data_KU2
#
_chem_comp.id KU2
_chem_comp.name
;2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-(2-phenoxyethyl)-1,6-dihydropyrimidine-4
-carboxamide
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H25 Cl N4 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms SRI-30023
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-27
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 529.008
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KU2
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5WF3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KU2 C10 C1 C 0 1 N N N N N N 128.662 193.089 282.344 2.688 1.522 0.097 C10 KU2 1
KU2 C13 C2 C 0 1 N N N N N N 133.855 195.273 280.628 -4.462 -2.216 0.681 C13 KU2 2
KU2 C14 C3 C 0 1 Y N N N N N 130.361 198.328 282.004 6.994 -3.355 -1.574 C14 KU2 3
KU2 C17 C4 C 0 1 Y N N N N N 128.442 196.377 281.495 5.137 -1.807 -0.226 C17 KU2 4
KU2 C18 C5 C 0 1 Y N N N N N 129.680 196.324 280.885 5.624 -1.394 -1.460 C18 KU2 5
KU2 C19 C6 C 0 1 Y N N N N N 130.634 197.294 281.139 6.555 -2.166 -2.128 C19 KU2 6
KU2 C20 C7 C 0 1 Y N N N N N 130.589 194.113 276.951 -9.100 -2.628 -0.972 C20 KU2 7
KU2 C21 C8 C 0 1 Y N N N N N 130.688 193.026 277.788 -8.400 -2.037 -2.008 C21 KU2 8
KU2 C22 C9 C 0 1 Y N N N N N 131.415 193.111 278.964 -7.057 -1.750 -1.861 C22 KU2 9
KU2 C24 C10 C 0 1 Y N N N N N 131.942 195.389 278.461 -7.114 -2.647 0.366 C24 KU2 10
KU2 C25 C11 C 0 1 Y N N N N N 131.213 195.291 277.287 -8.457 -2.933 0.213 C25 KU2 11
KU2 C1 C12 C 0 1 N N N N N N 129.804 194.728 285.050 0.181 3.273 0.316 C1 KU2 12
KU2 C11 C13 C 0 1 N N N N N N 127.391 193.908 282.482 3.608 0.515 -0.544 C11 KU2 13
KU2 C12 C14 C 0 1 N N N N N N 134.346 195.132 282.045 -2.962 -1.921 0.614 C12 KU2 14
KU2 C15 C15 C 0 1 Y N N N N N 129.134 198.405 282.624 6.505 -3.775 -0.351 C15 KU2 15
KU2 C16 C16 C 0 1 Y N N N N N 128.177 197.440 282.371 5.578 -3.005 0.325 C16 KU2 16
KU2 C2 C17 C 0 1 N N N N N N 131.710 196.014 284.604 -1.276 1.484 0.527 C2 KU2 17
KU2 C23 C18 C 0 1 Y N N N N N 132.041 194.295 279.295 -6.410 -2.054 -0.672 C23 KU2 18
KU2 C3 C19 C 0 1 N N N N N N 131.302 196.992 285.462 -2.302 2.331 0.913 C3 KU2 19
KU2 C4 C20 C 0 1 N N N N N N 130.060 196.820 286.159 -2.011 3.768 0.986 C4 KU2 20
KU2 C5 C21 C 0 1 N N N N N N 132.982 196.109 283.835 -1.507 0.025 0.433 C5 KU2 21
KU2 C6 C22 C 0 1 N N N N N N 130.797 191.888 285.068 2.731 4.546 -1.987 C6 KU2 22
KU2 C7 C23 C 0 1 N N N N N N 129.457 192.277 285.679 1.493 4.853 -1.104 C7 KU2 23
KU2 C8 C24 C 0 1 N N S N N N 129.042 193.449 284.779 1.567 3.763 -0.014 C8 KU2 24
KU2 C9 C25 C 0 1 N N N N N N 130.496 191.905 283.578 2.777 2.999 -1.932 C9 KU2 25
