data_KGN
#
_chem_comp.id KGN
_chem_comp.name "D-chiro inositol hexakisphosphate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H18 O24 P6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-01-30
_chem_comp.pdbx_modified_date 2018-09-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 660.035
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KGN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6FL7
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KGN P1 P1 P 0 1 N N N N N N -0.923 6.124 -2.512 -1.670 -2.782 -2.352 P1 KGN 1
KGN P2 P2 P 0 1 N N N N N N -5.386 3.641 -4.330 -3.922 -0.377 1.273 P2 KGN 2
KGN P3 P3 P 0 1 N N N N N N -4.572 3.276 -8.700 -2.142 3.160 -0.507 P3 KGN 3
KGN P4 P4 P 0 1 N N N N N N -0.626 3.822 -9.679 2.085 3.214 0.480 P4 KGN 4
KGN P5 P5 P 0 1 N N N N N N 1.651 6.207 -6.383 3.949 -0.292 -1.273 P5 KGN 5
KGN P6 P6 P 0 1 N N N N N N -2.653 9.148 -5.518 1.755 -2.723 2.371 P6 KGN 6
KGN C1 C1 C 0 1 N N N N N N -2.522 6.007 -4.647 -0.719 -1.593 -0.156 C1 KGN 7
KGN C2 C2 C 0 1 N N N N N N -3.500 5.117 -5.439 -1.384 -0.350 0.437 C2 KGN 8
KGN C3 C3 C 0 1 N N N N N N -3.080 4.462 -6.766 -0.749 0.905 -0.165 C3 KGN 9
KGN C4 C4 C 0 1 N N N N N N -1.875 5.047 -7.492 0.746 0.924 0.156 C4 KGN 10
KGN C5 C5 C 0 1 N N N N N N -0.934 5.647 -6.470 1.411 -0.319 -0.437 C5 KGN 11
KGN C6 C6 C 0 1 N N N N N N -1.595 6.724 -5.604 0.776 -1.574 0.166 C6 KGN 12
KGN O11 O1 O 0 1 N N N N N N -1.737 5.309 -3.663 -0.902 -1.601 -1.573 O11 KGN 13
KGN O12 O2 O 0 1 N N N N N N -3.855 4.011 -4.626 -2.782 -0.368 0.137 O12 KGN 14
KGN O13 O3 O 0 1 N N N N N N -4.232 4.446 -7.622 -1.370 2.067 0.389 O13 KGN 15
KGN O14 O4 O 0 1 N N N N N N -1.190 3.960 -8.152 1.340 2.096 -0.407 O14 KGN 16
KGN O15 O5 O 0 1 N N N N N N 0.232 6.137 -7.130 2.809 -0.301 -0.137 O15 KGN 17
KGN O16 O6 O 0 1 N N N N N N -2.353 7.742 -6.278 0.959 -1.566 1.583 O16 KGN 18
KGN O21 O7 O 0 1 N N N N N N -1.132 7.586 -2.806 -3.019 -2.961 -1.771 O21 KGN 19
KGN O22 O8 O 0 1 N N N N N N -5.596 2.265 -4.917 -5.368 -0.529 0.581 O22 KGN 20
KGN O23 O9 O 0 1 N N N N N N -4.458 3.992 -10.035 -1.238 3.655 -1.569 O23 KGN 21
KGN O24 O10 O 0 1 N N N N N N 0.854 4.112 -9.588 1.019 3.923 1.456 O24 KGN 22
KGN O25 O11 O 0 1 N N N N N N 1.789 7.682 -6.089 5.398 -0.405 -0.580 O25 KGN 23
KGN O26 O12 O 0 1 N N N N N N -1.328 9.596 -4.921 1.878 -2.326 3.926 O26 KGN 24
KGN O31 O13 O 0 1 N N N N N N -1.532 5.625 -1.224 -1.802 -2.400 -3.910 O31 KGN 25
KGN O32 O14 O 0 1 N N N N N N -6.180 4.722 -5.025 -3.694 -1.514 2.193 O32 KGN 26
KGN O33 O15 O 0 1 N N N N N N -5.986 2.866 -8.377 -3.440 2.484 -1.178 O33 KGN 27
KGN O34 O16 O 0 1 N N N N N N -1.393 4.776 -10.568 3.146 2.575 1.289 O34 KGN 28
KGN O35 O17 O 0 1 N N N N N N 2.595 5.622 -7.383 3.748 -1.441 -2.184 O35 KGN 29
