data_K9L
#
_chem_comp.id K9L
_chem_comp.name (1S,2S)-2-(3-fluorobenzyl)-N-{2-[2-(1H-imidazol-1-yl)pyrimidin-4-yl]ethyl}cyclopropanamine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H20 F N5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-10-21
_chem_comp.pdbx_modified_date 2014-12-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 337.394
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code K9L
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4D2Z
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K9L N01 N01 N 0 1 Y N N N N N 10.387 2.041 59.265 6.351 -2.630 -0.339 N01 K9L 1
K9L C02 C02 C 0 1 Y N N N N N 11.621 2.085 58.741 5.365 -1.849 0.006 C02 K9L 2
K9L N03 N03 N 0 1 Y N N N N N 12.344 1.478 59.693 5.696 -0.568 -0.310 N03 K9L 3
K9L C04 C04 C 0 1 Y N N N N N 11.676 1.083 60.780 6.948 -0.604 -0.872 C04 K9L 4
K9L C05 C05 C 0 1 Y N N N N N 10.374 1.456 60.487 7.334 -1.893 -0.879 C05 K9L 5
K9L "C1'" "C1'" C 0 1 Y N N N N N 20.214 7.490 54.495 -5.173 -0.697 -0.497 "C1'" K9L 6
K9L N11 N11 N 0 1 Y N N N N N 14.297 2.054 58.609 3.719 0.434 0.455 N11 K9L 7
K9L C12 C12 C 0 1 Y N N N N N 13.670 1.347 59.581 4.912 0.567 -0.102 C12 K9L 8
K9L N13 N13 N 0 1 Y N N N N N 14.367 0.567 60.445 5.379 1.750 -0.467 N13 K9L 9
K9L C14 C14 C 0 1 Y N N N N N 15.700 0.462 60.338 4.662 2.846 -0.285 C14 K9L 10
K9L C15 C15 C 0 1 Y N N N N N 16.373 1.166 59.342 3.408 2.744 0.296 C15 K9L 11
K9L C16 C16 C 0 1 Y N N N N N 15.635 1.967 58.467 2.950 1.489 0.666 C16 K9L 12
K9L C17 C17 C 0 1 N N N N N N 16.318 2.765 57.382 1.592 1.329 1.301 C17 K9L 13
K9L C18 C18 C 0 1 N N N N N N 15.767 4.185 57.355 0.770 0.319 0.497 C18 K9L 14
K9L N19 N19 N 0 1 N N N N N N 16.302 4.902 56.176 -0.553 0.163 1.116 N19 K9L 15
K9L "C2'" "C2'" C 0 1 Y N N N N N 19.479 8.624 54.150 -5.677 0.557 -0.781 "C2'" K9L 16
K9L C21 C21 C 0 1 N N S N N N 17.744 5.177 56.350 -1.373 -0.801 0.370 C21 K9L 17
K9L C22 C22 C 0 1 N N N N N N 18.525 4.354 55.330 -2.173 -1.824 1.179 C22 K9L 18
K9L C23 C23 C 0 1 N N S N N N 18.344 5.850 55.113 -2.893 -0.669 0.478 C23 K9L 19
K9L C24 C24 C 0 1 N N N N N N 19.678 6.479 55.488 -3.722 -1.004 -0.764 C24 K9L 20
K9L "C3'" "C3'" C 0 1 Y N N N N N 20.013 9.549 53.251 -7.011 0.839 -0.536 "C3'" K9L 21
K9L "C4'" "C4'" C 0 1 Y N N N N N 21.277 9.345 52.703 -7.837 -0.138 -0.006 "C4'" K9L 22
K9L "C5'" "C5'" C 0 1 Y N N N N N 22.017 8.220 53.055 -7.330 -1.392 0.278 "C5'" K9L 23
K9L "C6'" "C6'" C 0 1 Y N N N N N 21.486 7.301 53.954 -5.998 -1.670 0.038 "C6'" K9L 24
