data_KHQ
#
_chem_comp.id KHQ
_chem_comp.name
1-[4-[(1~{R})-1-[2-[[5-[1-(cyclopropylmethyl)pyrazol-4-yl]-1~{H}-benzimidazol-2-yl]amino]pyridin-4-yl]ethyl]piperazin-1-yl]-3,3,3-tris(fluoranyl)propan-1-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H31 F3 N8 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-05-22
_chem_comp.pdbx_modified_date 2019-12-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 552.594
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KHQ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6RST
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KHQ C4 C1 C 0 1 Y N N N N N 44.708 99.522 95.609 -2.407 2.013 -1.310 C4 KHQ 1
KHQ C14 C2 C 0 1 N N N N N N 51.366 102.985 95.484 -9.028 -3.024 0.176 C14 KHQ 2
KHQ C5 C3 C 0 1 Y N N N N N 45.516 98.546 96.175 -2.624 2.301 0.030 C5 KHQ 3
KHQ C6 C4 C 0 1 N N R N N N 46.458 97.694 95.332 -3.989 2.715 0.518 C6 KHQ 4
KHQ C11 C5 C 0 1 N N N N N N 50.498 100.666 96.092 -8.084 -0.766 -0.225 C11 KHQ 5
KHQ C8 C6 C 0 1 N N N N N N 48.391 98.322 96.692 -4.773 0.477 0.028 C8 KHQ 6
KHQ C9 C7 C 0 1 N N N N N N 49.927 98.330 96.564 -5.752 -0.321 -0.839 C9 KHQ 7
KHQ C13 C8 C 0 1 N N N N N N 50.473 101.818 95.087 -7.768 -2.240 -0.196 C13 KHQ 8
KHQ N2 N1 N 0 1 Y N N N N N 43.857 100.073 97.735 -0.149 1.546 -0.865 N2 KHQ 9
KHQ C3 C9 C 0 1 Y N N N N N 43.873 100.273 96.428 -1.145 1.635 -1.725 C3 KHQ 10
KHQ C1 C10 C 0 1 Y N N N N N 44.623 99.124 98.283 -0.316 1.813 0.421 C1 KHQ 11
KHQ C18 C11 C 0 1 N N N N N N 49.716 99.176 94.308 -7.406 1.566 -0.565 C18 KHQ 12
KHQ C19 C12 C 0 1 N N N N N N 48.803 97.933 94.346 -6.361 2.291 0.292 C19 KHQ 13
KHQ C20 C13 C 0 1 N N N N N N 45.927 97.626 93.904 -4.212 4.197 0.211 C20 KHQ 14
KHQ C21 C14 C 0 1 Y N N N N N 45.470 98.349 97.530 -1.560 2.199 0.908 C21 KHQ 15
KHQ C23 C15 C 0 1 Y N N N N N 43.932 99.503 100.453 1.974 1.221 0.838 C23 KHQ 16
KHQ C25 C16 C 0 1 Y N N N N N 43.241 99.983 102.383 3.567 0.466 -0.503 C25 KHQ 17
KHQ C26 C17 C 0 1 Y N N N N N 42.709 100.882 101.470 4.041 0.523 0.819 C26 KHQ 18
KHQ C27 C18 C 0 1 Y N N N N N 41.854 101.871 101.908 5.350 0.132 1.100 C27 KHQ 19
KHQ C28 C19 C 0 1 Y N N N N N 41.551 101.926 103.258 6.171 -0.310 0.072 C28 KHQ 20
KHQ C29 C20 C 0 1 Y N N N N N 42.077 101.024 104.168 5.690 -0.363 -1.239 C29 KHQ 21