KU2 N1 N1 N 0 1 N N N N N N 130.966 194.916 284.411 -0.065 1.998 0.242 N1 KU2 26
KU2 N2 N2 N 0 1 N N N N N N 129.336 195.666 285.925 -0.759 4.177 0.684 N2 KU2 27
KU2 N3 N3 N 0 1 N N N N N N 133.231 195.117 282.980 -2.750 -0.472 0.593 N3 KU2 28
KU2 N4 N4 N 0 1 N N N N N N 129.364 192.851 283.469 2.372 2.658 -0.556 N4 KU2 29
KU2 O1 O1 O 0 1 N N N N N N 132.048 198.092 285.646 -3.534 1.849 1.212 O1 KU2 30
KU2 O2 O2 O 0 1 N N N N N N 129.645 197.671 286.955 -2.869 4.567 1.319 O2 KU2 31
KU2 O3 O3 O 0 1 N N N N N N 133.768 197.049 283.953 -0.576 -0.725 0.213 O3 KU2 32
KU2 O4 O4 O 0 1 N N N N N N 129.015 192.610 281.259 2.229 1.309 1.199 O4 KU2 33
KU2 O5 O5 O 0 1 N N N N N N 132.756 194.373 280.463 -5.089 -1.773 -0.524 O5 KU2 34
KU2 S1 S1 S 0 1 N N N N N N 127.216 195.157 281.171 3.955 -0.821 0.632 S1 KU2 35
KU2 CL1 CL1 CL 0 0 N N N N N N 126.642 197.562 283.166 4.973 -3.526 1.867 CL1 KU2 36
KU2 H1 H1 H 0 1 N N N N N N 134.660 195.016 279.924 -4.616 -3.289 0.798 H1 KU2 37
KU2 H2 H2 H 0 1 N N N N N N 133.525 196.306 280.446 -4.898 -1.691 1.531 H2 KU2 38
KU2 H3 H3 H 0 1 N N N N N N 131.111 199.081 282.197 7.719 -3.959 -2.101 H3 KU2 39
KU2 H4 H4 H 0 1 N N N N N N 129.906 195.518 280.203 5.281 -0.466 -1.894 H4 KU2 40
KU2 H5 H5 H 0 1 N N N N N N 131.598 197.239 280.655 6.940 -1.841 -3.083 H5 KU2 41
KU2 H6 H6 H 0 1 N N N N N N 130.023 194.041 276.034 -10.151 -2.847 -1.088 H6 KU2 42
KU2 H7 H7 H 0 1 N N N N N N 130.196 192.101 277.527 -8.904 -1.800 -2.934 H7 KU2 43
KU2 H8 H8 H 0 1 N N N N N N 131.491 192.255 279.618 -6.511 -1.289 -2.670 H8 KU2 44
KU2 H9 H9 H 0 1 N N N N N N 132.430 196.317 278.722 -6.613 -2.886 1.293 H9 KU2 45
KU2 H10 H10 H 0 1 N N N N N N 131.134 196.146 276.631 -9.006 -3.394 1.021 H10 KU2 46
KU2 H11 H11 H 0 1 N N N N N N 127.406 194.419 283.456 3.131 0.102 -1.433 H11 KU2 47
KU2 H12 H12 H 0 1 N N N N N N 126.527 193.228 282.438 4.541 1.003 -0.826 H12 KU2 48
KU2 H13 H13 H 0 1 N N N N N N 134.909 194.191 282.140 -2.468 -2.348 1.487 H13 KU2 49
KU2 H14 H14 H 0 1 N N N N N N 135.005 195.979 282.284 -2.545 -2.363 -0.291 H14 KU2 50
KU2 H15 H15 H 0 1 N N N N N N 128.920 199.216 283.305 6.847 -4.706 0.076 H15 KU2 51
KU2 H16 H16 H 0 1 N N N N N N 131.109 190.887 285.399 2.579 4.897 -3.008 H16 KU2 52
KU2 H17 H17 H 0 1 N N N N N N 131.578 192.619 285.324 3.634 4.980 -1.559 H17 KU2 53
KU2 H18 H18 H 0 1 N N N N N N 129.569 192.594 286.726 1.571 5.846 -0.661 H18 KU2 54
KU2 H19 H19 H 0 1 N N N N N N 128.734 191.450 285.622 0.574 4.761 -1.683 H19 KU2 55
KU2 H20 H20 H 0 1 N N N N N N 127.960 193.626 284.870 2.041 4.165 0.881 H20 KU2 56