K9L "F7'" "F7'" F 0 1 N N N N N N 19.309 10.639 52.897 -7.505 2.065 -0.814 "F7'" K9L 25
K9L H02 H02 H 0 1 N N N N N N 11.947 2.501 57.799 4.440 -2.166 0.465 H02 K9L 26
K9L H04 H04 H 0 1 N N N N N N 12.056 0.595 61.666 7.514 0.240 -1.237 H04 K9L 27
K9L H05 H05 H 0 1 N N N N N N 9.509 1.308 61.116 8.274 -2.270 -1.255 H05 K9L 28
K9L H14 H14 H 0 1 N N N N N N 16.250 -0.167 61.022 5.049 3.809 -0.585 H14 K9L 29
K9L H15 H15 H 0 1 N N N N N N 17.446 1.094 59.248 2.801 3.623 0.457 H15 K9L 30
K9L H17 H17 H 0 1 N N N N N N 17.400 2.798 57.580 1.709 0.970 2.323 H17 K9L 31
K9L H17A H17A H 0 0 N N N N N N 16.137 2.286 56.409 1.080 2.291 1.309 H17A K9L 32
K9L H18 H18 H 0 1 N N N N N N 14.669 4.151 57.296 0.653 0.678 -0.525 H18 K9L 33
K9L H18A H18A H 0 0 N N N N N N 16.068 4.712 58.272 1.283 -0.642 0.489 H18A K9L 34
K9L HN19 HN19 H 0 0 N N N N N N 16.170 4.339 55.360 -0.470 -0.106 2.085 HN19 K9L 35
K9L "H2'" "H2'" H 0 1 N N N N N N 18.500 8.786 54.577 -5.032 1.318 -1.195 "H2'" K9L 36
K9L H21 H21 H 0 1 N N N N N N 18.171 5.373 57.345 -0.962 -1.126 -0.586 H21 K9L 37
K9L H22 H22 H 0 1 N N N N N N 19.515 3.953 55.591 -2.290 -2.821 0.755 H22 K9L 38
K9L H22A H22A H 0 0 N N N N N N 17.998 3.637 54.683 -2.092 -1.781 2.265 H22A K9L 39
K9L H23 H23 H 0 1 N N N N N N 17.714 6.252 54.306 -3.285 0.133 1.104 H23 K9L 40
K9L H24 H24 H 0 1 N N N N N N 20.419 5.672 55.587 -3.612 -2.062 -1.000 H24 K9L 41
K9L H24A H24A H 0 0 N N N N N N 19.556 6.985 56.457 -3.373 -0.405 -1.605 H24A K9L 42
K9L "H4'" "H4'" H 0 1 N N N N N N 21.684 10.061 52.004 -8.877 0.081 0.186 "H4'" K9L 43
K9L "H5'" "H5'" H 0 1 N N N N N N 22.998 8.061 52.632 -7.975 -2.153 0.692 "H5'" K9L 44
K9L "H6'" "H6'" H 0 1 N N N N N N 22.064 6.433 54.236 -5.602 -2.650 0.260 "H6'" K9L 45
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K9L N01 C02 DOUB Y N 1
K9L N01 C05 SING Y N 2
K9L C02 N03 SING Y N 3
K9L N03 C04 SING Y N 4
K9L N03 C12 SING N N 5
K9L C04 C05 DOUB Y N 6
K9L "C1'" "C2'" DOUB Y N 7
K9L "C1'" C24 SING N N 8
K9L "C1'" "C6'" SING Y N 9
K9L N11 C12 DOUB Y N 10
K9L N11 C16 SING Y N 11
K9L C12 N13 SING Y N 12
K9L N13 C14 DOUB Y N 13
K9L C14 C15 SING Y N 14
K9L C15 C16 DOUB Y N 15
K9L C16 C17 SING N N 16
K9L C17 C18 SING N N 17
K9L C18 N19 SING N N 18
K9L N19 C21 SING N N 19
K9L "C2'" "C3'" SING Y N 20
K9L C21 C22 SING N N 21
K9L C21 C23 SING N N 22
K9L C22 C23 SING N N 23
K9L C23 C24 SING N N 24
K9L "C3'" "C4'" DOUB Y N 25
K9L "C3'" "F7'" SING N N 26
K9L "C4'" "C5'" SING Y N 27
K9L "C5'" "C6'" DOUB Y N 28
K9L C02 H02 SING N N 29
K9L C04 H04 SING N N 30
K9L C05 H05 SING N N 31