KHQ C30 C21 C 0 1 Y N N N N N 42.942 100.042 103.730 4.398 0.022 -1.522 C30 KHQ 22
KHQ C31 C22 C 0 1 Y N N N N N 40.724 102.915 103.732 7.565 -0.728 0.366 C31 KHQ 23
KHQ C32 C23 C 0 1 Y N N N N N 40.169 103.900 103.033 8.481 -1.176 -0.541 C32 KHQ 24
KHQ C34 C24 C 0 1 N N N N N N 38.689 105.835 103.670 10.862 -1.955 -0.459 C34 KHQ 25
KHQ C35 C25 C 0 1 N N N N N N 39.217 106.688 102.495 12.017 -1.022 -0.091 C35 KHQ 26
KHQ C36 C26 C 0 1 N N N N N N 39.133 106.042 101.110 13.426 -1.441 -0.516 C36 KHQ 27
KHQ C37 C27 C 0 1 N N N N N N 38.215 107.224 101.479 12.722 -0.286 -1.233 C37 KHQ 28
KHQ C39 C28 C 0 1 Y N N N N N 40.352 103.050 104.995 8.185 -0.728 1.630 C39 KHQ 29
KHQ F15 F1 F 0 1 N N N N N N 52.643 102.624 95.487 -10.027 -2.780 -0.773 F15 KHQ 30
KHQ F16 F2 F 0 1 N N N N N N 51.072 103.288 96.746 -8.735 -4.391 0.203 F16 KHQ 31
KHQ F17 F3 F 0 1 N N N N N N 51.117 104.034 94.703 -9.475 -2.618 1.438 F17 KHQ 32
KHQ N10 N2 N 0 1 N N N N N N 50.137 99.451 95.688 -7.119 0.124 -0.531 N10 KHQ 33
KHQ N22 N3 N 0 1 N N N N N N 44.648 98.865 99.569 0.764 1.706 1.293 N22 KHQ 34
KHQ N24 N4 N 0 1 Y N N N N N 44.032 99.162 101.726 2.258 0.918 -0.463 N24 KHQ 35
KHQ N33 N5 N 0 1 Y N N N N N 39.470 104.611 103.919 9.619 -1.449 0.129 N33 KHQ 36
KHQ N38 N6 N 0 1 Y N N N N N 39.574 104.130 105.050 9.409 -1.161 1.483 N38 KHQ 37
KHQ N40 N7 N 0 1 Y N N N N N 43.178 100.571 100.270 3.022 0.989 1.589 N40 KHQ 38
KHQ N7 N8 N 0 1 N N N N N N 47.787 98.338 95.320 -5.016 1.914 -0.160 N7 KHQ 39
KHQ O12 O1 O 0 1 N N N N N N 50.751 100.869 97.280 -9.207 -0.382 0.027 O12 KHQ 40
KHQ H1 H1 H 0 1 N N N N N N 44.728 99.696 94.543 -3.218 2.078 -2.020 H1 KHQ 41
KHQ H2 H2 H 0 1 N N N N N N 46.524 96.681 95.755 -4.054 2.554 1.594 H2 KHQ 42
KHQ H3 H3 H 0 1 N N N N N N 48.063 99.211 97.250 -4.921 0.218 1.077 H3 KHQ 43
KHQ H4 H4 H 0 1 N N N N N N 48.070 97.415 97.226 -3.750 0.240 -0.264 H4 KHQ 44
KHQ H5 H5 H 0 1 N N N N N N 50.298 97.396 96.117 -5.537 -0.143 -1.893 H5 KHQ 45
KHQ H6 H6 H 0 1 N N N N N N 50.410 98.487 97.540 -5.652 -1.384 -0.620 H6 KHQ 46
KHQ H7 H7 H 0 1 N N N N N N 49.439 102.183 95.001 -6.990 -2.430 0.544 H7 KHQ 47
KHQ H8 H8 H 0 1 N N N N N N 50.810 101.437 94.111 -7.420 -2.556 -1.179 H8 KHQ 48
KHQ H9 H9 H 0 1 N N N N N N 43.232 101.026 95.993 -0.972 1.410 -2.767 H9 KHQ 49
KHQ H10 H10 H 0 1 N N N N N N 50.596 98.978 93.678 -8.402 1.751 -0.163 H10 KHQ 50