KGN O36 O18 O 0 1 N N N N N N -3.695 8.822 -4.481 0.955 -4.114 2.233 O36 KGN 30
KGN O41 O19 O 0 1 N N N N N N 0.526 5.736 -2.671 -0.837 -4.152 -2.204 O41 KGN 31
KGN O42 O20 O 0 1 N N N N N N -5.384 3.660 -2.819 -3.866 1.003 2.101 O42 KGN 32
KGN O43 O21 O 0 1 N N N N N N -3.579 2.160 -8.440 -2.600 4.390 0.425 O43 KGN 33
KGN O44 O22 O 0 1 N N N N N N -0.890 2.365 -9.972 2.742 4.319 -0.490 O44 KGN 34
KGN O45 O23 O 0 1 N N N N N N 1.525 5.336 -5.171 3.861 1.079 -2.112 O45 KGN 35
KGN O46 O24 O 0 1 N N N N N N -3.181 10.034 -6.620 3.108 -2.874 1.791 O46 KGN 36
KGN H1 H1 H 0 1 N N N N N N -3.123 6.772 -4.133 -1.172 -2.487 0.274 H1 KGN 37
KGN H2 H2 H 0 1 N N N N N N -4.401 5.716 -5.639 -1.245 -0.344 1.518 H2 KGN 38
KGN H3 H3 H 0 1 N N N N N N -2.827 3.418 -6.530 -0.889 0.899 -1.246 H3 KGN 39
KGN H4 H4 H 0 1 N N N N N N -2.199 5.813 -8.211 0.886 0.930 1.237 H4 KGN 40
KGN H5 H5 H 0 1 N N N N N N -0.630 4.835 -5.794 1.272 -0.325 -1.518 H5 KGN 41
KGN H6 H6 H 0 1 N N N N N N -0.804 7.205 -5.010 1.250 -2.460 -0.257 H6 KGN 42
KGN H7 H7 H 0 1 N N N N N N -6.208 2.319 -5.642 -6.104 -0.542 1.207 H7 KGN 43
KGN H8 H8 H 0 1 N N N N N N 1.062 4.870 -10.122 0.293 4.364 0.993 H8 KGN 44
KGN H9 H9 H 0 1 N N N N N N 2.495 8.045 -6.611 6.135 -0.405 -1.206 H9 KGN 45
KGN H10 H10 H 0 1 N N N N N N -1.037 10.390 -5.354 2.347 -2.980 4.463 H10 KGN 46
KGN H11 H11 H 0 1 N N N N N N -1.971 6.342 -0.782 -2.256 -3.069 -4.442 H11 KGN 47
KGN H12 H12 H 0 1 N N N N N N -6.563 3.135 -9.082 -4.078 2.137 -0.539 H12 KGN 48
KGN H13 H13 H 0 1 N N N N N N -4.515 9.242 -4.712 0.058 -4.089 2.593 H13 KGN 49
KGN H14 H14 H 0 1 N N N N N N 1.032 6.498 -2.929 0.060 -4.108 -2.565 H14 KGN 50
KGN H15 H15 H 0 1 N N N N N N -5.911 4.388 -2.510 -4.009 1.792 1.561 H15 KGN 51
KGN H16 H16 H 0 1 N N N N N N -3.002 2.068 -9.189 -3.072 5.089 -0.049 H16 KGN 52
KGN H17 H17 H 0 1 N N N N N N -1.512 2.293 -10.687 3.208 5.025 -0.023 H17 KGN 53
KGN H18 H18 H 0 1 N N N N N N 2.077 4.569 -5.273 3.984 1.876 -1.577 H18 KGN 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KGN O34 P4 DOUB N N 1
KGN O23 P3 DOUB N N 2
KGN O44 P4 SING N N 3
KGN P4 O24 SING N N 4
KGN P4 O14 SING N N 5
KGN P3 O43 SING N N 6
KGN P3 O33 SING N N 7
KGN P3 O13 SING N N 8
KGN O14 C4 SING N N 9
KGN O13 C3 SING N N 10
KGN C4 C3 SING N N 11
KGN C4 C5 SING N N 12
KGN O35 P5 DOUB N N 13
KGN O15 C5 SING N N 14
KGN O15 P5 SING N N 15
KGN C3 C2 SING N N 16
KGN O46 P6 DOUB N N 17
KGN C5 C6 SING N N 18
KGN P5 O25 SING N N 19
KGN P5 O45 SING N N 20
KGN O16 C6 SING N N 21
KGN O16 P6 SING N N 22
KGN C6 C1 SING N N 23
KGN P6 O26 SING N N 24
KGN P6 O36 SING N N 25
KGN C2 C1 SING N N 26
KGN C2 O12 SING N N 27
KGN O32 P2 DOUB N N 28
KGN O22 P2 SING N N 29
