data_K2K
#
_chem_comp.id K2K
_chem_comp.name
(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[4-(6-azanyl-9~{H}-purin-8-yl)but-3-ynylamino]methyl]oxolane-3,4-diol
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H21 N11 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-04-16
_chem_comp.pdbx_modified_date 2020-02-14
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 451.442
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code K2K
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6RG8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K2K C2 C1 C 0 1 Y N N N N N 19.978 5.361 8.575 8.461 -0.497 0.825 C2 K2K 1
K2K C4 C2 C 0 1 Y N N N N N 17.857 6.195 8.209 6.270 -0.615 0.141 C4 K2K 2
K2K C5 C3 C 0 1 Y N N N N N 17.471 5.009 7.615 6.535 -1.859 -0.457 C5 K2K 3
K2K C6 C4 C 0 1 Y N N N N N 18.424 3.990 7.521 7.837 -2.379 -0.357 C6 K2K 4
K2K N9 N1 N 0 1 Y N N N N N 16.816 7.014 8.207 4.943 -0.357 -0.094 N9 K2K 5
K2K C8 C5 C 0 1 Y N N N N N 15.787 6.396 7.605 4.443 -1.407 -0.805 C8 K2K 6
K2K CAK C6 C 0 1 N N R N N N 16.986 8.382 8.762 4.201 0.829 0.339 CAK K2K 7
K2K CAL C7 C 0 1 N N R N N N 16.772 9.695 8.005 4.316 1.951 -0.717 CAL K2K 8
K2K CAM C8 C 0 1 N N S N N N 15.284 9.832 7.898 2.923 2.619 -0.709 CAM K2K 9
K2K CAN C9 C 0 1 N N R N N N 15.206 9.754 9.414 2.131 1.823 0.351 CAN K2K 10
K2K CAP C10 C 0 1 N N N N N N 13.862 9.927 10.165 0.675 1.655 -0.087 CAP K2K 11
K2K CAR C11 C 0 1 N N N N N N 13.467 10.506 12.565 -1.493 0.823 0.600 CAR K2K 12
K2K CAS C12 C 0 1 N N N N N N 14.343 10.391 13.815 -2.253 0.141 1.739 CAS K2K 13
K2K CAT C13 C 0 1 N N N N N N 15.658 10.966 13.461 -3.662 -0.038 1.352 CAT K2K 14
K2K CAU C14 C 0 1 N N N N N N 16.821 11.342 13.178 -4.785 -0.180 1.044 CAU K2K 15
K2K CAV C15 C 0 1 Y N N N N N 18.203 11.666 12.929 -6.156 -0.354 0.667 CAV K2K 16
K2K CAX C16 C 0 1 Y N N N N N 20.354 11.473 12.998 -8.295 -0.909 0.734 CAX K2K 17
K2K CAZ C17 C 0 1 Y N N N N N 22.602 11.874 12.676 -10.478 -1.151 0.055 CAZ K2K 18
K2K CBB C18 C 0 1 Y N N N N N 21.087 13.376 11.770 -9.031 -0.141 -1.432 CBB K2K 19
K2K CBC C19 C 0 1 Y N N N N N 20.039 12.616 12.285 -7.993 -0.296 -0.495 CBC K2K 20
K2K N1 N2 N 0 1 Y N N N N N 19.659 4.207 8.011 8.757 -1.664 0.283 N1 K2K 21
K2K N3 N3 N 0 1 Y N N N N N 19.104 6.348 8.681 7.254 0.024 0.766 N3 K2K 22
K2K N6 N4 N 0 1 N N N N N N 18.134 2.812 6.964 8.157 -3.599 -0.926 N6 K2K 23