K9L C14 H14 SING N N 32
K9L C15 H15 SING N N 33
K9L C17 H17 SING N N 34
K9L C17 H17A SING N N 35
K9L C18 H18 SING N N 36
K9L C18 H18A SING N N 37
K9L N19 HN19 SING N N 38
K9L "C2'" "H2'" SING N N 39
K9L C21 H21 SING N N 40
K9L C22 H22 SING N N 41
K9L C22 H22A SING N N 42
K9L C23 H23 SING N N 43
K9L C24 H24 SING N N 44
K9L C24 H24A SING N N 45
K9L "C4'" "H4'" SING N N 46
K9L "C5'" "H5'" SING N N 47
K9L "C6'" "H6'" SING N N 48
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K9L SMILES ACDLabs 12.01 Fc1cccc(c1)CC4CC4NCCc2nc(ncc2)n3ccnc3
K9L InChI InChI 1.03 InChI=1S/C19H20FN5/c20-16-3-1-2-14(11-16)10-15-12-18(15)22-6-4-17-5-7-23-19(24-17)25-9-8-21-13-25/h1-3,5,7-9,11,13,15,18,22H,4,6,10,12H2/t15-,18-/m0/s1
K9L InChIKey InChI 1.03 CYEVFFVOLRMDHH-YJBOKZPZSA-N
K9L SMILES_CANONICAL CACTVS 3.385 Fc1cccc(C[C@H]2C[C@@H]2NCCc3ccnc(n3)n4ccnc4)c1
K9L SMILES CACTVS 3.385 Fc1cccc(C[CH]2C[CH]2NCCc3ccnc(n3)n4ccnc4)c1
K9L SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 c1cc(cc(c1)F)C[C@H]2C[C@@H]2NCCc3ccnc(n3)n4ccnc4
K9L SMILES "OpenEye OEToolkits" 1.7.6 c1cc(cc(c1)F)CC2CC2NCCc3ccnc(n3)n4ccnc4
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
K9L "SYSTEMATIC NAME" ACDLabs 12.01 (1S,2S)-2-(3-fluorobenzyl)-N-{2-[2-(1H-imidazol-1-yl)pyrimidin-4-yl]ethyl}cyclopropanamine
K9L "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 (1S,2S)-2-[(3-fluorophenyl)methyl]-N-[2-(2-imidazol-1-ylpyrimidin-4-yl)ethyl]cyclopropan-1-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K9L 'Create component' 2014-10-21 EBI
K9L 'Modify synonyms' 2014-10-30 EBI
K9L 'Modify synonyms' 2014-11-11 EBI
K9L 'Initial release' 2014-12-24 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
K9L N01 N 18.364 -4.926 1
K9L C02 C 16.897 -4.614 2
K9L N03 N 16.740 -3.123 3
K9L C04 C 18.111 -2.513 4
K9L C05 C 19.114 -3.627 5
K9L "C1'" C 5.598 1.176 6
K9L N11 N 14.142 -3.123 7
K9L C12 C 15.441 -2.373 8
K9L N13 N 15.441 -0.873 9
K9L C14 C 14.142 -0.123 10
K9L C15 C 12.843 -0.873 11
K9L C16 C 12.843 -2.373 12
K9L C17 C 11.544 -3.123 13
K9L C18 C 10.245 -2.373 14
K9L N19 N 8.946 -3.123 15
K9L "C2'" C 5.598 2.676 16
K9L C21 C 7.647 -2.373 17
K9L C22 C 6.147 -2.373 18
K9L C23 C 6.897 -1.074 19
K9L C24 C 6.897 0.426 20
K9L "C3'" C 4.299 3.426 21
K9L "C4'" C 3.000 2.676 22
K9L "C5'" C 3.000 1.176 23
K9L "C6'" C 4.299 0.426 24
K9L "F7'" F 4.299 4.926 25
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
K9L N01 C02 DOUBLE NONE 1
K9L N01 C05 SINGLE NONE 2
K9L C02 N03 SINGLE NONE 3
K9L N03 C04 SINGLE NONE 4
