data_K4D
#
_chem_comp.id K4D
_chem_comp.name Flecainide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H20 F6 N2 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms N-{[(2R)-piperidin-2-yl]methyl}-2,5-bis(2,2,2-trifluoroethoxy)benzamide
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-10-29
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 414.343
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code K4D
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6MVX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K4D C10 C1 C 0 1 N N N N N N -3.380 -43.862 -24.881 1.580 0.023 -0.192 C10 K4D 1
K4D N12 N1 N 0 1 N N N N N N -2.779 -44.287 -26.125 1.795 -1.305 -0.276 N12 K4D 2
K4D C13 C2 C 0 1 N N N N N N -1.420 -43.753 -26.440 3.164 -1.821 -0.359 C13 K4D 3
K4D C15 C3 C 0 1 N N N N N N -0.827 -46.099 -25.911 4.558 -3.894 -0.407 C15 K4D 4
K4D C17 C4 C 0 1 N N N N N N -0.307 -46.615 -28.212 3.680 -5.954 0.696 C17 K4D 5
K4D C20 C5 C 0 1 Y N N N N N -5.574 -43.459 -23.640 -0.026 1.922 -0.015 C20 K4D 6
K4D C22 C6 C 0 1 N N N N N N -5.151 -41.132 -24.144 0.713 4.177 0.106 C22 K4D 7
K4D C28 C7 C 0 1 Y N N N N N -7.370 -45.082 -23.606 -2.391 1.525 0.046 C28 K4D 8
K4D C02 C8 C 0 1 N N N N N N -8.806 -48.942 -24.404 -5.585 -1.231 -0.020 C02 K4D 9
K4D C05 C9 C 0 1 N N N N N N -8.294 -47.542 -24.015 -4.533 -0.121 0.015 C05 K4D 10
K4D C07 C10 C 0 1 Y N N N N N -6.599 -45.952 -24.412 -2.172 0.157 -0.052 C07 K4D 11
K4D C08 C11 C 0 1 Y N N N N N -5.300 -45.554 -24.829 -0.883 -0.338 -0.119 C08 K4D 12
K4D C09 C12 C 0 1 Y N N N N N -4.788 -44.318 -24.441 0.201 0.543 -0.107 C09 K4D 13
K4D C14 C13 C 0 1 N N R N N N -0.320 -44.667 -26.115 3.129 -3.348 -0.445 C14 K4D 14
K4D C16 C14 C 0 1 N N N N N N -0.166 -47.034 -26.801 4.517 -5.424 -0.471 C16 K4D 15
K4D C18 C15 C 0 1 N N N N N N 0.210 -45.198 -28.442 2.275 -5.348 0.625 C18 K4D 16
K4D C23 C16 C 0 1 N N N N N N -4.198 -40.056 -23.672 2.011 4.987 0.111 C23 K4D 17
K4D C27 C17 C 0 1 Y N N N N N -6.863 -43.860 -23.229 -1.324 2.402 0.064 C27 K4D 18
K4D F01 F1 F 0 1 N N N N N N -9.871 -49.236 -23.664 -5.469 -1.947 -1.216 F01 K4D 19
K4D F03 F2 F 0 1 N N N N N N -7.860 -49.841 -24.182 -5.387 -2.096 1.062 F03 K4D 20
K4D F04 F3 F 0 1 N N N N N N -9.130 -48.962 -25.713 -6.862 -0.665 0.064 F04 K4D 21
K4D F24 F4 F 0 1 N N N N N N -3.010 -40.215 -24.262 2.797 4.602 1.203 F24 K4D 22
K4D F25 F5 F 0 1 N N N N N N -4.061 -40.158 -22.353 2.714 4.751 -1.075 F25 K4D 23
K4D F26 F6 F 0 1 N N N N N N -4.669 -38.869 -23.966 1.710 6.350 0.211 F26 K4D 24
K4D N19 N2 N 0 1 N N N N N N 0.653 -44.557 -27.217 2.368 -3.884 0.692 N19 K4D 25