KU2 H21 H21 H 0 1 N N N N N N 130.209 190.904 283.223 2.076 2.573 -2.650 H21 KU2 57
KU2 H22 H22 H 0 1 N N N N N N 131.364 192.262 283.005 3.787 2.642 -2.132 H22 KU2 58
KU2 H23 H23 H 0 1 N N N N N N 128.467 195.518 286.398 -0.532 5.119 0.731 H23 KU2 59
KU2 H24 H24 H 0 1 N N N N N N 132.622 194.324 282.981 -3.503 0.130 0.693 H24 KU2 60
KU2 H25 H25 H 0 1 N N N N N N 132.836 198.033 285.118 -4.171 2.529 1.469 H25 KU2 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KU2 C20 C25 DOUB Y N 1
KU2 C20 C21 SING Y N 2
KU2 C25 C24 SING Y N 3
KU2 C21 C22 DOUB Y N 4
KU2 C24 C23 DOUB Y N 5
KU2 C22 C23 SING Y N 6
KU2 C23 O5 SING N N 7
KU2 O5 C13 SING N N 8
KU2 C13 C12 SING N N 9
KU2 C18 C19 DOUB Y N 10
KU2 C18 C17 SING Y N 11
KU2 C19 C14 SING Y N 12
KU2 S1 C17 SING N N 13
KU2 S1 C11 SING N N 14
KU2 O4 C10 DOUB N N 15
KU2 C17 C16 DOUB Y N 16
KU2 C14 C15 DOUB Y N 17
KU2 C12 N3 SING N N 18
KU2 C10 C11 SING N N 19
KU2 C10 N4 SING N N 20
KU2 C16 C15 SING Y N 21
KU2 C16 CL1 SING N N 22
KU2 N3 C5 SING N N 23
KU2 N4 C9 SING N N 24
KU2 N4 C8 SING N N 25
KU2 C9 C6 SING N N 26
KU2 C5 O3 DOUB N N 27
KU2 C5 C2 SING N N 28
KU2 N1 C2 SING N N 29
KU2 N1 C1 DOUB N N 30
KU2 C2 C3 DOUB N N 31
KU2 C8 C1 SING N N 32
KU2 C8 C7 SING N N 33
KU2 C1 N2 SING N N 34
KU2 C6 C7 SING N N 35
KU2 C3 O1 SING N N 36
KU2 C3 C4 SING N N 37
KU2 N2 C4 SING N N 38
KU2 C4 O2 DOUB N N 39
KU2 C13 H1 SING N N 40
KU2 C13 H2 SING N N 41
KU2 C14 H3 SING N N 42
KU2 C18 H4 SING N N 43
KU2 C19 H5 SING N N 44
KU2 C20 H6 SING N N 45
KU2 C21 H7 SING N N 46
KU2 C22 H8 SING N N 47
KU2 C24 H9 SING N N 48
KU2 C25 H10 SING N N 49
KU2 C11 H11 SING N N 50
KU2 C11 H12 SING N N 51
KU2 C12 H13 SING N N 52
KU2 C12 H14 SING N N 53
KU2 C15 H15 SING N N 54
KU2 C6 H16 SING N N 55
KU2 C6 H17 SING N N 56
KU2 C7 H18 SING N N 57
KU2 C7 H19 SING N N 58
KU2 C8 H20 SING N N 59
KU2 C9 H21 SING N N 60
KU2 C9 H22 SING N N 61
KU2 N2 H23 SING N N 62
KU2 N3 H24 SING N N 63
KU2 O1 H25 SING N N 64
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KU2 SMILES ACDLabs 12.01 C(CSc1c(cccc1)Cl)(N4C(C=3NC(C(=C(C(=O)NCCOc2ccccc2)N=3)O)=O)CCC4)=O
KU2 InChI InChI 1.03 InChI=1S/C25H25ClN4O5S/c26-17-9-4-5-11-19(17)36-15-20(31)30-13-6-10-18(30)23-28-21(22(32)25(34)29-23)24(33)27-12-14-35-16-7-2-1-3-8-16/h1-5,7-9,11,18,32H,6,10,12-15H2,(H,27,33)(H,28,29,34)/t18-/m0/s1
KU2 InChIKey InChI 1.03 SAJTUABEFGSMCM-SFHVURJKSA-N
KU2 SMILES_CANONICAL CACTVS 3.385 OC1=C(N=C(NC1=O)[C@@H]2CCCN2C(=O)CSc3ccccc3Cl)C(=O)NCCOc4ccccc4
KU2 SMILES CACTVS 3.385 OC1=C(N=C(NC1=O)[CH]2CCCN2C(=O)CSc3ccccc3Cl)C(=O)NCCOc4ccccc4
KU2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1ccc(cc1)OCCNC(=O)C2=C(C(=O)NC(=N2)[C@@H]3CCCN3C(=O)CSc4ccccc4Cl)O