K9L N03 C12 SINGLE NONE 5
K9L C04 C05 DOUBLE NONE 6
K9L "C1'" "C2'" DOUBLE NONE 7
K9L "C1'" C24 SINGLE NONE 8
K9L "C1'" "C6'" SINGLE NONE 9
K9L N11 C12 DOUBLE NONE 10
K9L N11 C16 SINGLE NONE 11
K9L C12 N13 SINGLE NONE 12
K9L N13 C14 DOUBLE NONE 13
K9L C14 C15 SINGLE NONE 14
K9L C15 C16 DOUBLE NONE 15
K9L C16 C17 SINGLE NONE 16
K9L C17 C18 SINGLE NONE 17
K9L C18 N19 SINGLE NONE 18
K9L C21 N19 SINGLE BEGINWEDGE 19
K9L "C2'" "C3'" SINGLE NONE 20
K9L C21 C22 SINGLE NONE 21
K9L C21 C23 SINGLE NONE 22
K9L C22 C23 SINGLE NONE 23
K9L C23 C24 SINGLE BEGINDASH 24
K9L "C3'" "C4'" DOUBLE NONE 25
K9L "C3'" "F7'" SINGLE NONE 26
K9L "C4'" "C5'" SINGLE NONE 27
K9L "C5'" "C6'" DOUBLE NONE 28
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
K9L MurckoScaffold S1 scaffold 'c1ccc(C[C@H]2C[C@@H]2NCCc2ccnc(-n3ccnc3)n2)cc1' InChI=1S/C19H21N5/c1-2-4-15(5-3-1)12-16-13-18(16)21-8-6-17-7-9-22-19(23-17)24-11-10-20-14-24/h1-5,7,9-11,14,16,18,21H,6,8,12-13H2/t16-,18-/m0/s1 QSTRVLIODFCPON-WMZOPIPTSA-N
K9L cyclopropane F1 fragment C1CC1 InChI=1S/C3H6/c1-2-3-1/h1-3H2 LVZWSLJZHVFIQJ-UHFFFAOYSA-N
K9L imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
K9L phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
K9L pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
K9L N01 S1 1
K9L C02 S1 1
K9L N03 S1 1
K9L C04 S1 1
K9L C05 S1 1
K9L "C1'" S1 1
K9L N11 S1 1
K9L C12 S1 1
K9L N13 S1 1
K9L C14 S1 1
K9L C15 S1 1
K9L C16 S1 1
K9L C17 S1 1
K9L C18 S1 1
K9L N19 S1 1
K9L "C2'" S1 1
K9L C21 S1 1
K9L C22 S1 1
K9L C23 S1 1
K9L C24 S1 1
K9L "C3'" S1 1
K9L "C4'" S1 1
K9L "C5'" S1 1
K9L "C6'" S1 1
K9L C21 F1 1
K9L C22 F1 1
K9L C23 F1 1
K9L C04 F2 1
K9L C05 F2 1
K9L N01 F2 1
K9L C02 F2 1
K9L N03 F2 1
K9L "C1'" F3 1
K9L "C2'" F3 1
K9L "C3'" F3 1
K9L "C4'" F3 1
K9L "C5'" F3 1
K9L "C6'" F3 1
K9L C15 F4 1
K9L C14 F4 1
K9L N13 F4 1
K9L C12 F4 1
K9L N11 F4 1
K9L C16 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id K9L
_pdbe_chem_comp_rdkit_properties.exactmw 337.170
_pdbe_chem_comp_rdkit_properties.amw 337.402
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 25
_pdbe_chem_comp_rdkit_properties.NumAtoms 45
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.316
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 173.680
_pdbe_chem_comp_rdkit_properties.tpsa 55.630
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.265
_pdbe_chem_comp_rdkit_properties.CrippenMR 91.667
_pdbe_chem_comp_rdkit_properties.chi0v 12.114
_pdbe_chem_comp_rdkit_properties.chi1v 6.649
_pdbe_chem_comp_rdkit_properties.chi2v 2.714