K2K N7 N5 N 0 1 Y N N N N N 16.187 5.163 7.253 5.378 -2.287 -1.016 N7 K2K 24
K2K NAQ N6 N 0 1 N N N N N N 14.320 9.874 11.554 -0.087 1.001 0.986 NAQ K2K 25
K2K NAW N7 N 0 1 Y N N N N N 19.213 10.918 13.376 -7.124 -0.932 1.450 NAW K2K 26
K2K NAY N8 N 0 1 Y N N N N N 21.633 11.127 13.181 -9.540 -1.315 0.964 NAY K2K 27
K2K NBA N9 N 0 1 Y N N N N N 22.351 12.977 11.985 -10.243 -0.585 -1.114 NBA K2K 28
K2K NBD N10 N 0 1 Y N N N N N 18.705 12.713 12.263 -6.680 0.021 -0.477 NBD K2K 29
K2K NBE N11 N 0 1 N N N N N N 20.859 14.487 11.077 -8.794 0.451 -2.660 NBE K2K 30
K2K OAO O1 O 0 1 N N N N N N 15.710 8.367 9.514 2.788 0.538 0.415 OAO K2K 31
K2K OBF O2 O 0 1 N N N N N N 15.020 11.182 7.533 3.029 3.993 -0.327 OBF K2K 32
K2K OBG O3 O 0 1 N N N N N N 17.346 10.806 8.710 5.325 2.891 -0.342 OBG K2K 33
K2K H1 H1 H 0 1 N N N N N N 20.978 5.500 8.959 9.238 0.048 1.340 H1 K2K 34
K2K H2 H2 H 0 1 N N N N N N 14.807 6.817 7.434 3.421 -1.496 -1.142 H2 K2K 35
K2K H3 H3 H 0 1 N N N N N N 17.856 8.447 9.432 4.569 1.176 1.304 H3 K2K 36
K2K H4 H4 H 0 1 N N N N N N 17.209 9.609 6.999 4.534 1.530 -1.699 H4 K2K 37
K2K H5 H5 H 0 1 N N N N N N 14.758 9.038 7.347 2.450 2.529 -1.687 H5 K2K 38
K2K H6 H6 H 0 1 N N N N N N 15.943 10.446 9.847 2.182 2.323 1.318 H6 K2K 39
K2K H7 H7 H 0 1 N N N N N N 13.388 10.892 9.931 0.243 2.634 -0.295 H7 K2K 40
K2K H8 H8 H 0 1 N N N N N N 13.162 9.110 9.937 0.635 1.041 -0.987 H8 K2K 41
K2K H9 H9 H 0 1 N N N N N N 13.258 11.557 12.315 -1.548 0.204 -0.296 H9 K2K 42
K2K H10 H10 H 0 1 N N N N N N 12.518 9.963 12.687 -1.940 1.796 0.396 H10 K2K 43
K2K H11 H11 H 0 1 N N N N N N 13.894 10.954 14.647 -1.806 -0.832 1.942 H11 K2K 44
K2K H12 H12 H 0 1 N N N N N N 14.455 9.336 14.104 -2.197 0.760 2.635 H12 K2K 45
K2K H13 H13 H 0 1 N N N N N N 23.628 11.576 12.832 -11.479 -1.493 0.275 H13 K2K 46
K2K H14 H14 H 0 1 N N N N N N 18.939 2.220 6.996 7.479 -4.106 -1.400 H14 K2K 47
K2K H15 H15 H 0 1 N N N N N N 17.384 2.382 7.466 9.059 -3.947 -0.850 H15 K2K 48
K2K H16 H16 H 0 1 N N N N N N 14.417 8.910 11.802 0.332 0.120 1.242 H16 K2K 49
K2K H18 H18 H 0 1 N N N N N N 19.123 10.077 13.909 -7.003 -1.291 2.343 H18 K2K 50
K2K H20 H20 H 0 1 N N N N N N 21.730 14.891 10.798 -9.517 0.546 -3.301 H20 K2K 51
K2K H21 H21 H 0 1 N N N N N N 20.318 14.268 10.265 -7.905 0.771 -2.881 H21 K2K 52
K2K H22 H22 H 0 1 N N N N N N 14.082 11.312 7.454 3.568 4.527 -0.927 H22 K2K 53