KGN C1 O11 SING N N 30
KGN O12 P2 SING N N 31
KGN P2 O42 SING N N 32
KGN O11 P1 SING N N 33
KGN O21 P1 DOUB N N 34
KGN O41 P1 SING N N 35
KGN P1 O31 SING N N 36
KGN C1 H1 SING N N 37
KGN C2 H2 SING N N 38
KGN C3 H3 SING N N 39
KGN C4 H4 SING N N 40
KGN C5 H5 SING N N 41
KGN C6 H6 SING N N 42
KGN O22 H7 SING N N 43
KGN O24 H8 SING N N 44
KGN O25 H9 SING N N 45
KGN O26 H10 SING N N 46
KGN O31 H11 SING N N 47
KGN O33 H12 SING N N 48
KGN O36 H13 SING N N 49
KGN O41 H14 SING N N 50
KGN O42 H15 SING N N 51
KGN O43 H16 SING N N 52
KGN O44 H17 SING N N 53
KGN O45 H18 SING N N 54
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KGN InChI InChI 1.03 InChI=1S/C6H18O24P6/c7-31(8,9)25-1-2(26-32(10,11)12)4(28-34(16,17)18)6(30-36(22,23)24)5(29-35(19,20)21)3(1)27-33(13,14)15/h1-6H,(H2,7,8,9)(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)(H2,19,20,21)(H2,22,23,24)/t1-,2-,3-,4-,5+,6+/m0/s1
KGN InChIKey InChI 1.03 IMQLKJBTEOYOSI-LKPKBOIGSA-N
KGN SMILES_CANONICAL CACTVS 3.385 O[P](O)(=O)O[C@H]1[C@@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O
KGN SMILES CACTVS 3.385 O[P](O)(=O)O[CH]1[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O
KGN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C1(C(C(C(C(C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O
KGN SMILES "OpenEye OEToolkits" 2.0.6 C1(C(C(C(C(C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O
#
_pdbx_chem_comp_identifier.comp_id KGN
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier "(2,3,4,5,6-pentaphosphonooxycyclohexyl) dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KGN 'Create component' 2018-01-30 EBI
KGN 'Initial release' 2018-09-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KGN P1 P -2.667 2.627 1
KGN P2 P -3.614 -1.127 2
KGN P3 P -0.751 -4.124 3
KGN P4 P 3.223 -3.197 4
KGN P5 P 3.279 2.930 5
KGN P6 P -0.009 3.326 6
KGN C1 C -0.789 0.426 7
KGN C2 C -0.790 -1.069 8
KGN C3 C 0.509 -1.809 9
KGN C4 C 1.804 -1.058 10
KGN C5 C 1.798 0.436 11
KGN C6 C 0.506 1.180 12
KGN O11 O -2.266 1.102 13
KGN O12 O -2.155 -1.836 14
KGN O13 O 0.529 -3.314 15
KGN O14 O 3.126 -1.742 16
KGN O15 O 3.180 1.278 17
KGN O16 O 0.795 2.648 18
KGN O21 O -2.947 4.096 19
KGN O22 O -4.255 -2.467 20
KGN O23 O -2.006 -4.940 21
KGN O24 O 1.731 -3.291 22
KGN O25 O 4.747 2.852 23
KGN O26 O 0.872 4.551 24
KGN O31 O -4.105 2.329 25
KGN O32 O -4.981 -0.497 26
KGN O33 O -1.567 -2.884 27
KGN O34 O 3.330 -4.682 28
KGN O35 O 3.354 4.415 29
KGN O36 O -0.714 1.973 30
KGN O41 O -1.566 2.922 31
KGN O42 O -3.049 0.195 32
KGN O43 O 0.057 -5.378 33
KGN O44 O 4.723 -3.084 34
KGN O45 O 1.921 3.063 35
KGN O46 O -1.253 4.148 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KGN O34 P4 DOUBLE NONE 1
KGN O23 P3 DOUBLE NONE 2
