1 SING Y N 23
JLK C9 C5 SING Y N 24
JLK C9 C8 DOUB Y N 25
JLK C5 C6 SING Y N 26
JLK N1 C2 DOUB Y N 27
JLK C16 C8 SING N N 28
JLK C16 C17 SING N N 29
JLK C8 S7 SING Y N 30
JLK C2 N3 SING Y N 31
JLK C6 N3 DOUB Y N 32
JLK C6 S7 SING Y N 33
JLK N10 H1 SING N N 34
JLK C11 H2 SING N N 35
JLK C19 H3 SING N N 36
JLK C20 H4 SING N N 37
JLK C21 H5 SING N N 38
JLK C22 H6 SING N N 39
JLK C24 H7 SING N N 40
JLK C24 H8 SING N N 41
JLK C24 H9 SING N N 42
JLK C27 H10 SING N N 43
JLK C28 H11 SING N N 44
JLK C29 H12 SING N N 45
JLK C30 H13 SING N N 46
JLK C16 H14 SING N N 47
JLK C16 H15 SING N N 48
JLK C17 H16 SING N N 49
JLK C17 H17 SING N N 50
JLK C17 H18 SING N N 51
JLK C2 H19 SING N N 52
JLK O15 H20 SING N N 53
JLK C12 H21 SING N N 54
JLK C12 H22 SING N N 55
JLK C26 H23 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JLK InChI InChI 1.03 InChI=1S/C24H23N3O2S/c1-3-19-20(17-12-8-7-9-15(17)2)21-22(25-14-26-23(21)30-19)27-18(24(28)29)13-16-10-5-4-6-11-16/h4-12,14,18H,3,13H2,1-2H3,(H,28,29)(H,25,26,27)/t18-/m1/s1
JLK InChIKey InChI 1.03 BJYZTAWEBOABQO-GOSISDBHSA-N
JLK SMILES_CANONICAL CACTVS 3.385 CCc1sc2ncnc(N[C@H](Cc3ccccc3)C(O)=O)c2c1c4ccccc4C
JLK SMILES CACTVS 3.385 CCc1sc2ncnc(N[CH](Cc3ccccc3)C(O)=O)c2c1c4ccccc4C
JLK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCc1c(c2c(ncnc2s1)N[C@H](Cc3ccccc3)C(=O)O)c4ccccc4C
JLK SMILES "OpenEye OEToolkits" 2.0.7 CCc1c(c2c(ncnc2s1)NC(Cc3ccccc3)C(=O)O)c4ccccc4C
#
_pdbx_chem_comp_identifier.comp_id JLK
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"(2~{R})-2-[[6-ethyl-5-(2-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JLK 'Create component' 2019-03-11 RCSB
JLK 'Initial release' 2019-08-07 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
JLK N10 N 8.196 -0.375 1
JLK C11 C 6.897 0.375 2
JLK C13 C 5.598 -0.375 3
JLK C18 C 11.380 -0.742 4
JLK C19 C 12.312 2.110 5
JLK C20 C 10.845 1.800 6
JLK C21 C 10.379 0.374 7
JLK C22 C 13.314 0.993 8
JLK C23 C 12.848 -0.433 9
JLK C24 C 13.850 -1.549 10
JLK C25 C 5.598 2.625 11
JLK C27 C 4.299 4.875 12
JLK C28 C 3.000 4.125 13
JLK C29 C 3.000 2.625 14
JLK C30 C 4.299 1.875 15
JLK C9 C 10.915 -2.168 16
JLK C5 C 9.495 -2.625 17
JLK C8 C 11.790 -3.375 18
JLK C16 C 13.290 -3.375 19
JLK C17 C 14.040 -4.674 20
JLK S7 S 10.915 -4.582 21
JLK C6 C 9.495 -4.125 22
JLK N3 N 8.196 -4.875 23
JLK C2 C 6.897 -4.125 24
JLK N1 N 6.897 -2.625 25
JLK C4 C 8.196 -1.875 26
JLK O15 O 5.598 -1.875 27
JLK O14 O 4.299 0.375 28
JLK C12 C 6.897 1.875 29
JLK C26 C 5.598 4.125 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
JLK C28 C29 SINGLE NONE 1
JLK C28 C27 DOUBLE NONE 2
JLK C29 C30 DOUBLE NONE 3
JLK C27 C26 SINGLE NONE 4
