data_JR7
#
_chem_comp.id JR7
_chem_comp.name N-[4-(4-chlorophenyl)-1,3-thiazol-2-yl]propanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H11 Cl N2 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-09-18
_chem_comp.pdbx_modified_date 2019-02-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 266.747
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code JR7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6MHB
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JR7 C1 C1 C 0 1 N N N N N N -5.875 6.456 -2.992 -5.441 -1.532 -0.003 C1 JR7 1
JR7 C3 C2 C 0 1 Y N N N N N -2.598 8.151 -2.079 -1.940 -0.171 -0.004 C3 JR7 2
JR7 C4 C3 C 0 1 Y N N N N N -0.439 8.754 -1.778 0.203 0.465 0.004 C4 JR7 3
JR7 C11 C4 C 0 1 Y N N N N N -0.860 8.864 -0.490 -0.306 1.710 0.001 C11 JR7 4
JR7 O O1 O 0 1 N N N N N N -5.086 7.110 -0.859 -4.473 0.620 0.003 O JR7 5
JR7 C2 C5 C 0 1 N N N N N N -4.890 7.077 -2.052 -4.276 -0.577 -0.002 C2 JR7 6
JR7 C C6 C 0 1 N N N N N N -6.186 5.005 -2.562 -6.750 -0.740 0.002 C JR7 7
JR7 N N1 N 0 1 N N N N N N -3.717 7.570 -2.687 -3.015 -1.052 -0.005 N JR7 8
JR7 S S1 S 0 1 Y N N N N N -2.523 8.451 -0.326 -2.064 1.585 0.002 S JR7 9
JR7 N1 N2 N 0 1 Y N N N N N -1.451 8.360 -2.703 -0.690 -0.515 -0.003 N1 JR7 10
JR7 C5 C7 C 0 1 Y N N N N N 0.891 9.065 -2.330 1.664 0.206 0.003 C5 JR7 11
JR7 C10 C8 C 0 1 Y N N N N N 1.860 9.759 -1.585 2.142 -1.103 0.006 C10 JR7 12
JR7 C9 C9 C 0 1 Y N N N N N 3.130 9.973 -2.124 3.502 -1.338 0.005 C9 JR7 13
JR7 C8 C10 C 0 1 Y N N N N N 3.424 9.484 -3.414 4.390 -0.276 0.001 C8 JR7 14
JR7 CL CL1 CL 0 0 N N N N N N 4.976 9.750 -4.099 6.100 -0.579 -0.001 CL JR7 15
JR7 C7 C11 C 0 1 Y N N N N N 2.503 8.799 -4.169 3.920 1.026 -0.003 C7 JR7 16
JR7 C6 C12 C 0 1 Y N N N N N 1.238 8.577 -3.630 2.562 1.272 -0.008 C6 JR7 17
JR7 H3 H1 H 0 1 N N N N N N -5.453 6.451 -4.008 -5.398 -2.157 -0.895 H3 JR7 18
JR7 H4 H2 H 0 1 N N N N N N -6.805 7.044 -2.984 -5.395 -2.163 0.885 H4 JR7 19
JR7 H10 H3 H 0 1 N N N N N N -0.228 9.173 0.330 0.263 2.627 0.004 H10 JR7 20
JR7 H H4 H 0 1 N N N N N N -6.910 4.562 -3.261 -6.797 -0.109 -0.886 H JR7 21
JR7 H2 H5 H 0 1 N N N N N N -5.259 4.413 -2.571 -7.593 -1.431 0.001 H2 JR7 22
JR7 H1 H6 H 0 1 N N N N N N -6.610 5.006 -1.547 -6.793 -0.116 0.894 H1 JR7 23
JR7 H5 H7 H 0 1 N N N N N N -3.688 7.493 -3.684 -2.857 -2.009 -0.009 H5 JR7 24
JR7 H9 H8 H 0 1 N N N N N N 1.623 10.126 -0.597 1.449 -1.932 0.010 H9 JR7 25
JR7 H8 H9 H 0 1 N N N N N N 3.880 10.507 -1.559 3.873 -2.352 0.008 H8 JR7 26
JR7 H7 H10 H 0 1 N N N N N N 2.754 8.441 -5.157 4.618 1.850 -0.011 H7 JR7 27
JR7 H6 H11 H 0 1 N N N N N N 0.506 8.027 -4.203 2.197 2.288 -0.010 H6 JR7 28
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JR7 C7 C6 DOUB Y N 1
JR7 C7 C8 SING Y N 2
JR7 CL C8 SING N N 3
JR7 C6 C5 SING Y N 4
JR7 C8 C9 DOUB Y N 5
JR7 C1 C SING N N 6
JR7 C1 C2 SING N N 7
JR7 N1 C3 DOUB Y N 8
JR7 N1 C4 SING Y N 9
JR7 N C3 SING N N 10