K2K H23 H23 H 0 1 N N N N N N 18.288 10.695 8.764 5.440 3.617 -0.970 H23 K2K 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K2K N6 C6 SING N N 1
K2K N7 C8 DOUB Y N 2
K2K N7 C5 SING Y N 3
K2K C6 C5 DOUB Y N 4
K2K C6 N1 SING Y N 5
K2K OBF CAM SING N N 6
K2K C8 N9 SING Y N 7
K2K C5 C4 SING Y N 8
K2K CAM CAL SING N N 9
K2K CAM CAN SING N N 10
K2K CAL OBG SING N N 11
K2K CAL CAK SING N N 12
K2K N1 C2 DOUB Y N 13
K2K N9 C4 SING Y N 14
K2K N9 CAK SING N N 15
K2K C4 N3 DOUB Y N 16
K2K C2 N3 SING Y N 17
K2K CAK OAO SING N N 18
K2K CAN OAO SING N N 19
K2K CAN CAP SING N N 20
K2K CAP NAQ SING N N 21
K2K NBE CBB SING N N 22
K2K NAQ CAR SING N N 23
K2K CBB NBA DOUB Y N 24
K2K CBB CBC SING Y N 25
K2K NBA CAZ SING Y N 26
K2K NBD CBC SING Y N 27
K2K NBD CAV DOUB Y N 28
K2K CBC CAX DOUB Y N 29
K2K CAR CAS SING N N 30
K2K CAZ NAY DOUB Y N 31
K2K CAV CAU SING N N 32
K2K CAV NAW SING Y N 33
K2K CAX NAY SING Y N 34
K2K CAX NAW SING Y N 35
K2K CAU CAT TRIP N N 36
K2K CAT CAS SING N N 37
K2K C2 H1 SING N N 38
K2K C8 H2 SING N N 39
K2K CAK H3 SING N N 40
K2K CAL H4 SING N N 41
K2K CAM H5 SING N N 42
K2K CAN H6 SING N N 43
K2K CAP H7 SING N N 44
K2K CAP H8 SING N N 45
K2K CAR H9 SING N N 46
K2K CAR H10 SING N N 47
K2K CAS H11 SING N N 48
K2K CAS H12 SING N N 49
K2K CAZ H13 SING N N 50
K2K N6 H14 SING N N 51
K2K N6 H15 SING N N 52
K2K NAQ H16 SING N N 53
K2K NAW H18 SING N N 54
K2K NBE H20 SING N N 55
K2K NBE H21 SING N N 56
K2K OBF H22 SING N N 57
K2K OBG H23 SING N N 58
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K2K InChI InChI 1.03 InChI=1S/C19H21N11O3/c20-15-11-17(25-6-23-15)29-10(28-11)3-1-2-4-22-5-9-13(31)14(32)19(33-9)30-8-27-12-16(21)24-7-26-18(12)30/h6-9,13-14,19,22,31-32H,2,4-5H2,(H2,21,24,26)(H3,20,23,25,28,29)/t9-,13-,14-,19-/m1/s1
K2K InChIKey InChI 1.03 ZVZLLIKFDIWTQZ-NBKUUXFISA-N
K2K SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CNCCC#Cc4[nH]c5ncnc(N)c5n4)[C@@H](O)[C@H]3O"
K2K SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CNCCC#Cc4[nH]c5ncnc(N)c5n4)[CH](O)[CH]3O"
K2K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)[nH]c(n2)C#CCCNC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)N"
K2K SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)[nH]c(n2)C#CCCNCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)N"
#
_pdbx_chem_comp_identifier.comp_id K2K
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[4-(6-azanyl-9~{H}-purin-8-yl)but-3-ynylamino]methyl]oxolane-3,4-diol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K2K 'Create component' 2019-04-16 RCSB