KHQ H11 H11 H 0 1 N N N N N N 49.163 100.037 93.904 -7.351 1.926 -1.593 H11 KHQ 51
KHQ H12 H12 H 0 1 N N N N N N 48.356 97.734 93.361 -6.491 3.368 0.189 H12 KHQ 52
KHQ H13 H13 H 0 1 N N N N N N 49.352 97.043 94.687 -6.487 2.007 1.336 H13 KHQ 53
KHQ H14 H14 H 0 1 N N N N N N 44.937 97.147 93.903 -3.450 4.792 0.714 H14 KHQ 54
KHQ H15 H15 H 0 1 N N N N N N 45.843 98.644 93.495 -4.147 4.359 -0.865 H15 KHQ 55
KHQ H16 H16 H 0 1 N N N N N N 46.619 97.038 93.283 -5.199 4.497 0.564 H16 KHQ 56
KHQ H17 H17 H 0 1 N N N N N N 46.089 97.597 97.997 -1.693 2.416 1.958 H17 KHQ 57
KHQ H18 H18 H 0 1 N N N N N N 41.431 102.584 101.216 5.723 0.173 2.113 H18 KHQ 58
KHQ H19 H19 H 0 1 N N N N N N 41.812 101.089 105.213 6.335 -0.707 -2.034 H19 KHQ 59
KHQ H20 H20 H 0 1 N N N N N N 43.375 99.337 104.424 4.032 -0.021 -2.537 H20 KHQ 60
KHQ H21 H21 H 0 1 N N N N N N 40.264 104.085 101.973 8.322 -1.291 -1.603 H21 KHQ 61
KHQ H22 H22 H 0 1 N N N N N N 38.710 106.450 104.581 10.760 -1.997 -1.544 H22 KHQ 62
KHQ H23 H23 H 0 1 N N N N N N 37.652 105.544 103.448 11.065 -2.954 -0.074 H23 KHQ 63
KHQ H24 H24 H 0 1 N N N N N N 40.101 107.311 102.699 11.913 -0.496 0.858 H24 KHQ 64
KHQ H25 H25 H 0 1 N N N N N N 38.713 105.032 100.997 14.249 -1.191 0.153 H25 KHQ 65
KHQ H26 H26 H 0 1 N N N N N N 39.949 106.183 100.386 13.530 -2.381 -1.058 H26 KHQ 66
KHQ H27 H27 H 0 1 N N N N N N 38.374 108.209 101.017 12.362 -0.467 -2.246 H27 KHQ 67
KHQ H28 H28 H 0 1 N N N N N N 37.138 107.058 101.628 13.082 0.723 -1.035 H28 KHQ 68
KHQ H29 H29 H 0 1 N N N N N N 40.626 102.409 105.820 7.728 -0.423 2.560 H29 KHQ 69
KHQ H30 H30 H 0 1 N N N N N N 45.252 98.135 99.890 0.666 1.972 2.221 H30 KHQ 70
KHQ H31 H31 H 0 1 N N N N N N 44.594 98.430 102.111 1.655 1.003 -1.218 H31 KHQ 71
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KHQ C20 C6 SING N N 1
KHQ C18 C19 SING N N 2
KHQ C18 N10 SING N N 3
KHQ C19 N7 SING N N 4
KHQ F17 C14 SING N N 5
KHQ C13 C14 SING N N 6
KHQ C13 C11 SING N N 7
KHQ N7 C6 SING N N 8
KHQ N7 C8 SING N N 9
KHQ C6 C5 SING N N 10
KHQ C14 F15 SING N N 11
KHQ C14 F16 SING N N 12
KHQ C4 C5 DOUB Y N 13
KHQ C4 C3 SING Y N 14
KHQ N10 C11 SING N N 15
KHQ N10 C9 SING N N 16
KHQ C11 O12 DOUB N N 17
KHQ C5 C21 SING Y N 18
KHQ C3 N2 DOUB Y N 19
KHQ C9 C8 SING N N 20
KHQ C21 C1 DOUB Y N 21
KHQ N2 C1 SING Y N 22