JR7 N C2 SING N N 11
JR7 C5 C4 SING N N 12
JR7 C5 C10 DOUB Y N 13
JR7 C9 C10 SING Y N 14
JR7 C3 S SING Y N 15
JR7 C2 O DOUB N N 16
JR7 C4 C11 DOUB Y N 17
JR7 C11 S SING Y N 18
JR7 C1 H3 SING N N 19
JR7 C1 H4 SING N N 20
JR7 C11 H10 SING N N 21
JR7 C H SING N N 22
JR7 C H2 SING N N 23
JR7 C H1 SING N N 24
JR7 N H5 SING N N 25
JR7 C10 H9 SING N N 26
JR7 C9 H8 SING N N 27
JR7 C7 H7 SING N N 28
JR7 C6 H6 SING N N 29
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JR7 SMILES ACDLabs 12.01 C(C)C(=O)Nc1scc(n1)c2ccc(Cl)cc2
JR7 InChI InChI 1.03 InChI=1S/C12H11ClN2OS/c1-2-11(16)15-12-14-10(7-17-12)8-3-5-9(13)6-4-8/h3-7H,2H2,1H3,(H,14,15,16)
JR7 InChIKey InChI 1.03 NRCYQWNSXCXBPN-UHFFFAOYSA-N
JR7 SMILES_CANONICAL CACTVS 3.385 CCC(=O)Nc1scc(n1)c2ccc(Cl)cc2
JR7 SMILES CACTVS 3.385 CCC(=O)Nc1scc(n1)c2ccc(Cl)cc2
JR7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCC(=O)Nc1nc(cs1)c2ccc(cc2)Cl
JR7 SMILES "OpenEye OEToolkits" 2.0.6 CCC(=O)Nc1nc(cs1)c2ccc(cc2)Cl
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JR7 "SYSTEMATIC NAME" ACDLabs 12.01 N-[4-(4-chlorophenyl)-1,3-thiazol-2-yl]propanamide
JR7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[4-(4-chlorophenyl)-1,3-thiazol-2-yl]propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JR7 'Create component' 2018-09-18 RCSB
JR7 'Initial release' 2019-02-20 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
JR7 C1 C 3.653 5.368 1
JR7 C3 C 4.807 1.570 2
JR7 C4 C 5.557 -0.738 3
JR7 C11 C 6.770 0.144 4
JR7 O O 6.027 4.311 5
JR7 C2 C 4.535 4.154 6
JR7 C C 4.263 6.738 7
JR7 N N 3.925 2.784 8
JR7 S S 6.307 1.570 9
JR7 N1 N 4.343 0.144 10
JR7 C5 C 5.557 -2.238 11
JR7 C10 C 6.856 -2.988 12
JR7 C9 C 6.856 -4.488 13
JR7 C8 C 5.557 -5.238 14
JR7 CL Cl 5.557 -6.738 15
JR7 C7 C 4.258 -4.488 16
JR7 C6 C 4.258 -2.988 17
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
JR7 C7 C6 DOUBLE NONE 1
JR7 C7 C8 SINGLE NONE 2
JR7 CL C8 SINGLE NONE 3
JR7 C6 C5 SINGLE NONE 4
JR7 C8 C9 DOUBLE NONE 5
JR7 C1 C SINGLE NONE 6
JR7 C1 C2 SINGLE NONE 7
JR7 N1 C3 DOUBLE NONE 8
JR7 N1 C4 SINGLE NONE 9
JR7 N C3 SINGLE NONE 10
JR7 N C2 SINGLE NONE 11
JR7 C5 C4 SINGLE NONE 12
JR7 C5 C10 DOUBLE NONE 13
JR7 C9 C10 SINGLE NONE 14
JR7 C3 S SINGLE NONE 15
JR7 C2 O DOUBLE NONE 16
JR7 C4 C11 DOUBLE NONE 17
JR7 C11 S SINGLE NONE 18
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
JR7 MurckoScaffold S1 scaffold c1ccc(-c2cscn2)cc1 InChI=1S/C9H7NS/c1-2-4-8(5-3-1)9-6-11-7-10-9/h1-7H KXCQDIWJQBSUJF-UHFFFAOYSA-N
JR7 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
JR7 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
JR7 thiazole F3 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
JR7 Z30820160 F4 fragment CCC(=O)Nc1nc(C)cs1 InChI=1S/C7H10N2OS/c1-3-6(10)9-7-8-5(2)4-11-7/h4H,3H2,1-2H3,(H,8,9,10) AIOZNYOAFODHNA-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
JR7 C3 S1 1
JR7 C4 S1 1
JR7 C11 S1 1
JR7 S S1 1
JR7 N1 S1 1
JR7 C5 S1 1
JR7 C10 S1 1