KU2 SMILES "OpenEye OEToolkits" 2.0.6 c1ccc(cc1)OCCNC(=O)C2=C(C(=O)NC(=N2)C3CCCN3C(=O)CSc4ccccc4Cl)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KU2 "SYSTEMATIC NAME" ACDLabs 12.01 2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-(2-phenoxyethyl)-1,6-dihydropyrimidine-4-carboxamide
KU2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 2-[(2~{S})-1-[2-(2-chlorophenyl)sulfanylethanoyl]pyrrolidin-2-yl]-5-oxidanyl-6-oxidanylidene-~{N}-(2-phenoxyethyl)-1~{H}-pyrimidine-4-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KU2 'Create component' 2017-06-27 RCSB
KU2 'Modify synonyms' 2017-07-12 RCSB
KU2 'Initial release' 2017-12-27 RCSB
KU2 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id KU2
_pdbx_chem_comp_synonyms.name SRI-30023
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id KU2
_pdbe_chem_comp_synonyms.name SRI-30023
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KU2 C10 C 18.972 -0.222 1
KU2 C13 C 8.196 -1.549 2
KU2 C14 C 24.990 3.099 3
KU2 C17 C 22.137 2.172 4
KU2 C18 C 22.449 3.639 5
KU2 C19 C 23.875 4.103 6
KU2 C20 C 3.000 -0.049 7
KU2 C21 C 3.000 -1.549 8
KU2 C22 C 4.299 -2.299 9
KU2 C24 C 5.598 -0.049 10
KU2 C25 C 4.299 0.701 11
KU2 C1 C 15.990 -1.549 12
KU2 C11 C 20.398 0.241 13
KU2 C12 C 9.495 -2.299 14
KU2 C15 C 24.678 1.632 15
KU2 C16 C 23.251 1.169 16
KU2 C2 C 13.392 -1.549 17
KU2 C23 C 5.598 -1.549 18
KU2 C3 C 13.392 -0.049 19
KU2 C4 C 14.691 0.701 20
KU2 C5 C 12.093 -2.299 21
KU2 C6 C 18.913 -4.103 22
KU2 C7 C 17.446 -3.791 23
KU2 C8 C 17.290 -2.299 24
KU2 C9 C 19.663 -2.804 25
KU2 N1 N 14.691 -2.299 26
KU2 N2 N 15.990 -0.049 27
KU2 N3 N 10.794 -1.549 28
KU2 N4 N 18.660 -1.689 29
KU2 O1 O 12.093 0.701 30
KU2 O2 O 14.691 2.201 31
KU2 O3 O 12.093 -3.799 32
KU2 O4 O 17.857 0.782 33
KU2 O5 O 6.897 -2.299 34
KU2 S1 S 20.710 1.709 35
KU2 CL1 Cl 22.939 -0.299 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KU2 C20 C25 DOUBLE NONE 1
KU2 C20 C21 SINGLE NONE 2
KU2 C25 C24 SINGLE NONE 3
KU2 C21 C22 DOUBLE NONE 4
KU2 C24 C23 DOUBLE NONE 5
KU2 C22 C23 SINGLE NONE 6
KU2 C23 O5 SINGLE NONE 7
KU2 O5 C13 SINGLE NONE 8
KU2 C13 C12 SINGLE NONE 9
KU2 C18 C19 SINGLE NONE 10
KU2 C18 C17 DOUBLE NONE 11
KU2 C19 C14 DOUBLE NONE 12
KU2 S1 C17 SINGLE NONE 13
KU2 S1 C11 SINGLE NONE 14
KU2 O4 C10 DOUBLE NONE 15
KU2 C17 C16 SINGLE NONE 16
KU2 C14 C15 SINGLE NONE 17
KU2 C12 N3 SINGLE NONE 18
KU2 C10 C11 SINGLE NONE 19
KU2 C10 N4 SINGLE NONE 20
KU2 C16 C15 DOUBLE NONE 21
KU2 C16 CL1 SINGLE NONE 22
KU2 N3 C5 SINGLE NONE 23
KU2 N4 C9 SINGLE NONE 24
KU2 N4 C8 SINGLE NONE 25
KU2 C9 C6 SINGLE NONE 26
KU2 C5 O3 DOUBLE NONE 27