K2K 'Initial release' 2020-02-19 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
K2K C2 C 23.937 -0.531 1
K2K C4 C 21.832 -2.054 2
K2K C5 C 22.712 -3.269 3
K2K C6 C 24.204 -3.115 4
K2K N9 N 20.415 -2.516 5
K2K C8 C 20.413 -4.007 6
K2K CAK C 19.201 -1.634 7
K2K CAL C 19.201 -0.134 8
K2K CAM C 17.775 0.329 9
K2K CAN C 16.893 -0.884 10
K2K CAP C 15.393 -0.884 11
K2K CAR C 13.143 0.415 12
K2K CAS C 12.393 1.714 13
K2K CAT C 10.893 1.714 14
K2K CAU C 9.393 1.714 15
K2K CAV C 7.893 1.714 16
K2K CAX C 5.598 0.964 17
K2K CAZ C 3.000 0.964 18
K2K CBB C 4.299 3.214 19
K2K CBC C 5.598 2.464 20
K2K N1 N 24.816 -1.746 21
K2K N3 N 22.445 -0.685 22
K2K N6 N 25.084 -4.330 23
K2K N7 N 21.830 -4.471 24
K2K NAQ N 14.643 0.415 25
K2K NAW N 7.018 0.507 26
K2K NAY N 4.299 0.214 27
K2K NBA N 3.000 2.464 28
K2K NBD N 7.018 2.921 29
K2K NBE N 4.299 4.714 30
K2K OAO O 17.775 -2.098 31
K2K OBF O 17.311 1.756 32
K2K OBG O 20.415 0.748 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
K2K N6 C6 SINGLE NONE 1
K2K N7 C8 DOUBLE NONE 2
K2K N7 C5 SINGLE NONE 3
K2K C6 C5 DOUBLE NONE 4
K2K C6 N1 SINGLE NONE 5
K2K CAM OBF SINGLE BEGINWEDGE 6
K2K C8 N9 SINGLE NONE 7
K2K C5 C4 SINGLE NONE 8
K2K CAM CAL SINGLE NONE 9
K2K CAM CAN SINGLE NONE 10
K2K CAL OBG SINGLE BEGINWEDGE 11
K2K CAL CAK SINGLE NONE 12
K2K N1 C2 DOUBLE NONE 13
K2K N9 C4 SINGLE NONE 14
K2K CAK N9 SINGLE BEGINDASH 15
K2K C4 N3 DOUBLE NONE 16
K2K C2 N3 SINGLE NONE 17
K2K CAK OAO SINGLE NONE 18
K2K CAN OAO SINGLE NONE 19
K2K CAN CAP SINGLE BEGINDASH 20
K2K CAP NAQ SINGLE NONE 21
K2K NBE CBB SINGLE NONE 22
K2K NAQ CAR SINGLE NONE 23
K2K CBB NBA SINGLE NONE 24
K2K CBB CBC DOUBLE NONE 25
K2K NBA CAZ DOUBLE NONE 26
K2K NBD CBC SINGLE NONE 27
K2K NBD CAV DOUBLE NONE 28
K2K CBC CAX SINGLE NONE 29
K2K CAR CAS SINGLE NONE 30
K2K CAZ NAY SINGLE NONE 31
K2K CAV CAU SINGLE NONE 32
K2K CAV NAW SINGLE NONE 33
K2K CAX NAY DOUBLE NONE 34
K2K CAX NAW SINGLE NONE 35
K2K CAU CAT TRIPLE NONE 36
K2K CAT CAS SINGLE NONE 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
K2K MurckoScaffold S1 scaffold 'C(#Cc1nc2cncnc2[nH]1)CCNC[C@@H]1CC[C@H](n2cnc3cncnc32)O1' InChI=1S/C19H19N9O/c1(3-16-26-14-8-21-10-23-18(14)27-16)2-6-20-7-13-4-5-17(29-13)28-12-25-15-9-22-11-24-19(15)28/h8-13,17,20H,2,4-7H2,(H,21,23,26,27)/t13-,17+/m0/s1 NEMPTXFTJCMSKJ-SUMWQHHRSA-N