KHQ C1 N22 SING N N 23
KHQ N22 C23 SING N N 24
KHQ N40 C23 DOUB Y N 25
KHQ N40 C26 SING Y N 26
KHQ C23 N24 SING Y N 27
KHQ C36 C37 SING N N 28
KHQ C36 C35 SING N N 29
KHQ C26 C27 DOUB Y N 30
KHQ C26 C25 SING Y N 31
KHQ C37 C35 SING N N 32
KHQ N24 C25 SING Y N 33
KHQ C27 C28 SING Y N 34
KHQ C25 C30 DOUB Y N 35
KHQ C35 C34 SING N N 36
KHQ C32 C31 DOUB Y N 37
KHQ C32 N33 SING Y N 38
KHQ C28 C31 SING N N 39
KHQ C28 C29 DOUB Y N 40
KHQ C34 N33 SING N N 41
KHQ C30 C29 SING Y N 42
KHQ C31 C39 SING Y N 43
KHQ N33 N38 SING Y N 44
KHQ C39 N38 DOUB Y N 45
KHQ C4 H1 SING N N 46
KHQ C6 H2 SING N N 47
KHQ C8 H3 SING N N 48
KHQ C8 H4 SING N N 49
KHQ C9 H5 SING N N 50
KHQ C9 H6 SING N N 51
KHQ C13 H7 SING N N 52
KHQ C13 H8 SING N N 53
KHQ C3 H9 SING N N 54
KHQ C18 H10 SING N N 55
KHQ C18 H11 SING N N 56
KHQ C19 H12 SING N N 57
KHQ C19 H13 SING N N 58
KHQ C20 H14 SING N N 59
KHQ C20 H15 SING N N 60
KHQ C20 H16 SING N N 61
KHQ C21 H17 SING N N 62
KHQ C27 H18 SING N N 63
KHQ C29 H19 SING N N 64
KHQ C30 H20 SING N N 65
KHQ C32 H21 SING N N 66
KHQ C34 H22 SING N N 67
KHQ C34 H23 SING N N 68
KHQ C35 H24 SING N N 69
KHQ C36 H25 SING N N 70
KHQ C36 H26 SING N N 71
KHQ C37 H27 SING N N 72
KHQ C37 H28 SING N N 73
KHQ C39 H29 SING N N 74
KHQ N22 H30 SING N N 75
KHQ N24 H31 SING N N 76
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KHQ InChI InChI 1.03 InChI=1S/C28H31F3N8O/c1-18(37-8-10-38(11-9-37)26(40)14-28(29,30)31)20-6-7-32-25(13-20)36-27-34-23-5-4-21(12-24(23)35-27)22-15-33-39(17-22)16-19-2-3-19/h4-7,12-13,15,17-19H,2-3,8-11,14,16H2,1H3,(H2,32,34,35,36)/t18-/m1/s1
KHQ InChIKey InChI 1.03 WEFRCKPVMWDRAK-GOSISDBHSA-N
KHQ SMILES_CANONICAL CACTVS 3.385 C[C@@H](N1CCN(CC1)C(=O)CC(F)(F)F)c2ccnc(Nc3[nH]c4ccc(cc4n3)c5cnn(CC6CC6)c5)c2
KHQ SMILES CACTVS 3.385 C[CH](N1CCN(CC1)C(=O)CC(F)(F)F)c2ccnc(Nc3[nH]c4ccc(cc4n3)c5cnn(CC6CC6)c5)c2
KHQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 C[C@H](c1ccnc(c1)Nc2[nH]c3ccc(cc3n2)c4cnn(c4)CC5CC5)N6CCN(CC6)C(=O)CC(F)(F)F
KHQ SMILES "OpenEye OEToolkits" 2.0.7 CC(c1ccnc(c1)Nc2[nH]c3ccc(cc3n2)c4cnn(c4)CC5CC5)N6CCN(CC6)C(=O)CC(F)(F)F
#
_pdbx_chem_comp_identifier.comp_id KHQ
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