KU2 C5 C2 SINGLE NONE 28
KU2 N1 C2 SINGLE NONE 29
KU2 N1 C1 DOUBLE NONE 30
KU2 C2 C3 DOUBLE NONE 31
KU2 C8 C1 SINGLE BEGINWEDGE 32
KU2 C8 C7 SINGLE NONE 33
KU2 C1 N2 SINGLE NONE 34
KU2 C6 C7 SINGLE NONE 35
KU2 C3 O1 SINGLE NONE 36
KU2 C3 C4 SINGLE NONE 37
KU2 N2 C4 SINGLE NONE 38
KU2 C4 O2 DOUBLE NONE 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KU2 MurckoScaffold S1 scaffold 'O=C(NCCOc1ccccc1)c1cc(=O)[nH]c([C@@H]2CCCN2C(=O)CSc2ccccc2)n1' InChI=1S/C25H26N4O4S/c30-22-16-20(25(32)26-13-15-33-18-8-3-1-4-9-18)27-24(28-22)21-12-7-14-29(21)23(31)17-34-19-10-5-2-6-11-19/h1-6,8-11,16,21H,7,12-15,17H2,(H,26,32)(H,27,28,30)/t21-/m0/s1 KQOZZBLJCOTFDW-NRFANRHFSA-N
KU2 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
KU2 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
KU2 pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KU2 C10 S1 1
KU2 C13 S1 1
KU2 C14 S1 1
KU2 C17 S1 1
KU2 C18 S1 1
KU2 C19 S1 1
KU2 C20 S1 1
KU2 C21 S1 1
KU2 C22 S1 1
KU2 C24 S1 1
KU2 C25 S1 1
KU2 C1 S1 1
KU2 C11 S1 1
KU2 C12 S1 1
KU2 C15 S1 1
KU2 C16 S1 1
KU2 C2 S1 1
KU2 C23 S1 1
KU2 C3 S1 1
KU2 C4 S1 1
KU2 C5 S1 1
KU2 C6 S1 1
KU2 C7 S1 1
KU2 C8 S1 1
KU2 C9 S1 1
KU2 N1 S1 1
KU2 N2 S1 1
KU2 N3 S1 1
KU2 N4 S1 1
KU2 O2 S1 1
KU2 O3 S1 1
KU2 O4 S1 1
KU2 O5 S1 1
KU2 S1 S1 1
KU2 N3 F1 1
KU2 C5 F1 1
KU2 O3 F1 1
KU2 C2 F1 1
KU2 N4 F1 2
KU2 C10 F1 2
KU2 O4 F1 2
KU2 C11 F1 2
KU2 C14 F2 1
KU2 C19 F2 1
KU2 C18 F2 1
KU2 C17 F2 1
KU2 C16 F2 1
KU2 C15 F2 1
KU2 C20 F2 2
KU2 C25 F2 2
KU2 C24 F2 2
KU2 C23 F2 2
KU2 C22 F2 2
KU2 C21 F2 2
KU2 C3 F3 1
KU2 C2 F3 1
KU2 N1 F3 1
KU2 C1 F3 1
KU2 N2 F3 1
KU2 C4 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KU2
_pdbe_chem_comp_rdkit_properties.exactmw 528.123
_pdbe_chem_comp_rdkit_properties.amw 529.018
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 61
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.280
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 251.719
_pdbe_chem_comp_rdkit_properties.tpsa 124.620
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.151
_pdbe_chem_comp_rdkit_properties.CrippenMR 135.583
_pdbe_chem_comp_rdkit_properties.chi0v 18.689
_pdbe_chem_comp_rdkit_properties.chi1v 10.279
_pdbe_chem_comp_rdkit_properties.chi2v 4.890
_pdbe_chem_comp_rdkit_properties.chi3v 4.890
_pdbe_chem_comp_rdkit_properties.chi4v 2.964
_pdbe_chem_comp_rdkit_properties.chi0n 42.116
_pdbe_chem_comp_rdkit_properties.chi1n 21.387
_pdbe_chem_comp_rdkit_properties.chi2n 3.708
_pdbe_chem_comp_rdkit_properties.chi3n 3.708
_pdbe_chem_comp_rdkit_properties.chi4n 2.230
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.500
_pdbe_chem_comp_rdkit_properties.kappa1 8.810