K2K adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
K2K imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
K2K purine F3 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
K2K pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
K2K C2 S1 1
K2K C4 S1 1
K2K C5 S1 1
K2K C6 S1 1
K2K N9 S1 1
K2K C8 S1 1
K2K CAK S1 1
K2K CAL S1 1
K2K CAM S1 1
K2K CAN S1 1
K2K CAP S1 1
K2K CAR S1 1
K2K CAS S1 1
K2K CAT S1 1
K2K CAU S1 1
K2K CAV S1 1
K2K CAX S1 1
K2K CAZ S1 1
K2K CBB S1 1
K2K CBC S1 1
K2K N1 S1 1
K2K N3 S1 1
K2K N7 S1 1
K2K NAQ S1 1
K2K NAW S1 1
K2K NAY S1 1
K2K NBA S1 1
K2K NBD S1 1
K2K OAO S1 1
K2K N1 F1 1
K2K C6 F1 1
K2K C5 F1 1
K2K C4 F1 1
K2K N3 F1 1
K2K C2 F1 1
K2K N9 F1 1
K2K C8 F1 1
K2K N7 F1 1
K2K N6 F1 1
K2K NBA F1 2
K2K CBB F1 2
K2K CBC F1 2
K2K CAX F1 2
K2K NAY F1 2
K2K CAZ F1 2
K2K NAW F1 2
K2K CAV F1 2
K2K NBD F1 2
K2K NBE F1 2
K2K C4 F2 1
K2K C5 F2 1
K2K N7 F2 1
K2K C8 F2 1
K2K N9 F2 1
K2K CAX F2 2
K2K CBC F2 2
K2K NBD F2 2
K2K CAV F2 2
K2K NAW F2 2
K2K N7 F3 1
K2K C8 F3 1
K2K N9 F3 1
K2K C4 F3 1
K2K C5 F3 1
K2K C6 F3 1
K2K N1 F3 1
K2K C2 F3 1
K2K N3 F3 1
K2K NBD F3 2
K2K CAV F3 2
K2K NAW F3 2
K2K CAX F3 2
K2K CBC F3 2
K2K CBB F3 2
K2K NBA F3 2
K2K CAZ F3 2
K2K NAY F3 2
K2K C5 F4 1
K2K C6 F4 1
K2K N1 F4 1
K2K C2 F4 1
K2K N3 F4 1
K2K C4 F4 1
K2K CBC F4 2
K2K CBB F4 2
K2K NBA F4 2
K2K CAZ F4 2
K2K NAY F4 2
K2K CAX F4 2
#
_pdbe_chem_comp_rdkit_properties.comp_id K2K
_pdbe_chem_comp_rdkit_properties.exactmw 451.183
_pdbe_chem_comp_rdkit_properties.amw 451.451
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 8
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 13
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.368
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 216.034
_pdbe_chem_comp_rdkit_properties.tpsa 211.820
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.365
_pdbe_chem_comp_rdkit_properties.CrippenMR 109.794
_pdbe_chem_comp_rdkit_properties.chi0v 15.644
_pdbe_chem_comp_rdkit_properties.chi1v 8.512
_pdbe_chem_comp_rdkit_properties.chi2v 3.889
_pdbe_chem_comp_rdkit_properties.chi3v 3.889
_pdbe_chem_comp_rdkit_properties.chi4v 2.493
_pdbe_chem_comp_rdkit_properties.chi0n 36.644
_pdbe_chem_comp_rdkit_properties.chi1n 18.512
_pdbe_chem_comp_rdkit_properties.chi2n 3.889
_pdbe_chem_comp_rdkit_properties.chi3n 3.889
_pdbe_chem_comp_rdkit_properties.chi4n 2.493
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.900