JR7 C9 S1 1
JR7 C8 S1 1
JR7 C7 S1 1
JR7 C6 S1 1
JR7 N F1 1
JR7 C2 F1 1
JR7 O F1 1
JR7 C1 F1 1
JR7 C5 F2 1
JR7 C6 F2 1
JR7 C7 F2 1
JR7 C8 F2 1
JR7 C9 F2 1
JR7 C10 F2 1
JR7 C11 F3 1
JR7 C4 F3 1
JR7 N1 F3 1
JR7 C3 F3 1
JR7 S F3 1
JR7 C F4 1
JR7 C1 F4 1
JR7 C2 F4 1
JR7 O F4 1
JR7 N F4 1
JR7 C3 F4 1
JR7 N1 F4 1
JR7 C4 F4 1
JR7 C5 F4 1
JR7 C11 F4 1
JR7 S F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id JR7
_pdbe_chem_comp_rdkit_properties.exactmw 266.028
_pdbe_chem_comp_rdkit_properties.amw 266.753
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 17
_pdbe_chem_comp_rdkit_properties.NumAtoms 28
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.167
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 123.971
_pdbe_chem_comp_rdkit_properties.tpsa 41.990
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.051
_pdbe_chem_comp_rdkit_properties.CrippenMR 69.335
_pdbe_chem_comp_rdkit_properties.chi0v 9.661
_pdbe_chem_comp_rdkit_properties.chi1v 5.390
_pdbe_chem_comp_rdkit_properties.chi2v 2.431
_pdbe_chem_comp_rdkit_properties.chi3v 2.431
_pdbe_chem_comp_rdkit_properties.chi4v 1.616
_pdbe_chem_comp_rdkit_properties.chi0n 19.089
_pdbe_chem_comp_rdkit_properties.chi1n 9.643
_pdbe_chem_comp_rdkit_properties.chi2n 1.582
_pdbe_chem_comp_rdkit_properties.chi3n 1.582
_pdbe_chem_comp_rdkit_properties.chi4n 0.920
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.390
_pdbe_chem_comp_rdkit_properties.kappa1 4.371
_pdbe_chem_comp_rdkit_properties.kappa2 5.294
_pdbe_chem_comp_rdkit_properties.kappa3 3.048
_pdbe_chem_comp_rdkit_properties.Phi 1.361
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
JR7 UniChem PDBe JR7
JR7 UniChem ZINC ZINC000005008289
JR7 UniChem PubChem 3143144
JR7 UniChem eMolecules 1399386
JR7 UniChem SureChEMBL SCHEMBL14085829
JR7 UniChem Mcule MCULE-8139853540
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
JR7 C1 4.389 0.663 0.683 ETKDGv3 1
JR7 C3 1.076 -1.325 0.259 ETKDGv3 2
JR7 C4 -1.186 -1.080 0.067 ETKDGv3 3
JR7 C11 -1.165 -2.416 -0.028 ETKDGv3 4
JR7 O 2.117 1.359 0.489 ETKDGv3 5
JR7 C2 2.922 0.390 0.538 ETKDGv3 6
JR7 C 5.069 0.680 -0.681 ETKDGv3 7
JR7 N 2.454 -0.962 0.412 ETKDGv3 8
JR7 S 0.513 -3.000 0.088 ETKDGv3 9
JR7 N1 0.107 -0.467 0.230 ETKDGv3 10
JR7 C5 -2.425 -0.261 -0.002 ETKDGv3 11
JR7 C10 -2.343 1.066 -0.222 ETKDGv3 12
JR7 C9 -3.564 1.895 -0.297 ETKDGv3 13
JR7 C8 -4.768 1.333 -0.140 ETKDGv3 14
JR7 CL -6.220 2.313 -0.229 ETKDGv3 15
JR7 C7 -4.875 -0.117 0.116 ETKDGv3 16
JR7 C6 -3.772 -0.872 0.183 ETKDGv3 17
JR7 H3 4.854 -0.121 1.319 ETKDGv3 18
JR7 H4 4.542 1.645 1.182 ETKDGv3 19
JR7 H10 -2.022 -3.057 -0.181 ETKDGv3 20
JR7 H 4.951 -0.304 -1.184 ETKDGv3 21
JR7 H2 6.152 0.886 -0.554 ETKDGv3 22
JR7 H1 4.628 1.474 -1.322 ETKDGv3 23
JR7 H5 3.157 -1.735 0.428 ETKDGv3 24
JR7 H9 -1.386 1.552 -0.362 ETKDGv3 25
JR7 H8 -3.476 2.958 -0.482 ETKDGv3 26
JR7 H7 -5.849 -0.569 0.258 ETKDGv3 27
JR7 H6 -3.881 -1.927 0.395 ETKDGv3 28
#