_pdbe_chem_comp_rdkit_properties.kappa2 11.959
_pdbe_chem_comp_rdkit_properties.kappa3 6.187
_pdbe_chem_comp_rdkit_properties.Phi 2.927
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KU2 UniChem PDBe KU2
KU2 UniChem PubChem 135567349
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KU2 C10 -3.465 2.304 0.578 ETKDGv3 1
KU2 C13 3.623 -2.379 -1.047 ETKDGv3 2
KU2 C14 -4.711 -2.171 2.921 ETKDGv3 3
KU2 C17 -3.923 -0.833 0.564 ETKDGv3 4
KU2 C18 -5.147 -1.374 0.658 ETKDGv3 5
KU2 C19 -5.561 -2.068 1.894 ETKDGv3 6
KU2 C20 6.332 -2.553 3.422 ETKDGv3 7
KU2 C21 6.604 -3.788 2.661 ETKDGv3 8
KU2 C22 6.043 -3.973 1.459 ETKDGv3 9
KU2 C24 4.904 -1.817 1.583 ETKDGv3 10
KU2 C25 5.525 -1.617 2.910 ETKDGv3 11
KU2 C1 -1.222 2.405 -1.745 ETKDGv3 12
KU2 C11 -4.214 1.609 -0.525 ETKDGv3 13
KU2 C12 2.237 -2.562 -0.423 ETKDGv3 14
KU2 C15 -3.354 -1.597 2.819 ETKDGv3 15
KU2 C16 -2.971 -0.965 1.700 ETKDGv3 16
KU2 C2 0.262 0.498 -1.782 ETKDGv3 17
KU2 C23 5.144 -2.946 0.883 ETKDGv3 18
KU2 C3 0.016 0.229 -3.080 ETKDGv3 19
KU2 C4 -0.940 1.083 -3.807 ETKDGv3 20
KU2 C5 1.185 -0.319 -0.970 ETKDGv3 21
KU2 C6 -0.382 4.459 0.723 ETKDGv3 22
KU2 C7 -0.823 4.655 -0.724 ETKDGv3 23
KU2 C8 -1.848 3.552 -0.995 ETKDGv3 24
KU2 C9 -1.515 3.699 1.399 ETKDGv3 25
KU2 N1 -0.367 1.626 -1.145 ETKDGv3 26
KU2 N2 -1.553 2.174 -3.120 ETKDGv3 27
KU2 N3 1.250 -1.745 -1.125 ETKDGv3 28
KU2 N4 -2.302 3.119 0.322 ETKDGv3 29
KU2 O1 0.671 -0.814 -3.736 ETKDGv3 30
KU2 O2 -1.215 0.863 -5.017 ETKDGv3 31
KU2 O3 1.878 0.248 -0.082 ETKDGv3 32
KU2 O4 -3.855 2.139 1.765 ETKDGv3 33
KU2 O5 4.586 -3.197 -0.382 ETKDGv3 34
KU2 S1 -3.441 0.008 -0.952 ETKDGv3 35
KU2 CL1 -1.338 -0.320 1.597 ETKDGv3 36
KU2 H1 3.574 -2.695 -2.110 ETKDGv3 37
KU2 H2 3.939 -1.314 -1.036 ETKDGv3 38
KU2 H3 -5.013 -2.679 3.828 ETKDGv3 39
KU2 H4 -5.845 -1.297 -0.166 ETKDGv3 40
KU2 H5 -6.555 -2.492 1.966 ETKDGv3 41
KU2 H6 6.787 -2.407 4.393 ETKDGv3 42
KU2 H7 7.259 -4.543 3.076 ETKDGv3 43
KU2 H8 6.245 -4.880 0.905 ETKDGv3 44
KU2 H9 4.263 -1.036 1.201 ETKDGv3 45
KU2 H10 5.325 -0.710 3.466 ETKDGv3 46
KU2 H11 -5.269 1.443 -0.219 ETKDGv3 47
KU2 H12 -4.242 2.243 -1.433 ETKDGv3 48
KU2 H13 2.246 -2.294 0.654 ETKDGv3 49
KU2 H14 1.949 -3.633 -0.501 ETKDGv3 50
KU2 H15 -2.670 -1.700 3.652 ETKDGv3 51
KU2 H16 0.545 3.845 0.747 ETKDGv3 52
KU2 H17 -0.189 5.433 1.224 ETKDGv3 53
KU2 H18 0.045 4.626 -1.420 ETKDGv3 54
KU2 H19 -1.317 5.647 -0.820 ETKDGv3 55
KU2 H20 -2.699 3.979 -1.570 ETKDGv3 56
KU2 H21 -1.113 2.900 2.058 ETKDGv3 57
KU2 H22 -2.149 4.395 1.991 ETKDGv3 58
KU2 H23 -2.234 2.792 -3.616 ETKDGv3 59
KU2 H24 0.505 -2.236 -1.670 ETKDGv3 60
KU2 H25 0.501 -1.021 -4.713 ETKDGv3 61
#