_pdbe_chem_comp_rdkit_properties.chi3v 2.714
_pdbe_chem_comp_rdkit_properties.chi4v 1.619
_pdbe_chem_comp_rdkit_properties.chi0n 32.114
_pdbe_chem_comp_rdkit_properties.chi1n 16.596
_pdbe_chem_comp_rdkit_properties.chi2n 2.714
_pdbe_chem_comp_rdkit_properties.chi3n 2.714
_pdbe_chem_comp_rdkit_properties.chi4n 1.619
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.600
_pdbe_chem_comp_rdkit_properties.kappa1 4.977
_pdbe_chem_comp_rdkit_properties.kappa2 7.107
_pdbe_chem_comp_rdkit_properties.kappa3 4.086
_pdbe_chem_comp_rdkit_properties.Phi 1.415
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
K9L UniChem ChEMBL CHEMBL3547162
K9L UniChem PDBe K9L
K9L UniChem ZINC ZINC000263620340
K9L UniChem PubChem 118730387
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
K9L N01 8.627 0.888 0.936 ETKDGv3 1
K9L C02 7.832 -0.064 0.566 ETKDGv3 2
K9L N03 6.508 0.395 0.328 ETKDGv3 3
K9L C04 6.580 1.784 0.603 ETKDGv3 4
K9L C05 7.822 2.069 0.958 ETKDGv3 5
K9L "C1'" -5.175 0.209 -0.445 ETKDGv3 6
K9L N11 4.219 0.214 -0.259 ETKDGv3 7
K9L C12 5.372 -0.368 -0.088 ETKDGv3 8
K9L N13 5.498 -1.783 -0.314 ETKDGv3 9
K9L C14 4.475 -2.494 -0.685 ETKDGv3 10
K9L C15 3.164 -1.852 -0.878 ETKDGv3 11
K9L C16 3.061 -0.530 -0.678 ETKDGv3 12
K9L C17 1.744 0.176 -0.822 ETKDGv3 13
K9L C18 0.954 0.114 0.490 ETKDGv3 14
K9L N19 -0.296 0.876 0.375 ETKDGv3 15
K9L "C2'" -5.883 1.331 -0.222 ETKDGv3 16
K9L C21 -1.348 0.049 -0.242 ETKDGv3 17
K9L C22 -2.206 -0.750 0.737 ETKDGv3 18
K9L C23 -2.764 0.513 0.084 ETKDGv3 19
K9L C24 -3.791 0.278 -1.030 ETKDGv3 20
K9L "C3'" -7.228 1.254 0.389 ETKDGv3 21
K9L "C4'" -7.739 0.066 0.736 ETKDGv3 22
K9L "C5'" -6.960 -1.168 0.510 ETKDGv3 23
K9L "C6'" -5.745 -1.103 -0.047 ETKDGv3 24
K9L "F7'" -7.939 2.389 0.600 ETKDGv3 25
K9L H02 8.151 -1.092 0.454 ETKDGv3 26
K9L H04 5.758 2.485 0.533 ETKDGv3 27
K9L H05 8.185 3.051 1.229 ETKDGv3 28
K9L H14 4.588 -3.558 -0.848 ETKDGv3 29
K9L H15 2.307 -2.446 -1.172 ETKDGv3 30
K9L H17 1.159 -0.282 -1.648 ETKDGv3 31
K9L H17A 1.928 1.239 -1.090 ETKDGv3 32
K9L H18 0.756 -0.945 0.777 ETKDGv3 33
K9L H18A 1.578 0.563 1.295 ETKDGv3 34
K9L HN19 -0.575 1.181 1.338 ETKDGv3 35
K9L "H2'" -5.477 2.301 -0.482 ETKDGv3 36
K9L H21 -1.176 -0.375 -1.255 ETKDGv3 37
K9L H22 -2.574 -1.713 0.325 ETKDGv3 38
K9L H22A -1.947 -0.633 1.810 ETKDGv3 39
K9L H23 -2.860 1.399 0.749 ETKDGv3 40
K9L H24 -3.726 1.117 -1.756 ETKDGv3 41
K9L H24A -3.580 -0.655 -1.598 ETKDGv3 42
K9L "H4'" -8.722 0.006 1.185 ETKDGv3 43
K9L "H5'" -7.375 -2.126 0.798 ETKDGv3 44
K9L "H6'" -5.179 -2.012 -0.206 ETKDGv3 45
#