1-[4-[(1~{R})-1-[2-[[5-[1-(cyclopropylmethyl)pyrazol-4-yl]-1~{H}-benzimidazol-2-yl]amino]pyridin-4-yl]ethyl]piperazin-1-yl]-3,3,3-tris(fluoranyl)propan-1-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KHQ 'Create component' 2019-05-22 PDBE
KHQ 'Initial release' 2020-01-01 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KHQ C4 C 19.060 0.971 1
KHQ C14 C 19.810 -8.122 2
KHQ C5 C 17.560 0.971 3
KHQ C6 C 16.810 -0.328 4
KHQ C11 C 19.810 -5.524 5
KHQ C8 C 16.810 -2.926 6
KHQ C9 C 17.560 -4.225 7
KHQ C13 C 19.060 -6.823 8
KHQ N2 N 19.060 3.569 9
KHQ C3 C 19.810 2.270 10
KHQ C1 C 17.560 3.569 11
KHQ C18 C 19.810 -2.926 12
KHQ C19 C 19.060 -1.627 13
KHQ C20 C 15.310 -0.328 14
KHQ C21 C 16.810 2.270 15
KHQ C23 C 15.310 4.868 16
KHQ C25 C 13.015 4.118 17
KHQ C26 C 13.015 5.618 18
KHQ C27 C 11.716 6.368 19
KHQ C28 C 10.417 5.618 20
KHQ C29 C 10.417 4.118 21
KHQ C30 C 11.716 3.368 22
KHQ C31 C 9.118 6.368 23
KHQ C32 C 7.747 5.758 24
KHQ C34 C 5.252 6.716 25
KHQ C35 C 4.370 7.929 26
KHQ C36 C 4.213 9.421 27
KHQ C37 C 3.000 8.540 28
KHQ C39 C 8.961 7.860 29
KHQ F15 F 21.109 -7.372 30
KHQ F16 F 18.511 -8.872 31
KHQ F17 F 20.560 -9.421 32
KHQ N10 N 19.060 -4.225 33
KHQ N22 N 16.810 4.868 34
KHQ N24 N 14.434 3.661 35
KHQ N33 N 6.744 6.873 36
KHQ N38 N 7.494 8.172 37
KHQ N40 N 14.434 6.075 38
KHQ N7 N 17.560 -1.627 39
KHQ O12 O 21.310 -5.524 40
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KHQ C6 C20 SINGLE BEGINDASH 1
KHQ C18 C19 SINGLE NONE 2
KHQ C18 N10 SINGLE NONE 3
KHQ C19 N7 SINGLE NONE 4
KHQ F17 C14 SINGLE NONE 5
KHQ C13 C14 SINGLE NONE 6
KHQ C13 C11 SINGLE NONE 7
KHQ N7 C6 SINGLE NONE 8
KHQ N7 C8 SINGLE NONE 9
KHQ C6 C5 SINGLE NONE 10
KHQ C14 F15 SINGLE NONE 11
KHQ C14 F16 SINGLE NONE 12
KHQ C4 C5 DOUBLE NONE 13
KHQ C4 C3 SINGLE NONE 14
KHQ N10 C11 SINGLE NONE 15
KHQ N10 C9 SINGLE NONE 16
KHQ C11 O12 DOUBLE NONE 17
KHQ C5 C21 SINGLE NONE 18
KHQ C3 N2 DOUBLE NONE 19
KHQ C9 C8 SINGLE NONE 20
KHQ C21 C1 DOUBLE NONE 21
KHQ N2 C1 SINGLE NONE 22
KHQ C1 N22 SINGLE NONE 23
KHQ N22 C23 SINGLE NONE 24
KHQ N40 C23 DOUBLE NONE 25
KHQ N40 C26 SINGLE NONE 26
KHQ C23 N24 SINGLE NONE 27
KHQ C36 C37 SINGLE NONE 28
KHQ C36 C35 SINGLE NONE 29
KHQ C26 C27 DOUBLE NONE 30
KHQ C26 C25 SINGLE NONE 31
KHQ C37 C35 SINGLE NONE 32
KHQ N24 C25 SINGLE NONE 33
KHQ C27 C28 SINGLE NONE 34
KHQ C25 C30 DOUBLE NONE 35
KHQ C35 C34 SINGLE NONE 36
KHQ C32 C31 DOUBLE NONE 37
KHQ C32 N33 SINGLE NONE 38
KHQ C28 C31 SINGLE NONE 39