KGN O44 P4 SINGLE NONE 3
KGN P4 O24 SINGLE NONE 4
KGN P4 O14 SINGLE NONE 5
KGN P3 O43 SINGLE NONE 6
KGN P3 O33 SINGLE NONE 7
KGN P3 O13 SINGLE NONE 8
KGN C4 O14 SINGLE BEGINWEDGE 9
KGN C3 O13 SINGLE BEGINDASH 10
KGN C4 C3 SINGLE NONE 11
KGN C4 C5 SINGLE NONE 12
KGN O35 P5 DOUBLE NONE 13
KGN C5 O15 SINGLE BEGINDASH 14
KGN O15 P5 SINGLE NONE 15
KGN C3 C2 SINGLE NONE 16
KGN O46 P6 DOUBLE NONE 17
KGN C5 C6 SINGLE NONE 18
KGN P5 O25 SINGLE NONE 19
KGN P5 O45 SINGLE NONE 20
KGN C6 O16 SINGLE BEGINDASH 21
KGN O16 P6 SINGLE NONE 22
KGN C6 C1 SINGLE NONE 23
KGN P6 O26 SINGLE NONE 24
KGN P6 O36 SINGLE NONE 25
KGN C2 C1 SINGLE NONE 26
KGN C2 O12 SINGLE BEGINWEDGE 27
KGN O32 P2 DOUBLE NONE 28
KGN O22 P2 SINGLE NONE 29
KGN C1 O11 SINGLE BEGINWEDGE 30
KGN O12 P2 SINGLE NONE 31
KGN P2 O42 SINGLE NONE 32
KGN O11 P1 SINGLE NONE 33
KGN O21 P1 DOUBLE NONE 34
KGN O41 P1 SINGLE NONE 35
KGN P1 O31 SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KGN MurckoScaffold S1 scaffold C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
KGN cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
KGN phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KGN C1 S1 1
KGN C2 S1 1
KGN C3 S1 1
KGN C4 S1 1
KGN C5 S1 1
KGN C6 S1 1
KGN C1 F1 1
KGN C6 F1 1
KGN C5 F1 1
KGN C4 F1 1
KGN C3 F1 1
KGN C2 F1 1
KGN O11 F2 1
KGN P1 F2 1
KGN O21 F2 1
KGN O41 F2 1
KGN O31 F2 1
KGN O12 F2 2
KGN P2 F2 2
KGN O32 F2 2
KGN O22 F2 2
KGN O42 F2 2
KGN O13 F2 3
KGN P3 F2 3
KGN O23 F2 3
KGN O43 F2 3
KGN O33 F2 3
KGN O14 F2 4
KGN P4 F2 4
KGN O34 F2 4
KGN O44 F2 4
KGN O24 F2 4
KGN O15 F2 5
KGN P5 F2 5
KGN O35 F2 5
KGN O25 F2 5
KGN O45 F2 5
KGN O16 F2 6
KGN P6 F2 6
KGN O46 F2 6
KGN O26 F2 6
KGN O36 F2 6
#
_pdbe_chem_comp_rdkit_properties.comp_id KGN
_pdbe_chem_comp_rdkit_properties.exactmw 659.861
_pdbe_chem_comp_rdkit_properties.amw 660.030
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 24
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 12
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 24
_pdbe_chem_comp_rdkit_properties.NumHBD 12
_pdbe_chem_comp_rdkit_properties.NumHBA 24
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 30
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 223.397
_pdbe_chem_comp_rdkit_properties.tpsa 400.560
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.133
_pdbe_chem_comp_rdkit_properties.CrippenMR 101.503
_pdbe_chem_comp_rdkit_properties.chi0v 20.848
_pdbe_chem_comp_rdkit_properties.chi1v 15.870
_pdbe_chem_comp_rdkit_properties.chi2v 4.893
_pdbe_chem_comp_rdkit_properties.chi3v 4.893
_pdbe_chem_comp_rdkit_properties.chi4v 4.124
_pdbe_chem_comp_rdkit_properties.chi0n 33.481
_pdbe_chem_comp_rdkit_properties.chi1n 15.006
_pdbe_chem_comp_rdkit_properties.chi2n 2.456