JLK C30 C25 SINGLE NONE 5
JLK C26 C25 DOUBLE NONE 6
JLK C25 C12 SINGLE NONE 7
JLK C19 C22 DOUBLE NONE 8
JLK C19 C20 SINGLE NONE 9
JLK C11 C12 SINGLE BEGINWEDGE 10
JLK C22 C23 SINGLE NONE 11
JLK C20 C21 DOUBLE NONE 12
JLK C23 C24 SINGLE NONE 13
JLK C23 C18 DOUBLE NONE 14
JLK C11 N10 SINGLE NONE 15
JLK C11 C13 SINGLE NONE 16
JLK C21 C18 SINGLE NONE 17
JLK N10 C4 SINGLE NONE 18
JLK O14 C13 DOUBLE NONE 19
JLK C18 C9 SINGLE NONE 20
JLK C13 O15 SINGLE NONE 21
JLK C4 C5 DOUBLE NONE 22
JLK C4 N1 SINGLE NONE 23
JLK C9 C5 SINGLE NONE 24
JLK C9 C8 DOUBLE NONE 25
JLK C5 C6 SINGLE NONE 26
JLK N1 C2 DOUBLE NONE 27
JLK C16 C8 SINGLE NONE 28
JLK C16 C17 SINGLE NONE 29
JLK C8 S7 SINGLE NONE 30
JLK C2 N3 SINGLE NONE 31
JLK C6 N3 DOUBLE NONE 32
JLK C6 S7 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
JLK MurckoScaffold S1 scaffold c1ccc(CCNc2ncnc3scc(-c4ccccc4)c23)cc1 InChI=1S/C20H17N3S/c1-3-7-15(8-4-1)11-12-21-19-18-17(16-9-5-2-6-10-16)13-24-20(18)23-14-22-19/h1-10,13-14H,11-12H2,(H,21,22,23) ILVDDKSLDQUPSP-UHFFFAOYSA-N
JLK peptide F1 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
JLK phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
JLK pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
JLK thiophen F4 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
JLK N10 S1 1
JLK C11 S1 1
JLK C18 S1 1
JLK C19 S1 1
JLK C20 S1 1
JLK C21 S1 1
JLK C22 S1 1
JLK C23 S1 1
JLK C25 S1 1
JLK C27 S1 1
JLK C28 S1 1
JLK C29 S1 1
JLK C30 S1 1
JLK C9 S1 1
JLK C5 S1 1
JLK C8 S1 1
JLK S7 S1 1
JLK C6 S1 1
JLK N3 S1 1
JLK C2 S1 1
JLK N1 S1 1
JLK C4 S1 1
JLK C12 S1 1
JLK C26 S1 1
JLK O14 F1 1
JLK C13 F1 1
JLK C11 F1 1
JLK N10 F1 1
JLK C18 F2 1
JLK C23 F2 1
JLK C22 F2 1
JLK C19 F2 1
JLK C20 F2 1
JLK C21 F2 1
JLK C25 F2 2
JLK C30 F2 2
JLK C29 F2 2
JLK C28 F2 2
JLK C27 F2 2
JLK C26 F2 2
JLK C5 F3 1
JLK C4 F3 1
JLK N1 F3 1
JLK C2 F3 1
JLK N3 F3 1
JLK C6 F3 1
JLK C8 F4 1
JLK C9 F4 1
JLK C5 F4 1
JLK C6 F4 1
JLK S7 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id JLK
_pdbe_chem_comp_rdkit_properties.exactmw 417.151
_pdbe_chem_comp_rdkit_properties.amw 417.534
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.208
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 211.461
_pdbe_chem_comp_rdkit_properties.tpsa 75.110
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.984
_pdbe_chem_comp_rdkit_properties.CrippenMR 117.009
_pdbe_chem_comp_rdkit_properties.chi0v 15.383
_pdbe_chem_comp_rdkit_properties.chi1v 8.725
_pdbe_chem_comp_rdkit_properties.chi2v 4.625
_pdbe_chem_comp_rdkit_properties.chi3v 4.625
_pdbe_chem_comp_rdkit_properties.chi4v 3.380
_pdbe_chem_comp_rdkit_properties.chi0n 37.566