KHQ C28 C29 DOUBLE NONE 40
KHQ C34 N33 SINGLE NONE 41
KHQ C30 C29 SINGLE NONE 42
KHQ C31 C39 SINGLE NONE 43
KHQ N33 N38 SINGLE NONE 44
KHQ C39 N38 DOUBLE NONE 45
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KHQ MurckoScaffold S1 scaffold 'c1cc(CN2CCNCC2)cc(Nc2nc3cc(-c4cnn(CC5CC5)c4)ccc3[nH]2)n1' InChI=1S/C24H28N8/c1-2-17(1)15-32-16-20(13-27-32)19-3-4-21-22(12-19)29-24(28-21)30-23-11-18(5-6-26-23)14-31-9-7-25-8-10-31/h3-6,11-13,16-17,25H,1-2,7-10,14-15H2,(H2,26,28,29,30) IWJRPBURSLUDBN-UHFFFAOYSA-N
KHQ amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
KHQ benzimidazole F2 fragment 'c1ccc2[nH]cnc2c1' InChI=1S/C7H6N2/c1-2-4-7-6(3-1)8-5-9-7/h1-5H,(H,8,9) HYZJCKYKOHLVJF-UHFFFAOYSA-N
KHQ cyclopropane F3 fragment C1CC1 InChI=1S/C3H6/c1-2-3-1/h1-3H2 LVZWSLJZHVFIQJ-UHFFFAOYSA-N
KHQ imidazole F4 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
KHQ phenyl F5 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
KHQ piperazine F6 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
KHQ pyrazole F7 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
KHQ pyridine F8 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
KHQ Z991479938 F9 fragment CN(C)Cc1ccnc(N)c1 InChI=1S/C8H13N3/c1-11(2)6-7-3-4-10-8(9)5-7/h3-5H,6H2,1-2H3,(H2,9,10) JXAOKSJVAAOSEM-UHFFFAOYSA-N
KHQ Z85920464 F10 fragment c1cc(CN2CCNCC2)ccn1 InChI=1S/C10H15N3/c1-3-11-4-2-10(1)9-13-7-5-12-6-8-13/h1-4,12H,5-9H2 XZYLSJPLCLKCMR-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KHQ C4 S1 1
KHQ C5 S1 1
KHQ C6 S1 1
KHQ C8 S1 1
KHQ C9 S1 1
KHQ N2 S1 1
KHQ C3 S1 1
KHQ C1 S1 1
KHQ C18 S1 1
KHQ C19 S1 1
KHQ C21 S1 1
KHQ C23 S1 1
KHQ C25 S1 1
KHQ C26 S1 1
KHQ C27 S1 1
KHQ C28 S1 1
KHQ C29 S1 1
KHQ C30 S1 1
KHQ C31 S1 1
KHQ C32 S1 1
KHQ C34 S1 1
KHQ C35 S1 1
KHQ C36 S1 1
KHQ C37 S1 1
KHQ C39 S1 1
KHQ N10 S1 1
KHQ N22 S1 1
KHQ N24 S1 1
KHQ N33 S1 1
KHQ N38 S1 1
KHQ N40 S1 1
KHQ N7 S1 1
KHQ N10 F1 1
KHQ C11 F1 1
KHQ O12 F1 1
KHQ C13 F1 1
KHQ C25 F2 1
KHQ N24 F2 1
KHQ C23 F2 1
KHQ N40 F2 1
KHQ C26 F2 1
KHQ C27 F2 1
KHQ C28 F2 1
KHQ C29 F2 1
KHQ C30 F2 1
KHQ C35 F3 1
KHQ C36 F3 1
KHQ C37 F3 1
KHQ C25 F4 1
KHQ C26 F4 1
KHQ N40 F4 1
KHQ C23 F4 1
KHQ N24 F4 1
KHQ C25 F5 1
KHQ C26 F5 1
KHQ C27 F5 1
KHQ C28 F5 1
KHQ C29 F5 1
KHQ C30 F5 1
KHQ N10 F6 1
KHQ C18 F6 1
KHQ C19 F6 1
KHQ N7 F6 1
KHQ C8 F6 1
KHQ C9 F6 1