K4D O06 O1 O 0 1 N N N N N N -7.149 -47.204 -24.783 -3.229 -0.699 -0.070 O06 K4D 26
K4D O11 O2 O 0 1 N N N N N N -2.732 -43.110 -24.172 2.521 0.792 -0.181 O11 K4D 27
K4D O21 O3 O 0 1 N N N N N N -5.089 -42.173 -23.209 1.021 2.785 0.004 O21 K4D 28
K4D H1 H1 H 0 1 N N N N N N -3.252 -44.911 -26.747 1.044 -1.919 -0.280 H1 K4D 29
K4D H2 H2 H 0 1 N N N N N N -1.378 -43.533 -27.517 3.650 -1.419 -1.248 H2 K4D 30
K4D H3 H3 H 0 1 N N N N N N -1.275 -42.823 -25.870 3.721 -1.519 0.527 H3 K4D 31
K4D H4 H4 H 0 1 N N N N N N -1.909 -46.125 -26.106 5.117 -3.509 -1.259 H4 K4D 32
K4D H5 H5 H 0 1 N N N N N N -0.635 -46.400 -24.871 5.042 -3.582 0.518 H5 K4D 33
K4D H6 H6 H 0 1 N N N N N N -1.371 -46.654 -28.490 3.612 -7.040 0.631 H6 K4D 34
K4D H7 H7 H 0 1 N N N N N N 0.264 -47.309 -28.847 4.150 -5.674 1.638 H7 K4D 35
K4D H8 H8 H 0 1 N N N N N N -6.175 -40.733 -24.198 0.166 4.361 1.030 H8 K4D 36
K4D H9 H9 H 0 1 N N N N N N -4.847 -41.497 -25.136 0.101 4.477 -0.745 H9 K4D 37
K4D H10 H10 H 0 1 N N N N N N -8.358 -45.378 -23.286 -3.400 1.905 0.107 H10 K4D 38
K4D H11 H11 H 0 1 N N N N N N -8.029 -47.536 -22.947 -4.687 0.553 -0.828 H11 K4D 39
K4D H12 H12 H 0 1 N N N N N N -9.086 -46.802 -24.200 -4.623 0.437 0.947 H12 K4D 40
K4D H13 H13 H 0 1 N N N N N N -4.708 -46.212 -25.448 -0.715 -1.402 -0.191 H13 K4D 41
K4D H14 H14 H 0 1 N N N N N N 0.158 -44.336 -25.182 2.649 -3.649 -1.376 H14 K4D 42
K4D H15 H15 H 0 1 N N N N N N -0.616 -48.030 -26.675 4.069 -5.737 -1.414 H15 K4D 43
K4D H16 H16 H 0 1 N N N N N N 0.903 -47.080 -26.545 5.531 -5.818 -0.400 H16 K4D 44
K4D H17 H17 H 0 1 N N N N N N 1.057 -45.242 -29.142 1.800 -5.640 -0.312 H17 K4D 45
K4D H18 H18 H 0 1 N N N N N N -0.598 -44.596 -28.882 1.680 -5.713 1.462 H18 K4D 46
K4D H19 H19 H 0 1 N N N N N N -7.457 -43.201 -22.613 -1.502 3.465 0.140 H19 K4D 47
K4D H20 H20 H 0 1 N N N N N N 1.510 -44.984 -26.928 1.452 -3.466 0.743 H20 K4D 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K4D C18 C17 SING N N 1
K4D C18 N19 SING N N 2
K4D C17 C16 SING N N 3
K4D N19 C14 SING N N 4
K4D C16 C15 SING N N 5
K4D C13 N12 SING N N 6
K4D C13 C14 SING N N 7
K4D N12 C10 SING N N 8
K4D C14 C15 SING N N 9
K4D F04 C02 SING N N 10
K4D C10 C09 SING N N 11
K4D C10 O11 DOUB N N 12
K4D C08 C09 DOUB Y N 13
K4D C08 C07 SING Y N 14
K4D O06 C07 SING N N 15
K4D O06 C05 SING N N 16
K4D C09 C20 SING Y N 17
K4D C07 C28 DOUB Y N 18
K4D C02 F03 SING N N 19
K4D C02 C05 SING N N 20
K4D C02 F01 SING N N 21
K4D F24 C23 SING N N 22
K4D C22 C23 SING N N 23
K4D C22 O21 SING N N 24
K4D F26 C23 SING N N 25
K4D C23 F25 SING N N 26