_pdbe_chem_comp_rdkit_properties.chi1n 19.264
_pdbe_chem_comp_rdkit_properties.chi2n 3.626
_pdbe_chem_comp_rdkit_properties.chi3n 3.626
_pdbe_chem_comp_rdkit_properties.chi4n 2.448
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.250
_pdbe_chem_comp_rdkit_properties.kappa1 6.374
_pdbe_chem_comp_rdkit_properties.kappa2 8.631
_pdbe_chem_comp_rdkit_properties.kappa3 3.910
_pdbe_chem_comp_rdkit_properties.Phi 1.834
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
JLK UniChem ChEMBL CHEMBL4458675
JLK UniChem PDBe JLK
JLK UniChem PubChem 138756814
JLK UniChem BindingDb 50519014
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
JLK N10 0.852 1.385 0.320 ETKDGv3 1
JLK C11 1.910 1.888 1.202 ETKDGv3 2
JLK C13 1.541 1.662 2.644 ETKDGv3 3
JLK C18 -1.615 -0.356 -0.299 ETKDGv3 4
JLK C19 -1.460 -2.172 1.860 ETKDGv3 5
JLK C20 -0.862 -2.522 0.559 ETKDGv3 6
JLK C21 -0.938 -1.665 -0.465 ETKDGv3 7
JLK C22 -2.082 -0.998 2.020 ETKDGv3 8
JLK C23 -2.173 -0.034 0.894 ETKDGv3 9
JLK C24 -2.835 1.298 1.122 ETKDGv3 10
JLK C25 3.208 -0.281 0.901 ETKDGv3 11
JLK C27 2.746 -2.460 -0.121 ETKDGv3 12
JLK C28 2.960 -3.095 1.037 ETKDGv3 13
JLK C29 3.333 -2.328 2.242 ETKDGv3 14
JLK C30 3.454 -0.996 2.179 ETKDGv3 15
JLK C9 -1.611 0.585 -1.437 ETKDGv3 16
JLK C5 -0.597 1.674 -1.640 ETKDGv3 17
JLK C8 -2.557 0.536 -2.403 ETKDGv3 18
JLK C16 -3.689 -0.451 -2.478 ETKDGv3 19
JLK C17 -3.318 -1.636 -3.363 ETKDGv3 20
JLK S7 -2.306 1.785 -3.665 ETKDGv3 21
JLK C6 -0.877 2.427 -2.857 ETKDGv3 22
JLK N3 -0.163 3.437 -3.245 ETKDGv3 23
JLK C2 0.961 3.833 -2.444 ETKDGv3 24
JLK N1 1.247 3.186 -1.348 ETKDGv3 25
JLK C4 0.466 2.057 -0.891 ETKDGv3 26
JLK O15 0.770 0.563 3.014 ETKDGv3 27
JLK O14 1.968 2.451 3.529 ETKDGv3 28
JLK C12 3.262 1.228 0.857 ETKDGv3 29
JLK C26 2.873 -0.990 -0.194 ETKDGv3 30
JLK H1 0.562 0.401 0.475 ETKDGv3 31
JLK H2 2.019 2.986 1.063 ETKDGv3 32
JLK H3 -1.392 -2.867 2.687 ETKDGv3 33
JLK H4 -0.354 -3.470 0.437 ETKDGv3 34
JLK H5 -0.479 -1.922 -1.412 ETKDGv3 35
JLK H6 -2.511 -0.752 2.983 ETKDGv3 36
JLK H7 -3.330 1.334 2.115 ETKDGv3 37
JLK H8 -3.609 1.479 0.346 ETKDGv3 38
JLK H9 -2.075 2.106 1.079 ETKDGv3 39
JLK H10 2.467 -3.020 -1.004 ETKDGv3 40
JLK H11 2.859 -4.171 1.093 ETKDGv3 41
JLK H12 3.506 -2.845 3.177 ETKDGv3 42
JLK H13 3.723 -0.440 3.069 ETKDGv3 43
JLK H14 -4.579 0.056 -2.906 ETKDGv3 44
JLK H15 -3.970 -0.815 -1.466 ETKDGv3 45
JLK H16 -4.176 -2.339 -3.420 ETKDGv3 46
JLK H17 -2.445 -2.176 -2.944 ETKDGv3 47
JLK H18 -3.075 -1.289 -4.390 ETKDGv3 48
JLK H19 1.571 4.671 -2.749 ETKDGv3 49
JLK H20 0.533 0.397 3.985 ETKDGv3 50
JLK H21 3.576 1.562 -0.156 ETKDGv3 51
JLK H22 4.042 1.592 1.561 ETKDGv3 52
JLK H23 2.668 -0.491 -1.134 ETKDGv3 53
#