KHQ C32 F7 1
KHQ C31 F7 1
KHQ C39 F7 1
KHQ N38 F7 1
KHQ N33 F7 1
KHQ C3 F8 1
KHQ C4 F8 1
KHQ C5 F8 1
KHQ C21 F8 1
KHQ C1 F8 1
KHQ N2 F8 1
KHQ C8 F9 1
KHQ N7 F9 1
KHQ C19 F9 1
KHQ C6 F9 1
KHQ C5 F9 1
KHQ C4 F9 1
KHQ C3 F9 1
KHQ N2 F9 1
KHQ C1 F9 1
KHQ N22 F9 1
KHQ C21 F9 1
KHQ C6 F10 1
KHQ N7 F10 1
KHQ C19 F10 1
KHQ C18 F10 1
KHQ N10 F10 1
KHQ C9 F10 1
KHQ C8 F10 1
KHQ C5 F10 1
KHQ C4 F10 1
KHQ C3 F10 1
KHQ N2 F10 1
KHQ C1 F10 1
KHQ C21 F10 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KHQ
_pdbe_chem_comp_rdkit_properties.exactmw 552.257
_pdbe_chem_comp_rdkit_properties.amw 552.605
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 40
_pdbe_chem_comp_rdkit_properties.NumAtoms 71
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.429
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 272.613
_pdbe_chem_comp_rdkit_properties.tpsa 94.970
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.508
_pdbe_chem_comp_rdkit_properties.CrippenMR 139.356
_pdbe_chem_comp_rdkit_properties.chi0v 19.120
_pdbe_chem_comp_rdkit_properties.chi1v 10.522
_pdbe_chem_comp_rdkit_properties.chi2v 4.639
_pdbe_chem_comp_rdkit_properties.chi3v 4.639
_pdbe_chem_comp_rdkit_properties.chi4v 2.897
_pdbe_chem_comp_rdkit_properties.chi0n 50.120
_pdbe_chem_comp_rdkit_properties.chi1n 25.917
_pdbe_chem_comp_rdkit_properties.chi2n 4.639
_pdbe_chem_comp_rdkit_properties.chi3n 4.639
_pdbe_chem_comp_rdkit_properties.chi4n 2.897
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.930
_pdbe_chem_comp_rdkit_properties.kappa1 8.541
_pdbe_chem_comp_rdkit_properties.kappa2 10.566
_pdbe_chem_comp_rdkit_properties.kappa3 6.113
_pdbe_chem_comp_rdkit_properties.Phi 2.256
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KHQ UniChem ChEMBL CHEMBL4435393
KHQ UniChem PDBe KHQ
KHQ UniChem PubChem 145714274
KHQ UniChem BindingDb 50520142
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KHQ C4 -2.497 0.133 2.718 ETKDGv3 1
KHQ C14 -9.826 1.700 -2.615 ETKDGv3 2
KHQ C5 -3.171 -0.616 1.828 ETKDGv3 3
KHQ C6 -4.650 -0.906 2.008 ETKDGv3 4
KHQ C11 -8.431 0.391 -0.939 ETKDGv3 5
KHQ C8 -5.295 1.273 0.999 ETKDGv3 6
KHQ C9 -6.028 0.750 -0.246 ETKDGv3 7
KHQ C13 -8.440 1.459 -2.007 ETKDGv3 8
KHQ N2 -0.452 -0.098 1.471 ETKDGv3 9
KHQ C3 -1.062 0.395 2.509 ETKDGv3 10
KHQ C1 -1.137 -0.908 0.495 ETKDGv3 11