K4D C20 C27 DOUB Y N 27
K4D C20 O21 SING N N 28
K4D C28 C27 SING Y N 29
K4D N12 H1 SING N N 30
K4D C13 H2 SING N N 31
K4D C13 H3 SING N N 32
K4D C15 H4 SING N N 33
K4D C15 H5 SING N N 34
K4D C17 H6 SING N N 35
K4D C17 H7 SING N N 36
K4D C22 H8 SING N N 37
K4D C22 H9 SING N N 38
K4D C28 H10 SING N N 39
K4D C05 H11 SING N N 40
K4D C05 H12 SING N N 41
K4D C08 H13 SING N N 42
K4D C14 H14 SING N N 43
K4D C16 H15 SING N N 44
K4D C16 H16 SING N N 45
K4D C18 H17 SING N N 46
K4D C18 H18 SING N N 47
K4D C27 H19 SING N N 48
K4D N19 H20 SING N N 49
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K4D SMILES ACDLabs 12.01 C(c1c(ccc(c1)OCC(F)(F)F)OCC(F)(F)F)(=O)NCC2CCCCN2
K4D InChI InChI 1.03 InChI=1S/C17H20F6N2O3/c18-16(19,20)9-27-12-4-5-14(28-10-17(21,22)23)13(7-12)15(26)25-8-11-3-1-2-6-24-11/h4-5,7,11,24H,1-3,6,8-10H2,(H,25,26)/t11-/m1/s1
K4D InChIKey InChI 1.03 DJBNUMBKLMJRSA-LLVKDONJSA-N
K4D SMILES_CANONICAL CACTVS 3.385 FC(F)(F)COc1ccc(OCC(F)(F)F)c(c1)C(=O)NC[C@H]2CCCCN2
K4D SMILES CACTVS 3.385 FC(F)(F)COc1ccc(OCC(F)(F)F)c(c1)C(=O)NC[CH]2CCCCN2
K4D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cc(c(cc1OCC(F)(F)F)C(=O)NC[C@H]2CCCCN2)OCC(F)(F)F
K4D SMILES "OpenEye OEToolkits" 2.0.6 c1cc(c(cc1OCC(F)(F)F)C(=O)NCC2CCCCN2)OCC(F)(F)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
K4D "SYSTEMATIC NAME" ACDLabs 12.01 N-{[(2R)-piperidin-2-yl]methyl}-2,5-bis(2,2,2-trifluoroethoxy)benzamide
K4D "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[[(2~{R})-piperidin-2-yl]methyl]-2,5-bis[2,2,2-tris(fluoranyl)ethoxy]benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K4D 'Create component' 2018-10-29 RCSB
K4D 'Modify name' 2018-10-29 RCSB
K4D 'Initial release' 2018-12-05 RCSB
K4D 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id K4D
_pdbx_chem_comp_synonyms.name N-{[(2R)-piperidin-2-yl]methyl}-2,5-bis(2,2,2-trifluoroethoxy)benzamide
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id K4D
_pdbe_chem_comp_synonyms.name 'N-{[(2R)-piperidin-2-yl]methyl}-2,5-bis(2,2,2-trifluoroethoxy)benzamide'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
K4D C10 C 9.495 1.399 1
K4D N12 N 10.794 2.150 2
K4D C13 C 10.794 3.650 3
K4D C15 C 13.392 3.650 4
K4D C17 C 14.691 5.899 5
K4D C20 C 8.196 -0.851 6
K4D C22 C 5.598 -0.851 7
K4D C28 C 9.495 -3.100 8
K4D C02 C 13.392 -5.351 9
K4D C05 C 12.093 -4.601 10
K4D C07 C 10.794 -2.350 11
K4D C08 C 10.794 -0.851 12
K4D C09 C 9.495 -0.101 13
K4D C14 C 12.093 4.399 14
K4D C16 C 14.691 4.399 15
K4D C18 C 13.392 6.649 16
K4D C23 C 4.299 -0.101 17
K4D C27 C 8.196 -2.350 18
K4D F01 F 14.142 -4.051 19