_pdbe_chem_comp_rdkit_properties.kappa1 7.851
_pdbe_chem_comp_rdkit_properties.kappa2 8.560
_pdbe_chem_comp_rdkit_properties.kappa3 3.895
_pdbe_chem_comp_rdkit_properties.Phi 2.036
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
K2K UniChem PDBe K2K
K2K UniChem PubChem 145925586
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
K2K C2 -8.213 -0.144 0.031 ETKDGv3 1
K2K C4 -5.958 0.463 0.283 ETKDGv3 2
K2K C5 -6.351 1.599 1.033 ETKDGv3 3
K2K C6 -7.640 1.833 1.275 ETKDGv3 4
K2K N9 -4.546 0.374 0.314 ETKDGv3 5
K2K C8 -4.188 1.496 1.151 ETKDGv3 6
K2K CAK -3.743 -0.827 0.061 ETKDGv3 7
K2K CAL -3.802 -1.218 -1.413 ETKDGv3 8
K2K CAM -2.605 -0.502 -1.991 ETKDGv3 9
K2K CAN -1.659 -0.385 -0.789 ETKDGv3 10
K2K CAP -0.946 0.983 -0.718 ETKDGv3 11
K2K CAR 1.448 1.169 -1.264 ETKDGv3 12
K2K CAS 1.907 -0.220 -0.799 ETKDGv3 13
K2K CAT 3.318 -0.184 -0.400 ETKDGv3 14
K2K CAU 4.478 -0.153 -0.073 ETKDGv3 15
K2K CAV 5.859 -0.114 0.317 ETKDGv3 16
K2K CAX 7.901 0.651 0.722 ETKDGv3 17
K2K CAZ 10.154 0.644 1.375 ETKDGv3 18
K2K CBB 8.867 -1.388 1.493 ETKDGv3 19
K2K CBC 7.808 -0.728 1.028 ETKDGv3 20
K2K N1 -8.600 0.910 0.712 ETKDGv3 21
K2K N3 -6.805 -0.409 -0.172 ETKDGv3 22
K2K N6 -8.069 2.927 2.086 ETKDGv3 23
K2K N7 -5.193 2.221 1.570 ETKDGv3 24
K2K NAQ 0.070 1.155 -1.776 ETKDGv3 25
K2K NAW 6.647 1.092 0.254 ETKDGv3 26
K2K NAY 8.989 1.341 0.871 ETKDGv3 27
K2K NBA 10.091 -0.636 1.666 ETKDGv3 28
K2K NBD 6.487 -1.175 0.754 ETKDGv3 29
K2K NBE 8.812 -2.778 1.813 ETKDGv3 30
K2K OAO -2.395 -0.584 0.403 ETKDGv3 31
K2K OBF -2.024 -1.246 -3.035 ETKDGv3 32
K2K OBG -3.715 -2.616 -1.570 ETKDGv3 33
K2K H1 -8.950 -0.824 -0.372 ETKDGv3 34
K2K H2 -3.168 1.720 1.433 ETKDGv3 35
K2K H3 -4.131 -1.652 0.698 ETKDGv3 36
K2K H4 -4.736 -0.868 -1.904 ETKDGv3 37
K2K H5 -2.936 0.506 -2.343 ETKDGv3 38
K2K H6 -0.892 -1.189 -0.841 ETKDGv3 39
K2K H7 -1.697 1.796 -0.816 ETKDGv3 40
K2K H8 -0.505 1.103 0.298 ETKDGv3 41
K2K H9 1.544 1.907 -0.436 ETKDGv3 42
K2K H10 2.117 1.515 -2.083 ETKDGv3 43
K2K H11 1.308 -0.553 0.073 ETKDGv3 44
K2K H12 1.788 -0.956 -1.621 ETKDGv3 45
K2K H13 11.082 1.181 1.514 ETKDGv3 46
K2K H14 -9.087 3.072 2.268 ETKDGv3 47
K2K H15 -7.383 3.594 2.504 ETKDGv3 48
K2K H16 -0.013 0.431 -2.526 ETKDGv3 49
K2K H18 6.363 2.047 -0.059 ETKDGv3 50
K2K H20 9.662 -3.263 2.176 ETKDGv3 51
K2K H21 7.932 -3.327 1.691 ETKDGv3 52
K2K H22 -1.792 -0.606 -3.757 ETKDGv3 53
K2K H23 -2.894 -2.932 -1.109 ETKDGv3 54
#