KHQ C18 -7.643 -0.414 1.300 ETKDGv3 12
KHQ C19 -6.860 0.179 2.478 ETKDGv3 13
KHQ C20 -4.812 -1.846 3.218 ETKDGv3 14
KHQ C21 -2.445 -1.167 0.657 ETKDGv3 15
KHQ C23 0.956 -1.220 -0.917 ETKDGv3 16
KHQ C25 2.929 -1.322 -1.953 ETKDGv3 17
KHQ C26 3.009 -0.535 -0.768 ETKDGv3 18
KHQ C27 4.139 0.051 -0.376 ETKDGv3 19
KHQ C28 5.358 -0.141 -1.229 ETKDGv3 20
KHQ C29 5.263 -0.898 -2.360 ETKDGv3 21
KHQ C30 3.972 -1.528 -2.752 ETKDGv3 22
KHQ C31 6.640 0.489 -0.824 ETKDGv3 23
KHQ C32 7.756 0.591 -1.541 ETKDGv3 24
KHQ C34 10.157 1.329 -1.037 ETKDGv3 25
KHQ C35 10.822 0.018 -0.606 ETKDGv3 26
KHQ C36 12.302 0.122 -0.274 ETKDGv3 27
KHQ C37 11.281 -0.036 0.843 ETKDGv3 28
KHQ C39 6.944 1.115 0.472 ETKDGv3 29
KHQ F15 -9.758 2.760 -3.500 ETKDGv3 30
KHQ F16 -10.252 0.576 -3.302 ETKDGv3 31
KHQ F17 -10.738 2.005 -1.621 ETKDGv3 32
KHQ N10 -7.410 0.371 0.081 ETKDGv3 33
KHQ N22 -0.435 -1.440 -0.643 ETKDGv3 34
KHQ N24 1.600 -1.783 -2.075 ETKDGv3 35
KHQ N33 8.728 1.269 -0.760 ETKDGv3 36
KHQ N38 8.164 1.541 0.489 ETKDGv3 37
KHQ N40 1.731 -0.500 -0.148 ETKDGv3 38
KHQ N7 -5.424 0.363 2.162 ETKDGv3 39
KHQ O12 -9.309 -0.515 -0.957 ETKDGv3 40
KHQ H1 -2.993 0.553 3.584 ETKDGv3 41
KHQ H2 -5.013 -1.467 1.120 ETKDGv3 42
KHQ H3 -4.230 1.461 0.748 ETKDGv3 43
KHQ H4 -5.716 2.267 1.268 ETKDGv3 44
KHQ H5 -5.495 -0.126 -0.670 ETKDGv3 45
KHQ H6 -6.001 1.550 -1.014 ETKDGv3 46
KHQ H7 -7.732 1.169 -2.813 ETKDGv3 47
KHQ H8 -8.092 2.416 -1.562 ETKDGv3 48
KHQ H9 -0.513 0.999 3.219 ETKDGv3 49
KHQ H10 -8.723 -0.402 1.565 ETKDGv3 50
KHQ H11 -7.347 -1.470 1.127 ETKDGv3 51
KHQ H12 -7.303 1.167 2.732 ETKDGv3 52
KHQ H13 -7.002 -0.439 3.386 ETKDGv3 53
KHQ H14 -4.690 -1.285 4.170 ETKDGv3 54
KHQ H15 -4.054 -2.659 3.184 ETKDGv3 55
KHQ H16 -5.806 -2.338 3.203 ETKDGv3 56
KHQ H17 -2.975 -1.773 -0.067 ETKDGv3 57
KHQ H18 4.156 0.651 0.523 ETKDGv3 58
KHQ H19 6.120 -1.071 -2.995 ETKDGv3 59
KHQ H20 3.886 -2.128 -3.649 ETKDGv3 60
KHQ H21 7.923 0.228 -2.546 ETKDGv3 61
KHQ H22 10.315 1.469 -2.128 ETKDGv3 62
KHQ H23 10.592 2.210 -0.517 ETKDGv3 63
KHQ H24 10.499 -0.949 -1.048 ETKDGv3 64
KHQ H25 12.887 -0.798 -0.481 ETKDGv3 65
KHQ H26 12.751 1.138 -0.334 ETKDGv3 66
KHQ H27 11.260 -1.051 1.293 ETKDGv3 67
KHQ H28 11.120 0.885 1.443 ETKDGv3 68
KHQ H29 6.281 1.194 1.323 ETKDGv3 69
KHQ H30 -0.963 -2.028 -1.328 ETKDGv3 70
KHQ H31 1.184 -2.380 -2.824 ETKDGv3 71
#