K4D F03 F 12.642 -6.649 20
K4D F04 F 14.691 -6.101 21
K4D F24 F 3.000 0.649 22
K4D F25 F 5.049 1.198 23
K4D F26 F 3.549 -1.399 24
K4D N19 N 12.093 5.899 25
K4D O06 O 12.093 -3.100 26
K4D O11 O 8.196 2.150 27
K4D O21 O 6.897 -0.101 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
K4D C18 C17 SINGLE NONE 1
K4D C18 N19 SINGLE NONE 2
K4D C17 C16 SINGLE NONE 3
K4D N19 C14 SINGLE NONE 4
K4D C16 C15 SINGLE NONE 5
K4D C13 N12 SINGLE NONE 6
K4D C14 C13 SINGLE BEGINDASH 7
K4D N12 C10 SINGLE NONE 8
K4D C14 C15 SINGLE NONE 9
K4D F04 C02 SINGLE NONE 10
K4D C10 C09 SINGLE NONE 11
K4D C10 O11 DOUBLE NONE 12
K4D C08 C09 SINGLE NONE 13
K4D C08 C07 DOUBLE NONE 14
K4D O06 C07 SINGLE NONE 15
K4D O06 C05 SINGLE NONE 16
K4D C09 C20 DOUBLE NONE 17
K4D C07 C28 SINGLE NONE 18
K4D C02 F03 SINGLE NONE 19
K4D C02 C05 SINGLE NONE 20
K4D C02 F01 SINGLE NONE 21
K4D F24 C23 SINGLE NONE 22
K4D C22 C23 SINGLE NONE 23
K4D C22 O21 SINGLE NONE 24
K4D F26 C23 SINGLE NONE 25
K4D C23 F25 SINGLE NONE 26
K4D C20 C27 SINGLE NONE 27
K4D C20 O21 SINGLE NONE 28
K4D C28 C27 DOUBLE NONE 29
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
K4D MurckoScaffold S1 scaffold 'O=C(NC[C@H]1CCCCN1)c1ccccc1' InChI=1S/C13H18N2O/c16-13(11-6-2-1-3-7-11)15-10-12-8-4-5-9-14-12/h1-3,6-7,12,14H,4-5,8-10H2,(H,15,16)/t12-/m1/s1 CQDZPECTECONTE-GFCCVEGCSA-N
K4D amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
K4D phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
K4D C10 S1 1
K4D N12 S1 1
K4D C13 S1 1
K4D C15 S1 1
K4D C17 S1 1
K4D C20 S1 1
K4D C28 S1 1
K4D C07 S1 1
K4D C08 S1 1
K4D C09 S1 1
K4D C14 S1 1
K4D C16 S1 1
K4D C18 S1 1
K4D C27 S1 1
K4D N19 S1 1
K4D O11 S1 1
K4D N12 F1 1
K4D C10 F1 1
K4D O11 F1 1
K4D C09 F1 1
K4D C20 F2 1
K4D C09 F2 1
K4D C08 F2 1
K4D C07 F2 1
K4D C28 F2 1
K4D C27 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id K4D
_pdbe_chem_comp_rdkit_properties.exactmw 414.138
_pdbe_chem_comp_rdkit_properties.amw 414.346
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.588
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 185.137
_pdbe_chem_comp_rdkit_properties.tpsa 59.590
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.461
_pdbe_chem_comp_rdkit_properties.CrippenMR 86.031
_pdbe_chem_comp_rdkit_properties.chi0v 12.887
_pdbe_chem_comp_rdkit_properties.chi1v 6.549
_pdbe_chem_comp_rdkit_properties.chi2v 2.237
_pdbe_chem_comp_rdkit_properties.chi3v 2.237
_pdbe_chem_comp_rdkit_properties.chi4v 1.316
_pdbe_chem_comp_rdkit_properties.chi0n 32.887
_pdbe_chem_comp_rdkit_properties.chi1n 16.443
_pdbe_chem_comp_rdkit_properties.chi2n 2.237