_pdbe_chem_comp_rdkit_properties.chi3n 2.456
_pdbe_chem_comp_rdkit_properties.chi4n 1.787
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.660
_pdbe_chem_comp_rdkit_properties.kappa1 15.603
_pdbe_chem_comp_rdkit_properties.kappa2 11.642
_pdbe_chem_comp_rdkit_properties.kappa3 13.144
_pdbe_chem_comp_rdkit_properties.Phi 5.046
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KGN UniChem PDBe KGN
KGN UniChem SureChEMBL SCHEMBL9164308
KGN UniChem 'PubChem TPHARMA' 16200361
KGN UniChem 'Probes And Drugs' PD006549
KGN UniChem Nikkaji J1.747.284D
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KGN P1 3.321 -0.996 1.611 ETKDGv3 1
KGN P2 2.765 2.724 -1.305 ETKDGv3 2
KGN P3 -0.998 3.846 1.280 ETKDGv3 3
KGN P4 -3.972 0.912 -0.021 ETKDGv3 4
KGN P5 -2.151 -3.065 1.351 ETKDGv3 5
KGN P6 0.881 -2.656 -2.421 ETKDGv3 6
KGN C1 1.465 -0.204 0.014 ETKDGv3 7
KGN C2 0.927 1.203 -0.331 ETKDGv3 8
KGN C3 -0.387 1.494 0.426 ETKDGv3 9
KGN C4 -1.446 0.412 0.127 ETKDGv3 10
KGN C5 -0.907 -0.994 0.467 ETKDGv3 11
KGN C6 0.405 -1.285 -0.293 ETKDGv3 12
KGN O11 1.805 -0.242 1.391 ETKDGv3 13
KGN O12 1.885 2.172 0.052 ETKDGv3 14
KGN O13 -0.886 2.744 -0.019 ETKDGv3 15
KGN O14 -2.581 0.661 0.939 ETKDGv3 16
KGN O15 -1.879 -1.951 0.085 ETKDGv3 17
KGN O16 0.133 -1.308 -1.686 ETKDGv3 18
KGN O21 3.651 -1.008 3.086 ETKDGv3 19
KGN O22 3.218 1.433 -2.306 ETKDGv3 20
KGN O23 -1.380 5.203 0.735 ETKDGv3 21
KGN O24 -4.351 -0.497 -0.882 ETKDGv3 22
KGN O25 -3.159 -4.302 0.791 ETKDGv3 23
KGN O26 2.563 -2.545 -2.269 ETKDGv3 24
KGN O31 3.266 -2.592 1.049 ETKDGv3 25
KGN O32 4.017 3.416 -0.817 ETKDGv3 26
KGN O33 0.494 3.969 2.072 ETKDGv3 27
KGN O34 -3.745 2.060 -0.981 ETKDGv3 28
KGN O35 -2.829 -2.363 2.507 ETKDGv3 29
KGN O36 0.342 -4.088 -1.696 ETKDGv3 30
KGN O41 4.522 -0.134 0.784 ETKDGv3 31
KGN O42 1.836 3.840 -2.177 ETKDGv3 32
KGN O43 -2.190 3.336 2.370 ETKDGv3 33
KGN O44 -5.267 1.296 0.998 ETKDGv3 34
KGN O45 -0.687 -3.731 1.879 ETKDGv3 35
KGN O46 0.518 -2.679 -3.888 ETKDGv3 36
KGN H1 2.334 -0.380 -0.660 ETKDGv3 37
KGN H2 0.678 1.232 -1.419 ETKDGv3 38
KGN H3 -0.165 1.454 1.520 ETKDGv3 39
KGN H4 -1.653 0.442 -0.970 ETKDGv3 40
KGN H5 -0.684 -0.996 1.563 ETKDGv3 41
KGN H6 0.786 -2.255 0.100 ETKDGv3 42
KGN H7 2.524 1.393 -3.011 ETKDGv3 43
KGN H8 -3.769 -0.479 -1.683 ETKDGv3 44
KGN H9 -2.710 -4.644 -0.023 ETKDGv3 45
KGN H10 2.805 -1.709 -2.742 ETKDGv3 46
KGN H11 3.728 -2.571 0.174 ETKDGv3 47
KGN H12 0.320 4.558 2.849 ETKDGv3 48
KGN H13 -0.646 -4.026 -1.719 ETKDGv3 49
KGN H14 4.400 0.806 1.070 ETKDGv3 50
KGN H15 1.012 3.353 -2.430 ETKDGv3 51
KGN H16 -1.741 2.669 2.948 ETKDGv3 52
KGN H17 -6.052 1.355 0.397 ETKDGv3 53
KGN H18 -0.368 -4.276 1.117 ETKDGv3 54
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