_pdbe_chem_comp_rdkit_properties.chi3n 2.237
_pdbe_chem_comp_rdkit_properties.chi4n 1.316
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.170
_pdbe_chem_comp_rdkit_properties.kappa1 7.262
_pdbe_chem_comp_rdkit_properties.kappa2 9.352
_pdbe_chem_comp_rdkit_properties.kappa3 7.829
_pdbe_chem_comp_rdkit_properties.Phi 2.425
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
K4D UniChem ChEMBL CHEMBL398673
K4D UniChem PDBe K4D
K4D UniChem ZINC ZINC000000896543
K4D UniChem eMolecules 11020017
K4D UniChem 'Probes And Drugs' PD071046
K4D UniChem 'EPA CompTox Dashboard' DTXSID80424962
K4D UniChem SureChEMBL SCHEMBL14971
K4D UniChem PubChem 6603850
K4D UniChem Nikkaji J401.529K
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
K4D C10 -0.059 -0.025 -1.224 ETKDGv3 1
K4D N12 0.773 -1.137 -0.853 ETKDGv3 2
K4D C13 2.099 -1.366 -1.433 ETKDGv3 3
K4D C15 3.088 0.597 -0.113 ETKDGv3 4
K4D C17 5.018 -0.040 1.445 ETKDGv3 5
K4D C20 -2.256 -0.939 -0.540 ETKDGv3 6
K4D C22 -2.619 -3.394 -0.857 ETKDGv3 7
K4D C28 -4.016 0.495 0.392 ETKDGv3 8
K4D C02 -3.726 5.295 1.012 ETKDGv3 9
K4D C05 -2.876 4.139 0.502 ETKDGv3 10
K4D C07 -3.127 1.659 0.220 ETKDGv3 11
K4D C08 -1.895 1.476 -0.292 ETKDGv3 12
K4D C09 -1.426 0.119 -0.675 ETKDGv3 13
K4D C14 3.234 -0.890 -0.499 ETKDGv3 14
K4D C16 4.320 1.088 0.666 ETKDGv3 15
K4D C18 4.019 -1.128 1.854 ETKDGv3 16
K4D C23 -1.828 -4.577 -1.399 ETKDGv3 17
K4D C27 -3.612 -0.729 0.037 ETKDGv3 18
K4D F01 -4.065 5.080 2.336 ETKDGv3 19
K4D F03 -3.013 6.475 0.913 ETKDGv3 20
K4D F04 -4.880 5.399 0.257 ETKDGv3 21
K4D F24 -2.582 -5.730 -1.286 ETKDGv3 22
K4D F25 -1.520 -4.366 -2.731 ETKDGv3 23
K4D F26 -0.656 -4.728 -0.679 ETKDGv3 24
K4D N19 3.369 -1.766 0.690 ETKDGv3 25
K4D O06 -3.610 2.920 0.603 ETKDGv3 26
K4D O11 0.388 0.867 -1.996 ETKDGv3 27
K4D O21 -1.839 -2.208 -0.970 ETKDGv3 28
K4D H1 0.458 -1.768 -0.083 ETKDGv3 29
K4D H2 2.222 -2.453 -1.630 ETKDGv3 30
K4D H3 2.186 -0.853 -2.415 ETKDGv3 31
K4D H4 2.183 0.725 0.521 ETKDGv3 32
K4D H5 2.961 1.220 -1.025 ETKDGv3 33
K4D H6 5.509 0.378 2.351 ETKDGv3 34
K4D H7 5.810 -0.498 0.812 ETKDGv3 35
K4D H8 -3.558 -3.282 -1.441 ETKDGv3 36
K4D H9 -2.867 -3.580 0.210 ETKDGv3 37
K4D H10 -5.006 0.634 0.808 ETKDGv3 38
K4D H11 -2.605 4.327 -0.559 ETKDGv3 39
K4D H12 -1.949 4.071 1.113 ETKDGv3 40
K4D H13 -1.222 2.312 -0.421 ETKDGv3 41
K4D H14 4.173 -0.987 -1.090 ETKDGv3 42
K4D H15 5.051 1.539 -0.039 ETKDGv3 43
K4D H16 4.003 1.886 1.373 ETKDGv3 44
K4D H17 3.250 -0.680 2.524 ETKDGv3 45
K4D H18 4.554 -1.910 2.435 ETKDGv3 46
K4D H19 -4.290 -1.560 0.171 ETKDGv3 47
K4D H20 2.432 -2.106 1.006 ETKDGv3 48
#